Skip to main content
Molecules logoLink to Molecules
. 2022 Apr 29;27(9):2829. doi: 10.3390/molecules27092829

Chemical Diversity and Potential Target Network of Woody Peony Flower Essential Oil from Eleven Representative Cultivars (Paeonia × suffruticosa Andr.)

Gaoming Lei 1,*, Chaoying Song 1, Xinyue Wen 1, Guoyu Gao 1, Yanjie Qi 1
Editors: Antoni Szumny1, Henryk H Jeleń1, Monica Rosa Loizzo1
PMCID: PMC9102020  PMID: 35566179

Abstract

Woody peony (Paeonia × suffruticosa Andr.) has many cultivars with genetic variances. The flower essential oil is valued in cosmetics and fragrances. This study was to investigate the chemical diversity of essential oils of eleven representative cultivars and their potential target network. Hydro-distillation afforded yields of 0.11–0.25%. Essential oils were analyzed by GC-MS and GC-FID which identified 105 compounds. Three clusters emerged from multivariate analysis, representative of phloroglucinol trimethyl ether (‘Caihui’), citronellol (‘Jingyu’, ‘Zhaofen’ and ‘Baiyuan Zhenghui’) and mixed (the rest of the cultivars) chemotypes. ‘Zhaofen’ and ‘Jingyu’ also exhibited low levels of other rose-related compounds. The main components were subjected to a target network approach. Drug-likeness screening gave 20 compounds with predictive blood–brain barrier permeation. Compound target network identified six key compounds, namely nerol, citronellol, geraniol, geranic acid, cis-3-hexen-1-ol and 1-hexanol. Top enriched terms in GO, KEGG and DisGeNET were mostly related to the central nervous system (CNS). Protein—protein interactions revealed a core network of 14 targets, 11 of which were CNS-related (targets for antidepressants, analgesics, antipsychotics, anti-Alzheimer’s and anti-Parkinson’s agents). This work provides useful information on the production of woody peony essential oils with specific chemotypes and reveals their potential importance in aromatherapy for alternative treatment of CNS disorders.

Keywords: chemical diversity, essential oil, woody peony cultivar (Paeonia × suffruticosa Andr.), potential target network, enrichment analysis, central nervous system

1. Introduction

Woody peony is a shrub in section Moutan DC., genus Paeonia L., family Paeoniaceae (synonymously subfamily Paeonioideae in family Ranunculaceae). The cultivated species of the woody peony mainly refers to Paeonia × suffruticosa Andr. The plant height ranges from 0.5 to 2 m. It has alternate leaves, with a mostly bi-ternate compound leaf. The flower is solitary, terminal and double. The petal is obovate with various colors such as white, pink, red, purplish red, purple, dark purple or green. The flowering period is from April to May, and the fruiting period is from August to September. This species has a long history of cultivation in China and is planted countrywide, especially in the Central Plains region. The number of cultivars is up to hundreds of, or nearly one thousand, cultivars. Its flower is known as the national flower of China. It is also cultivated worldwide, especially in Japan, France, Britain and America [1,2].

The flower of the woody peony has long been used in traditional Chinese medicine, mainly for the treatment of irregular menstruation and menstrual abdominal pain [3]. The essential oil of the woody peony flower is especially valuable, which is used in cosmetics and fragrances. Zhang et al. [4] analyzed P. × suffruticosa petal essential oil obtained by microwave-assisted steam distillation, and found it contained tetracosane, hexacosane and docosane, and low levels of α-terpineol, geraniol and linalool. In a study using GC × GC coupled with TOF-MS, the petal essential oils of two woody peony cultivars were characterized by alcohols, aldehydes, alkanes, terpenes and acids [5]. Han and Bhat [6] found that P. × suffruticosa flower bud essential oil contained high levels of alkanes and low levels of alcohols, ketones and benzenoids, which showed an antimicrobial effect against food-borne bacteria. In another study, supercritical extraction from the petals of eleven P. × suffruticosa cultivars afforded (Z)-5-dodecenyl acetate, nonadecane, ethyl linoleate, (Z)-5-nonadecene, heneicosane and linalool oxide as the main components with varied contents. Moreover, the essential oils of some cultivars showed antioxidant activities [7]. Our previous studies mainly focused on the flower hydrolate extracts of some P. × suffruticosa cultivars, which revealed the predominance of benzene ethanol, phloroglucinol trimethyl ether, citronellol + geraniol or a balance of these types of compounds in different cultivars [8,9].

The chemical diversity of plant essential oils depends on geographical or ecological factors [10], genotypes [11,12], harvest, post-harvest and extraction methods [13,14]. The genotype is the major factor that determines the chemical type. The chemical type further determines specific pharmacological effects and aromatherapy applications. Active essential oil compounds work through interactions with related targets in the human body. Moreover, there might be a network of targets for the complex mixture of compounds such as essential oils [15,16,17].

Up to now, studies on the chemical diversity of woody peony flower essential oils, especially those utilizing multivariate analyses, are rather limited. Given that P. × suffruticosa has many cultivars with genetic variances, relevant studies are needed. Moreover, there are no reports on the potential target network of the woody peony flower essential oils. The network study of target proteins is important for giving insight into the in vivo mechanisms of essential oils. Therefore, the objectives of this work were to investigate the chemical diversity of the flower essential oils of eleven representative woody peony cultivars, and to further reveal the potential target network of the essential oil components.

2. Results

2.1. Hydro-Distillation Yields of the Essential Oils of Woody Peony Flowers

The flowers of the eleven woody peony cultivars are shown in Figure 1. The flower colors varied considerably. Notably, the ‘Jingyu’ flowers presented white, and ‘Wujin Yaohui’ presented dark purplish red. ‘Erqiao’ presented purplish red and pink in one flower, or in some other cases, in one plant.

Figure 1.

Figure 1

Photographs of flowers of the eleven woody peony cultivars (Paeonia × suffruticosa Andr.).

Hydro-distillation of the fresh flowers afforded essential oil yields of 0.11–0.25% (w/w, on dry basis) from the eleven cultivars (Table 1). Results of analysis of variance (ANOVA) showed that the essential oil yield was influenced by the factor of woody peony cultivar (p < 0.05). The post-hoc test which utilized Tukey’s method for multiple comparisons suggested that the yield values basically fell into two groups overlapping partially. The yield from ‘Taohong Feicui’ belonging to group A was relatively high, whereas those from ‘Jingyu’, ‘Wujin Yaohui’, ‘Zhaofen’, and ‘Fugui Mantang’ belonging to group B was relatively low.

Table 1.

Hydro-distillation yields of flower essential oils of the eleven woody peony cultivars (Paeonia × suffruticosa Andr.).

Cultivar Name Cultivar Name Translated Code Specimen No. EO Yield (w/w%) a
‘Fugui Mantang’ Full of wealth and rank FGMT PS190412-01 0.14 ± 0.05 B
‘Wujin Yaohui’ Dark gold that glitters WJYH PS190412-02 0.13 ± 0.02 B
‘Caihui’ Colorful painting CH PS190412-03 0.17 ± 0.03 A,B
‘Baiyuan Zhenghui’ Competing for shining in the great flower garden BYZH PS190412-04 0.17 ± 0.04 A,B
‘Erqiao’ Two distinct beauties EQ PS190412-05 0.18 ± 0.05 A,B
‘Jingyu’ In honor of Horticulturist Jingyu Sun JY PS190412-06 0.11 ± 0.01 B
‘Lan Baoshi’ Blue gems LBS PS190412-07 0.19 ± 0.06 A,B
‘Hong Baoshi’ Red gems HBS PS190412-08 0.16 ± 0.02 A,B
‘Taohong Feicui’ Peach red with flying emerald green THFC PS190412-09 0.25 ± 0.04 A
‘Zhaofen’ Pink flowers from Zhao (horticulturist in Qing Dynasty) ZF PS190412-10 0.13 ± 0.02 B
‘Manjiang Hong’ Red floating plants all over the river MJH PS190412-11 0.16 ± 0.03 A,B

a Yield of flower essential oil (w/w% on dry basis) presented as mean value with standard deviation of triplicate distillations. Values that did not share a capital letter were significantly different according to the ANOVA with Tukey’s method (p < 0.05).

2.2. Comparative Chemical Composition of the Flower Essential Oils

Typical gas chromatograms of the essential oils of the eleven cultivars are given in Figure 2. A total of 105 compounds were identified, which accounted for 98.7–99.7% of total composition (Table 2). For individual cultivars, the compound numbers varied from 47 (‘Baiyuan Zhenghui’, ‘Zhaofen’ and ‘Manjiang Hong’) to 63 (‘Jingyu’). The essential oil components belong to alkanes, alkenes, terpenes, aliphatic alcohols, aliphatic aldehydes, benzoids, other oxygenated non-terpenes, terpene alcohols and other oxygenated terpenes (Figure 3).

Figure 2.

Figure 2

Typical gas chromatograms of flower essential oils of the eleven woody peony cultivars (Paeonia × suffruticosa Andr.). The main chromatographic peaks are noted with numbers. The numbering of essential oil components is specified in Table 2. Their identification was based on mass spectra and retention indices.

Table 2.

Chemical composition of flower essential oils of the eleven woody peony cultivars (Paeonia × suffruticosa Andr.).

No. RIdet a RIref b Compound c FGMT d WJYH CH BYZH EQ JY LBS HBS THFC ZF MJH
1 - 800 Octane 0.1 0.1 0.7 0.1 0.6 2.3 0.6 0.4 0.9 0.3 1.3
2 802 801 Hexanal 0.2 0.3 - 0.3 0.4 - 1.0 1.0 0.9 0.3 1.2
3 852 854 trans-2-Hexenal - - - - - 0.2 - 0.2 - - -
4 860 858 cis-3-Hexen-1-ol 1.4 2.1 2.3 2.9 3.2 4.2 1.2 4.0 1.9 1.7 1.5
5 870 868 1,4-Dimethylbenzene 0.1 - - 0.2 0.2 - - 0.3 tr 0.1 0.1
6 873 871 1-Hexanol 1.7 3.7 2.1 2.9 2.5 2.9 0.7 3.6 1.0 1.2 0.9
7 882 882 2,6-Dimethyl-1,5-heptadiene 0.3 - - 0.4 - 0.8 0.3 - - 0.3 -
8 899 900 Nonane - - - - - 0.2 - - - - -
9 903 902 Heptanal - - 0.2 - 0.1 0.5 0.2 0.2 - - 0.3
10 931 932 α-Pinene 0.2 - - - - 0.5 0.2 - - - -
11 989 989 Prenylacetone 0.3 - - 0.3 - 0.4 - - - - -
12 992 993 2-Pentylfuran - - - - - - - - 0.3 - -
13 1005 1004 Octanal - - - - - 0.2 - - - - -
14 1038 1037 cis-β-Ocimene - - - tr - - - - - - -
15 1049 1048 trans-β-Ocimene 0.3 - - 6.7 - - - - - - -
16 1050 1046 Benzeneacetaldehyde - - - - - - - tr - - -
17 1075 1074 cis-Linalool oxide furan 1.2 0.2 2.0 1.5 - 1.6 0.7 1.1 1.2 - 0.4
18 1091 1088 trans-Linalool oxide furan 0.5 - 1.0 0.7 - 0.7 0.3 0.6 0.5 - -
19 1099 1100 Undecane - 0.3 0.4 0.5 0.7 0.2 - 0.2 - - 0.2
20 1107 1104 Nonanal - - - - 3.2 7.2 4.8 3.8 5.4 1.8 6.4
21 1108 1106 Linalool 1.9 1.6 3.1 1.8 - - - - - - -
22 1113 1111 cis-Rose oxide - - - - - 1.3 - - - 0.7 -
23 1128 1127 trans-Rose oxide - - - - - 0.4 - - - 0.3 -
24 1130 1127 Benzeneethanol - - - - - - - 4.0 0.4 - -
25 1164 1160 cis-3-Nonen-1-ol - - - - - - - - 0.4 - -
26 1171 1170 Hydroquinone dimethyl ether 4.1 2.7 0.4 - 2.5 - - - - 0.2 -
27 1181 1176 1-Nonanol - - - - 0.5 0.9 - - - - -
28 1184 1180 Myrtanal - - - - - - - 0.3 0.8 - -
29 1199 1200 Dodecane - 0.5 - - 0.2 - - - - - -
30 1202 1201 α-Terpineol 0.3 - 0.8 0.7 - 0.3 0.7 0.6 0.3 - -
31 1208 1208 Decanal - - - - - 0.3 - - - - -
32 1221 1220 4,7-Dimethylbenzofuran 0.4 0.6 0.5 0.6 1.5 0.7 0.9 0.6 1.0 0.6 0.7
33 1237 1230 Nerol - 0.9 2.5 - - - 3.6 4.2 2.5 - -
34 1239 1231 Citronellol 7.9 - - 21.6 - 23.1 - - - 25.8 2.2
35 1246 1240 Neral 1.2 - - - - - - - - - -
36 1264 1256 Geraniol 13.0 2.2 2.4 3.0 - 5.6 1.7 3.9 4.2 - 0.7
37 1276 1270 Geranial 1.4 - - 0.8 - 0.2 - - - - -
38 1283 1275 1-Decanol - - - - 0.4 - - - - - -
39 1299 1300 Tridecane 0.3 0.9 0.2 0.8 0.5 0.2 0.2 0.6 0.6 0.3 0.6
40 1327 1326 Geranic acid methyl ester - - - - - 0.2 - - - - -
41 1355 1354 Citronellyl acetate - - - - - 1.0 - - - 3.9 1.4
42 1386 1383 Geranyl acetate - - - - - 0.3 - - - - -
43 1391 1385 trans-3-Tetradecene - - - - 0.2 - - - - - -
44 1396 1393 Geranic acid 0.8 - - 1.4 - - 3.5 1.0 - 0.3 -
45 1399 1400 Tetradecane 1.3 1.1 0.7 1.6 0.9 - 2.2 2.0 0.4 0.8 1.4
46 1414 1407 Eugenol methyl ether - - 0.2 - - - - - - - -
47 1423 1418 Phloroglucinol trimethyl ether 0.4 1.2 36.8 - 0.3 7.3 9.9 0.8 12.9 15.6 -
48 1457 1455 Geranyl acetone - - 0.1 - 0.2 0.4 0.2 - 0.3 0.2 0.3
49 1461 1462 2,6,10-Trimethyltridecane 0.3 0.4 0.5 0.2 1.0 1.0 0.9 0.3 0.8 1.1 1.2
50 1476 1475 1,14-Pentadecadiene * - 0.2 - - - - - - - - -
51 1483 1481 Germacrene D 2.2 0.6 0.3 10.5 2.1 - 1.6 0.9 4.1 - 0.4
52 1484 1485 Citronellyl isobutyrate - - - - - - - - - 0.4 -
53 1500 1500 Pentadecane 10.1 11.1 2.7 2.5 7.1 1.9 2.3 13.2 9.0 3.6 12.8
54 1510 1508 α-Farnesene - - 2.4 0.6 2.1 0.6 0.2 - - 1.6 1.0
55 1526 1524 δ-Cadinene - - - 0.4 - - - - - - -
56 1570 1570 3-Methylpentadecane - 0.8 - - - - - - - - -
57 1571 1570 cis-9-Tridecen-1-ol * 0.4 - - - 0.3 - - 0.7 0.3 - 0.6
58 1572 1572 Citronellyl 2-methylbutanoate - - - - - - - - - 0.7 -
59 1575 1577 1,15-Hexadecadiene * - 0.2 - - 0.2 - - 0.4 - - 0.3
60 1577 1577 Citronellyl 3-methylbutanoate - - - - - - - - - 0.8 -
61 1578 1579 cis-3-Hexadecene 0.2 0.3 - - 0.2 - - 0.3 - - -
62 1578 1580 cis-3-Hexenyl benzoate - - - - - 0.1 - - - - 0.5
63 1599 1600 Hexadecane 0.4 0.6 1.2 - 1.3 0.1 0.2 0.5 0.3 1.8 1.5
64 1654 1651 τ-Muurolol - - - 0.6 - - - - - - -
65 1663 1665 2-Methylhexadecane 0.6 1.6 0.7 - 1.0 0.3 0.7 0.6 0.4 0.7 0.9
66 1669 1667 6,9-Heptadecadiene 9.0 15.5 0.8 - 3.2 1.2 1.1 12.4 6.4 1.4 6.1
67 1676 1676 trans-8-Heptadecene 3.8 4.9 0.4 0.3 1.1 0.6 0.4 4.0 2.0 0.7 1.9
68 1700 1700 Heptadecane 4.2 7.3 5.2 0.9 10.1 5.1 6.2 3.3 3.2 5.2 9.3
69 1713 1714 2-Pentadecanol - 0.8 - - 0.2 - - - - - -
70 1770 1770 3-Methylheptadecane 0.1 0.8 0.2 - 0.7 0.4 0.4 - - 0.3 0.6
71 1799 1800 Octadecane 0.3 0.3 1.4 - 0.7 0.3 0.5 0.3 1.1 0.7 0.7
72 1814 1812 2-Hexadecanol - 0.2 - - - - - - - - -
73 1820 1819 Hexadecanal - - - - - 0.1 - - - - -
74 1848 1845 Hexahydrofarnesyl acetone - 0.3 0.2 - 0.6 0.4 0.5 - 0.5 0.6 0.7
75 1863 1864 2-Methyloctadecane - 0.3 - - 0.3 0.1 - - - - -
76 1873 1874 9-Nonadecene 0.4 0.7 0.5 - 0.3 1.2 0.2 1.7 0.3 0.4 0.8
77 1879 1879 1,18-Nonadecadiene * - 1.4 - - - - - - - - -
78 1889 1892 1-Nonadecene - 1.2 - - - - - - - - -
79 1900 1900 Nonadecane 4.5 5.4 5.2 1.6 12.4 7.4 13.3 5.2 3.8 1.5 12.6
80 1915 1909 2-Heptadecanol - 1.2 - - 0.5 - 0.2 - - - -
81 1917 1920 Heptadecanal 0.2 - - - - - - 0.2 - - -
82 1922 1919 Farnesyl acetone - - - - - 0.3 - 0.2 0.3 - -
83 1971 1972 3-Methylnonadecane 0.3 0.6 0.2 0.2 0.7 0.4 0.5 0.2 0.2 - 0.5
84 1992 1984 Hexadecanoic acid - - - - 0.3 - - 0.2 0.3 - -
85 1999 2000 Eicosane 0.2 0.2 0.4 0.3 0.4 0.3 0.5 0.3 0.8 0.2 0.2
86 2027 2024 Octadecanal - - - - - 0.4 - - - - -
87 2066 2069 Linoleyl alcohol - 0.4 - - - - - - - - -
88 2067 2064 2-Methyleicosane 0.2 - - 0.2 0.2 - - 0.2 0.2 - -
89 2075 2080 1-Octadecanol - - - - - - - 0.2 - - -
90 2100 2100 Heneicosane 3.9 2.1 1.9 4.6 3.9 2.2 5.5 3.9 4.3 0.8 3.3
91 2174 2172 3-Methylheneicosane 0.4 0.3 0.1 0.8 0.4 0.2 0.5 0.4 0.4 - 0.4
92 2199 2200 Docosane 0.9 0.5 1.0 1.3 0.7 0.4 1.3 0.7 1.5 0.7 0.5
93 2230 2229 Eicosanal - - - - - 0.2 - - - - -
94 2262 2264 2-Methyldocosane 0.4 0.3 0.2 0.8 0.4 0.1 0.4 0.2 0.2 0.2 0.2
95 2272 2273 1-Eicosanol - - 0.1 0.2 - 0.1 - 0.2 - - -
96 2300 2300 Tricosane 9.4 9.1 8.6 13.1 12.3 4.8 14.3 7.5 10.8 8.6 11.7
97 2370 2372 3-Methyltricosane 1.1 1.6 0.9 2.0 1.8 0.4 1.9 0.8 0.8 0.9 1.4
98 2399 2400 Tetracosane 0.8 0.8 1.2 1.0 1.2 0.5 1.4 0.6 1.3 1.3 0.9
99 2459 2462 2-Methyltetracosane 0.2 0.4 0.2 0.4 0.4 0.1 0.3 0.1 0.3 0.3 0.2
100 2500 2500 Pentacosane 3.5 4.1 4.6 4.8 7.9 2.6 7.3 3.3 5.7 6.1 5.7
101 2570 2572 3-Methylpentacosane 0.6 1.6 0.8 0.9 2.2 0.4 1.4 0.5 0.8 1.3 1.1
102 2599 2600 Hexacosane 0.2 0.2 0.2 0.2 0.4 0.1 0.4 0.2 0.4 0.4 -
103 2659 2663 2-Methylhexacosane - 0.2 - - - - - - 0.3 - -
104 2699 2700 Heptacosane 1.1 1.4 0.8 1.3 2.0 0.5 1.9 1.2 2.0 1.8 1.4
105 2770 2772 3-Methylheptacosane 0.4 0.9 0.2 0.4 0.7 - 0.5 0.4 0.8 0.5 0.4
Sum 99.6 99.2 99.5 98.9 99.4 98.9 99.7 98.7 99.5 99.0 99.4

a RIdet, retention index determined relative to C7–C30 saturated alkanes run under identical chromatographic conditions; b RIref, reference retention index retrieved from online databases of NIST Chemistry WebBook [18] (https://webbook.nist.gov/chemistry/, accessed on 20 March 2021) and ChemSpider [19] (https://www.chemspider.com/, accessed on 21 March 2021). Certain RIref values were retrieved from our previous studies [8,9]; c Compounds identified by mass spectra and retention indices; d Code for cultivar name, see Table 1. Percentages of individual components are presented as mean value of triplicate samples (RSD basically below 10% for major components); tr, trace, percentages lower than 0.05%; -, not detected; * Compounds tentatively identified.

Figure 3.

Figure 3

Group chemical components of flower essential oils of the eleven woody peony cultivars (Paeonia × suffruticosa Andr.).

The alkanes included tricosane, nonadecane, pentadecane, heptadecane, pentacosane and heneicosane, which were present in all the essential oils with varied percentages. Particularly, ‘Erqiao’, ‘Manjiang Hong’ and ‘Lan Baoshi’ essential oils contained alkanes at 65.6–73.1%. Interestingly, almost all of the major alkanes possessed an odd number of carbons, whereas alkanes having an even number of carbons were minor components (<2.5%). Branched alkanes were also found in the present study. Interestingly, the methyl was almost always attached to position 2 of the n-alkane main chain with the even carbon numbers (2-methylhexadecane, for example), and position 3 of the n-alkane main chain with the odd carbon numbers (3-methyltricosane, for example).

As for the alkenes, the essential oils of ‘Wujin Yaohui’ and ‘Hong Baoshi’ contained medium levels of this class (24.4% and 18.8%, respectively), mainly represented by 6,9-heptadecadiene (15.5% and 12.4%, respectively) and trans-8-heptadecene (4.9% and 4.0%, respectively). It was noted that the two cultivars possessed balanced ratios of alkane to alkene (2.3:1 and 2.5:1, respectively), while most of the others possessed larger ratios of alkane to alkene (for ‘Baiyuan Zhenghui’, it reached 57.9:1).

Terpene hydrocarbons were basically at low percentages. Only ‘Baiyuan Zhenghui’ essential oil presented a medium content (18.2%), which was mainly attributed to germacrene D (10.5%) and trans-β-ocimene (6.7%). In contrast, the percentages of germacrene D and trans-β-ocimene were much lower or not detected in other cultivars. In a recent report, the essential oil of Pogostemon plectranthoides from India presents chemotype of trans-β-ocimene—germacrene D—trans-β-guaiene [20]. High levels of germacrene D are usually accompanied by cadinane and muurolane sesquiterpenoids [21]. Interestingly, δ-cadinene and τ-muurolol were uniquely present in ‘Baiyuan Zhenghui’ essential oil.

Oxygenated non-terpenes possessed more variance in percentages. ‘Caihui’ contained the highest level of benzoids (37.9%), which was followed by ‘Zhaofen’ (16.5%) and ‘Taohong Feicui’ (14.3%). This was mainly attributed to phloroglucinol trimethyl ether, hydroquinone dimethyl ether and 4,7-dimethylbenzofuran. Distinctly, ‘Hong Baoshi’ contained benzeneethanol (4.0%). As for aliphatic alcohols (2.1–8.7%), the main components were cis-3-hexen-1-ol (1.2–4.2%) and 1-hexanol (0.7–3.7%) which were present in all of the essential oils. Other minor ones were cis-9-tridecen-1-ol, 2-heptadecanol, 1-eicosanol, 1-nonanol, 2-pentadecanol, 1-decanol (only in ‘Erqiao’), cis-3-nonen-1-ol (only ‘Taohong Feicui’), 2-hexadecanol (only ‘Wujin Yaohui’) and 1-octadecanol (only ‘Hong Baoshi’). As for aliphatic aldehydes (0.2–9.1%), nonanal was the main component.

Terpene alcohols occurred mainly in the essential oils of ‘Jingyu’, ‘Fugui Mantang’, ‘Baiyuan Zhenghui’ and ‘Zhaofen’ (24.8–31.3%), most of which were monoterpene alcohols. In particular, citronellol was mainly in the essential oils of ‘Zhaofen’ (25.8%), ‘Jingyu’ (23.1%) and ‘Baiyuan Zhenghui’ (21.6%). Geraniol was mainly in ‘Fugui Mantang’ (13.0%). Other terpene alcohols were nerol, cis-linalool oxide furan, trans-linalool oxide furan, linalool, α-terpineol and τ-muurolol. Terpene alcohols are valued for they play an important role in the quality profile of essential oils [22].

Other oxygenated terpenes included terpene esters, oxides, aldehydes, ketones, acids and derivatives, which occurred at relatively low levels. Citronellyl acetate occurred in the essential oils of ‘Zhaofen’ (3.9%), ‘Manjiang Hong’ (1.4%) and ‘Jingyu’ (1.0%). Some other citronellyl esters, namely citronellyl isobutyrate, citronellyl 2-methylbutanoate and citronellyl 3-methylbutanoate, occurred uniquely in the ‘Zhaofen’ essential oil (all < 1.0%). One of the reasons for the low level of esters and high level of alcohols might be hydrolysis that possibly occurred during hydro-distillation [23]. The cis-rose oxide and trans-rose oxide occurred only in ‘Jingyu’ (1.3% and 0.4%, respectively) and ‘Zhaofen’ (0.7% and 0.3%, respectively). Neral and geranial coexisted in ‘Fugui Mantang’ (1.2% and 1.4%, respectively), to which neral was unique. Prenylacetone, geranyl acetone, hexahydrofarnesyl acetone and farnesyl acetone were all at low levels (<1.0%). Geranic acid mainly occurred in the essential oils of ‘Lan Baoshi’ (3.5%), ‘Baiyuan Zhenghui’ (1.4%) and ‘Hong Baoshi’ (1.0%). It was noted that most of the oxygenated terpenes belonged to acyclic types, indicating that the terpene biosynthesis remained at initial steps of biosynthetic pathway.

2.3. Multivariate Analysis Results

The hierarchical cluster analysis (HCA) dendrogram clearly assigned the essential oils into three clusters (Figure 4). Cluster I only consisted of ‘Caihui’, which was distinct from others. Cluster II consisted of ‘Baiyuan Zhenghui’, ‘Jingyu’ and ‘Zhaofen’. Cluster III consisted of the rest of the cultivars.

Figure 4.

Figure 4

Dendrogram from HCA of flower essential oils of the eleven woody peony cultivars (Paeonia × suffruticosa Andr.). Clustering is based on similarity under Ward linkage and squared Euclidean distance. For codes of cultivar names, see Table 1.

As for principal component analysis (PCA) (Figure 5), the chemical variance was presented with the first two principal components, which in sum explained 74.1% of the total variance (PC1 39.8%, PC2 34.3%). PCA was generally consistent with HCA in the sample grouping. It gave further information on the correlation of each cluster with corresponding characteristic compounds. Cluster I consisting of ‘Caihui’ was located at the lower left corner. It was highly correlated with phloroglucinol trimethyl ether. Cluster II consisting of ‘Jingyu’, ‘Zhaofen’ and ‘Baiyuan Zhenghui’ was located at the upper left corner. This cluster was correlated with citronellol. Interestingly, ‘Zhaofen’ and ‘Jingyu’ exhibited not only high levels of citronellol but also low levels of other rose-related aroma compounds (citronellyl esters, cis-rose oxide and trans-rose oxide). Therefore, they might serve as alternatives to rose-type essential oils. Cluster III consisting of the rest of cultivars was somewhat diverse. ‘Fugui Mantang’ located at the upper right corner was mainly correlated with geraniol, hydroquinone dimethyl ether and trans-8-heptadecene. ‘Lan Baoshi’ and ‘Taohong Feicui’ were correlated with phloroglucinol trimethyl ether, nonadecane and nerol. Others were correlated with pentadecane, 6,9-heptadecadiene, nonadecane and pentadecane.

Figure 5.

Figure 5

Score and loading plots from PCA of flower essential oils of the eleven woody peony cultivars (Paeonia × suffruticosa Andr.). Plots are presented along the first two principal components (74.1% of total variance). For codes of cultivar names, see Table 1.

2.4. Target Network Characteristics

Altogether 45 essential oil compounds were retained after excluding those lower than 1.0% in all samples. Further, drug-likeness screening afforded 20 compounds with zero violation to Lipinski’s rule (Table S1 in Supplementary Materials). Interestingly, all the 20 compounds showed predictive blood–brain barrier (BBB) permeation. They were all oxygenated compounds, except trans-β-ocimene which is a monoterpene hydrocarbon. Specifically, they were oxygenated benzoids (phloroglucinol trimethyl ether, hydroquinone dimethyl ether, 4,7-dimethylbenzofuran and benzeneethanol), short chain aliphatic alcohols and aldehydes (cis-3-hexen-1-ol, 1-hexanol, nonanal and hexanal), terpene alcohols (citronellol, geraniol, cis-linalool oxide furan, trans-linalool oxide furan, nerol and linalool) and other oxygenated terpenes (citronellyl acetate, geranic acid, cis-rose oxide, geranial and neral).

Target prediction for the 20 compounds afforded 190 potential targets (Table S2 in Supplementary Materials). The compound target network consisted of 210 nodes (compounds and targets) and 420 edges (compound target connections) (Figure 6). The top ranked compounds were nerol, citronellol, geraniol, geranic acid, cis-3-hexen-1-ol and 1-hexanol, which were the most important in the network (Table 3). They also constituted the major components of the essential oils.

Figure 6.

Figure 6

Compound target network of 20 essential oil compounds of woody peony flowers and 190 potential targets. Compounds are represented by green diamonds noted with numbers (see Table 2). Targets are represented by pink circles noted with standard gene names.

Table 3.

Ranking of the 20 essential oil compounds in the compound target network.

No. a Compound Name Degree Value b
33 Nerol 29
34 Citronellol 29
36 Geraniol 28
44 Geranic acid 28
4 cis-3-Hexen-1-ol 27
6 1-Hexanol 27
15 trans-β-Ocimene 21
35 Neral 21
47 Phloroglucinol trimethyl ether 21
17 cis-Linalool oxide furan 20
18 trans-Linalool oxide furan 20
26 Hydroquinone dimethyl ether 20
20 Nonanal 19
21 Linalool 19
37 Geranial 19
41 Citronellyl acetate 18
2 Hexanal 17
32 4,7-Dimethylbenzofuran 15
22 cis-rose oxide 13
24 Benzeneethanol 9

a No., numbering of essential oil compounds, see Table 2; b Degree value of the compound in the compound target network as demonstrated in Figure 6.

Enrichment analyses included GO, KEGG and DisGeNET. GO molecular functions were mainly enriched in oxidoreductase and neurotransmitter receptor activities. GO cellular components were enriched in synaptic membrane and transmembrane transporter complex. GO biological processes were enriched in the regulation of hormone levels, synaptic signaling and cellular response to organic cyclic compounds (Figure 7). KEGG pathways were predominantly enriched in neuroactive ligand–receptor interaction, the log10P (−32.08) of which was much lower than others (Figure 8). Others included drug metabolism, nitrogen metabolism and steroid hormone biosynthesis. DisGeNET diseases were mainly enriched by chronic alcoholic intoxication, memory impairment and addictive behavior (Figure 9).

Figure 7.

Figure 7

Enrichment analysis on GO molecular functions, cellular components and biological processes that demonstrates the representative top 10 enriched terms.

Figure 8.

Figure 8

Enrichment analysis on KEGG pathways that demonstrates the representative top 20 enriched terms. Count, the number of input genes that fall into this term; −Log P, the minus of p-value in log base 10; InList/InTerm ratio, the ratio of the gene count in the list that hit the term to the gene count of the total genome of this term.

Figure 9.

Figure 9

Enrichment analysis on DisGeNET that demonstrates the representative top 20 enriched diseases. Count, the number of input genes that fall into this term; −Log P, the minus of p-value in log base 10; InList/InTerm ratio, the ratio of the gene count in the list that hit the term to the total gene count of this term.

The protein—protein interaction (PPI) network of the 190 targets identified 183 connected nodes (targets) and 992 edges (interactions) (Figure 10a; Table S3 in Supplementary Materials). The first filtering was applied to retain nodes with degree, closeness centrality and betweenness centrality, all above average (10.84, 0.3669 and 9.842 × 10−3, respectively), resulting in a subnetwork of 41 targets (Figure 10b). Topological parameters of this subnetwork were recalculated and the second filtering was applied to retain nodes with new degree, closeness centrality and betweenness centrality, all above average (10.83, 0.5435 and 2.208 × 10−2, respectively), which afforded 14 core targets (Figure 10c).

Figure 10.

Figure 10

Figure 10

PPI network of the potential targets of essential oil compounds of woody peony. (a) Total network consisting of all connected nodes (183 targets); (b) Subnetwork consisting of 41 targets after first filtering applied; (c) Core network consisting of 14 targets after second filtering applied. The size and color of each node is representative of its degree value within the present network. The line width and color of each edge is representative of the combined interaction score.

The final ranking of the 14 targets in this core network (Table 4) was SLC6A4 (sodium-dependent serotonin transporter), CNR1 (cannabinoid receptor 1), ACHE (acetylcholinesterase), HTR1A (5-hydroxytryptamine receptor 1A), DRD2 (dopamine D2 receptor), MAOA (monoamine oxidase type A), CHRNA4 (neuronal acetylcholine receptor subunit alpha-4), NR3C1 (glucocorticoid receptor), OPRM1 (mu-type opioid receptor) and HTR2A (5-hydroxytryptamine receptor 2A), MAOB (monoamine oxidase type B), CHRM2 (muscarinic acetylcholine receptor M2), PTGS2 (prostaglandin G/H synthase 2) and EGFR (epidermal growth factor receptor).

Table 4.

Ranking of all the 14 core targets in the PPI core network.

Target a Full Name of the Target Degree Value b
SLC6A4 Sodium-dependent serotonin transporter 11
CNR1 Cannabinoid receptor 1 10
ACHE Acetylcholinesterase 10
HTR1A 5-Hydroxytryptamine receptor 1A 10
DRD2 Dopamine D2 receptor 10
MAOA Monoamine oxidase type A 9
CHRNA4 Neuronal acetylcholine receptor subunit alpha-4 9
NR3C1 Glucocorticoid receptor 8
OPRM1 Mu-type opioid receptor 8
HTR2A 5-Hydroxytryptamine receptor 2A 7
MAOB Monoamine oxidase type B 7
CHRM2 Muscarinic acetylcholine receptor M2 6
PTGS2 Prostaglandin G/H synthase 2 4
EGFR Epidermal growth factor receptor 3

a The standard gene name representative of each target; b Degree value of each target in the present core network (14 targets) of PPI as demonstrated in Figure 10c.

3. Discussion

The eleven cultivars of the woody peony (P. × suffruticosa) investigated in this study were representative ones that are widely cultivated in the Central Plains of China, especially the Luoyang district. They belong to different color series of petals due to varied contents of anthocyanins [24]. In the present study, they were grown under similar ecological and climatic conditions. Moreover, the harvest and extraction conditions were almost constantly controlled. Therefore, the variances in the essential oil yields were mainly attributed to genotypes. On the other hand, the yields obtained herein were lower than that of the dried flower buds of P. × suffruticosa (0.79%, cultivar not specified) [6]. They were also lower than the reported yields achieved by supercritical CO2 extraction from the dried petals of eleven P. × suffruticosa cultivars (0.81–1.09%, including ‘Jingyu’ 0.93% and ‘Erqiao’ 0.95%, which were investigated in the present study as well) [7]. Meanwhile, they were comparable to or lower than those of the flower essential oils of eight other P. × suffruticosa cultivars investigated in our previous study (0.28–0.93%) [8]. In contrast, they were higher than the reported yields of the fresh petals of two woody peony cultivars (0.09% and 0.10%, possibly on fresh basis) [5] and dried petals of P. × suffruticosa (0.66 mg/g, cultivar not specified) [4]. The yield variances between the present study and literature data can be attributed to genotypes, ecological and climatic conditions [10,12], harvest or postharvest factors, and, more importantly, extraction methods [13,14]. Indeed, application of innovative techniques improves the extraction efficiency in terms of time and energy consumption, as well as production yield and quality of essential oils [4,14,23]. Further studies are needed for the evaluation and comparison of green and innovative techniques with the same woody peony flower materials.

As for the chemical composition of woody peony essential oils, there are remarkable differences between this study and the literature, and between different literature reports. Our previous studies have focused on hydrolate extracts of some other P. × suffruticosa cultivars which possess higher percentages of oxygenated compounds (87.4–99.8%). Specifically, they show a predominance of benzeneethanol (48.0–79.5%), phloroglucinol trimethyl ether (50.2–72.8%), citronellol (30.7–57.2%) or balanced chemical types [8,9]. Han and Bhat [6] reported on hydro-distilled essential oil of P. × suffruticosa dried flower buds, which were characterized by n-alkanes (28.6%), methyl isobutyl ketone (0.8%), benzaldehyde (0.6%), furfural (0.4%) and hexadecanoic acid methyl ester (0.3%). Zhang et al. [4] reported on microwave-assisted steam-distilled essential oil of P. × suffruticosa petals (cultivar not specified) from East China, which were characterized by tetracosane (24.9%), docosane (20.7%), hexacosane (16.6%), α-terpineol (3.3%), geraniol (2.6%), linalool (1.2%), 8-heptadecene (1.4%) and cis-linalool oxide (1.0%). They also found that the chemical composition altered with specific distillation methods. In a study on supercritical CO2-extracted petal essential oils of eleven P. × suffruticosa cultivars and three wild Paeonia species from Northwest China, the main components out of the 163 identified ones were linalool oxide, (Z)-5-dodecenyl acetate, nonadecane, (Z)-5-nonadecene, heneicosane, phytol and ethyl linoleate. ‘Jingyu’ and ‘Erqiao’ essential oils have also been reported in this literature study [7]. However, their identified chemical compositions in the present study were quite different. In the present study, ‘Jingyu’ essential oil possessed much higher citronellol content (23.1% vs. 0.1%). For ‘Erqiao’ essential oil, the predominant higher fatty acid esters in the literature report were not found in the present study. Recently, Wu et al. [5] reported that the essential oils of two woody peony cultivars from Northwest China were different in chemical composition. ‘ZiBan’ is represented by alcohols, alkanes and acids, whereas ‘FengDan’ is represented by aldehydes, alcohols and terpenes.

As for the multivariate analysis of woody peony flower essential oils, literature data are scarce. Our previous study focused on hydrolate extracts of woody peony flowers. The PCA results revealed that the cultivar ‘Linghua Zhanlu’ was most distinct among the ten cultivars, due to the occurrence of geraniol, 6,9-heptadecadiene, 2-heptanol, pentadecane and cis-3-nonen-1-ol [9]. In another study involving eight other cultivars, the clustering of hydrolate samples was somewhat not typical [8]. Zhang et al. [7] reported four clusters from supercritical extracted petal essential oils of eleven P. × suffruticosa cultivars and three wild Paeonia species, which were represented by ethyl linoleate, (Z)-5-dodecenyl acetate, octadecanal and linalool oxide, respectively. In the present study, three clusters representative of phloroglucinol trimethyl ether, citronellol and mixed chemotypes emerged from the HCA and PCA, which were different from literature data. Even for the two cultivars ‘Jingyu’ and ‘Erqiao’, which were also reported on in the literature [7], their chemotypes in the present study were different. It is reported that the chemical type variances of essential oils are due to genotypes [11,12], geographical and climatic conditions [10], harvest and postharvest factors and extraction methods [13,14].

The 20 compounds that survived drug-likeness screening should be stressed in terms of potential activities of woody peony essential oils, particularly the six key compounds (nerol, citronellol, geraniol, geranic acid, cis-3-hexen-1-ol and 1-hexanol) summarized from the compound target network. They were mostly oxygenated compounds, which are recognized to be more important than hydrocarbons [8,25]. Literature reports suggest central nervous system (CNS) activities for most of the 20 compounds. Nerol possesses an anxiolytic effect in mice [26]. Geraniol shows neuroprotective effects against zinc oxide nanoparticles in rats [27]. Citronellol possesses anti-nociceptive, anti-anxiety and anticonvulsant effects with low toxicity [28]. Geranic acid is the sequential oxidative product of geraniol and geranial, which is less odor-active but acts as enhancer for geraniol-related oxygenated terpenes [29]. The cis-3-hexen-1-ol and 1-hexanol possess fresh green leaf aroma [30]. A mixture of cis-3-hexen-1-ol and trans-2-hexenal attenuates behavioral and stress responses induced by olfactory and noxious stimuli in rats [31]. In addition, 1-hexanol, as well as other short chain alcohols, acts as a CNS depressant through the inhibition of NMDA (N-methyl-D-aspartate) gated currents [32]. Besides the six key compounds, others of the 20 compounds should not be disregarded. Linalool, as well as linalool abundant Lavandula angustifolia essential oil, counteracts social aversion induced by social defeat [33]. Linalool oxide furan has an anxiolytic effect upon inhalation [34]. Citronellyl acetate possesses an anti-nociceptive effect in mice, possibly involving TRPV1, TRPM8 and ASIC [35]. Rose oxide has an antidepressant activity, probably through the serotonergic pathway that involves the HTR1A receptor [36]. Citral, the mixture of geranial and neral, presents sedative and motor relaxant effects in mice [37]. In a recent report, citral exhibits anticonvulsant effect in zebrafish [38]. Phloroglucinol trimethyl ether, as well as similar oxygenated benzoids, constitutes typical flower volatiles of some varieties of Rosa odorata and R. chinensis. It presents a sedative effect and is used as perfume ingredients [39]. Benzeneethanol, a benzoid alcohol with pleasant aroma characteristic of rose flowers, has a sedative activity via inhalation [40]. The 4,7-dimethylbenzofuran also occurs in the volatiles of woody peony seed oil, which possesses aromas of grass, slight bitterness and fragrance [41].

Further enrichment analysis of the potential targets clearly indicated that the top enriched terms in GO, KEGG and DisGeNET were mostly related to the CNS, particularly neuroactive ligand–receptor interaction in KEGG pathways, and chronic alcoholic intoxication, memory impairment and addictive behavior in DisGeNET diseases. More importantly, PPI analysis indicated that 11 of the 14 core targets were CNS-related. Specifically, SLC6A4, HTR1A and MAOA are targets for antidepressants. CNR1 and OPRM1 are targets for analgesics. DRD2 and HTR2A are targets for antipsychotics. ACHE is the target for treatment of Alzheimer’s disease. CHRNA4, MAOB and CHRM2 are targets for the treatment of Parkinson’s disease [42,43]. Indeed, all the 20 compounds that survived drug-likeness screening showed predictive BBB permeation. Besides, when essential oil compounds pass through the BBB, they possibly affect the CNS [44]. Further, some essential oils and their main constituents are active on the CNS [33]. As for the other three core targets, NR3C1 and PTGS2 are targets for steroidal and non-steroidal anti-inflammatory agents, respectively. EGFR is the target for treatment of non-small-cell lung cancer with gene mutants [42,43].

The findings that came from this study are important and informative for developing the practical applications of the woody peony flower essential oils. The chemotype identification provides useful information on their specific uses in flavors, fragrances and cosmetics. For example, the ‘Zhaofen’ and ‘Jingyu’ essential oils may serve as alternatives to rose-type essential oils, due to high levels of citronellol as well as low levels of other rose-related aroma compounds. This study also gives instructions on the selection of specific chemo-cultivars of woody peony for cultivation and essential oil production. Moreover, the results of target network analysis suggest that the woody peony essential oils have a potential importance in aromatherapy, especially for alternative treatment of CNS disorders. Importantly, natural fragrant compounds possess relatively low neurotoxicity and are basically safe [44]. Besides, treatment for CNS disorders nowadays has more or less side effects [28]. Therefore, woody peony flower essential oils can be developed for aromatherapy applications. Nevertheless, further studies are needed on their in vivo effects and specific mechanisms.

4. Materials and Methods

4.1. Materials and Regents

Flower materials of P. × suffruticosa Andr. were collected in April 2019 from the Garden of National Flower of China. The location coordinate was 112.45° E and 34.65° N with an altitude of 140 m, Luoyang, Henan Province, China. Eleven representative cultivars were collected, namely ‘Fugui Mantang’, ‘Wujin Yaohui’, ‘Caihui’, ‘Baiyuan Zhenghui’, ‘Erqiao’, ‘Jingyu’, ‘Lan Baoshi’, ‘Hong Baoshi’, ‘Taohong Feicui’, ‘Zhaofen’ and ‘Manjiang Hong’ (Table 1). Authentication of plant materials was performed by Dr. Gaoming Lei, Department of Pharmaceutical Sciences, Henan University of Science and Technology. Voucher specimens numbering PS190412-01~PS190412-11 are deposited at Herbarium of Department of Pharmaceutical Sciences, Henan University of Science and Technology. Analytical standard of C7–C30 saturated alkanes with individual component of 1000 μg/mL in hexane (ID 49451-U, lot LRAC0353) was purchased from Sigma-Aldrich, Laramie, WY, USA. Purified water was produced by Wahaha Group Co., Ltd., Hangzhou, China. The n-hexane, sodium chloride, anhydrous sodium sulfate and other chemical reagents were of analytical grade.

4.2. Hydro-Distillation

Fresh flowers of woody peony were hydro-distilled in a Clevenger-type apparatus (Changsheng Apparatus for Science and Education, Hangzhou, China). The essential oil was trapped in n-hexane on top of a water layer inside the receiver of the apparatus. The hydro-distillation was performed in triplicate. The organic layer was collected and dried with anhydrous sodium sulfate. It was evaporated to afford the essential oil which was stored in 5 °C prior to chromatographic analysis. The yield was measured as the mass percent of the essential oil relative to the dried basis of fresh flowers. The water content of fresh flowers which was determined through distillation with toluene was used for calculation.

4.3. GC-MS and GC-FID Analysis

GC-MS was performed on 6890N GC with 5975 inert MSD (Agilent Technologies, Santa Clara, CA, USA) using HP-5ms column (length of 30 m, inner diameter of 0.25 mm, film thickness of 0.25 μm, Agilent Technologies, Santa Clara, CA, USA). The essential oil was diluted in hexane, 1.0 μL of which was injected to the chromatograph. The split mode was selected and split ratio was 20:1. The injector temperature was 250 °C. The carrier gas was helium and column flow was set at 1.0 mL/min. The initial temperature of the column was set at 50 °C. After injection, it was immediately raised to 200 °C at 3 °C/min, further to 240 °C at 10 °C/min, and kept thermostatically for 15 min. For the essential oil samples, there was a post run set at 250 °C for 2 min. For the C7–C30 saturated alkanes standard, after being kept at 240 °C for 15 min, the column temperature was further raised to 250 °C at 10 °C/min and then kept at 250 °C for 10 min. The MSD transfer line was set at 280 °C. Full scan mode was used at the range of 29–400 amu. The MS quadrupole was set at 150 °C and the ion source was 230 °C. The ion energy was 69.9 eV. GC-FID was performed on 6890N GC with FID (Agilent Technologies, Santa Clara, CA, USA) using HP-5ms column (30 m × 0.25 mm id, film thickness 0.25 μm, Agilent Technologies, Santa Clara, CA, USA). Analytical conditions were as follows: injection volume of 1.0 μL, carrier gas of helium, split mode, split ratio of 20:1, injector temperature of 250 °C, constant flow mode, column flow of 1.0 mL/min, FID temperature of 280 °C. The temperature program of the column was the same as that of GC-MS.

The essential oil components were identified taking into account mass spectra and retention indices. Experimental mass spectrum of each peak was searched against the reference mass spectra database NIST05a. The experimental retention index of each peak determined with C7–C30 saturated alkanes standard was compared with literature values [8,9,18,19]. The percentage of the individual components was calculated using the method of peak area integration based on FID response.

4.4. Multivariate Analysis

The total essential oil composition from the eleven woody peony cultivars was subjected to multivariate analysis of HCA and PCA. The data for analysis contained percentages of individual components of all the eleven cultivars. For HCA, Ward linkage and squared Euclidean distance was used. For PCA, the covariance matrix was used. The analysis was performed using R software [45].

4.5. Target Network Analysis

Essential oil components with percentages lower than 1.0% in all samples were not considered, and were excluded. Retained compounds were submitted to PubChem (https://pubchem.ncbi.nlm.nih.gov/, accessed on 30 March 2021) to retrieve their chemical information [46]. The compounds were submitted to SwissADME (http://www.swissadme.ch/, accessed on 2 April 2021) for drug-likeness screening under the criterion of zero violation to Lipinski’s rule [47]. Compounds that survived were subjected to target prediction in Homo sapiens. To make predictive results as accurate and inclusive as possible, three online tools were utilized in a complementary way. They were SwissTargetPrediction [48] (http://swisstargetprediction.ch/, accessed on 6 April 2021; Parameters: probability > 0, top 10), ChemMapper [49] (http://lilab-ecust.cn/chemmapper/index.html, last accessed on 1 May 2021; Parameters: 3D similarity by SHAFTS method [50], BindingDB database [51], similarity threshold 1.2, top 10) and BATMAN [52] (http://bionet.ncpsb.org.cn/batman-tcm/, accessed on 7 April 2021; Parameters: score cutoff 80, adjusted p-value cutoff 0.05, top 10). Afterwards, the predicted targets were combined and integrated with standard gene names using UniProt (https://www.uniprot.org/, accessed on 28 May 2021) [53]. The compound target network was visualized and analyzed by Cytoscape software [54].

Enrichment analysis on GO [55,56], KEGG [57] and DisGeNET [58] was performed on Metascape (https://metascape.org/gp/index.html#/main/step1, accessed on 18 June 2021) [59]. Parameters were: input as H. sapiens, minimum overlap 3, p-value cutoff 0.01 and minimum enrichment factor 1.5. The list of potential targets was also submitted to STRING (https://cn.string-db.org/, accessed on 4 June 2021) [60] to evaluate the PPI network. Parameters were: type of full network, active interaction sources as text mining, experiments, databases, co-expression, neighborhood, gene fusion and co-occurrence, minimum required interaction score as medium confidence at 0.40. The PPI network of connected nodes (the disconnected nodes were not considered in this step) was visualized and analyzed by Cytoscape software [54]. To identify the core targets, the entire network was refined in two consecutive steps, each of which involved retaining nodes with degree, closeness centrality and betweenness centrality all above average.

4.6. Other Statistics

Other statistics were calculated with R software [45]. ANOVA was performed to evaluate the statistical significance of data variation. Post-hoc test with Tukey’s method was used for multiple comparisons. The significance level was set as 0.05 unless otherwise noted.

5. Conclusions

Eleven representative woody peony cultivars (Paeonia × suffruticosa Andr.) were investigated for the chemical diversity of flower essential oils and potential target network of the components. The chemical compositions of the essential oils exhibited variances, suggesting that they were affected by the genotypes. HCA and PCA analyses gave three distinct clusters representative of phloroglucinol trimethyl ether (‘Caihui’), citronellol (‘Jingyu’, ‘Zhaofen’ and ‘Baiyuan Zhenghui’) and mixed (the rest of the cultivars) chemotypes. Interestingly, ‘Zhaofen’ and ‘Jingyu’ exhibited not only high levels of citronellol but also low levels of other rose-related aroma compounds, which allowed them to serve as alternatives to rose-type essential oils. Drug-likeness screening gave 20 essential oil compounds. Interestingly, they all exhibited predictive BBB permeation. The compound target network demonstrated six key compounds, namely, nerol, citronellol, geraniol, geranic acid, cis-3-hexen-1-ol and 1-hexanol, which should be especially stressed in terms of the potential activities of the woody peony essential oils. Enrichment analysis on GO, KEGG and DisGeNET indicated that the top enriched terms were mostly related to CNS. PPI analysis resulted in 14 core targets, 11 of which were CNS-related, including those for antidepressants, analgesics, antipsychotics, and anti-Alzheimer’s and anti-Parkinson’s agents. The findings that came from this work provide useful information for the selection of the specific chemo-cultivars of woody peony for cultivation and essential oil production. They also demonstrate the potential importance of woody peony flower essential oils in aromatherapy, especially for the alternative treatment of CNS disorders. Further studies are needed on their in vivo effects and specific mechanisms.

Acknowledgments

We thank Tao Zheng, the chief horticulturist of the Garden of National Flower of China, for his assistance in collecting the flower materials.

Supplementary Materials

The following supporting information can be downloaded at: https://www.mdpi.com/article/10.3390/molecules27092829/s1, Table S1: Results of drug-likeness screening for the 45 essential oil compounds; Table S2: The list of the 190 predictive potential targets for the 20 essential oil compounds; Table S3: Main topological parameters for the total network of protein—protein interactions.

Author Contributions

Conceptualization, G.L.; methodology, G.L.; software, C.S., X.W., G.G. and Y.Q.; validation, C.S., X.W. and G.G.; formal analysis, C.S.; investigation, C.S., X.W., G.G. and Y.Q.; resources, G.L.; data curation, G.L.; writing—original draft preparation, G.L.; writing—review and editing, G.L.; visualization, C.S., X.W., G.G. and Y.Q.; supervision, G.L.; project administration, G.L.; funding acquisition, G.L. All authors have read and agreed to the published version of the manuscript.

Institutional Review Board Statement

Not applicable.

Informed Consent Statement

Not applicable.

Data Availability Statement

The data are contained within this article.

Conflicts of Interest

The authors declare no conflict of interest.

Sample Availability

Samples of the compounds are not available from the authors.

Funding Statement

This work was funded by the Scientific and Technological Project of Henan Province at grant number 222102310376, and Doctoral Startup Foundation of Henan University of Science and Technology at grant number 4020-13480039.

Footnotes

Publisher’s Note: MDPI stays neutral with regard to jurisdictional claims in published maps and institutional affiliations.

References

  • 1.Hong D., Pan K., Turland N.J., Paeonia L. In: Flora of China. Wu Z., Raven P.H., editors. Volume 6. Science Press; Beijing, China: Missouri Botanical Garden Press; St. Louis, MO, USA: 2001. pp. 127–132. [Google Scholar]
  • 2.Li J., Zhang X., Zhao X. Tree Peony of China. Volume 1. Encyclopedia of China Publishing House; Beijing, China: 2011. pp. 2–67. [Google Scholar]
  • 3.Nanjing University of Chinese Medicine . In: Great Dictionary of Traditional Chinese Medicine. 2nd ed. Zhao G., Dai S., Chen R., editors. Volume 1. Shanghai Scientific & Technical Publishers; Shanghai, China: 2006. pp. 1576–1579. [Google Scholar]
  • 4.Zhang Q., Huo R., Ma Y., Yan S., Yang L., Chen F. A novel microwave-assisted steam distillation approach for separation of essential oil from tree peony (Paeonia suffruticosa Andrews) petals: Optimization, kinetic, chemical composition and antioxidant activity. Ind. Crops Prod. 2020;154:112669. doi: 10.1016/j.indcrop.2020.112669. [DOI] [Google Scholar]
  • 5.Wu Y., Li L., Yuan W., Hu J., Lv Z. Application of GC × GC coupled with TOF–MS for the trace analysis of chemical components and exploration the characteristic aroma profile of essential oils obtained from two tree peony species (Paeonia rockii and Paeonia ostii) Eur. Food Res. Technol. 2021;247:2591–2608. doi: 10.1007/s00217-021-03823-w. [DOI] [Google Scholar]
  • 6.Han C.V., Bhat R. In vitro control of food-borne pathogenic bacteria by essential oils and solvent extracts of underutilized flower buds of Paeonia suffruticosa (Andr.) Ind. Crops Prod. 2014;54:203–208. doi: 10.1016/j.indcrop.2014.01.014. [DOI] [Google Scholar]
  • 7.Zhang X.X., Sun J.Y., Niu L.X., Zhang Y.L. Chemical compositions and antioxidant activities of essential oils extracted from the petals of three wild tree peony species and eleven cultivars. Chem. Biodivers. 2017;14:e1700282. doi: 10.1002/cbdv.201700282. [DOI] [PubMed] [Google Scholar]
  • 8.Lei G., Li J., Zheng T., Yao J., Chen J., Duan L. Comparative chemical profiles of essential oils and hydrolate extracts from fresh flowers of eight Paeonia suffruticosa Andr. cultivars from Central China. Molecules. 2018;23:3268. doi: 10.3390/molecules23123268. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 9.Lei G., Song C., Luo Y. Chemical composition of hydrosol volatiles of flowers from ten Paeonia × suffruticosa Andr. cultivars from Luoyang, China. Nat. Prod. Res. 2021;35:3509–3513. doi: 10.1080/14786419.2019.1709192. [DOI] [PubMed] [Google Scholar]
  • 10.Nezhadasad Aghbash B., Dehghan G., Movafeghi A., Talebpour A.H., Pouresmaeil M., Maggi F., Sabzi Nojadeh M. Chemical compositions and biological activity of essential oils from four populations of Satureja macrantha C.A. Mey. J. Essent. Oil Res. 2021;33:133–142. doi: 10.1080/10412905.2020.1871085. [DOI] [Google Scholar]
  • 11.Najar B., Pieracci Y., Cervelli C., Flamini G., Pistelli L. Volatolomics of three south African Helichrysum species grown in pot under protected environment. Molecules. 2021;26:7283. doi: 10.3390/molecules26237283. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 12.Silvestre W.P., Sachett F.H., Agostini F., Boettcher G.N., Sulzbach M., Gonzatto M.P., Schwarz S.F., Pauletti G.F. Chemical composition of petitgrain (leaf) essential oil of different Citrus rootstocks and scion cultivars. J. Essent. Oil Res. 2020;32:394–406. doi: 10.1080/10412905.2020.1787886. [DOI] [Google Scholar]
  • 13.Sulzbach M., da Silva M.A.S., Gonzatto M.P., Marques M.M.O., Böettcher G.N., Silvestre W.P., Silva J.C.R.L., Pauletti G.F., Schwarz S.F. Effect of distillation methods on the leaf essential oil of some Citrus cultivars. J. Essent. Oil Res. 2021;33:452–463. doi: 10.1080/10412905.2021.1936666. [DOI] [Google Scholar]
  • 14.Kessler J.C., Vieira V.A., Martins I.M., Manrique Y.A., Afonso A., Ferreira P., Mandim F., Ferreira I.C.F.R., Barros L., Rodrigues A.E., et al. Obtaining aromatic extracts from portuguese Thymus mastichina L. by hydrodistillation and supercritical fluid extraction with CO2 as potential flavouring additives for food applications. Molecules. 2022;27:694. doi: 10.3390/molecules27030694. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 15.Yang X., Li Y., Lv R., Qian H., Chen X., Yang C.F. Study on the multitarget mechanism and key active ingredients of Herba Siegesbeckiae and volatile oil against rheumatoid arthritis based on network pharmacology. Evid. Based Complement. Altern. Med. 2019;2019:8957245. doi: 10.1155/2019/8957245. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 16.Wang L., Tan N., Hu J., Wang H., Duan D., Ma L., Xiao J., Wang X. Analysis of the main active ingredients and bioactivities of essential oil from Osmanthus fragrans Var. thunbergii using a complex network approach. BMC Syst. Biol. 2017;11:144. doi: 10.1186/s12918-017-0523-0. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 17.Khan R.A., Hossain R., Siyadatpanah A., Al-Khafaji K., Khalipha A.B.R., Dey D., Asha U.H., Biswas P., Saikat A.S.M., Chenari H.A., et al. Diterpenes/diterpenoids and their derivatives as potential bioactive leads against dengue virus: A computational and network pharmacology study. Molecules. 2021;26:6821. doi: 10.3390/molecules26226821. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 18.National Institute of Standards and Technology NIST Chemistry WebBook, NIST Standard Reference Database Number 69. [(accessed on 20 March 2021)];2021 Available online: https://webbook.nist.gov/chemistry/
  • 19.Royal Society of Chemistry ChemSpider Online Database. 2021. [(accessed on 21 March 2021)]. Available online: https://www.chemspider.com/
  • 20.Joshi R.K. Volatile constituents of leaf, stem and flower of the traditional shrub Pogostemon plectranthoides Desf. from the Western Ghats, India. Nat. Prod. Res. 2022;36:411–413. doi: 10.1080/14786419.2020.1768092. [DOI] [PubMed] [Google Scholar]
  • 21.Setzer W.N. Germacrene D cyclization: An ab initio investigation. Int. J. Mol. Sci. 2008;9:89–97. doi: 10.3390/ijms9010089. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 22.Wu Y., Han X., Yuan W., Wang X., Meng D., Hu J., Lv Z. Salt intervention for the diversities of essential oil composition, aroma and antioxidant activities of Kushui rose (R. setate × R. rugosa) Ind. Crops Prod. 2020;150:112417. doi: 10.1016/j.indcrop.2020.112417. [DOI] [Google Scholar]
  • 23.Filly A., Fabiano-Tixier A.S., Louis C., Fernandez X., Chemat F. Water as a green solvent combined with different techniques for extraction of essential oil from lavender flowers. C. R. Chim. 2016;19:707–717. doi: 10.1016/j.crci.2016.01.018. [DOI] [Google Scholar]
  • 24.Zhang C., Wang W., Wang Y., Gao S., Du D., Fu J., Dong L. Anthocyanin biosynthesis and accumulation in developing flowers of tree peony (Paeonia suffruticosa) ‘Luoyang Hong’. Postharvest Biol. Technol. 2014;97:11–22. doi: 10.1016/j.postharvbio.2014.05.019. [DOI] [Google Scholar]
  • 25.Rajeswara Rao B.R., Adinarayana G., Kumar A.N., Rajput D.K., Syamasundar K.V. Chemical-profile variations in essential oils isolated from lemongrass (Cymbopogon flexuosus) biomass and condensate wastewater by re-distillation and solvent extraction techniques. J. Essent. Oil Res. 2016;28:557–564. doi: 10.1080/10412905.2016.1167130. [DOI] [Google Scholar]
  • 26.Marques T.H.C., Marques M.L.B.G.C.B., dos Santos Lima D., Siqueira H.D.S., Neto J.D.N., Branco M.S.B.G.C., de Souza A.A., de Sousa D.P., de Freitas R.M. Evaluation of the neuropharmacological properties of nerol in mice. World J. Neurosci. 2013;3:32–38. doi: 10.4236/wjns.2013.31004. [DOI] [Google Scholar]
  • 27.Farokhcheh M., Hejazian L., Akbarnejad Z., Pourabdolhossein F., Hosseini S.M., Mehraei T.M., Soltanpour N. Geraniol improved memory impairment and neurotoxicity induced by zinc oxide nanoparticles in male wistar rats through its antioxidant effect. Life Sci. 2021;282:119823. doi: 10.1016/j.lfs.2021.119823. [DOI] [PubMed] [Google Scholar]
  • 28.Santos P.L., Matos J.P.S.C.F., Picot L., Almeida J.R.G.S., Quintans J.S.S., Quintans-Júnior L.J. Citronellol, a monoterpene alcohol with promising pharmacological activities—A systematic review. Food Chem. Toxicol. 2019;123:459–469. doi: 10.1016/j.fct.2018.11.030. [DOI] [PubMed] [Google Scholar]
  • 29.Sanekata A., Tanigawa A., Takoi K., Nakayama Y., Tsuchiya Y. Identification and characterization of geranic acid as a unique flavor compound of hops (Humulus lupulus L.) variety Sorachi Ace. J. Agric. Food Chem. 2018;66:12285–12295. doi: 10.1021/acs.jafc.8b04395. [DOI] [PubMed] [Google Scholar]
  • 30.Chen J., Lü J., He Z., Zhang F., Zhang S., Zhang H. Investigations into the production of volatile compounds in Korla fragrant pears (Pyrus sinkiangensis Yu) Food Chem. 2020;302:125337. doi: 10.1016/j.foodchem.2019.125337. [DOI] [PubMed] [Google Scholar]
  • 31.Nikaido Y., Miyata S., Nakashima T. Mixture of cis-3-hexenol and trans-2-hexenal attenuates behavioral and stress responses induced by 2,5-dihydro-2,4,5-trimethylthiazoline and electric footshock stress in rats. Physiol. Behav. 2011;103:547–556. doi: 10.1016/j.physbeh.2011.04.011. [DOI] [PubMed] [Google Scholar]
  • 32.Criswell H.E., Ming Z., Pleasant N., Griffith B.L., Mueller R.A., Breese G.R. Macrokinetic analysis of blockade of NMDA-gated currents by substituted alcohols, alkanes and ethers. Brain Res. 2004;1015:107–113. doi: 10.1016/j.brainres.2004.04.050. [DOI] [PubMed] [Google Scholar]
  • 33.Caputo L., Reguilon M.D., Mińarro J., De Feo V., Rodriguez-Arias M. Lavandula angustifolia essential oil and linalool counteract social aversion induced by social defeat. Molecules. 2018;23:2694. doi: 10.3390/molecules23102694. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 34.Souto-Maior F.N., de Carvalho F.L., de Morais L.C.S.L., Netto S.M., de Sousa D.P., de Almeida R.N. Anxiolytic-like effects of inhaled linalool oxide in experimental mouse anxiety models. Pharmacol. Biochem. Behav. 2011;100:259–263. doi: 10.1016/j.pbb.2011.08.029. [DOI] [PubMed] [Google Scholar]
  • 35.Rios E.R.V., Rocha N.F.M., Carvalho A.M.R., Vasconcelos L.F., Dias M.L., de Sousa D.P., de Sousa F.C.F., de França Fonteles M.M. TRP and ASIC channels mediate the antinociceptive effect of citronellyl acetate. Chem. Biol. Interact. 2013;203:573–579. doi: 10.1016/j.cbi.2013.03.014. [DOI] [PubMed] [Google Scholar]
  • 36.Maia W.M.N., Andrade F.D.C.P.D., Filgueiras L.A., Mendes A.N., Assunção A.F.C., Rodrigues N.D.S., Marques R.B., Filho A.L.M.M., de Sousa D.P., Lopes L.D.S. Antidepressant activity of rose oxide essential oil: Possible involvement of serotonergic transmission. Heliyon. 2021;7:e06620. doi: 10.1016/j.heliyon.2021.e06620. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 37.do Vale T.G., Furtado E.C., Santos J.G., Viana G.S.B. Central effects of citral, myrcene and limonene, constituents of essential oil chemotypes from Lippia alba (Mill.) N.E. Brown. Phytomedicine. 2002;9:709–714. doi: 10.1078/094471102321621304. [DOI] [PubMed] [Google Scholar]
  • 38.Hacke A.C.M., Miyoshi E., Marques J.A., Pereira R.P. Cymbopogon citratus (DC.) Stapf, citral and geraniol exhibit anticonvulsant and neuroprotective effects in pentylenetetrazole-induced seizures in zebrafish. J. Ethnopharmacol. 2021;275:114142. doi: 10.1016/j.jep.2021.114142. [DOI] [PubMed] [Google Scholar]
  • 39.Zhou L., Yu C., Cheng B., Wan H., Luo L., Pan H., Zhang Q. Volatile compound analysis and aroma evaluation of tea-scented roses in China. Ind. Crops Prod. 2020;155:112735. doi: 10.1016/j.indcrop.2020.112735. [DOI] [Google Scholar]
  • 40.Oshima T., Ito M. Sedative effects of l-menthol, d-camphor, phenylethyl alcohol, and geraniol. J. Nat. Med. 2021;75:319–325. doi: 10.1007/s11418-020-01470-1. [DOI] [PubMed] [Google Scholar]
  • 41.Zhang Y., Luo J., Zeng F. Volatile composition analysis of tree peony (Paeonia section Moutan DC.) seed oil and the effect of oxidation during storage. J. Food Sci. 2021;86:3467–3479. doi: 10.1111/1750-3841.15790. [DOI] [PubMed] [Google Scholar]
  • 42.Wishart D.S., Knox C., Guo A.C., Cheng D., Shrivastava S., Tzur D., Gautam B., Hassanali M. DrugBank: A knowledgebase for drugs, drug actions and drug targets. Nucleic Acids Res. 2007;36:D901–D906. doi: 10.1093/nar/gkm958. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 43.Wishart D.S., Feunang Y.D., Guo A.C., Lo E.J., Marcu A., Grant J.R., Sajed T., Johnson D., Li C., Sayeeda Z., et al. DrugBank 5.0: A major update to the DrugBank database for 2018. Nucleic Acids Res. 2017;46:D1074–D1082. doi: 10.1093/nar/gkx1037. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 44.Yamada Y., Ohtani K., Imajo A., Izu H., Nakamura H., Shiraishi K. Comparison of the neurotoxicities between volatile organic compounds and fragrant organic compounds on human neuroblastoma SK-N-SH cells and primary cultured rat neurons. Toxicol. Rep. 2015;2:729–736. doi: 10.1016/j.toxrep.2015.05.002. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 45.R Core Team . R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing; Vienna, Austria: 2020. [Google Scholar]
  • 46.Kim S., Chen J., Cheng T., Gindulyte A., He J., He S., Li Q., Shoemaker B.A., Thiessen P.A., Yu B., et al. PubChem in 2021: New data content and improved web interfaces. Nucleic Acids Res. 2020;49:D1388–D1395. doi: 10.1093/nar/gkaa971. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 47.Daina A., Michielin O., Zoete V. SwissADME: A free web tool to evaluate pharmacokinetics, drug-likeness and medicinal chemistry friendliness of small molecules. Sci. Rep. 2017;7:42717. doi: 10.1038/srep42717. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 48.Daina A., Michielin O., Zoete V. SwissTargetPrediction: Updated data and new features for efficient prediction of protein targets of small molecules. Nucleic Acids Res. 2019;47:W357–W364. doi: 10.1093/nar/gkz382. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 49.Gong J., Cai C., Liu X., Ku X., Jiang H., Gao D., Li H. ChemMapper: A versatile web server for exploring pharmacology and chemical structure association based on molecular 3D similarity method. Bioinformatics. 2013;29:1827–1829. doi: 10.1093/bioinformatics/btt270. [DOI] [PubMed] [Google Scholar]
  • 50.Liu X., Jiang H., Li H. SHAFTS: A Hybrid Approach for 3D Molecular Similarity Calculation. 1. Method and Assessment of Virtual Screening. J. Chem. Inf. Model. 2011;51:2372–2385. doi: 10.1021/ci200060s. [DOI] [PubMed] [Google Scholar]
  • 51.Gilson M.K., Liu T., Baitaluk M., Nicola G., Hwang L., Chong J. BindingDB in 2015: A public database for medicinal chemistry, computational chemistry and systems pharmacology. Nucleic Acids Res. 2015;44:D1045–D1053. doi: 10.1093/nar/gkv1072. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 52.Liu Z., Guo F., Wang Y., Li C., Zhang X., Li H., Diao L., Gu J., Wang W., Li D., et al. BATMAN-TCM: A Bioinformatics Analysis Tool for Molecular mechANism of Traditional Chinese Medicine. Sci. Rep. 2016;6:21146. doi: 10.1038/srep21146. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 53.Consortium T.U. UniProt: The universal protein knowledgebase in 2021. Nucleic Acids Res. 2020;49:D480–D489. doi: 10.1093/nar/gkaa1100. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 54.Shannon P., Markiel A., Ozier O., Baliga N.S., Wang J.T., Ramage D., Amin N., Schwikowski B., Ideker T. Cytoscape: A software environment for integrated models of biomolecular interaction networks. Genome Res. 2003;13:2498–2504. doi: 10.1101/gr.1239303. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 55.Ashburner M., Ball C.A., Blake J.A., Botstein D., Butler H., Cherry J.M., Davis A.P., Dolinski K., Dwight S.S., Eppig J.T., et al. Gene Ontology: Tool for the unification of biology. Nat. Genet. 2000;25:25–29. doi: 10.1038/75556. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 56.Consortium T.G.O. The Gene Ontology resource: Enriching a GOld mine. Nucleic Acids Res. 2020;49:D325–D334. doi: 10.1093/nar/gkaa1113. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 57.Kanehisa M., Furumichi M., Tanabe M., Sato Y., Morishima K. KEGG: New perspectives on genomes, pathways, diseases and drugs. Nucleic Acids Res. 2016;45:D353–D361. doi: 10.1093/nar/gkw1092. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 58.Piñero J., Ramírez-Anguita J.M., Saüch-Pitarch J., Ronzano F., Centeno E., Sanz F., Furlong L.I. The DisGeNET knowledge platform for disease genomics: 2019 update. Nucleic Acids Res. 2019;48:D845–D855. doi: 10.1093/nar/gkz1021. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 59.Zhou Y., Zhou B., Pache L., Chang M., Khodabakhshi A.H., Tanaseichuk O., Benner C., Chanda S.K. Metascape provides a biologist-oriented resource for the analysis of systems-level datasets. Nat. Commun. 2019;10:1523. doi: 10.1038/s41467-019-09234-6. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 60.Szklarczyk D., Gable A.L., Nastou K.C., Lyon D., Kirsch R., Pyysalo S., Doncheva N.T., Legeay M., Fang T., Bork P., et al. The STRING database in 2021: Customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets. Nucleic Acids Res. 2020;49:D605–D612. doi: 10.1093/nar/gkaa1074. [DOI] [PMC free article] [PubMed] [Google Scholar]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Data Availability Statement

The data are contained within this article.


Articles from Molecules are provided here courtesy of Multidisciplinary Digital Publishing Institute (MDPI)

RESOURCES