Abstract
Antimicrobial susceptibility of clinical isolates collected from sites in central Europe in 2019 was tested by CLSI broth microdilution method and EUCAST breakpoints. Most active were amikacin, ceftazidime-avibactam and colistin; respectively, susceptibility rates among P. aeruginosa (n = 701) were 89.2%, 92.2% and 99.9%; difficult-to-treat (DTR) isolates, 62.5%, 37.5% and 100%; multidrug-resistant (MDR) isolates, 68.3%, 72.9% and 99.5%; meropenem-resistant (MEM-R), metallo-β-lactamase-negative (MBL-negative) isolates, 72.8%, 78.6% and 100%. Among Enterobacterales (n = 1639), susceptibility to ceftazidime-avibactam, colistin and tigecycline was ≥ 97.9%; MDR Enterobacterales, 96.8%, 94.4% and 100%, respectively; DTR isolates, ≥ 76.2% to ceftazidime-avibactam and colistin; MEM-R, MBL-negative isolates, ≥ 90.0% to ceftazidime-avibactam and colistin.
Keywords: Ceftazidime-avibactam, Pseudomonas aeruginosa, Enterobacterales, Antimicrobial surveillance, ATLAS, Difficult-to-treat
Introduction
Pseudomonas aeruginosa and members of the Enterobacterales are important pathogens that cause a range of infections. Their treatment can be problematic due to acquired and/or intrinsic antimicrobial resistance [1, 2]. Ceftazidime (a third-generation cephalosporin) in combination with avibactam (a diazabicyclooctane, non-β-lactam, β-lactamase inhibitor) has activity against Gram-negative organisms with Ambler class A, class C and some class D (e.g. OXA-48 type) β-lactamases, although the combination is not active against class B metallo-β-lactamases (MBLs) [3–5].
ATLAS (Antimicrobial Testing Leadership And Surveillance) is a freely accessible antimicrobial surveillance program with a searchable online database (www.atlas-surveillance.com) designed to chart the in vitro activity of antimicrobial agents against Gram-positive and Gram-negative organisms collected globally. In this analysis, we evaluate the in vitro activity of ceftazidime-avibactam and comparator agents against Pseudomonas aeruginosa and Enterobacterales isolates collected in 2019 from patients in Croatia, Czech Republic, Hungary, Poland, Latvia and Lithuania.
Materials and methods
Isolates of P. aeruginosa and Enterobacterales (N = 2340) were submitted by study centres in Croatia (n = 4), Czech Republic (n = 4), Hungary (n = 3), Poland (n = 4), Latvia (n = 1) and Lithuania (n = 2) in 2019 from patients of all ages. Acceptable sources were intra-abdominal, urinary tract, skin and skin structure, lower respiratory tract and bloodstream; only non-duplicate isolates of causative pathogens were accepted. Demographic information (specimen source, patient age and sex, and type of hospital setting) was recorded for each isolate.
Bacterial identification was confirmed at the central laboratory, International Health Management Associates, Inc. (IHMA; Schaumburg, IL, USA), using matrix-assisted laser desorption ionization-time of flight spectrometry (MALDI-TOF; Bruker Daltonics, Billerica, MA, USA). Susceptibility testing was according to the Clinical Laboratory Standards Institute (CLSI) broth microdilution methodology [6]. Ceftazidime-avibactam was tested with fixed concentration of avibactam at 4 mg/L. All minimum inhibitory concentration (MIC) values were interpreted using EUCAST breakpoints [7].
Difficult-to-treat (DTR) isolates were resistant to aztreonam, cefepime, ceftazidime, imipenem, meropenem, ciprofloxacin, levofloxacin and piperacillin-tazobactam. Multidrug-resistant (MDR) isolates were resistant to ≥ 1 agent from ≥ 3 classes: cephalosporins (ceftazidime, cefepime), monobactams (aztreonam), β-lactam/β-lactamase-inhibitor combinations (piperacillin-tazobactam), carbapenems (meropenem, imipenem), fluoroquinolones (levofloxacin, ciprofloxacin), aminoglycosides (amikacin) and polymyxins (colistin). Meropenem-resistant (MEM-R) isolates were isolates with an MIC to meropenem of ≥ 16 mg/L. Carbapenemase and metallo-β-lactamase (MBL) genes were determined using polymerase chain reaction (PCR) assays [8, 9]. Detected genes were amplified using flanking primers and sequenced, and sequences were compared against publicly available databases. Carbapenemase-positive isolates were identified as those with genes encoding a KPC, OXA-48-like, IMP, VIM, NDM, GES, GIM and/or SPM enzyme, and MBL-positive isolates were identified as those with genes encoding an NDM, IMP, VIM, GIM and/or SPM enzyme. MBL-negative isolates were defined as those that underwent testing but did not possess NDM, IMP, VIM, GIM and SPM genes.
Results
The majority of P. aeruginosa (n = 701) and Enterobacterales isolates (n = 1639) were collected from male patients, patients ≥ 18 years of age and non-ICU wards (Table 1). The highest proportion of P. aeruginosa isolates were from respiratory sources. Similar percentages of Enterobacterales isolates were from blood, respiratory or skin/musculoskeletal sources (Table 1).
Table 1.
Pseudomonas aeruginosa | Enterobacterales | |||
---|---|---|---|---|
N = 701 | N = 1639 | |||
n | % | n | % | |
Age groups (years) | ||||
0 to 17 | 85 | 12.1 | 151 | 9.2 |
18 to 64 | 261 | 37.2 | 525 | 32.0 |
≥ 65 | 353 | 50.4 | 958 | 58.5 |
Unknown | 2 | 0.3 | 5 | 0.3 |
Sex | ||||
Female | 246 | 35.1 | 678 | 41.4 |
Male | 453 | 64.6 | 955 | 58.3 |
Unknown | 2 | 0.3 | 6 | 0.4 |
Patient location | ||||
ICU | 271 | 38.7 | 511 | 31.2 |
General wards, Emergency | 395 | 56.3 | 1043 | 63.6 |
Unknown/Other | 35 | 5.0 | 85 | 5.2 |
Isolates sources | ||||
Circulatory (blood) | 114 | 16.3 | 403 | 24.6 |
Genitourinary | 82 | 11.7 | 253 | 15.4 |
Intestinal | 34 | 4.9 | 213 | 13.0 |
Respiratory | 296 | 42.2 | 415 | 25.3 |
Skin/musculoskeletal | 174 | 24.8 | 355 | 21.7 |
Unknown | 1 | 0.1 | 0 | 0.0 |
Pseudomonas aeruginosa
The agents against which P. aeruginosa had the highest rates of susceptibility (using standard dosing susceptibility breakpoints) were amikacin (89.2%), ceftazidime-avibactam (92.2%) and colistin (99.9%) (Table 2). For ceftazidime alone, 74.3% of isolates were susceptible (increased exposure). A total of 5.7% (40/701) of isolates were classified as DTR and 28.4% (199/701) were MDR. Among these isolates, susceptibility to colistin was unchanged (100% and 99.5%, respectively) relative to the whole P. aeruginosa set. Susceptibility rates to amikacin and ceftazidime-avibactam were 62.5% and 37.5%, respectively, against DTR isolates and 68.3% and 72.9%, respectively, against MDR isolates (Table 2). Results against MEM-R isolates were similar to those seen against MDR isolates for the majority of agents (Table 2). Against all three resistant subsets, rates of susceptibility (increased exposure) to ceftazidime (DTR, 0.0%; MDR, 16.1%; MEM-R, 24.0%) were lower than susceptibility rates (standard dosing) reported for ceftazidime-avibactam.
Table 2.
Antimicrobial | MIC90 (mg/L) | Range (mg/L) | Susceptible, standard dosing | Susceptible, increased exposure | Resistant | |||
---|---|---|---|---|---|---|---|---|
P. aeruginosa (n = 701) | n | % | n | % | n | % | ||
Amikacin | 32 | 0.5 – ≥ 128 | 625 | 89.2 | – | – | 76 | 10.8 |
Aztreonam | 32 | 0.25 – ≥ 256 | – | – | 586 | 83.6 | 115 | 16.4 |
Cefepime | 32 | 0.5 – ≥ 64 | – | – | 539 | 76.9 | 162 | 23.1 |
Ceftazidime | 64 | 0.25 – ≥ 256 | – | – | 521 | 74.3 | 180 | 25.7 |
Ceftazidime-avibactam | 8 | 0.12 – ≥ 256 | 646 | 92.2 | – | – | 55 | 7.8 |
Ciprofloxacin | ≥ 8 | ≤ 0.12 – ≥ 8 | – | – | 477 | 68.0 | 224 | 32.0 |
Colistin | 2 | 0.25 – ≥ 16 | 700 | 99.9 | – | – | 1 | 0.1 |
Gentamicin | ≥ 32 | ≤ 0.12 – ≥ 32 | – | – | – | – | – | – |
Imipenem | ≥ 16 | ≤ 0.06 – ≥ 16 | – | – | 473 | 67.5 | 228 | 32.5 |
Levofloxacin | ≥ 16 | ≤ 0.25 – ≥ 16 | – | – | 437 | 62.3 | 264 | 37.7 |
Meropenem | 16 | ≤ 0.06 – ≥ 32 | 471 | 67.2 | 105 | 15.0 | 125 | 17.8 |
Piperacillin-tazobactam | ≥ 128 | ≤ 0.12 – ≥ 128 | – | – | 501 | 71.5 | 200 | 28.5 |
Tigecycline | ≥ 16 | 1 – ≥ 16 | – | – | – | – | – | – |
DTR P. aeruginosa (n = 40) | ||||||||
Amikacin | 64 | 2 – ≥ 128 | 25 | 62.5 | – | – | 15 | 37.5 |
Aztreonam | 64 | 32 – ≥ 256 | – | – | 0 | 0.0 | 40 | 100 |
Cefepime | ≥ 64 | 16 – ≥ 64 | – | – | 0 | 0.0 | 40 | 100 |
Ceftazidime | ≥ 256 | 16 – ≥ 256 | – | – | 0 | 0.0 | 40 | 100 |
Ceftazidime-avibactam | ≥ 256 | 4 – ≥ 256 | 15 | 37.5 | – | – | 25 | 62.5 |
Ciprofloxacin | ≥ 8 | 1 – ≥ 8 | – | – | 0 | 0.0 | 40 | 100 |
Colistin | 2 | 0.5 – 2 | 40 | 100 | – | – | 0 | 0.0 |
Gentamicin | ≥ 32 | 0.25 – ≥ 32 | – | – | – | – | – | – |
Imipenem | ≥ 16 | 8 – ≥ 16 | – | – | 0 | 0.0 | 40 | 100 |
Levofloxacin | ≥ 16 | 4 – ≥ 16 | – | – | 0 | 0.0 | 40 | 100 |
Meropenem | ≥ 32 | 16 – ≥ 32 | 0 | 0.0 | 0 | 0.0 | 40 | 100 |
Piperacillin-tazobactam | ≥ 128 | 32 – ≥ 128 | – | – | 0 | 0.0 | 40 | 100 |
Tigecycline | ≥ 16 | 1 – ≥ 16 | – | – | – | – | – | – |
MDR P. aeruginosa (n = 199) | ||||||||
Amikacin | ≥ 128 | 0.5 – ≥ 128 | 136 | 68.3 | – | – | 63 | 31.7 |
Aztreonam | 64 | 4 – ≥ 256 | – | – | 88 | 44.2 | 111 | 55.8 |
Cefepime | ≥ 64 | 2 – ≥ 64 | – | – | 45 | 22.6 | 154 | 77.4 |
Ceftazidime | ≥ 256 | 2 – ≥ 256 | – | – | 32 | 16.1 | 167 | 83.9 |
Ceftazidime-avibactam | 64 | 1 – ≥ 256 | 145 | 72.9 | – | – | 54 | 27.1 |
Ciprofloxacin | ≥ 8 | ≤ 0.12 – ≥ 8 | – | – | 51 | 25.6 | 148 | 74.4 |
Colistin | 2 | 0.25 – ≥ 16 | 198 | 99.5 | – | – | 1 | 0.5 |
Gentamicin | ≥ 32 | ≤ 0.12 – ≥ 32 | – | – | – | – | – | – |
Imipenem | ≥ 16 | 0.5 – ≥ 16 | – | – | 54 | 27.1 | 145 | 72.9 |
Levofloxacin | ≥ 16 | ≤ 0.25 – ≥ 16 | – | – | 38 | 19.1 | 161 | 80.9 |
Meropenem | ≥ 32 | ≤ 0.06 – ≥ 32 | 40 | 20.1 | 46 | 23.1 | 113 | 56.8 |
Piperacillin-tazobactam | ≥ 128 | 8 – ≥ 128 | – | – | 20 | 10.1 | 179 | 89.9 |
Tigecycline | ≥ 16 | 1 – ≥ 16 | – | – | – | – | – | – |
MEM-R P. aeruginosa (n = 125) | ||||||||
Amikacin | ≥ 128 | 1 – ≥ 128 | 82 | 65.6 | – | – | 43 | 34.4 |
Aztreonam | 64 | 4 – ≥ 256 | – | – | 68 | 54.4 | 57 | 45.6 |
Cefepime | ≥ 64 | 2 – ≥ 64 | – | – | 39 | 31.2 | 86 | 68.8 |
Ceftazidime | ≥ 256 | 2 – ≥ 256 | – | – | 30 | 24.0 | 95.0 | 76.0 |
Ceftazidime-avibactam | 64 | 2 – ≥ 256 | 82 | 65.6 | – | – | 43 | 34.4 |
Ciprofloxacin | ≥ 8 | ≤ 0.12 – ≥ 8 | – | – | 23 | 18.4 | 102 | 81.6 |
Colistin | 2 | 0.25 – 2 | 125 | 100 | – | – | 0 | 0.0 |
Gentamicin | ≥ 32 | 0.25 – ≥ 32 | – | – | – | – | – | – |
Imipenem | ≥ 16 | 1 – ≥ 16 | – | – | 2 | 1.6 | 123 | 98.4 |
Levofloxacin | ≥ 16 | 0.5 – ≥ 16 | – | – | 11 | 8.8 | 114 | 91.2 |
Piperacillin-tazobactam | ≥ 128 | 4 – ≥ 128 | – | – | 23 | 18.4 | 102 | 81.6 |
Tigecycline | ≥ 16 | 1 – ≥ 16 | – | – | – | – | – | – |
MEM-R, MBL-negative P. aeruginosa (n = 103) | ||||||||
Amikacin | 64 | 1 – ≥ 128 | 75 | 72.8 | – | – | 28 | 27.2 |
Aztreonam | 64 | 4 – ≥ 256 | – | – | 55 | 53.4 | 48 | 46.6 |
Cefepime | 32 | 2 – ≥ 64 | – | – | 37 | 35.9 | 66 | 64.1 |
Ceftazidime | 128 | 2 – ≥ 256 | – | – | 30 | 29.1 | 73 | 70.9 |
Ceftazidime-avibactam | 16 | 2 – ≥ 256 | 81 | 78.6 | – | – | 22 | 21.4 |
Ciprofloxacin | ≥ 8 | ≤ 0.12 – ≥ 8 | – | – | 18 | 17.5 | 85 | 82.5 |
Colistin | 2 | 0.25 – 2 | 103 | 100 | – | – | 0 | 0.0 |
Gentamicin | ≥ 32 | 0.25 – ≥ 32 | – | – | – | – | – | – |
Imipenem | ≥ 16 | 1 – ≥ 16 | – | – | 2 | 1.9 | 101 | 98.1 |
Levofloxacin | ≥ 16 | 0.5 – ≥ 16 | – | – | 8 | 7.8 | 95 | 92.2 |
Piperacillin-tazobactam | ≥ 128 | 4 – ≥ 128 | – | – | 22 | 21.4 | 81 | 78.6 |
Tigecycline | ≥ 16 | 1 – ≥ 16 | – | – | – | – | – | – |
MIC, minimum inhibitory concentration; DTR, difficult to treat; MDR, multidrug resistant; MEM-R, meropenem resistant; MBL, metallo-β-lactamase
Among the MEM-R P. aeruginosa, 82.4% (103/125) were identified as MBL-negative. All MBL-negative isolates were susceptible to colistin (Table 2), 78.6% to ceftazidime-avibactam and 72.8% to amikacin. A total of 29.1% of MBL-negative isolates were susceptible (increased exposure) to ceftazidime alone.
Among the 125 MEM-R isolates, 22 (17.6%) were MBL-positive and 29 (23.2%) were carbapenemase-positive. Colistin was the only agent active against the MBL-positive isolates (100% susceptible, data not shown).
Enterobacterales
Susceptibility to amikacin, ceftazidime-avibactam, colistin and meropenem against Enterobacterales was ≥ 96.1%, and to ceftazidime alone, 69.5% (Table 3). Susceptibility to tigecycline was 99.8% (E. coli and C. koseri, only).
Table 3.
Antimicrobial | MIC90 (mg/L) | MIC range (mg/L) | Susceptible, standard dosing | Susceptible, increased exposure | Resistant | |||
---|---|---|---|---|---|---|---|---|
Enterobacterales (n = 1639) | n | % | n | % | n | % | ||
Amikacin | 8 | ≤ 0.25 – ≥ 128 | 1575 | 96.1 | – | – | 64 | 3.9 |
Amoxicillin-clavulanate | ≥ 32 | ≤ 0.12 – ≥ 32 | 923 | 56.3 | – | – | 716 | 43.7 |
Aztreonam | 64 | ≤ 0.015 – ≥ 256 | 1157 | 70.6 | 39 | 2.4 | 443 | 27.0 |
Cefepime | ≥ 64 | ≤ 0.12 – ≥ 64 | 1198 | 73.1 | 70 | 4.3 | 371 | 22.6 |
Ceftazidime | 64 | ≤ 0.015 – ≥ 256 | 1139 | 69.5 | 52 | 3.2 | 448 | 27.3 |
Ceftazidime-avibactam | 0.5 | ≤ 0.015 – ≥ 256 | 1626 | 99.2 | – | – | 13 | 0.8 |
Ciprofloxacin | ≥ 8 | ≤ 0.12 – ≥ 8 | 1092 | 66.6 | 45 | 2.7 | 502 | 30.6 |
Colistina | 1 | ≤ 0.06 – ≥ 16 | 1304 | 97.9 | – | – | 28 | 2.1 |
Gentamicin | ≥ 32 | ≤ 0.12 – ≥ 32 | 1314 | 80.2 | – | – | 325 | 19.8 |
Imipenem | 2 | ≤ 0.06 – ≥ 16 | 1362 | 83.1 | 231 | 14.1 | 46 | 2.8 |
Levofloxacin | ≥ 16 | ≤ 0.25 – ≥ 16 | 1170 | 71.4 | 87 | 5.3 | 382 | 23.3 |
Meropenem | 0.12 | ≤ 0.06 – ≥ 32 | 1587 | 96.8 | 22 | 1.3 | 30 | 1.8 |
Piperacillin-tazobactam | ≥ 128 | ≤ 0.12 – ≥ 128 | 1240 | 75.7 | – | – | 399 | 24.3 |
Tigecyclineb | 2 | 0.06 – 8 | 472 | 99.8 | 0 | 0.0 | 1 | 0.2 |
DTR Enterobacterales (n = 21) | ||||||||
Amikacin | ≥ 128 | 2 – ≥ 128 | 12 | 57.1 | – | – | 9 | 42.9 |
Amoxicillin-clavulanate | ≥ 32 | ≥ 32 | 0 | 0.0 | – | – | 21 | 100 |
Aztreonam | ≥ 256 | 16 – ≥ 256 | 0 | 0.0 | 0 | 0.0 | 21 | 100 |
Cefepime | ≥ 64 | 32 – ≥ 64 | 0 | 0.0 | 0 | 0.0 | 21 | 100 |
Ceftazidime | ≥ 256 | 32 – ≥ 256 | 0 | 0.0 | 0 | 0.0 | 21 | 100 |
Ceftazidime-avibactam | ≥ 256 | 0.5 – ≥ 256 | 16 | 76.2 | – | – | 5 | 23.8 |
Ciprofloxacin | ≥ 8 | 4 – ≥ 8 | 0 | 0.0 | 0 | 0.0 | 21 | 100 |
Colistina | 2 | 0.25 – ≥ 16 | 20 | 95.2 | – | – | 1 | 4.8 |
Gentamicin | ≥ 32 | 0.5 – ≥ 32 | 8 | 38.1 | – | – | 13 | 61.9 |
Imipenem | ≥ 16 | ≥ 16 | 0 | 0.0 | 0 | 0.0 | 21 | 100 |
Levofloxacin | ≥ 16 | 2 – ≥ 16 | 0 | 0.0 | 0 | 0.0 | 21 | 100 |
Meropenem | ≥ 32 | ≥ 32 | 0 | 0.0 | 0 | 0.0 | 21 | 100 |
Piperacillin-tazobactam | ≥ 128 | ≥ 128 | 0 | 0.0 | – | – | 21 | 100 |
Tigecyclineb | 2 | 0.25 – 4 | – | – | – | – | – | – |
MDR Enterobacterales (n = 410) | ||||||||
Amikacin | 16 | 0.5 – ≥ 128 | 366 | 89.3 | – | – | 44 | 10.7 |
Amoxicillin-clavulanate | ≥ 32 | 2 – ≥ 32 | 108 | 26.3 | – | – | 302 | 73.7 |
Aztreonam | ≥ 256 | 0.03 – ≥ 256 | 5 | 1.2 | 6 | 1.5 | 399 | 97.3 |
Cefepime | ≥ 64 | ≤ 0.12 – ≥ 64 | 35 | 8.5 | 39 | 9.5 | 336 | 82.0 |
Ceftazidime | ≥ 256 | 0.25 – ≥ 256 | 5 | 1.2 | 12 | 2.9 | 393 | 95.9 |
Ceftazidime-avibactam | 2 | 0.06 – ≥ 256 | 397 | 96.8 | – | – | 13 | 3.2 |
Ciprofloxacin | ≥ 8 | ≤ 0.12 – ≥ 8 | 69 | 16.8 | 9 | 2.2 | 332 | 81.0 |
Colistina | 1 | 0.12 – ≥ 16 | 371 | 94.4 | – | – | 22 | 5.6 |
Gentamicin | ≥ 32 | ≤ 0.12 – ≥ 32 | 180 | 43.9 | – | – | 230 | 56.1 |
Imipenem | 4 | 0.12 – ≥ 16 | 347 | 84.6 | 26 | 6.3 | 37 | 9.0 |
Levofloxacin | ≥ 16 | ≤ 0.25 – ≥ 16 | 120 | 29.3 | 45 | 11.0 | 245 | 59.8 |
Meropenem | 4 | ≤ 0.06 – ≥ 32 | 358 | 87.3 | 22 | 5.4 | 30 | 7.3 |
Piperacillin-tazobactam | ≥ 128 | 0.5 – ≥ 128 | 81 | 19.8 | – | – | 329 | 80.2 |
Tigecyclineb | 2 | 0.06 – 8 | 53 | 100 | 0 | 0.0 | 0 | 0.0 |
MEM-R Enterobacterales (n = 30) | ||||||||
Amikacin | ≥ 128 | 0.5 – ≥ 128 | 20 | 66.7 | – | – | 10 | 33.3 |
Amoxicillin-clavulanate | ≥ 32 | 16 – ≥ 32 | 0 | 0.0 | – | – | 30 | 100 |
Aztreonam | ≥ 256 | 0.25 – ≥ 256 | 2 | 6.7 | 0 | 0.0 | 28 | 93.3 |
Cefepime | ≥ 64 | 2 – ≥ 64 | 0 | 0.0 | 1 | 3.3 | 29 | 96.7 |
Ceftazidime | ≥ 256 | 0.5 – ≥ 256 | 1 | 3.3 | 0 | 0.0 | 29 | 96.7 |
Ceftazidime-avibactam | ≥ 256 | 0.12 – ≥ 256 | 21 | 70.0 | – | – | 9 | 30.0 |
Ciprofloxacin | ≥ 8 | ≤ 0.12 – ≥ 8 | 1 | 3.3 | 0 | 0.0 | 29 | 96.7 |
Colistina | 2 | 0.25 – ≥ 16 | 28 | 93.3 | – | – | 2 | 6.7 |
Gentamicin | ≥ 32 | 0.25 – ≥ 32 | 13 | 43.3 | – | – | 17 | 56.7 |
Imipenem | ≥ 16 | 2 – ≥ 16 | 2 | 6.7 | 2 | 6.7 | 26 | 86.7 |
Levofloxacin | ≥ 16 | 0.5 – ≥ 16 | 1 | 3.3 | 3 | 10.0 | 26 | 86.7 |
Piperacillin-tazobactam | ≥ 128 | 64 – ≥ 128 | 0 | 0.0 | – | – | 30 | 100 |
Tigecyclineb | 2 | 0.25 – 4 | – | – | – | – | – | – |
MEM-R, MBL-negative Enterobacterales (n = 20) | ||||||||
Amikacin | ≥ 128 | 0.5– ≥ 128 | 11 | 55.0 | – | – | 9 | 45.0 |
Amoxicillin-clavulanate | ≥ 32 | 16– ≥ 32 | 0 | 0.0 | – | – | 20 | 100 |
Aztreonam | ≥ 256 | 0.25– ≥ 256 | 1 | 5.0 | 0 | 0.0 | 19 | 95.0 |
Cefepime | ≥ 64 | 2– ≥ 64 | 0 | 0.0 | 1 | 5.0 | 19 | 95.0 |
Ceftazidime | ≥ 256 | 0.5– ≥ 256 | 1 | 5.0 | 0 | 0.0 | 19 | 95.0 |
Ceftazidime-avibactam | 4 | 0.12– ≥ 256 | 19 | 95.0 | – | – | 1 | 5.0 |
Ciprofloxacin | ≥ 8 | 4– ≥ 8 | 0 | 0.0 | 0 | 0.0 | 20 | 100 |
Colistina | 2 | 0.25– ≥ 16 | 18 | 90.0 | – | – | 2 | 10.0 |
Gentamicin | ≥ 32 | 0.25– ≥ 32 | 7 | 35.0 | – | – | 13 | 65.0 |
Imipenem | ≥ 16 | 2– ≥ 16 | 2 | 10.0 | 2 | 10.0 | 16 | 80.0 |
Levofloxacin | ≥ 16 | 1– ≥ 16 | 0 | 0.0 | 1 | 5.0 | 19 | 95.0 |
Piperacillin-tazobactam | ≥ 128 | 64– ≥ 128 | 0 | 0.0 | – | – | 20 | 100 |
Tigecyclineb | 2 | 0.25–4 | – | – | – | – | – | – |
MIC, minimum inhibitory concentration; ESBL, extended-spectrum β-lactamase; DTR, difficult to treat; MDR, multidrug resistant; MEM-R, meropenem resistant; MBL, metallo-β-lactamase
aFor colistin, Morganella morganii, Proteus spp., Providencia spp. and Serratia spp. were excluded from analysis because of their intrinsic resistance; therefore, number of isolates tested against colistin: Enterobacterales, n = 1332; ESBL-positive Enterobacterales, n = 297; DTR Enterobacterales, n = 21; MDR Enterobacterales, n = 393; MEM-R Enterobacterales, n = 30; MBL-negative Enterobacterales, n = 20
bFor tigecycline, susceptibility and resistance rates among the Enterobacterales were only calculated for Escherichia coli and Citrobacter koseri as EUCAST breakpoints are only approved against these species: Enterobacterales, n = 473; ESBL-positive Enterobacterales, n = 66; DTR Enterobacterales, n = 1; MDR Enterobacterales, n = 53; MEM-R Enterobacterales, n = 1; MBL-negative Enterobacterales, n = 1. Percentages not given when < 10 isolates. MIC90 and MIC range data for tigecycline are calculated for all Enterobacterales collected
Of the Enterobacterales, 1.3% (21/1639) were DTR and 25.0% (410/1639) were MDR. Among MDR isolates, susceptibility rates were highest to ceftazidime-avibactam (96.8%), colistin (94.4%) and tigecycline (100%, E. coli and C. koseri only), and among DTR isolates, ≥ 57.1% were susceptible to amikacin, ceftazidime-avibactam and colistin (Table 3). Few isolates were susceptible to ceftazidime alone (MDR, 1.2%; DTR, 0.0%).
Of the 30/1639 isolates that were MEM-R, 66.7% were susceptible to amikacin, 70% to ceftazidime-avibactam and 93.3% to colistin; however, only 3.3% were susceptible to ceftazidime alone. Of the 20 MEM-R, MBL-negative isolates, 95.0% were susceptible to ceftazidime-avibactam, 90.0% were susceptible to colistin and only one isolate was susceptible to ceftazidime alone. Ten MEM-R isolates were MBL-positive, of which 9 were amikacin-susceptible and all 10 were colistin-susceptible (data not shown). Among the 26/30 carbapenemase-positive isolates, 65.4% were susceptible to amikacin, 69.2% to ceftazidime-avibactam and 92.3% to colistin.
Discussion
Susceptibility among P. aeruginosa was highest to amikacin, ceftazidime-avibactam and colistin and among the Enterobacterales, to ceftazidime-avibactam, colistin and tigecycline (E. coli and C. koseri only), followed by meropenem and amikacin. Similar results have been reported for isolates collected in 2012–2015 across Europe [10, 11], although for colistin and tigecycline, susceptibility rates among Enterobacterales were lower than in our study [11]. This is likely due to inclusion of a broader range of species of Enterobacterales by Kazmierczak et al. [11]. Similar ATLAS data were also reported for Central Europe/Israel (2014–2018) [12], indicating that susceptibility rates to ceftazidime-avibactam, colistin and amikacin remain stable in the region. As previously reported [10, 11], susceptibility rates to ceftazidime alone were low compared with ceftazidime and avibactam combined, particularly among resistant subsets.
Among P. aeruginosa and Enterobacterales 5.7% and 1.3% were DTR, respectively. DTR is a valuable category, comprising isolates that are not susceptible to first-line, high-efficacy, low-toxicity agents [13]. The majority of DTR isolates in our study were susceptible to colistin (P. aeruginosa, 100%; Enterobacterales, 95.2%) and most DTR Enterobacterales were susceptible to ceftazidime-avibactam (76.2%); however, the rate was reduced against DTR P. aeruginosa (37.5% susceptible). Amikacin susceptibility rates against DTR isolates were 62.5% (P. aeruginosa) and 57.1% (Enterobacterales).
Most (82.4%) MEM-R P. aeruginosa were MBL-negative and, as with the other subsets in this analysis, their susceptibility was highest to ceftazidime-avibactam, amikacin and colistin. The susceptibility breakpoint for ceftazidime alone only applies at increased exposure, and susceptibility was low compared with ceftazidime-avibactam (29.1% vs. 78.6%), demonstrating the value of combining avibactam with ceftazidime. The other MEM-R isolates (17.6%) were MBL-positive, against which only colistin was active. A lower rate of Enterobacterales than P. aeruginosa were meropenem-resistant (1.8% vs. 17.8%), similar to the rates reported by Kristóf et al. [12]. Two thirds of MEM-R Enterobacterales were MBL-negative and, as reported previously [3], most were susceptible to ceftazidime-avibactam and colistin. As with P. aeruginosa, few Enterobacterales isolates were susceptible to ceftazidime alone, in line with previous reports [3], again demonstrating the value of the combination.
Overall, 55 (7.8%) P. aeruginosa isolates were resistant to ceftazidime-avibactam, similar to that reported for European isolates collected in 2012–2015 [10]. Of these, 23/55 were identified as carbapenemase producers (22 MBL-positive [7 IMP, 15 VIM] and 1 carbapenemase-positive [GES] but MBL-negative). No other GES-positive isolates were identified and for the remaining 32 isolates, no carbapenemase or MBL genes were detected. In contrast, 13 (0.8%) Enterobacterales isolates were identified as resistant to ceftazidime-avibactam and 12/13 isolates were MBL-positive (4 VIM, 8 NDM-1; Citrobacter freundii [n = 1], Enterobacter cloacae [n = 8] and K. pneumoniae [n = 3]). For the remaining isolate (E. coli), no carbapenemase or MBL genes were detected. Ceftazidime-avibactam is known to be inactive against MBL-producing isolates [3].
There are limitations to this analysis; the study collected a predetermined number of isolates from each centre and so cannot be considered epidemiological. With only 1 year of data, some isolate numbers are low, particularly in the resistance subsets, meaning that some of the data should be treated with some caution.
In conclusion, rates of susceptibility to ceftazidime-avibactam were high among isolates of P. aeruginosa and Enterobacterales collected from Croatia, Czech Republic, Hungary, Poland, Latvia and Lithuania in 2019 and were similar to activity reported in previous years for isolates collected in Europe. Amikacin and colistin also continue to be active against these Gram-negative isolates, as does tigecycline against isolates of E. coli and C. koseri. Meropenem susceptibility rates were high among Enterobacterales isolates but reduced against P. aeruginosa. Ceftazidime-avibactam continues to be a good choice for the treatment of MDR Gram-negative infections, it has a safety profile consistent with that previously observed for ceftazidime alone [14–17] and does not require therapeutic drug monitoring.
Acknowledgements
The authors would like to thank the staff at International Health Management Associates (IHMA) Inc. for their co-ordination of the study and also all investigators and laboratories for their participation in the study.
Author contribution
VA, IM, JS, LP, SB, SHH, AK, BM-P participated in data interpretation, as well as drafting and reviewing the manuscript. All authors read and approved the final manuscript.
Funding
This study is funded by Pfizer. Pfizer were involved in study design and the decision to submit the work for publication. Medical writing support was provided by Wendy Hartley, PhD, at Micron Research Ltd. (Ely, UK), and was funded by Pfizer. Micron Research Ltd. also provided data management services which were funded by Pfizer.
Data availability
The datasets generated and/or analysed during the current study are available from the corresponding author on reasonable request. Data from the global ATLAS study can be accessed at https://atlas-surveillance.com.
Declarations
Conflict of interest
IM and JS have no competing interests. VA has received support for conference registration from Pfizer spol. s r.o. LP has received honoraria for poster presentation from Pfizer Polska Sp. z o.o. SB, SHH, AK and BM-P are employees of Pfizer.
Footnotes
Publisher's note
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Data Availability Statement
The datasets generated and/or analysed during the current study are available from the corresponding author on reasonable request. Data from the global ATLAS study can be accessed at https://atlas-surveillance.com.