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. 2022 May 18;14(5):1087. doi: 10.3390/v14051087

Figure 2.

Figure 2

Comparison of identified sites with paraFix mutation for SARS-CoV-2 against positive selection sites and homoplasies. (A,B) The number of detected sites accumulated with time by considering fixed mutations, parallel mutations, and paraFix mutations in Spike protein (A) and N protein (B) of SARS-CoV-2. (C,D) The number of detected sites accumulated with time by considering homoplasies, positive selection sites (inferred with MEME in HyPhy), or paraFix mutation in S protein (C) and N protein (D).