Abstract
Phyllotaxis is commonly considered in the context of circular meristems or receptacles, yet non-circular (fasciated) structures also give rise to new primordia and organs. Here we investigate phyllotactic patterns in fasciated flower heads in the Asteraceae plant family. We begin by surveying the phenomenon of fasciation. We then show that phyllotactic patterns in fasciated heads can be generated by removing the inessential assumption of circularity from the previously published model of gerbera heads. To characterize these patterns, we revisit the conceptual framework in which phyllotactic patterns are commonly described. We note that some notions, in particular parastichies and parastichy numbers, maintain their significance in non-circular phyllotaxis, whereas others, in particular the divergence angle, need to be extended or lose their role. These observations highlight a number of open problems related to phyllotaxis in general, which may be elucidated by studies of fasciated heads.
Keywords: Asteraceae, CLAVATA, divergence angle, fasciation, Fibonacci number, flower head, Hofmeister hypothesis, modeling, parastichy, phyllotaxis
A survey and model of fasciated flower heads separate fundamental and derived characteristics of phyllotactic patterns and highlight open problems in phyllotaxis research.
Introduction
Phyllotaxis—the arrangement of plant organs—has attracted the interest of scientists for centuries (Schwabe, 1984; Adler et al., 1997; Barabé and Lacroix, 2020). To date, the most extensive studies have been carried out on the model plants Arabidopsis and tomato (Kuhlemeier, 2017), in which the initiation of organ primordia can be idealized as a process taking place at a radially symmetric shoot apical meristem (SAM) at regular time intervals, with the divergence angle between consecutive primordia close to 137.5° (Mündermann et al., 2005). In nature, however, phyllotactic patterns also arise in the absence of radial (or any other) symmetry and rhythmic production of primordia (Fig. 1). This scenario has received much less attention; consequently, the conceptual framework needed to describe phyllotaxis in the absence of radial symmetry is not well developed. Here we survey selected results and present a hypothetical model of phyllotactic patterns on fasciated meristems. In addition to being an interesting object of study themselves, these patterns provide an insight into the general mechanisms of phyllotaxis, and the application range of different parameters used to characterize them.
Our stepping stone is the recently developed model of phyllotaxis in the heads of Gerbera hybrida, a member of the large Asteraceae family of plants (Zhang et al., 2021). As in other Asteraceae species, florets in gerbera heads are typically arranged into Fibonacci numbers of conspicuous spirals (parastichies): 34 running in one direction and 55 running in the opposite direction (Fig. 1D, E). As shown by van Iterson (1907) and subsequently explored by Douady and Couder (1996), among others, in some plants such an arrangement may result from a continuous elaboration of the pattern from cotyledons to leaves on the stem to involucral bracts and florets in the head. However, in gerbera heads, spiral phyllotactic patterns with high Fibonacci parastichy numbers emerge de novo. The nature of the process resulting in such emergence has long been an open question (Green et al., 2008). Based on visualizations of auxin activity in transgenic gerbera lines, Zhang et al. (2021) proposed a model that provides an explanation. Although focused on circular heads, this model has also shown that transient departures of the patterning process from circular symmetry do not necessarily disturb the final pattern. This intriguing result, consistent with previous experimental data (Szymanowska-Pułka, 1994), has led us to the exploration of phyllotaxis in fasciated heads presented here. After a short overview of fasciation, we extend the gerbera model to fasciated heads and, in this context, we discuss how patterns in fasciated heads may contribute to the general understanding and characterization of phyllotaxis.
Phyllotaxis in fasciated meristems
Fasciation refers to shape changes in the shoot apex ranging from relatively mild distortions, such as elliptic rather than circular shapes, to drastic deformations such as strap- or ribbon-like shapes (Worsdell, 1905; White, 1948). These changes typically include enlargement or deformation of the meristem, which may affect organ arrangement and organ numbers, as well as widening and flattening of organs such as the floral stem. The resulting structures are commonly observed in distinct plant species across the plant kingdom and have traditionally been described as monstrosities or botanical curiosities (Masters, 1869; Schoute, 1936; White, 1948; Choob and Sinyushin, 2012). Phyllotactic patterning in fasciated meristems has not been extensively studied; below, we review selected results.
It is well established that the zonal organization of the SAM is regulated by the WUSCHEL (WUS)/CLAVATA3 (CLV3) feedback loop, which maintains the size of the stem cell niche and sets the context for robust organ initiation in the Arabidopsis thaliana model plant (reviewed by Gaillochet et al., 2015; Somssich et al., 2016; Fuchs and Lohmann, 2020). In various plant species, meristem enlargement is typically associated with genetic defects in this regulatory loop, CLV3 peptide perception or signaling, or CLV3-independent upstream regulators of WUS (reviewed by Soyars et al., 2016; Kitagawa and Jackson, 2019). In Arabidopsis, the mutants clv1, clv2, and clv3 all develop enlarged meristems due to the expanded WUS expression domain (Leyser and Furner, 1992; Fletcher et al., 1999; Schoof et al., 2000). The increase in meristem size begins in the embryo and continues in both vegetative and floral apices. Eventually, the inflorescence meristems in the strong clv1 and clv3 mutants grow as a ring, as a linear, strap-like structure, or as a large mass (Clark et al., 1993; Fletcher et al., 1999). In clv1 mutants, altered divergence angles lead to changes in the phyllotaxis of leaves (Leyser and Furner, 1992), and the spiral arrangement of flowers is lost due to the emergence of larger numbers of flower primordia at the apical meristems (Clark et al., 1993). In meristems with linear fasciation, numerous flower primordia form along the meristematic line (Clark et al., 1993). Likewise, in clv3 mutants, the primordia formed at the SAM periphery do not follow a recognizable phyllotactic pattern, although at a local scale the positions of new primordia are predictable: they emerge ‘in a wedge-shaped portion of the SAM periphery, between two older primordia that are still in direct contact with the SAM through the already formed axils, and whose developmental stages are preceding the sepal formation.’ (Szczęsny et al., 2009, p. 683). This observation is consistent with our hypothesis that phyllotactic patterns in asymmetric heads result from the normal local patterning mechanism operating in an unusual global context.
Apart from these often severe genetic effects, meristem shape can be affected by developmental constraints. For instance, the inflorescences in Drimys winteri (Winteraceae), a shrub representing a basal lineage of angiosperms, are racemes that develop elliptic lateral meristems, whereas the terminal meristems are larger and circular (Doust, 2001). The round terminal meristems initiate organs uniformly, with a constant divergence angle, in either a spiral or a whorled pattern. The elliptic meristems show greater diversity in phyllotactic patterns and initiate organs non-uniformly: first at the meristem poles, and only later along the sides. Doust (2001) proposed that this pattern could result from physical pressure, which inhibits organ initiation on the sides of the elliptic meristem. Alternatively, primordia could preferentially initiate at the poles because they are more distant from the meristem center, compared with the meristem sides.
Our recent data focus on understanding phyllotactic patterning in Asteraceae flower heads with high spiral numbers of florets (Zhang et al., 2021). The Asteraceae species may develop fasciated heads ranging from oval-shaped (Fig. 1B) to more severe ribbon-like phenotypes (Pavlovic et al., 2013). Phyllotactic patterns of flower heads have most extensively been recorded by Szymanowska-Pułka (1994), who examined over 1000 mature flower heads of Carlina acaulis L. and showed that most heads (93%) followed highly regular phyllotaxis with the main Fibonacci series. Notably, in her datasets, the floret spirals in the oval-shaped, fasciated flower heads still followed either exact Fibonacci numbers (cf. fig. 19) or multiples thereof in multijugate patterns (cf. figs 9a, 10a), indicating that departures from the circular head shape need not cause deviation in parastichy numbers. Outside Asteraceae, regular Fibonacci numbers of spirals were also detected in the strongly fasciated meristems of romanesco curds (cf. fig. 9D in Kieffer et al., 1998).
The genes that cause head fasciation are not known. Interestingly, as the gerbera head develops, the GhCLV3 expression domain expands, delineating the undifferentiated meristematic cells and the position of the active ring where the floret patterning occurs (Zhang et al., 2021). In contrast to Arabidopsis, the expanded CLV3 expression in gerbera does not result in uncontrolled cell proliferation, fasciation, or abnormalities in phyllotactic pattern, which indicates that the cell division regulation is not disrupted with respect to wild-type heads. In sunflower, a spontaneous mutant, stem fasciated (stf), was shown to be under the control of a single recessive gene, the identity of which is not known (Fambrini et al., 2006). The mutant plant developed an enlarged vegetative SAM leading to flat stems, whorled leaf arrangement, and enlarged head meristems, with extra apical domes on the meristem surfaces and multiple inflorescences (Fambrini et al., 2006). The usual phyllotactic pattern of heads with spiral numbers of 34 and 55 was lost. Interestingly, the individual florets developed normally, indicating that the mutation does not affect flower meristems.
In single flowers, analogous structures with linear fasciation can be found in association with highly increased organ numbers (polymery) (Endress, 2014). An extreme case is the ornamental plant Tupidanthus calyptratus (Araliaceae), which develops a butterfly-shaped flower meristem and an extremely high number (>100) of stamens and carpels arranged in highly meandering single whorls (Sokoloff et al., 2007). The numerous stamens develop simultaneously along the irregular meristematic rim, and the carpels form in alternating positions with the stamens. The flowers do not show radial symmetry at any stage of development. A related species, Schefflera subintegra, shows less extreme polymery, but still has large, elliptic flowers with tens of stamens and carpels in single whorls (Nuraliev et al., 2014). In mature flowers, the carpels are arranged in parallel rows facing each other. Molecular studies are needed to verify whether these phenotypes result from mutation(s) of the CLV gene(s) or modifications in other genes (e.g., those upstream of CLV3 or those targeting WUS independently of CLV), and to explore the underlying evolutionary trajectories behind these forms. An interesting question is whether these polymeric forms are maintained in nature because they possess some functional or ecological advantage.
The gerbera model of spiral phyllotaxis
The gerbera model (Zhang et al., 2021) was originally implemented on circular heads. Nevertheless, it does not fundamentally depend on the assumption of circularity; consequently, here we extend it to fasciated heads. The model is based on the Hofmeister (1868)/Snow and Snow (1931, 1952) hypothesis, according to which new primordia emerge in the organogenetic zone—referred to as the active ring—where and when there is enough space for them. This process is controlled by the interplay between the growth of the head meristem (receptacle) and the changing position of the active ring over time. The dynamics of this interplay divide phyllotactic patterning in gerbera heads into three phases.
Phase 1 (Fig. 2A) is essentially a one-dimensional process taking place on the active ring coinciding with the rim of a growing head. The first primordium is assumed to emerge in an arbitrary position on the rim. The subsequent rim expansion creates space into which new primordia are inserted. As the expansion continues, these primordia are displaced laterally, tending towards their older neighbors (Primordium 2 is a special case, with the direction of displacement chosen arbitrarily). As a result, the space between primordia is partitioned unevenly. For a range of displacement rates, this asymmetry leads to the progression of primordia numbers according to the Fibonacci sequence: 1, 2, 3, 5, 8, 13, ….
In Phase 2 (Fig. 2B), the pattern gradually acquires a two-dimensional character. While the head continues to grow, the active ring begins to dissociate itself from the rim. As a result, new primordia emerge closer to the head center than their older neighbors, creating a zig-zag pattern of ascending and descending segments of the pattern front. Elaborating upon the initial one-dimensional pattern, these oppositely oriented segments often appear in consecutive Fibonacci numbers.
Phase 3 (Fig. 2C) has a decidedly two-dimensional character. The space for the new primordia is created by the active ring that continues to propagate towards the head center, thus moving away from the primordia created earlier. The addition of new primordia elaborates the initial zig-zag pattern into a pattern of parastichies. With the ring shrinking, the number of parastichies decreases in jumps following the reversed Fibonacci sequence. Eventually, patterning is disrupted by the proximity of primordia formed at different points of the highly contracted ring, and the pattern becomes chaotic.
Extending the gerbera model to fasciated heads
The adaptation of the above model to fasciated heads requires addressing two questions. (i) How can the growth of the head, and the propagation of the active ring, be described in the non-circular case? (ii) What distance measure is suitable to evaluate the availability postulated by the Hofmeister/Snow and Snow hypothesis in the absence of circularity?
The growth of shoot apical meristems has already been analyzed in selected plants (e.g., Dumais and Kwiatkowska, 2002; Kwiatkowska, 2006; Kierzkowski et al., 2012), including several Asteraceae species (Hernandez 1995; Dosio et al., 2006; Zhang et al., 2021). Unfortunately, data pertinent to fasciated heads are difficult to obtain due to the relatively lower frequency of their occurrence and less stereotypical development. Consequently, here we model phyllotaxis on fasciated heads using two simplifying assumptions: that the receptacle is planar (flat) and that, in Phase 3, the growth of the head is negligible, with patterning driven by the propagation of the active ring. These assumptions focus the model on the curves representing the rim and the active ring.
In planar models of circularly symmetric phyllotaxis, all elements of the pattern are typically described using polar coordinates—in terms of distances from the head center and angles from a reference direction (Fig. 3A). For fasciated heads, this approach is impractical, because, in general, the head ‘center’ is no longer well defined. However, the curves representing the rim or the active ring may themselves serve as a reference. The development of these curves can then be described in terms of the propagation of each curve point in the normal directions, namely perpendicular to the (tangent to the) curve at that point (Sethian, 1999). This description reduces to the usual definition of growth in terms of changes to the radius in the circular case, but extends to any smooth curve. Another possibility, referred to as keyframe animation (Burtnyk and Wein, 1971; Mosca et al., 2018) and employed in our simulations, is the interpolation between globally defined curves representing snapshots of the rim or active ring positions over time (Fig. 3B, C). This method is particularly useful in descriptive models of head development, where the key frames represent empirical data. Different variants and combinations of both techniques are also possible.
The growth of circularly symmetric heads is commonly assumed to be rotationally invariant, which means that it is the same at each point of the rim. For fasciated heads, however, a more specific characterization of the rim expansion is needed. A suitable notion is intrinsic growth, quantified as the elongation of unit curve segments over time [relative elemental growth rate (REGR), reviewed by Peters and Bernstein (1997)]. In our simulations, we assumed that the REGR value is the same at all points of the curve, which implies that its length increases uniformly irrespective of the manner in which the curve is embedded in space.
The next question is how the availability of space for the insertion of new primordia should be measured (Schwabe, 1984). In the simulations we obtained the best results by defining the distance between two points as the length of the shortest path that connects them and lies entirely within the space between the head rim and the active ring (Fig. 3D). When the active ring coincides with the head rim, this distance is equivalent to the arc-length distance, measured along the rim curve; in the absence of obstacles and constraints, it amounts to the ‘usual’ straight-line Euclidean distance. As the exact computation of the path length is complicated (Hershberger et al., 2013), we approximated it numerically. A new primordium is inserted at a location on the expanding and/or propagating active ring if the minimum distance between this location and the centers of the existing primordia exceeds a presumed threshold value. We observed that, in the presence of the lateral displacement of primordia described by Zhang et al. (2021), uniform intrinsic expansion of the active ring leads to an increase of primordia numbers in Phase 1 according to the Fibonacci sequence for a range of displacement rates irrespective of the rim shape (Fig. 4A; Supplementary Video S1). An additional displacement of primordia in the normal direction, simulating the early separation of the active ring from the head rim, leads to the emergence of the zig-zag pattern in Phase 2. The subsequent gradual shrinking of the ring leads to the filling of the head with primordia in Phase 3, with the zig-zag pattern providing a template for the emerging parastichies. Following the Fibonacci numbers of oppositely oriented ‘zigs’ and ‘zags’, parastichies tend to occur in Fibonacci numbers, as in the circular case, although the shape of parastichies varies according to the local curvature of the rim (Fig. 4B, C), as observed in fasciated heads under natural conditions (Szymanowska-Pułka, 1994). The generated patterns also exhibit local transitions, or departures from regularity (Fig. 4B, C), as observed in real phyllotactic patterns (Szpak and Zagórska-Marek, 2011; Golé et al., 2016; Godin et al., 2020). The proposed extension of the gerbera model (Zhang et al., 2021) thus makes it possible to capture some essential features of phyllotactic patterns in fasciated heads.
We have also observed that the patterning process tends to produce gaps near the pattern closure (Fig. 4B, C)—a phenomenon also observed in circular heads (Fig. 1C, bottom), but exacerbated in linear closures. These gaps become better filled in the simulations that incorporate mechanical interactions between the distal parts of nearby florets, which push each other as they grow (Fig. 5; the interactions were simulated as described by Owens et al., 2016). We hypothesize that similar interactions affect the appearance of flower heads in nature.
Attributes of phyllotactic patterns in fasciated heads
Several parameters have been developed over time to characterize and quantify phyllotactic patterning. Whether patterns in fasciated structures also exhibit such characteristics is thus an interesting question. In the context of Brassica oleracea, Kieffer et al. (1998) observed that ‘for “romanesco” it was impossible to carry out the biometrical analysis because branch apical meristems did not display any radial symmetry; however, the Fibonacci parastichy system could be determined from the number of contact parastichies.’ This observation highlights that some properties—in this case, the possibility of discerning parastichies and their tendency to appear in Fibonacci numbers—robustly carry over to fasciated heads, whereas other properties lose their significance. A conspicuous example is the divergence angle, defined as the angle between consecutively arising primordia, measured with respect to the head center. It has the remarkable property that, in circular heads, it often converges to the golden angle—approximately 137.5°—which results from the division of the full angle (360°) according to the golden ratio (Fig. 6A). Analyzing flowers of D. winteri, Doust (2001) noted that, in elliptic patterns, the divergence angle is no longer constant and fluctuates. In more irregular heads, which do not have a well-defined center, the divergence angle cannot even be meaningfully defined. Does this imply that the theory of phyllotaxis on fasciated heads is fundamentally impoverished compared with its circular counterpart?
Fortunately, this is not the case. We have already seen that the angular and radial distances measured with respect to the head center can be replaced with more general notions of arc-length and normal distances. This generalization makes it possible to express ring propagation and Hofmeister’s principle in the radially symmetric and fasciated heads alike. Following the same idea, we can generalize the divergence angle into the divergence section; that is, the ratio in which consecutive primordia divide the length of the active ring (Fig. 6B, C; see also Ryan et al., 1991). Like the arc-length distance, the divergence section is an intrinsic geometric property of the pattern on a curve, meaning that it can be defined and measured irrespective of the curve shape. Moreover, especially in Phase 1, the interaction between existing primordia and the insertion of new primordia into the pattern is controlled by the arc-length distances. The resulting pattern properties are thus a function of these distances, not angles. The divergence angles are a derived notion, limited to the common, but special case of radially symmetric patterns. Their advantage is that they can be easily measured when the center of the pattern is identified, at least approximately.
In addition, the notions of divergence angle and divergence section put into focus the assumptions concerning the dynamics of primordia initiation. Since it is defined as the angle between consecutively arising primordia, irregularities in the order in which primordia are initiated affect the values of divergence angles (reviewed by Godin et al., 2020). Such irregularities are particularly pronounced when parastichy numbers are high (Douady and Couder, 1996; Zhang et al., 2021), and are exacerbated in fasciated heads. Nevertheless, it is often possible to disregard the precise order of primordia initiation (which, incidentally, may be difficult to identify experimentally), and order primordia at the head rim sequentially by assuming an approximately constant divergence section, close to the golden section, between consecutive primordia. This possibility suggests that, along with the parastichies, the divergence section may represent a robust characteristic of phyllotactic patterns, maintaining its significance irrespective of pattern symmetry and the dynamics of pattern formation.
Conclusions and outlook
We extended a previously developed model of phyllotaxis in gerbera (Zhang et al., 2021) to fasciated flower heads. A key to this extension was the observation that the gerbera model did not fundamentally depend on the assumption of circular symmetry. The extended model reproduced patterns of floret primordia observed in sample fasciated gerbera heads, as well as patterns of developed florets in fleabane (Erigeron sp.) heads (compare Figs 1 and 5). Specifically, it captured the arrangement of primordia and florets into conspicuous parastichies, the dependence of the parastichy shapes on the local curvature of the head rim, and the tendency of parastichies to occur in Fibonacci numbers in spite of the fasciation (Fig. 4). These features support the model, but also highlight the need for its further validation—one of the numerous challenging research problems posed by fasciation and patterning of fasciated meristems.
The open problems cross the boundaries of biology and mathematics. From a biological perspective, key questions include the regulation and dynamics of the fasciated head growth and active ring propagation. In vivo imaging of developing heads over an extended period of time, from the patterning of the first primordia in Phase 1 to the pattern closure at the end of Phase 3, is outside the capabilities of current experimental methods. The dynamics of head growth and phyllotactic patterning in non-fasciated gerbera heads were inferred from observations of different heads at different stages of development, as the current methods allow live-imaging of single heads only for a limited time (Zhang et al., 2021). For fasciated heads a similar approach is complicated by the diversity of head shapes and the relative rarity of the occurrence of fasciation. The study of mutants in which fasciation is common, such as the GhCLV3 mutants in gerbera, may alleviate the latter concern.
Mutants may also be helpful in studying the relationship between fasciation and meristem/receptacle size. As we noted earlier, the enlargement of meristems is often associated with fasciation; however, the causal nature of this link remains unclear. An explanation may answer the question of the origins of fasciation and, perhaps more importantly, elucidate the mechanisms that foster the approximately circular shape of ‘normal’ meristems.
The gerbera model and its fasciated extension are based on the Hofmeister/Snow and Snow hypothesis, according to which new primordia emerge when and where there is enough space for them. While intuitively clear, this criterion does not specify how the availability of space is measured. In the simulations shown here, we employed path length distance. It would be interesting to analyze, through molecular-level observations of all phases of patterning, if this distance indeed reflects the paths of information flow in developing flower heads and, more generally, properly captures the biological reality of measuring the availability of space. It would also be worthwhile to confirm through direct observation of auxin maxima that the essential element of Phase 1—the lateral displacement of primordia towards their older neighbors—occurs in fasciated heads as it does in circular heads (Zhang et al., 2021).
Of additional interest is the pattern closure at the end of Phase 3. In circular heads, this closure is manifested by the irregular placement of primordia in the small zone near the head center. In fasciated heads, closures are often linear. Examples of flowers with multiple carpels suggest that linear closures may even be branched (Endress, 2014). These closures create new types of neighborhood relationships, absent in the typical development of circular heads, and thus may provide additional information regarding the distance measures and positioning mechanisms in play. The underlying question is: how are the linear closures filled? Are the primordia themselves displaced to better fill the gaps? This possibility is of conceptual interest, as it could relate the observations of primordia displacement in radial (Galvan-Ampudia et al., 2020) and lateral (Zhang et al., 2021) directions to the contact pressure theory of phyllotaxis (Schwendener, 1878; Adler, 1974; Ridley, 1982), which postulates displacement of primordia as a means of obtaining better packing. Another (not mutually exclusive) possibility is that florets are attached to the receptacle in a pattern with gaps, but these gaps are masked by the subsequent tilting and bending of florets due to the mechanical interactions between their distal parts as they grow. We employed the latter technique in the simulations shown in Fig. 5, but the question of how the gaps are filled or masked in nature requires further detailed analysis of the developing heads.
From a mathematical point of view, fasciated heads suggest a re-examination of the fundamental notions used to describe and quantify phyllotactic patterns. It appears that they fall into two categories. (i) Some notions preserve their definitions and meaning in fasciated patterns. Examples include parastichies and meristic characteristics, that is the numbers of organs, such as bracts or ray florets, which are often related to the number of parastichies or florets on the rim (Battjes and Prusinkiewicz, 1998, and references therein). (ii) Other notions lose their significance or cannot be defined in fasciated structures. These are, above all, the notions that refer to the head center: the divergence angle, the distances of primordia measured from the pattern center, and the plastochron ratio, which is built on the basis of these distances (Jean, 1994; Barabé and Lacroix, 2020; Godin et al., 2020). Some of these notions can regain their relevance using an appropriately generalized definition, as we have shown by generalizing the divergence angle to the divergence section as an example.
In conclusion, studies of fasciated heads help focus attention on the essential properties of phyllotactic patterning, stemming directly from the mechanism of patterning captured by the Hofmeister/Snow and Snow hypothesis, while distinguishing them from the properties founded on additional assumptions, such as the circularity of the head. Despite centuries of research, phyllotaxis continues to generate fascinating research problems at the intersection of biology, mathematics, and computer science.
Supplementary data
The following supplementary data are available at JXB online.
Video S1. Simulation of phyllotactic patterning on a fasciated head.
Acknowledgements
We thank the reviewers for their constructive and insightful comments on the draft manuscript.
Contributor Information
Przemyslaw Prusinkiewicz, Department of Computer Science, University of Calgary, Calgary AB T2N 1N4, Canada.
Teng Zhang, Department of Agricultural Sciences, Viikki Plant Science Centre, University of Helsinki, 00014 Helsinki, Finland.
Andrew Owens, Department of Computer Science, University of Calgary, Calgary AB T2N 1N4, Canada.
Mikolaj Cieslak, Department of Computer Science, University of Calgary, Calgary AB T2N 1N4, Canada.
Paula Elomaa, Department of Agricultural Sciences, Viikki Plant Science Centre, University of Helsinki, 00014 Helsinki, Finland.
Rainer Melzer, University College Dublin, Ireland.
Author contributions
PP, PE, TZ, MC, and AO: project conceptualization; PP and PE: project administration, writing; TZ: investigation—SEM imaging and analysis; PP, MC, and AO: investigation—computational modeling; PP, TZ, and AO: visualization; PP, PE, TZ, MC, and AO: manuscript review and editing, contributions to specific sections.
Conflict of interest
The authors declare the absence of a conflict of interest.
Funding
The support of this work by the Academy of Finland (grants 1310318 and 1341774 to PE), the Natural Sciences and Engineering Research Council of Canada (Discovery Grant 2019-06279 to PP), the Plant Phenotyping and Imaging Research Centre/Canada First Research Excellence Fund (PP and MC) is gratefully acknowledged.
Data availability
The models used to generate phyllotactic patterns on fasciated heads are available at algorithmicbotany.org/papers/fasciation2022.html. Their execution requires the Virtual Laboratory plant modeling software available at algorithmicbotany.org/virtual_laboratory.
References
- Adler I. 1974. A model of contact pressure in phyllotaxis. Journal of Theoretical Biology 45, 1–79. [DOI] [PubMed] [Google Scholar]
- Adler I, Barabé D, Jean, RV.. 1997. A history of the study of phyllotaxis. Annals of Botany 80, 231–244. [Google Scholar]
- Barabé D, Lacroix CR.. 2020. Phyllotactic patterns: a multidisciplinary approach. Singapore: World Scientific. [Google Scholar]
- Battjes J, Prusinkiewicz P.. 1998. Modeling meristic characters of Asteracean flowerheads. In: Jean RV, Barabé D, eds. Symmetry in plants. Singapore: World Scientific, 281–312. [Google Scholar]
- Burtnyk N, Wein M.. 1971. Computer-generated key-frame animation. Journal of the Society of Motion Picture and Television Engineers 80, 149–153. [Google Scholar]
- Choob VV, Sinyushin AA.. 2012. Flower and shoot fasciation: from phenomenology to the construction of models of apical meristem transformations. Russian Journal of Plant Physiology 59, 530–545. [Google Scholar]
- Clark SE, Running MP, Meyerowitz EM.. 1993. CLAVATA1, a regulator of meristem and flower development in Arabidopsis. Development 119, 397–418. [DOI] [PubMed] [Google Scholar]
- Dosio GA, Tardieu F, Turc O.. 2006. How does the meristem of sunflower capitulum cope with tissue expansion and floret initiation? A quantitative analysis. New Phytologist 170, 711–722. [DOI] [PubMed] [Google Scholar]
- Douady S, Couder Y.. 1996. Phyllotaxis as a self-organizing iterative process. Parts I, II and III. Journal of Theoretical Biology 178, 255–312. [Google Scholar]
- Doust AN. 2001. The developmental basis of floral variation in Drimys winteri (Winteraceae). International Journal of Plant Sciences 162, 697–717. [Google Scholar]
- Dumais J, Kwiatkowska D.. 2002. Analysis of surface growth in shoot apices. The Plant Journal 31, 229–241. [DOI] [PubMed] [Google Scholar]
- Endress PK. 2014. Multicarpellate gynoecia in angiosperms: occurrence, development, organization and architectural constraints. Botanical Journal of the Linnean Society 174, 1–43. [Google Scholar]
- Fambrini M, Bonsignori E, Rapparini F, Cionini G, Michelotti V, Bertini D, Baraldi R, Pugliesi C.. 2006. Stem fasciated, a recessive mutation in sunflower (Helianthus annuus), alters plant morphology and auxin level. Annals of Botany 98, 715–730. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Fletcher JC, Brand U, Running MP, Simon R, Meyerowitz EM.. 1999. Signaling of cell fate decisions by CLAVATA3 in Arabidopsis shoot meristems. Science 283, 1911–1914. [DOI] [PubMed] [Google Scholar]
- Fuchs M, Lohmann JU.. 2020. Aiming for the top: non-cell autonomous control of shoot stem cells in Arabidopsis. Journal of Plant Research 133, 297–309. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gaillochet C, Daum G, Lohmann JU.. 2015. O cell, where art thou? The mechanisms of shoot meristem patterning. Current Opinion in Plant Biology 23, 91–97. [DOI] [PubMed] [Google Scholar]
- Galvan-Ampudia CS, Cerutti G, Legrand J, et al. 2020. Temporal integration of auxin information for the regulation of patterning. eLife 9, e55832. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Godin C, Golé C, Douady S.. 2020. Phyllotaxis as geometric canalization during plant development. Development 147, dev165878. [DOI] [PubMed] [Google Scholar]
- Golé C, Dumais J, Douady S.. 2016. Fibonacci or quasi-symmetric phyllotaxis. Part I: why? Acta Societatis Botanicorum Poloniae 85:3533 [Google Scholar]
- Green PB, Steele CS, Rennich SC.. 2008. How plants produce pattern: a review and a proposal that undulating field behavior is the mechanism. In: Jean RV, Barabé D, eds. Symmetry in plants. Singapore: World Scientific, 359–392. [Google Scholar]
- Hernandez LF. 1995. Pattern formation in the sunflower (Helianthus annuus L.) capitulum. Biophysical considerations. Biocell 19, 203–212. [Google Scholar]
- Hershberger J, Suri S, Yildiz H.. 2013. A near-optimal algorithm for shortest paths among curved obstacles in the plane. In: Proceedings of the Twenty-ninth Annual Symposium on Computational Geometry, 359–368. [Google Scholar]
- Hofmeister W. 1868. Allgemeine morphologie der gewächse. Leipzig: Engelmann. [Google Scholar]
- Jean RV. 1994. Phyllotaxis: a systemic study in plant morphogenesis. Cambridge: Cambridge University Press. [Google Scholar]
- Kieffer M, Fuller MP, Jellings AJ.. 1998. Explaining curd and spear geometry in broccoli, cauliflower and ‘romanesco’: quantitative variation in activity of primary meristems. Planta 206, 34–43. [Google Scholar]
- Kierzkowski D, Nakayama N, Routier-Kierzkowska AL, Weber A, Bayer E, Schorderet M, Reinhardt D, Kuhlemeier C, Smith RS.. 2012. Elastic domains regulate growth and organogenesis in the plant shoot apical meristem. Science 335, 1096–1099. [DOI] [PubMed] [Google Scholar]
- Kitagawa M, Jackson D.. 2019. Control of meristem size. Annual Review of Plant Biology 70, 269–291. [DOI] [PubMed] [Google Scholar]
- Kuhlemeier C. 2017. Phyllotaxis. Current Biology 27, R882–R887. [DOI] [PubMed] [Google Scholar]
- Kwiatkowska D. 2006. Flower primordium formation at the Arabidopsis shoot apex: quantitative analysis of surface geometry and growth. Journal of Experimental Botany 57, 571–580. [DOI] [PubMed] [Google Scholar]
- Leyser OHM, Furner IJ.. 1992. Characterisation of three shoot apical meristem mutants of Arabidopsis thaliana. Development 116, 397–403. [Google Scholar]
- Masters MT. 1869. Vegetable teratology, an account of the principal deviations from the usual construction of plants. London: Robert Hardwicke. [Google Scholar]
- Mosca G, Adibi M, Strauss S, Runions A, Sapala A, Smith RS.. 2018. Modeling plant tissue growth and cell division. In: Morris RJ, ed. Mathematical modeling in plant biology. Cham: Springer, 107–138. [Google Scholar]
- Mündermann L, Erasmus Y, Lane B, Coen E, Prusinkiewicz P.. 2005. Quantitative modeling of Arabidopsis development. Plant Physiology 139, 960–968. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Nuraliev MS, Degtjareva GV, Sokoloff DD, Oskolski AA, Samigullin TH, Valiejo-Roman CM.. 2014. Flower morphology and relationships of Schefflera subintegra (Araliaceae, Apiales): an evolutionary step towards extreme floral polymery. Botanical Journal of the Linnean Society 175, 553–597. [Google Scholar]
- Owens A, Cieslak M, Hart J, Classen-Bockhoff R, Prusinkiewicz P.. 2016. Modeling dense inflorescences. ACM Transactions on Graphics 35, 136. [Google Scholar]
- Pavlovic NB, Korte MK, Mceachern AK, Grundel R, Survey USG.. 2013. First report of fasciation in Pitcher’s thistle, Cirsium pitcheri (Asteraceae). The Michigan Botanist 52, 58–66. [Google Scholar]
- Peters WS, Bernstein N.. 1997. The determination of relative elemental growth rate profiles from segmental growth rates (A Methodological Evaluation). Plant Physiology 113, 1395–1404. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ridley JN. 1982. Computer simulation of contact pressure in capitula. Journal of Theoretical Biology 95, 1–11. [Google Scholar]
- Ryan GW, Rouse JL, Bursill LA.. 1991. Quantitative analysis of sunflower seed packing. Journal of Theoretical Biology 147, 303–328. [Google Scholar]
- Schoof H, Lenhard M, Haecker A, Mayer KF, Jürgens G, Laux T.. 2000. The stem cell population of Arabidopsis shoot meristems in maintained by a regulatory loop between the CLAVATA and WUSCHEL genes. Cell 100, 635–644. [DOI] [PubMed] [Google Scholar]
- Schoute C. 1936. Fasciation and dichotomy. Recueil des Travaux Botaniques Néerlandais 33, 649–669. [Google Scholar]
- Schwabe WW. 1984. Phyllotaxis. In: Barlow PW, Carr DJ, eds. Positional controls in plant development. Cambridge: Cambridge University Press, 403–440. [Google Scholar]
- Schwendener S. 1878. Mechanische theorie der blattstellungen. Leipzig: Wilhelm Engelmann. [Google Scholar]
- Sethian JA. 1999. Level set methods and fast marching methods: evolving interfaces in computational geometry, fluid mechanics, computer vision, and materials science. Cambridge: Cambridge University Press. [Google Scholar]
- Snow M, Snow R.. 1931. Experiments on phyllotaxis. I. The effect of isolating a primordium. Philosophical Transactions of the Royal Society B: Biological Sciences 221, 1–43. [Google Scholar]
- Snow M, Snow R.. 1952. Minimum areas and leaf determination. Proceedings of the Royal Society B: Biological Sciences 139, 545–566. [DOI] [PubMed] [Google Scholar]
- Sokoloff DD, Oskolski AA, Remizowa MV, Nuraliev MS.. 2007. Flower structure and development in Tupidanthus calyptratus (Araliaceae): an extreme case of polymery among asterids. Plant Systematics and Evolution 268, 209–234. [Google Scholar]
- Somssich M, Je BI, Simon R, Jackson D.. 2016. CLAVATA–WUSCHEL signaling in the shoot meristem. Development 143, 3238–3248. [DOI] [PubMed] [Google Scholar]
- Soyars CL, James SR, Nimchuk ZL.. 2016. Ready, aim, shoot: stem cell regulation of the shoot apical meristem. Current Opinion in Plant Biology 29, 163–168. [DOI] [PubMed] [Google Scholar]
- Szczęsny T, Routier-Kierzkowska AL, Kwiatkowska D.. 2009. Influence of clavata3-2 mutation on early flower development in Arabidopsis thaliana: quantitative analysis of changing geometry. Journal of Experimental Botany 60, 679–695. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Szpak M, Zagórska-Marek B.. 2011. Phyllotaxis instability—exploring the depths of first available space. Acta Societatis Botanicorum Poloniae 80, 279–284. [Google Scholar]
- Szymanowska-Pułka J. 1994. Phyllotactic patterns in capitula of Carlina acaulis L. Acta Societas Botanicorum Poloniae 63, 229–245. [Google Scholar]
- van Iterson G. 1907. Mathematische und mikroskopish-anatomische Studien über Blattstellungen. Jena: Gustav Fischer Verlag. [Google Scholar]
- White OE. 1948. Fasciation. Botanical Review 14, 319–358. [Google Scholar]
- Worsdell WC. 1905. Fasciation: its meaning and origin. New Phytologist 4, 55–74. [Google Scholar]
- Zhang T, Cieslak M, Owens A, Wang F, Broholm SK, Teeri TH, Elomaa P, Prusinkiewicz P.. 2021. Phyllotactic patterning of gerbera flower heads. Proceedings of the National Academy of Sciences, USA 118, e2016304118. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Zhang T, Zhao Y, Juntheikki I, et al. 2017. Dissecting functions of SEPALLATA-like MADS box genes in patterning of the pseudanthial inflorescence of Gerbera hybrida. New Phytologist 216, 939–954. [DOI] [PubMed] [Google Scholar]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Data Availability Statement
The models used to generate phyllotactic patterns on fasciated heads are available at algorithmicbotany.org/papers/fasciation2022.html. Their execution requires the Virtual Laboratory plant modeling software available at algorithmicbotany.org/virtual_laboratory.