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. 2022 May 23;25(6):104452. doi: 10.1016/j.isci.2022.104452
REAGENT or RESOURCE SOURCE IDENTIFIER
Bacterial and virus strains

Escherichia coli: strain OP50-1 CGC OP50-1
https://cgc.umn.edu/strain/OP50-1

Chemicals, peptides, and recombinant proteins

all-trans-retinal Sigma-Aldrich Cat# R2500-25MG

Deposited data

Original data Mendeley Data https://doi.org/10.17632/sp25w5kxvd.1

Experimental models: Organisms/strains

wild-type strain Caenorhabditis Genetics Center (CGC) N2
https://cgc.umn.edu/strain/N2
ceh-17(np1) Ⅰ; fln-2(ot611) X CGC IB16
https://cgc.umn.edu/strain/IB16
ceh-17(np1) Ⅰ This study SLP769
ceh-14(ch3) X; fln-2(ot611) X CGC TB528
https://cgc.umn.edu/strain/TB528
lite-1(ce314) X; wtfIs5[Prab-3::NLS::GcaMP6s; Prab-3::NLS::tagRFP] (Hallinen et al., 2021) AML70
https://cgc.umn.edu/strain/AML70
hpIs459[Punc-4-GCaMP6s::mCherry + lin-15( + )] (Gao et al., 2018) ZM8428
https://cgc.umn.edu/strain/ZM8428
hpIs587 [Pflp-14::GcaMP6::mCherry, lin-15( + )] (Lim et al., 2016) ZM9078
https://cgc.umn.edu/strain/ZM9078
ceh-17(np1) Ⅰ; lite-1(ce314) X; wtfIs5[Prab-3:: NLS::GcaMP6s + Prab-3::NLS::tagRFP] This study SLP930
remEx394[Pver-3::ChR2(C128S)::GFP] This study SLP983
remEx396[Plet-23::GcaMP6s, Plet-23::mCherry] This study SLP984

Recombinant DNA

Prab-3::NLS::GCaMP6s, Prab-3::NLS::GCaMP6s Addgene RRID:Addgene_68119;
http://n2t.net/addgene:68119
pJH2447 Gift from Mei Zhen pJH2447
pDONR201 Gift from Yuichi Iino pDONR201
pPD-DEST Gift from Yuichi Iino pPD-DEST
pENTR-Pver-3 This study pYH343
pENTR-Plet-23 This study pYH344
pENTR-Pceh-17 This study pYH251
pPD-DEST-GCaMP6s This study pYh340
pPD-DEST-mCherry This study pYH12
pPD-DEST-ChR2(C128S)::GFP This study pYH110
Pver-3::ChR2(C128S)::GFP This study pYH348
Plet-23::GCaMP6s This study pYH346
Plet-23::mCherry This study pYH350
Pceh-17::ChR2(C128S)::GFP This study pYH342

Software and algorithms

Python (version 3.9) RRID: SCR_008394;
https://www.python.org/
Igor Pro 8 WaveMetrics, USA RRID:SCR_000325;
https://www.wavemetrics.com/
SPSS (version 28.0) IBM, USA RRID:SCR_019096;
https://www.ibm.com/products/spss-statistics
Fiji NIH, USA RRID:SCR_002285;
https://fiji.sc/
Script for Ca2+ imaging analysis This study; GitHub https://github.com/hayashi-laboratory/Worm_Ca_imaging
Script for behavioral analysis This study; GitHub https://github.com/hayashi-laboratory/Worm_behavior_analysis
Script for optogenetics This study; GitHub https://github.com/hayashi-laboratory/Worm_optogenetics