Abstract
Background
Coronavirus-induced disease 19 (COVID-19) infects more than three hundred and sixty million patients worldwide, and people with severe symptoms frequently die of acute respiratory distress syndrome (ARDS). Recent studies indicated that excessive neutrophil extracellular traps (NETs) contributed to immunothrombosis, thereby leading to extensive intravascular coagulopathy and multiple organ dysfunction. Thus, understanding the mechanism of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)-induced NET formation would be helpful to reduce thrombosis and prevent ARDS in severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection.
Methods
We incubated SARS-CoV-2 with neutrophils in the presence or absence of platelets to observe NET formation. We further isolated extracellular vesicles from COVID-19 patients' sera (COVID-19-EVs) to examine their ability to induce NET formation.
Results
We demonstrated that antagonistic mAbs against anti-CLEC5A mAb and anti-TLR2 mAb can inhibit COVID-19-EVs-induced NET formation, and generated clec5a−/−/tlr2−/− mice to confirm the critical roles of CLEC5A and TLR2 in SARS-CoV-2-induced lung inflammation in vivo. We found that virus-free extracellular COVID-19 EVs induced robust NET formation via Syk-coupled C-type lectin member 5A (CLEC5A) and TLR2. Blockade of CLEC5A inhibited COVID-19 EVs-induced NETosis, and simultaneous blockade of CLEC5A and TLR2 further suppressed SARS-CoV-2-induced NETosis in vitro. Moreover, thromboinflammation was attenuated dramatically in clec5a−/−/tlr2−/− mice.
Conclusions
This study demonstrates that SARS-CoV-2-activated platelets produce EVs to enhance thromboinflammation via CLEC5A and TLR2, and highlight the importance of CLEC5A and TLR2 as therapeutic targets to reduce the risk of ARDS in COVID-19 patients.
Supplementary Information
The online version contains supplementary material available at 10.1186/s12929-022-00832-z.
Keywords: Platelets, COVID-19, Neutrophil extracellular traps, CLEC2, CLEC5A, TLR2, Immunothrombosis, SARS-CoV-2, Acute respiratory distress syndrome, Spike protein
Introduction
SARS-CoV-2 is the etiological agent of the COVID-19 [1, 2], and has claimed more than 5.62 million lives worldwide. One of the clinical features of severe SARS-CoV-2 infection is extensive infiltration of neutrophils and macrophages in lung, and COVID-19 patients suffer from ARDS caused by extensive lung inflammation, tissue injury, and fibrosis [3]. In addition, pulmonary embolism [4, 5], microangiopathy, cerebral infarction, [6] and visceral organ thrombo-emboli are frequently observed in post-mortem autopsy of COVID-19 patients [7, 8].
Thrombotic complication is a major cause of morbidity and mortality in patients with COVID-19 [9]. Even though the pathogenesis of thrombo-emboli formation in COVID-19 patients is still unclear, recent studies indicate that excessive NET production is associated with thrombo-emboli formation in human diseases. It has been reported that elevated levels of cell-free DNA, myeloperoxidase, and citrullinated histone H3 are noted in the sera of COVID-19 patients, and higher levels of NET formation correlated with disease severity [10, 11]. Thus, targeting excessive NET formation is speculated to reduce pulmonary inflammation and thrombosis in COVID-19 patients [12].
Because platelets are hyperactivated in critically ill COVID-19 patients [13, 14], and platelets-neutrophil interactions play critical roles in endothelial damage and immunothrombosis of COVID-19 patients [15–17], we are interested to understand the molecular mechanism of platelets-mediated enhancement of NET formation and pulmonary inflammation in SARS-CoV-2 infection. Recently, SARS-CoV-2 was shown to activate platelets to enhance thrombosis in vivo [18], and serum levels of platelet-derived EVs (PLT-EVs) strongly associated with severity of SARS-CoV-2 infection [19]. Moreover, sera from COVID-19 patients trigger NET formation in neutrophils isolated from healthy donors [20]. These observations suggest that SARS-CoV-2 may activate platelets to release EVs, thereby induce NET formation and immunothrombosis in COVID-19 patients.
We have demonstrated that dengue virus (DV) [21–24] and microbes [25] bind and activate CLEC5A and TLR2 to release proinflammatory cytokines and promote NET formation. Moreover, DV activates Syk-coupled C-type lectin member 2 (CLEC2) in platelets to release EVs to enhance DV-induced NET formation and macrophage activation via CLEC5A and TLR2 [26, 27]. Recently, SARS-CoV-2 spike protein was reported to induce NETosis in Syk-dependent manner [28], suggesting that C-type lectins might play important roles in SARS-CoV-2-induced NET formation. Moreover, TLR2 was shown to sense SARS-CoV-2 membrane protein to activate NF-kB in monocyte and macrophages [29, 30]. Because CLEC5A and TLR2 are associated and co-activated by platelet-derived EVs (PLT-EVs) [26], we asked whether CLEC5A and TLR2 also contributed to SARS-CoV-2-induced immunothrombosis.
Here we report that COVID-19 EVs express abundant markers of activated platelets, and induce NET formation via CLEC5A and TLR2. Simultaneous blockade of CLEC5A and TLR2 inhibited SARS-CoV-2-induced NET formation in vitro, and thromboinflammation and fibrosis were dramatically attenuated in clec5a−/−/tlr2−/− mice. These observations suggest that EVs from virus-activated platelets play as endogenous danger signals to trigger NETs and inflammatory reactions via CLEC5A and TLR2, and blockade of CLEC5A and TLR2 may become a promising strategy to attenuate SARS-CoV-2-induced thrombus and coagulopathy in COVID-19 patients in the future.
Materials and methods
Reagents and antibodies
All culture media and buffers were purchased from Gibco. The source of anti-hCLEC5A mAb (clone 3E12A2) and anti-hTLR2 mAb (# MAB2616, R and D system) were as previously described [18]. Antibodies for immunofluorescence staining are as followings: rabbit anti-citrullinated histone H3 (#NB100-57135; Novus), goat anti-human/mouse myeloperoxidase polyclonal antibody (# AF3667, R&D system). Antibodies for immunohistochemical (IHC) staining are: rabbit anti-citrullinated histone H3 (#NB100-57135; Novus), goat anti-human/mouse myeloperoxidase polyclonal antibody (#AF3667, R&D system), anti-CD11b antibody (#ab13357, Abcam), anti-CD64 antibody (#MA5-29704, Invitrogen), anti-Siglec-F antibody (#PA5-11675, Invitrogen), anti-F4/80 antibody (#ab74383, Abcam), anti-CCR2 antibody (#NBP-35334, Novus Biologicals), anti-Ly6C antibody (#SC-23080, Santa Cruz). Secondary antibodies: donkey anti-mouse IgG (H + L) Alexa 488-conjugated antibody (#715-545-151, Jackson ImmunoResearch), donkey anti-goat IgG (H + L) Alexa 647-conjugated antibody (#705-605-147, Jackson ImmunoResearch), donkey anti-Human IgG (H + L) HRP-conjugated antibody (#709-035-149, Jackson ImmunoResearch), HRP-conjugated donkey anti-rabbit IgG (H + L) (#711-035-152, Jackson ImmunoResearch), HRP-conjugated donkey anti-goat IgG (H + L) (#SC-2020, Santa Cruz), HRP-conjugated donkey anti-mouse IgG (H + L) (#715-035-150, Jackson ImmunoResearch).
Isolation of human primary neutrophils and platelets
Blood was drawn from healthy donors (unvaccinated with SARS-CoV-2 vaccine) into an anticoagulant ACD-containing syringe (ACD: blood ratio = 1:6, v/v), platelet-rich plasma was collected by centrifuge at 230 × g for 15 min. Pellet of platelets was harvested by centrifugation at 1000 × g for 10 min, then suspended in Tyrode’s buffer. For human neutrophils, whole blood was laid on the Ficoll-Paque (GE Healthcare, 45-001-748) and centrifuged at 500 × g for 15 min to get red blood cells (RBCs)-granulocytes-rich layer. After RBC lysis, neutrophils were washed and suspended in RPMI containing 10% serum from unvaccinated blood type A/B healthy donors. The protocol was approved by the Human Subject Research Ethics, Academia Sinica (AS-IRB-BM-20025).
Isolation of mouse primary neutrophils and platelets
Platelets-rich plasma from murine peripheral blood was collected into ACD-containing Eppendorf and centrifugated at 230 × g for 4 min. Platelets were washed once and harvested by centrifugation at 1000 × g for 4 min, pellet was suspended in Tyrode’s buffer. For neutrophil isolation, bone marrow was collected and incubated with RBC lysis buffer. Bone marrow cells were suspended in a 45% Percoll solution, then laid on 52%, 63%, and 81% Percoll, and were further centrifugated at 1000 × g for 30 min. Neutrophils were harvested from layer 3 of the Percoll gradient, followed by washing with HBSS twice before being suspended in RPMI containing 10% FBS.
SARS-CoV-2 propagation
SARS-CoV-2 Taiwan/4/2020 was propagated in Vero E6 cells. Viral titer was determined by observation of the cytopathic effect (CPE) in Vero cells. This strain was used in all of the experiments.
Production and purification of pseudotyped lentivirus
The pseudotyped lentivirus carrying the SARS-CoV-2 spike protein was generated as described previously [31]. In brief, HEK-293 T cells were transiently transfected with pLAS2w.Fluc.Ppuro, pcDNA3.1-2019-nCoV-S, and pCMV-ΔR8.91 using TransITR-LT1 transfection reagent (Mirus). Cell debris was removed by centrifugation at 4000 × g for 10 min, followed by passing the supernatant through a 0.45 μm syringe filter (Pall Corporation). For pseudotyped virus purification and concentration, supernatant was mixed with 0.2 × volume of 50% PEG 8,000 (Sigma) and incubated at 4 °C for 2 h. The pseudotyped lentivirus was then recovered by centrifugation at 5000 × g for 2 h, and resuspended in sterilized phosphate-buffered saline, aliquoted, and stored at − 80 °C.
Mouse model for SARS-CoV-2 infection
Virus preparation and inoculation of SARS-CoV-2 into C57BL/6 and clec5a−/−/tlr2−/− mice were as described [32]. In brief, mice were intranasally injected with 3 × 1011 vg of AAV6/hACE2 in 50 μl saline before 14 days of SARS-CoV-2 inoculation, then C57BL/6 and clec5a−/−/tlr2−/− mice (N = 3 of each group) were intranasally changed with 1 × 105 TCID50 of SARS-CoV-2 in a volume of 100 μl. Lung tissue was collected at 3 days and 5 days post-infection for further analysis. All the animal experiments followed the protocol approved by the Institutional Animal Care and Use Committee (IACUC) at AS core (protocol ID 20-10-1521).
Collection of tissues for RNA isolation
Mice were sacrificed at 3 days and 5 days post-infection. For RNA isolation, lung was dug into TRizol-containing MagNA Lyser Green Beads (Roche) for tissue homogenization and further isolated RNA using TriRNA Pure Kit (Geneaid) according to the manufacturer’s instruction. cDNA was synthesized using the RevertAid First Strand cDNA Synthesis Kit and the real-time PCR was performed as followed conditions: 95 °C for 5 min, followed by 30 cycles of 15 s at 95 °C, 30 s at 58 °C, and 30 s at 72 °C. The primer sequences were listed in Additional file 2: Table S1. Data were shown as fold change compared to mock after normalized to GAPDH.
Immunohistochemistry (IHC)
Lung tissue was fixed in 10% paraformaldehyde for 48 h and embedded in paraffin subsequently. Tissue sections were deparaffined and rehydrated before H&E stain and multiple-color fluorescent staining using Opal 7-Color IHC Kits (Akoya bioscience). Samples were incubated with primary antibody (1:50) at 4 °C overnight, followed by incubation with secondary antibody (1:100) at room temperature for 1 h. The Opal fluorescent dye was applied according to the vendor’s instructions. Images were captured with a Leica confocal microscope with white light laser system (TCS SP8X-FALCON) and exported using the Leica Application Suite X software. The NET/thrombosis quantitation and cell population analysis by MetaMorph™ image software.
Collagen deposition
Lung sections were de-paraffined and re-hydrated before being stained with Picro Sirius Red Stain Kit (#ab150681, Abcam), and images were captured by a light microscope with polarized light (Nikon). Quantification of collagen was performed by MetaMorph™, and the level of collagen deposition was presented as area (μm2) of collagen under 20× and 40× magnification, repectively. For Masson’s trichrome stain, tissue sections were stained with Trichrome Stain (Masson) Kit (Sigma, # HT15-1KT), the level of pulmonary fibrosis was evaluated by the modified Ascroft scale as previously described [33].
Isolation of extracellular vesicles (EVs)
Plasma from healthy donors and COVID-19 patients with severe pneumonia were centrifugated at 3500 × g for 15 min to remove cells and debris. Supernatants were further centrifuged at 100,000 × g for 1.5 h at 4 °C. Pellets were washed with saline and centrifuged at 100,000 × g for 1.5 h at 4 °C, followed by resuspension in 1 ml of saline. The protein concentration of EVs was determined by DC protein assay (Bio-Rad) according to the manufacturer's instruction.
Surface markers measurement by flow cytometry
The EVs from healthy control (HC, n = 3) and COVID-19 patient (n = 10) plasma were suspended in saline, then stained with capture beads and detection reagents according to the manufacturer’s instruction. The surface markers level was measured by flow cytometry FACSVerse™ and presented as mean fluoresce intensity (MFI). Statistical analysis was calculated with an unpaired and nonparametric Student’s t-test with Mann–Whitney test. ns: no significant difference, *p < 0.05, **p < 0.01.
Induction of neutrophil extracellular traps (NETs)
Human neutrophils (4 × 105/ml) were seeded on poly-L-lysine-coated 12 mm coverslip in 24 well and simultaneously incubated with SARS-CoV-2 (MOI = 0.1 or 1) in presence of autologous platelets (4 × 106/ml) for 5 or 20 h at 37 °C. For SARS-CoV-2-spike pseudotyped virus stimulation, human neutrophils (4 × 105/ml) were incubated with SARS-CoV-2-spike pseudotyped virus (MOI = 0.25) and co-incubated with autologous platelets (4 × 106/ml) for 3 h at 37 °C. For blocking assay, neutrophils were preincubated with isotype (10 μg/ml), anti-CLEC5A mAb (10 μg/ml, clone 3E12A2), anti-TLR2 mAb (10 μg/ml, R&D system), or a mixture of anti-CLEC5A mAb and anti-TLR2 mAb for 30 min at room temperature before incubation with SARS-CoV-2. For EVs stimulation assay, neutrophil was incubated with EVs from the plasma of healthy controls (HC-EVs) or COVID-19 EVs for 3 h at 37 °C.
Visualization and quantification of NET structure
Cells were immersed in fixation buffer (containing 4% paraformaldehyde) overnight, followed by permeabilization using 0.5% Triton X100 in PBS, then incubated with anti-MPO antibody (1:100), anti-citrullinated histone antibody (1:100), and Hoechst 33342 (1:100,000). The level of NETs was calculated using the histone image captured by a Leica confocal microscope with white light laser system (TCS SP8 X-FALCON), and analyzed by MetaMorph™ software.
Mass spectrometry analysis and ingenuity pathways analysis (IPA)
Mass spectrometry analysis was performed in the Mass Spectrometry Core Facility located in the Genomic Research Center, Academia Sinica. In brief, EVs samples were lysed by RIPA solution containing phosphatase and protease inhibitors. Before the mass spectrometry analysis, samples were washed in PBS, followed by trypsin digestion before subjected to LTQ Orbitrap XL mass spectrometer (Thermo Fisher Scientific Inc.). Data were further analyzed by the Ingenuity Pathways Analysis (IPA) software. The significance of p-value was calculated by the right-tailed Fisher's Exact Test and shown as -log (p-values).
Statistical analysis
All the numbers of samples or mice were described in the figure legend, and the statistical significance was calculated using GraphPad Prism (version 9.0) software (GraphPad Software Inc., San Diego, CA, USA). Data were presented as mean ± SEM and the statistical significance was measured using an unpaired and nonparametric Student’s t-test with Mann–Whitney test. In all of the experiments, *p < 0.05, **p < 0.01, ***p < 0.001, ****p < 0.0001.
Results
SARS-CoV-2 induces robust NET formation in the presence of platelets
To understand the role of platelet in SARS-CoV-2-induced NET formation, SARS-CoV-2 were incubated with human neutrophils in the presence or absence of autologous platelets. At 5 h post-incubation with SARS-CoV-2 (MOI = 1) (2nd panel from left, Fig. 1a), SARS-CoV-2 alone induced colocalization of citrullinated histone (Cit-H3), chromosomal DNA, and myeloperoxidase (MPO) within neutrophils. In contrast, robust aggregated NETs were observed in the presence of platelets (4th panel from the left, Fig. 1a), which is distinct from the thread-like NET structure induced by DV/platelets [26]. The detail of NET structure was presented as separated panels in Additional file 1: Fig. S1 & S2, and the level of NETs was measured by Cit-H3 area (μm2) (Fig. 1b). These observations demonstrated the critical role of platelets in SARS-CoV-2-induced NET formation.
CLEC5A and TLR2 are critical in NET formation caused by SARS-CoV-2
Our previous works demonstrated that CLEC5A and TLR2 were critical for virus and microbes-induced NET formation [26, 27], thus we further asked whether CLEC5A and TLR2 contributed to SARS-CoV-2-induced NETosis. We found that SARS-CoV-2 alone induced NET formation in a higher dose (MOI = 1) at 5 h post-incubation (left, Fig. 1c). In the presence of platelets, SARS-CoV-2-induced NET formation was further enhanced (right, Fig. 1c). While NET formation was partially inhibited by anti-CLEC5A mAb and anti-TLR2 mAb, simultaneous blockade of CLEC5A and TLR2 almost completely suppressed SARS-CoV-2-induced NET formation (Fig. 1c). This observation suggests that platelet is a potent enhancer in SARS-CoV-2-induced NET formation.
We further incubated SARS-CoV-2 and SARS-CoV-2 plus platelets (SARS-CoV-2/platelets) with wild-type (WT) and clec5a−/−tlr2−/− neutrophils, respectively, in the absence (left, Fig. 1d) or presence of WT platelets (right, Fig. 1d). We found that SARS-CoV-2 and SARS-CoV-2/platelets-induced NET formation was partially attenuated in clec5a−/− neutrophils and tlr2−/− neutrophils, while NET formation was almost undetectable in clec5a−/−tlr2−/− neutrophils. This observation further confirms the critical roles of CLEC5A and TLR2 in SARS-CoV-2 and SARS-CoV-2/platelets-induced NET formation.
We further asked whether SARS-CoV-2 spike protein contributed to platelet activation by incubating SARS-CoV-2 spike pseudotyped virus with neutrophils for NETosis assay. We found that platelets still enhanced SARS-CoV-2 spike pseudotyped virus-induced NET formation, though the enhancing effect was less obvious than SARS-CoV-2. Blockade of TLR2 (green bar) and CLEC5A (blue bar) partially inhibited NET formation, simultaneous blockade of CLEC5A and TLR2 abolished SARS-CoV-2 spike pseudotyped virus-induced NET formation dramatically (Fig. 1e). This observation suggests that SARS-CoV-2 spike protein co-activates CLEC5A and TLR2 to induce NET formation.
COVID-19 EVs induced NET formation via CLEC5A
As COVID-19 sera was reported to induce NET formation [20], and serum levels of platelet-derived EVs (PLT-EVs) correlated with disease severity [19], we asked whether COVID-19 EVs induced NET formation was via CLEC5A and TLR2. Firstly, we compared the protein components of EVs isolated from serum samples of COVID-19 patients (COVID-19 EVs) and normal individuals (HC-EVs) by mass spectrometry, and data were analyzed by ‘Ingenuity Pathway Analysis’ (IPA, QIAGEN) software. We found that molecules involved in platelet degranulation (CD9, platelet factor 4 (PF4)), aggregation, and activation [CD9, CLEC1B (also known as CLEC2)] were upregulated dramatically in COVID-19 EVs, while none of these proteins were detectable in EVs from healthy donors (Fig. 2a). In addition to these upregulated molecules, proteins specifically expressed in COVID-19 EVs were listed in Table 1. We further confirmed the IPA results by flow cytometry analysis. We found that platelet activation markers (CD41a/b, CD62p), integrins (CD9, CD29, CD49e), adhesion molecules (CD31), and other activation marker (CD45, CD69) were upregulated (Fig. 2b, c). The change of surface marker expression with statistical significance is shown in Table 2. We then incubated neutrophils with HC-EVs and COVID-19 EVs, respectively, to compare their abilities to induce NET formation. While EVs from healthy control were unable to induce NET formation, COVID-19 EVs induced robust NET formation, which was blocked efficiently by anti-CLEC5A mAb, but not anti-TLR2 mAb (Fig. 2d). This observation suggests that COVID-19 EVs have potent activity to induce NET formation via CLEC5A.
Table 1.
Diseases or functions annotation | Molecules | Number of molecules | -log 10 (p-value) |
---|---|---|---|
Degranulation of cells | ACTN4, ACTR2, ADAM10, ALAD, ANPEP, APP, CALM1, CCT8, CD226, CD47, CD84, CD9, CNN2, COTL1, CYB5R3, CYFIP1, DBNL, DDOST, EEF1A1, ENDOD1, GDI2, GPI, HPSE, HSP90AB1, IQGAP2, LYN, MMRN1, NCKAP1L, PEBP1, PF4, PGRMC1, PTPN6, RAB10, RAB27B, RAB5C, RALB, SELP, SERPINB1, STX11, SYTL4, TGFB1 | 41 | 21.55752 |
Degranulation of phagocytes | ACTR2, ADAM10, ALAD, ANPEP, APP, CCT8, CD226, CD47, CD84, CD9, CNN2, COTL1, CYB5R3, CYFIP1, DBNL, DDOST, EEF1A1, GDI2, GPI, HPSE, HSP90AB1, IQGAP2, LYN, NCKAP1L, PEBP1, PF4, PGRMC1, PTPN6, RAB10, RAB5C, SERPINB1, STX11 | 32 | 16.71444 |
Aggregation of blood platelets | ALOX12, ANXA7, APP, CD47, CD9, CLEC2, GNAQ, GNAZ, GP5, LYN, MPIG6B, MYLK, P4HB, PDIA4, PTPN6, RAB27B, SELP, TGFB1, TREML1, VASP | 20 | 14.64782 |
Degranulation of neutrophils | ACTR2, ADAM10, ALAD, ANPEP, CCT8, CD47, CNN2, COTL1, CYB5R3, CYFIP1, DBNL, DDOST, EEF1A1, GDI2, GPI, HPSE, HSP90AB1, IQGAP2, NCKAP1L, PF4, PGRMC1, PTPN6, RAB10, RAB5C, SERPINB1, STX11 | 26 | 14.03905 |
Degranulation of blood platelets | ACTN4, APP, CALM1 (includes others), CD9, ENDOD1, LYN, MMRN1, PF4, RAB27B, SELP, SYTL4, TGFB1 | 12 | 9.527244 |
Chemotaxis of leukocytes | ADAM10, APP, CD47, CD9, DNM1L, GNAZ, HPSE, HSPD1, JAM3, LYN, MYLK, NCKAP1L, PF4, PLEC, PPIB, PRKCB, PTPN6, SELP, SERPINB1, TGFB1, TXN | 21 | 9.425969 |
Activation of blood platelets | CLEC2, GNAQ, GNB1, GP1BB, GP5, LYN, MPIG6B, PF4, PRKCB, PTPN6, SELP, TREML1, VASP | 13 | 9.191789 |
Cell movement of neutrophils | ADAM10, APP, CD47, CNN2, DNM1L, HSPB1, JAM3, LYN, MYLK, NCKAP1L, PF4, PRKCB, PTPN6, RTN4, SELP, SERPINB1, TGFB1, TXN, VASP | 19 | 8.793174 |
Immune response of cells | ACTR2, ANPEP, ANXA11, APP, CALR, CD226, CD47, CLIC4, CNN2, CORO1C, CYFIP1, DNM1L, EHD1, HSP90B1, HSPB1, IGHA2, KIF2A, LTBP1, LYN, NCKAP1L, PF4, PRKCB, PTPN6, RAB11A, RALB, TGFB1, VASP | 27 | 8.742321 |
Binding of blood platelets | APP, CD226, CD84, CLEC2, FYB1, GP5, JAM3, PPIB, SELP, VASP | 10 | 8.542118 |
Inflammatory response | ADAM10, APP, CD226, CD47, CD84, CD9, DNM1L, FKBP1A, GNAZ, GPX1, HPSE, HSPB1, HSPD1, JAM3, LTBP1, LYN, MAOB, MYLK, NCKAP1L, PF4, PLEC, PPIB, PRDX5, PRKCB, PTPN6, RALB, SELP, SERPINB1, TGFB1, TUBA1C, TXN | 31 | 8.271646 |
The mass spectrum analysis was performed using the LTQ Orbitrap XL mass spectrometer (Thermo Fisher Scientific Inc.) and the proteomics data were further analyzed by Ingenuity Pathways Analysis (IPA) software. The unique proteins present in EVs form COVID-19 patients (COVID19-EVs) were listed in the table according to the result of IPA analysis
Table 2.
Marker | Level in COVID-19 EVs (compared to HC-EVs) | p-value |
---|---|---|
CD42a | Upregulated | 0.0140 |
CD41b | Upregulated | 0.0140 |
CD29 | Upregulated | 0.0070 |
CD40 | Upregulated | 0.0070 |
CD31 | Upregulated | 0.0140 |
CD45 | Upregulated | 0.0070 |
CD69 | No significantly different | 0.1608 |
CD62p | Upregulated | 0.0140 |
HLA-ABC | No significantly different | 0.1119 |
CD9 | Upregulated | 0.0490 |
CD49e | Upregulated | 0.0070 |
CD63 | No significantly different | 0.1608 |
CD81 | No significantly different | 0.3706 |
CD3 | Upregulated | 0.0070 |
CD14 | Upregulated | 0.0070 |
HLA-DRDPDQ | No significantly different | 0.4685 |
CD56 | No significantly different | 0.1608 |
CD11c | Upregulated | 0.0070 |
CD4 | Upregulated | 0.0140 |
CD1c | No significantly different | 0.0769 |
CD2 | Upregulated | 0.0490 |
CD8 | Upregulated | 0.0490 |
CD326 | No significantly different | 0.0769 |
CD105 | No significantly different | 0.3706 |
SSEA-4 | No significantly different | 0.1608 |
CD20 | Downregulated | 0.0280 |
CD142 | Downregulated | 0.0140 |
CD86 | No significantly different | 0.0769 |
CD24 | No significantly different | 0.2168 |
CD25 | Downregulated | 0.0070 |
MCSP | Downregulated | 0.0070 |
CD146 | Downregulated | 0.0140 |
CD44 | Downregulated | 0.0070 |
CD133/1 | Downregulated | 0.0140 |
ROR1 | Downregulated | 0.0070 |
CD19 | Downregulated | 0.0070 |
CD209 | Downregulated | 0.0070 |
The surface markers of EVs from healthy control (HC) and COVID-19 patients were measured using MACSPlex Exosome Kit (Miltenyi Biotec, #130-108-813) by flow cytometry FACverse. The expression level were presented as mean fluorescence intensity (MFI) and the statistical analysis was calculated using GraphPad Prism (version 9.0) software with an unpaired and nonparametric Student’s t-test with Mann–Whitney test
CLEC5A and TLR2 are critical in SARS-CoV-2-induced thromboinflammation
We have used recombinant adeno-associated virus to introduce human ACE2 (hACE2) into wild type mice to establish a SARS-CoV-2 infection model system [32]. To evaluate the roles of CLEC5A and TLR2 in SARS-CoV-2-induced thromboinflammation, the AAV- hACE2 was introduced to wild-type littermates (WT) and clec5a−/−tlr2−/− mice to address this question. In WT mice, SARS-CoV-2 upregulated the expression of IL-6, IFN-γ, CCL-2, and IP-10 dramatically (more than 10 folds, p < 0.0001), while TNF-α, IL-1β, I L-10, and chemokines (CXCL1, CXCL2, CXCL5) were also upregulated (more than 10 folds, p < 0.0001) (Fig. 3a). Compared to WT mice, the expression of proinflammatory cytokines and chemokines were downregulated in clec5a−/−tlr2−/− mice. These observations demonstrated the critical role of CLEC5A and TLR2 in SARS-CoV-2-induced inflammatory reactions in lung tissues. We further detected NET formation in lung tissues after SARS-CoV-2 infection by examining the localization of DNA (blue), myeloperoxidase (green), citrullinated histone H3 (red), and platelet marker CD42b (yellow) (Fig. 3b and Additional file 1: Fig. S3). We found intense NET formation in lung tissue at day 3 and day 5 post-SARS-CoV-2 infection, while NET formation was almost undetectable in clec5a−/−tlr2−/− mice (Fig. 3b and Additional file 1:Fig. S3). The NET area and thrombi were further quantified by using anti-MPO antibody (Fig. 3c) and anti-CD42b antibody (Fig. 3d).
Moreover, severe infiltration of interstitial macrophages (CD11b+CD64+F4/80+), monocyte-derived dendritic cell (DC)/macrophage (MФ) (CD11b+CD64+Ly6C+), and Ly6C+ monocyte (gray column, Fig. 3e) into pulmonary area at day 3 post-SARS-CoV-2 infection were observed in WT mice. In contrast, cell infiltration was attenuated in clec5a−/−tlr2−/− mice (red column, Fig. 3e). These observations indicated that CLEC5A and TLR2 are critical in SARS-CoV-2-induced thromboinflammation in vivo.
Attenuation of lung collagen deposition in mice deficient of CLEC5A and TLR2
In addition to thromboinflammation, SARS-CoV-2 infection resulted in lung injury and pulmonary fibrosis, including thickening of basement membranes and deposition of collagen [34]. Thus, we were interested to understand whether CLEC5A and TLR2 contributed to SARS-CoV-2-induced collagen deposition. At day 5 post-infection, severe thickening of alveolar cell wall and cell infiltration were noted in WT mice (upper middle, Fig. 4a), while these phenomena were attenuated in clec5a−/−tlr2−/− mice after SARS-CoV-2 infection (upper right, Fig. 4a). We further examined the extent of collagen deposition by Masson’s trichrome (lower panels, Fig. 4a) and Picro Sirius Red Staining (Fig. 4b). We observed yellow-orange birefringence (type I collagen thick fiber) and green birefringence (type III collagen, thin fiber) in lung tissues of WT mice after SARS-CoV-2 infection (middle panels, Fig. 4b). In contrast, collagen deposition was attenuated in clec5a−/−tlr2−/− mice (right panels, Fig. 4b). The quantification of collagen deposition and pulmonary fibrosis (modified Ascroft scale) [33] was shown in Fig. 4c and d, respectively. These observations suggested that CLEC5A and TLR2 play critical roles in SARS-CoV-2-induced lung fibrosis. The quantitation of collagen area in lung was shown in Fig. 4b. Thus, we concluded that SARS-CoV-2 activated CLEC5A and TLR2 to induce lung inflammatory reactions, thrombosis, and collagen deposition, and PLT-EVs further enhanced NET formation via CLEC5A. These observations further suggested that EVs from virus-activated platelets are potent endogenous danger signals to enhance inflammatory reactions in vivo.
Discussion
It has been shown that lung is responsible for 50% of platelet biogenesis or 10 million platelets per hour [35]. Moreover, platelets were hyperactivated in clinically ill COVID-19 patients [13, 14], and contributed to coagulopathy in COVID-19 patients [18]. Thus, we are interested to understand the mechanism of platelet-mediated immunothrombosis in SARS-CoV-2 infection. In this study, we demonstrated that platelets enhanced SARS-CoV-2-induced NET formation (Additional file 1: Fig. S1). Moreover, SARS-CoV-2/platelets-induced NETs were detached from the coverslip and floated in the culture medium at 20 h post-incubation, resulting in less NETs attached to coverslip [Additional file 1: Fig. S2a (lower panel) and S2b (# above white column)]. This phenomenon was not observed in DV/platelets-induced NET formation, suggesting the aggregated floating NETs may contribute to microemboli in COVID-19 patients. Furthermore, SARS-CoV-2 and COVID-19 EVs induced NET formation via CLEC5A and TLR2, and clec5a−/−tlr2−/− mice were resistant to SARS-CoV-2-induced lung inflammation and collagen deposition. These observations suggest that platelets contribute to SARS-CoV-2-induced inflammation significantly, and blockade of CLEC5A and TLR2 may be beneficial to alleviate thromboinflammation and reduce intravascular coagulopathy in COVID-19 patients.
It has been shown that serum EV level correlates with disease severity in COVID-19 patients [36, 37]. Moreover, Syk inhibitor R406 was shown to prevent NETosis of healthy donor neutrophils stimulated with COVID-19 patient plasma [38]. In this study, we further demonstrated that COVID-19 EVs express abundant markers of activated platelets, enhance NET formation via CLEC5A and TLR2 (Fig. 3d). These observations are in accord with our previous report that DV activates platelets to release EVs, which are critical endogenous danger signals to trigger NET formation and inflammatory reactions via Syk-coupled CLEC5A and TLR2 [26, 27].
Recently, SARS-CoV-2 was shown to bind ACE2 in platelets to enhance NETosis [18]. However, mass spectrometry [39] and RNA-seq analyses [40, 41] did not detect ACE2 and TMPRSS2 in platelets and megakaryocytes. Increasing evidence indicates that lectins play critical roles in virus-induced systemic inflammation and NET formation [42]. C-type lectins (DC-SIGN and L-SIGN) and sialic acid-binding immunoglobulin-like lectin 1 (SIGLEC1) were shown to function as attachments receptors by enhancing ACE-2 mediated infection [43]. Furthermore, SARS-CoV-2 was reported to exacerbate inflammatory responses in myeloid cells through C-type lectin receptors and Tweety family members [44]. We have shown that DV was captured by DC-SIGN to activate the CLEC2 to release EVs from platelets [26]. Moreover, DV has been shown to be captured by C-type lectins heterocomplex (DC-SIGN and mannose receptor) to trigger inflammation and NETosis via CLEC5A and TLR2 [26, 27, 45]. Thus, it would be very interesting to test whether CLEC2/DC-SIGN complex is responsible for SARS-CoV-2-induced platelet activation in the future.
It has been reported that clinical symptoms, laboratory features and autopsy findings between dengue fever and COVID-19 are similar and are difficult to distinguish, and some patients who were initially diagnosed with dengue, but were later confirmed to have COVID-19 [46]. Moreover, autopsy of COVID-19 patients demonstrated that cells involved in the pathogenesis of COVID-19 and dengue are similar [47]. In this study, we found that platelets and platelet-derived EVs play critical roles in the pathogenesis of SARS-CoV-2. Unlike the thread shape of NET formation caused by DV, SARS-CoV-2-induced robust aggregated NET formation in the presence of platelets. Because the aggregated NETs may detach from SARS-CoV-2-induced thrombi and form micro-emboli in vivo, this observation can explain why intracoagulopathy was only found in COVID-19 patients, but not in DV-infected patients. Thus, inhibition of platelet activation may become a novel strategy to attenuate virus-induced lung inflammatory reactions in the future.
Conclusions
This work clearly demonstrates that PLT-EVs from COVID-19 patients can enhance thromboinflammation via CLEC5A and TLR2, and further shows that PLT-EVs from virus-activated act as endogenous danger signals to cause systemic inflammation. As serum levels of PLT-EVs strongly associated with severity of SARS-CoV-2 infection [19] and thromboemboli contribute to the morbidity of post-acute sequelae of COVID (PASC) [9], CLEC5A and TLR2 are promising therapeutic targets to attenuate thromboinflammation and reduce the risk of post-acute COVID-19 syndrome in the future.
Supplementary Information
Acknowledgements
This work was supported by Academia Sinica (AS-IDR-110-01, AS-GC-110-MD01), and Biotechnology Research Park Translational Project (AS-BRPT-110-02). The other supports are from Academia Sinica Investigator Award (AS-IA-109-L02), Ministry of Science and Technology (MOST 107-2321-B-001-015), and VGH, TSGH, AS Joint Research Program (VTA110-V5-5-1). We are grateful to Dr. Yu-Chi Chou to provide SARS-CoV-2 spike pseudotyped virus, and Dr. Jia-Tsrong Jan for technical support.
Author contributions
PSS designed, performed, analyzed experiments, and wrote the manuscript. SPY, YCP, CPS performed experiments, MHT provided animal models, SLH designed, analyzed experiments, data interpretation, and drafted and revised the manuscript. All authors read and approved the final manuscript.
Funding
This work was supported by Academia Sinica (AS-IDR-110-01, AS-GC-110-MD01), and Biotechnology Research Park Translational Project (AS-BRPT-110-02). The other supports are from Academia Sinica Investigator Award (AS-IA-109-L02), Ministry of Science and Technology (MOST 107-2321-B-001-015), and VGH, TSGH, AS Joint Research Program (VTA110-V5-5-1). We are grateful to Dr. Yu-Chi Chou to provide SARS-CoV-2 spike pseudotyped virus, and Dr. Jia-Tsrong Jan for technical support.
Availability of data and materials
The datasets generated and/or analyzed in the current study are not publicly available due to patient privacy, however they are available from the corresponding author on reasonable request.
Declarations
Ethics approval and consent to participate
This study was conducted under the Helsinki Declaration of 1975. All patients provided written informed consent before enrollment, and the study was approved by the Research Ethics Committee of Academia Sinica, Taipei (AS-IRB01-20024, AS-IRB01-20025). Statement of animal operation in BSL-3 biosafety animal facility: All mouse works were conducted in accordance with the “Guideline for the Care and Use of Laboratory Animals” as defined by the Council of Agriculture, Taiwan. Mouse work was approved by the Institutional Animal Care and Use Committee of Academia Sinica (protocol ID: 20-05-1471 and 19-07-1330). The Institutional Biosafety Committee of Academia Sinica approved work with infectious SARS-CoV-2 virus strains under BSL3 conditions. All sample processes were conducted according to “Interim Laboratory Biosafety Guidelines for Handling and Processing Specimens Associated with Coronavirus Disease 2019 (COVID-19)” recommended by CDC.
Consent for publication
Not applicable.
Competing interests
The authors declare that they have no competing interests.
Footnotes
Publisher's Note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
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Associated Data
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Supplementary Materials
Data Availability Statement
The datasets generated and/or analyzed in the current study are not publicly available due to patient privacy, however they are available from the corresponding author on reasonable request.