Table 2.
Berninamycin-related genes and their described function. Tü 2108 region 6_3 ORFs is compared to the homologous S. bernensis genes. Gene identity (ID) and similarity (SM) of compared amino acid sequences are shown in %. ORF = open reading frame
| Tü 2108 region 6_3 ORFs | Predicted gene product | Homologous S. bernensis gene | ID/SM (%) | Reference |
|---|---|---|---|---|
| 01231 | LmbE family protein | acyl transferase | 100/100 | AGN11661 |
| 01232 | rRNA methyl transferase | berJ | 99/100 | AGN11674 |
| 01233 | NocA homolog (C-terminal amide) | berI | 99/99 | AGN11673 |
| 01234 | cytochrome P450 | berH | 99/99 | KC894738 |
| 01235 | lanthipeptide dehydrogenase | berC | 99/100 | AGN11672 |
| 01236 | lanthipeptide dehydrogenase | berB | 97/98 | AGN11671 |
| 01237 | berninamycin prepeptide gene | berA | 98/100 | AGN11670 |
| 01238 | pyridine-forming | berD | 93/96 | AGN11669 |
| 01239 | YcaO cyclodehydratase | berG2 | 99/99 | AGN11668 |
| 01240 | YcaO cyclodehydratase | berG1 | 99/99 | AGN11667 |
| 01241 | McbC dehydrogenase | berE2 | 98/99 | AGN11665 |
| 01242 | McbC dehydrogenase | berE1 | 99/98 | AGN11666 |
| 01243 | elongation factor Tu | tufA/B | 100/100 | AGN11675 |
| 01244 | elongation factor G | fusA | 99/100 | AGN11662 |
| 01245 | 30S ribosomal protein S7 | rpsG | 100/100 | AGN11664 |
| 01246 | 30S ribosomal protein S12 | rpsL | 99/100 | AGN11663 |