Abstract
Pavlovian fear conditioning is a widely used behavioral paradigm for studying associative learning in rodents. Despite early recognition that subjects may engage in a variety of both conditioned and unconditioned responses, the last several decades have seen the field narrow its focus to measure freezing as the sole indicator of conditioned fear. We previously reported that female rats were more likely than males to engage in darting, an escape-like conditioned response that is associated with heightened shock reactivity. To determine how experimental parameters contribute to the frequency of darting in both males and females, we manipulated factors such as chamber size, shock intensity, and number of trials. To better capture fear-related behavioral repertoires in our animals, we developed ScaredyRat, an open-source custom Python tool that analyzes Noldus Ethovision-generated raw data files to identify darters and quantify both conditioned and unconditioned responses. We found that, like freezing, conditioned darting occurrences scale with experimental alterations. While most darting occurs in females, we found that with an extended training protocol, darting can emerge in males as well. Collectively, our data suggest that darting reflects a behavioral switch in conditioned responding that is a product of an individual animal's sex, shock reactivity, and experimental parameters, underscoring the need for careful consideration of sex as a biological variable in classic learning paradigms.
Pavlovian fear conditioning is an experimental paradigm used to study associative learning in rodents (Fanselow 1984; Maren 2001; Frankland et al. 2004). A neutral conditioned stimulus (CS; usually an auditory tone) is paired with an aversive unconditioned stimulus (US; usually an electric footshock). The US evokes an unconditioned response (UR) in the rodent, which learns to associate the CS with the US and ultimately exhibits a conditioned response (CR) when presented with the CS. The most commonly studied CR in Pavlovian fear conditioning is freezing, defined as the total lack of all movement except that required by respiration (Fanselow 1980). For decades, Pavlovian fear conditioning studies have relied solely on the amount of time an animal spends freezing as an indicator of both the level of fear that the animal is experiencing and the strength of the CS–US association. This reliance on a single behavior excludes from analysis any other CRs in which the animal might engage.
In 2015, our laboratory identified another CR: darting (Gruene et al. 2015). Darting is characterized by a quick movement across a fear conditioning chamber and occurs in ∼40% of female rats and ∼10% of males. Using a seven-CS–US auditory fear conditioning paradigm, we found that darting emerges during the later tones of the trial, often following earlier freezing responses. This pattern suggests that darting reflects a switch in conditioned responding that is more common in females. Since this initial report, other laboratories (and our own) have corroborated the finding that conditioned darting occurs primarily in female rats (Pellman et al. 2017; Colom-Lapetina et al. 2019; Greiner et al. 2019; Morena et al. 2021), but the significance of darting as a sex-biased conditioned fear response and the factors that modulate it have not been studied systematically. In contrast, a great deal of work has been done to examine the factors that affect conditioned freezing, including shock intensity (Fanselow 1982), context cues (Bolles and Collier 1976; Fanselow 1980), amount of pre-exposure to the context (Fanselow 1990), length of CS (Fanselow et al. 2019), and number of CS–US pairings (Maren 1998). However, these seminal studies did not consider the sex of the subjects as a potentially data-driving variable.
The goal of the present study was to determine the phenotypic scope and situational modulators of conditioned darting in both males and females. In other words, we asked whether the propensity to dart is predetermined (i.e., will always occur in the same proportion of males and females) or whether, like freezing, it can be manipulated by altering experimental parameters. We therefore investigated the influence of space, time, and shock intensity on conditioned fear behaviors in both male and female rats. To perform automated, unbiased detection of darting, freezing, and shock reactivity, our laboratory developed ScaredyRat, an open-access, custom Python tool that analyzes Noldus Ethovision-generated raw data files to identify darters and quantify behavior throughout a trial. Our findings advance our previous work by illuminating both the experimental conditions under which darting is more or less likely to occur and individual behavioral correlates of darting in both males and females. Overall, this work broadens the field's understanding of the multiple ways that male and female rodents can show conditioned fear, and underscores the need for more diverse behavioral considerations in classic learning paradigms (Shansky 2018).
Introducing ScaredyRat
ScaredyRat is an open-source, custom Python tool that we developed to assist Ethovision users in evaluating darting, freezing, and shock response behavior in rodent fear conditioning experiments. Graphical user interfaces (GUIs) for both Windows and Mac users, detailed user manuals, and code for Python-proficient users are available at https://github.com/trettels/ScaredyRat_ver2. ScaredyRat processes raw data files exported from Ethovision and generates spreadsheets for freezing, darting, and velocity metrics, organized according to user-defined epochs within an experimental session. These epochs can include, but are not limited to, CS presentation, US presentation, and any pre- or postepoch periods of time in which behavior may be of interest. In addition, ScaredyRat generates individual velocity plots (Fig. 1) for each subject with color-coded epochs and bouts of darting and freezing indicated. We note that ScaredyRat as currently designed can only process Ethovision data files. However, our open-source code is available for users who wish to adapt it to be used with other locomotion-tracking programs (e.g., AnyMaze).
Results
We used ScaredyRat to collect freezing, darting, and shock response velocity data in a series of experiments designed to (1) identify experimental conditions that may promote or suppress darting and (2) determine the relationship between these three behavioral metrics in both male and female rats. Definitions for each of these metrics are in the Materials and Methods.
Darting requires shock exposure
We began the current investigation by replicating our previous seven CS–US auditory-cued fear conditioning experiments in cohorts of male (n = 12) and female (n = 12) Sprague Dawley rats (Fig. 2A). As in our prior work (Gruene et al. 2015; Colom-Lapetina et al. 2019), only darts that occurred during the CS were used to classify animals as darters, and we once again found that females comprised the majority of darters (Fig. 2C). Also similar to these past reports, females exhibited greater shock responses than males (main effect of sex: F(1,22) = 8.2, P = 0.009) (Fig. 2B, left), a sex difference that appears to have been driven by darters (main effect of group: F(2,21) = 5.5, P = 0.01; adjusted post-hoc darters vs. nondarter males P = 0.009) (Fig. 2B, right). Although there were no overall sex differences in CS-elicited freezing during acquisition (Fig. 2D, left), a one-way ANOVA of average freezing in males, darters, and nondarter females produced a significant main effect of group (F(2,21) = 3.5, P < 0.05), with darters freezing significantly less than nondarting males (adjusted post-hoc P = 0.03). No sex differences or darting effects were observed on day 2 (Fig. 2E).
To investigate whether darting could be observed in the absence of a discrete CS, we next performed a 2-d context conditioning experiment in which adult male (n = 12) and female (n = 14) Sprague Dawley rats were exposed to seven footshocks with varying intertrial intervals, followed by a 6-min same-context exposure 24 h later (Fig. 2F). Darting for each trial was defined as any instance of a discrete movement that (1) reached the velocity threshold for darting (20 cm/sec) and (2) occurred outside the “shock” and 30-sec “postshock” derived epochs (see Fig. 1 for epoch illustration), as we view activity during these epochs as direct responses to the shock (i.e., unconditioned responses), rather than conditioned responses. Animals that exhibited at least one dart as just defined were classified as darters. With these criteria, 57% of females were classified as darters but no males were (Fig. 2H).
We next measured the shock response in all animals, defined as the maximum velocity with which the animal moves at the time of shock delivery (see “Behavioral Definitions” in the Materials and Methods). Although females appeared to increase their shock response as trials progressed (Fig. 2G, left), effects of sex on shock response neared but did not reach statistical significance (F(1,24) = 3.2, P = 0.08). However, when females were separated into darters and nondarters, darters exhibited a significantly higher average shock response than males (one-way ANOVA main effect of group: F(2,23) = 3.9, P = 0.03; post-hoc darters vs. males: P = 0.02) (Fig. 2G, right). Freezing levels for day 1 were sampled by assessing the percent time freezing during the 30 sec prior to each shock presentation to match the timing of freezing measurements taken in our standard cued conditioning experiments. A two-way ANOVA of freezing behavior during fear conditioning (Fig. 2I, left) revealed a significant time × sex interaction (F(2,48) = 5.6, P = 0.006), as well as significant main effects of time (F(2,44) = 117.2, P < 0.0001) and sex (F(1,24) = 4.7, P = 0.039), with females freezing significantly less than males. This sex effect appears to be driven by darters (Fig. 2I, right), as a one-way ANOVA of average freezing in males, darters, and nondarters during trial blocks 2–3 revealed a significant group effect (F(2,23) = 7.2, P = 0.004). An adjusted Dunnett's post-hoc test resulted in a significant difference between males and darters (P = 0.002) but not males and nondarters (P = 0.36).
On day 2, no darting was observed in either sex. Freezing behavior was assessed across the entire 6-min session in 90-sec time blocks (Fig. 2J, left), and we again found significant main effects of time (F(3,63) = 11.7, P < 0.0001) and sex (F(1,24) = 9.5, P = 0.005). To assess the contribution of darters to this effect, we performed a one-way ANOVA of average freezing across the session (Fig. 2F, right) and found a significant group effect (F(2,23) = 11.8, P = 0.0003). Adjusted Dunnett's post-hocs once again resulted in a significant difference between males and darters (P = 0.0002) but not males and nondarters (P = 0.61). We therefore demonstrate here that the engagement of a single darting response during context fear conditioning is sufficient to identify animals that exhibit increased shock responding during context conditioning and reduced conditioned freezing across multiple days. Putative sex differences in context fear conditioning experiments may therefore be driven by a subset of females that engage in darting behavior during training.
Finally, we asked whether darting could be observed in the absence of a US. Male (n = 13) and female (n = 10) rats were exposed to seven CS presentations in an identical chamber and with ITIs identical to the first experiment (Fig. 2K). No animals of either sex exhibited darting during CS presentation (Fig. 2L). As expected, CS-elicited freezing was extremely low, and no sex differences were observed (Fig. 2M).
Together, these data demonstrate that while exposure to a footshock US is necessary to observe conditioned darting, a discrete CS is not. To examine the possibility that darting is simply a random response to the shock and not a specific conditioned response, we generated trial-by-trial representations of darting for all three experiments (Fig. 3). We examined the prevalence of darting during the pretone (experiments 1 and 3) (Fig. 3A,C) or preshock epochs (experiment 2) (Fig. 3B) that preceded trials in which respective CS or ITI periods had high levels of darting. A χ2 test comparing pretone versus tone epochs in trials 5–7 of experiment 1 revealed a significant difference in females (χ2 = 5.3, P = 0.02), showing that darting is not reflective of a general increase in locomotor activity. Similarly, ITI darting was significantly more prevalent than in the preshock epoch for trials 3–6 in experiment 2 (χ2 = 8.2, P = 0.004). Importantly, darting does not emerge spontaneously in animals that are exposed to the auditory CS without footshock, suggesting that darting is not simply reflective of hyperactivity or startle to the tone.
Darting as a function of chamber size
Rodents can alter conditioned freezing behavior based on the size of the chamber (Bolles and Collier 1976). Whether darting is also susceptible to such spatial manipulations is not known, and potential sex differences in the propensity to adapt conditioned responding as a function of space have not been investigated. To address these questions, we performed a 2-d experiment in which adult male (n = 20) and female (n = 30) Sprague Dawley rats underwent a seven-CS–US cued fear conditioning session in standard 20-cm × 20-cm chambers (Fig. 4A). Twenty-four hours later, they were placed in a 1-m2 open field arena and exposed to seven CS presentations. In half of each cohort, animals’ movement was restricted by an interior arena with 20-cm × 20-cm dimensions (small field [SF]), while the other half were given free range of the open field (OF) arena.
We first evaluated shock response in all animals on day 1 and found a significant main effect of group (F(2,46) = 13.98, P < 0.0001). Dunnett's multiple comparisons tests revealed that shock response in darters was significantly higher than both males (P < 0.0001) and nondarting females (P = 0.03) (Fig. 4B). Darting across trials and proportion of male and female darters during fear conditioning are shown in Figure 4C. As we have found previously, darting during fear conditioning emerges during later trials and was more prevalent in females compared with males (40% vs. 5%; χ2 = 6.6, P = 0.01). Conditioned freezing on day 1 did not differ in males (day 1: F(1,14) = 0.02, P = 0.87) (Fig. 4D) or females (F(1,22) = 1.8, P = 0.27) (Fig. 4E) based on their day 2 chamber assignment. Group differences in average freezing did not reach significance (Fig. 4F).
On day 2, we did not observe any conditioned darting in SF males or females (data not depicted), consistent with previous observations that in our standard-sized chambers, darting on day 2 is extremely rare (Gruene et al. 2015). In contrast, we observed conditioned darting in OF males and females during early tones (Fig. 4G, left) and, once again, darting was more prevalent in females compared with males (75% vs. 33%, χ2 = 4.9, P = 0.03) (Fig. 4G, right). Finally, we evaluated conditioned freezing on day 2 as a factor of SF/OF assignment within each sex. In males (Fig. 4H), no effect of group was observed (day 2: F(1,14) = 1.3, P = 0.27) (Fig. 4H). In contrast, females exhibited a robust difference in freezing on day 2 (F(1,22) = 36.6, P < 0.0001) (Fig. 4I), with OF females exhibiting less freezing than their SF counterparts. A one-way ANOVA of average freezing across OF groups neared but did not reach significance (F(2,21) = 3.1, P = 0.06) (Fig. 4J).
The results here demonstrate that while both males and females are more likely to exhibit conditioned darting when the space available to them increases, the female-biased nature of darting persists. Furthermore, our freezing data indicate that females are much more likely than males to adapt their conditioned fear behavior according to their environment, an important consideration for future fear conditioning studies in which spatial parameters are manipulated.
Darting as a function of fear conditioning trial number
We reliably observed that darting appears to emerge as CS–US trials progress, often after brief bouts of conditioned freezing, suggesting a switch in conditioned response strategy (see Fig. 1 for example). If this is the case, then the animals that engage in darting during a seven-CS–US session may be “early adopters”—in other words, the first animals to switch—and we may thus observe darting in more animals, including males, if CS–US presentations continue. To answer this question empirically, we performed a 2-d overtraining fear conditioning experiment (20 CS–US presentations, followed by two CS presentations in a new context on day 2) in adult male (n = 19) and female (n = 20) Sprague Dawley rats (Fig. 5A).
When we evaluated the prevalence of darting across fear conditioning trials (Fig. 5B, left), we observed that, as in previous studies, darting in females emerged around CS 5–7. In males, we observed an increase in darting shortly after that, with nearly 30% of males darting during tones 11–12. Overall, 45% of males and 50% of females were classified as darters (Fig. 5B, right), suggesting that sex differences in darting prevalence can be eliminated with extended protocols.
The near 50/50 split in both sexes allowed us to conduct within-sex comparisons of other behaviors in darters versus nondarters. In males, darters exhibited reduced freezing during fear conditioning but not the tone test on day 2 (Fig. 5C). A two-way ANOVA for freezing on day 1 revealed a significant darting × trial interaction (F(9,153) = 2.1, P = 0.04) and a significant main effect of darting (F(1,17) = 26.1, P < 0.0001). Analysis of shock responding (Fig. 5D) also revealed a significant darting × trial interaction (F(9,153) = 6.9, P < 0.0001) and a significant main effect of darting (F(1,17) = 42.0, P < 0.0001), driven by an increase in shock response velocity in darters. Similarly, evaluation of postshock activity (Fig. 5E), defined as the maximum velocity reached in the 30-sec postshock derived epoch (see Fig. 1), revealed a significant darting × trial interaction (F(9,153) = 2.6, P = 0.008) and a significant main effect of darting (F(1,17) = 16.3, P = 0.0009).
Surprisingly, female darters and nondarters did not significantly differ in conditioned freezing during fear conditioning or the tone test (two-way ANOVA effect of darting: F(1,18) = 1.87, P = 0.19) (Fig. 5F). However, analysis of shock responding (Fig. 5G) revealed a significant darting × trial interaction (F(9,162) = 2.6, P = 0.007) and a significant main effect of darting (F(1,18) = 10.8, P = 0.004). As in males, this effect was driven by a progressive increase in female darters’ shock response velocity. We observed a similar pattern in analysis of postshock activity (Fig. 5H), finding a significant darting × trial interaction (F(9,162) = 2.3, P = 0.02) and a significant main effect of darting (F(1,18) = 12.0, P = 0.003). Interestingly, the significant effect of darting in both male and female postshock responding appears to be primarily driven by a rapid drop in postshock activity exhibited by nondarters after the first two shocks, while darters maintain or increase their activity levels.
We conclude from these analyses that with an extended or “overtraining” fear conditioning session, similar proportions of males and females will engage in conditioned darting. These findings support the idea that darting reflects a switch in conditioned fear behavior. Moreover, darting in both sexes is associated with an increase in shock response and postshock locomotor activity, suggesting that individual differences in shock sensitivity may be an important predictor of an animal's propensity to dart.
Darting as a function of shock intensity
Our previous and current results suggest that darting may arise in animals that exhibit an amplified and protracted behavioral response to the shock. To investigate the role that shock intensity might play in modulating the prevalence of darting, we performed a 2-d auditory cued fear conditioning experiment in which animals (total males: n = 24; total females: n = 23) were exposed to seven presentations of our standard 30-sec CS, which coterminated with either a 0.3- or 1.0-mA footshock (Fig. 6A). A two-CS tone test was performed in a new context the following day.
Analysis of average shock response in all animals revealed main effects of both sex and shock intensity (sex: F(1,44) = 15.98, P = 0.0002; shock: F(1,44) = 15.98, P < 0.0001) (Fig. 6B). Sidak's adjusted post-hoc tests confirmed that both males and females exhibited greater shock responses to the 1.0-mA shock compared with the 0.3-mA shock (P < 0.0001 both comparisons) and that females exhibited more robust shock responses than males at both shock intensities (P < 0.05 both comparisons). We also performed a one-way ANOVA of shock response in the 0.3-mA groups separated by darting and found, as previously, that darters’ shock response was significantly higher than males’ (F(2,21) = 9.3, P = 0.001; Dunnett's post-hoc P = 0.0008) (Fig. 6C). Nondarters did not differ from males (P = 0.07), suggesting that the main sex difference was driven at least in part by darters. We did not perform this analysis in the 1.0-mA condition due to the very low number of darters (Fig. 6E).
Darting prevalence in males and females across trials and overall can be seen in Figure 6, D and E, respectively. No males reached criterion for conditioned darting in either shock condition. In females, darting emerged during later trials, as previously observed. Five females in the 0.3-mA group and one female in the 1.0-mA group reached criterion for darting. Although this would suggest that darting is more likely to occur at lower shock intensities, this difference did not reach statistical significance, possibly due to low power (χ2 = 3.2, P = 0.08).
Males showed higher levels of CS-elicited freezing when the US was 1.0 mA compared with 0.3 mA (main effect of intensity: F(1,22) = 7.4, P = 0.01) (Fig. 6F, left). This discrimination was also evident in CS-elicited freezing on day 2 (Mann–Whitney U = 16; P = 0.0007) (Fig. 5F, right). In females (Fig. 6G), animals in the 1.0-mA group also exhibited higher levels of CS-elicited freezing compared with 0.3 mA on both days (day 1, effect of shock: F(1,22) = 8.4, P = 0.008; day 2, unpaired t-test = 3.4, P = 0.002).
Together, these data tell an intriguing and somewhat paradoxical story about the interactions between shock intensity, shock response, conditioned freezing, and the propensity to engage darting behavior. We found that shock response is a reliable measure to demonstrate discrimination between shocks of different intensities in both sexes, and that shock response in darters is higher than nondarting males. However, we also found that CS-elicited darting may be more likely to be observed when shock intensities are lower. We discuss the potential implications of these data below and look forward to investigating the mechanistic basis of these surprising findings in future work.
Discussion
The purpose of these experiments was to identify situational modulators and behavioral correlates of conditioned darting in male and female rats during Pavlovian fear conditioning. Manipulations of context, trial number, and shock intensity revealed that, like freezing, darting as a conditioned response is indeed sensitive to these experimental parameters; more space or CS–US trials led to an increase in the number of darters, while increasing shock intensity decreased the number of darters. ScaredyRat analysis also demonstrated that darters of both sexes reliably show higher shock responses and protracted postshock activity than nondarters, suggesting that the propensity of an individual animal to engage in darting as a conditioned response is related to the magnitude of its unconditioned responses. Intriguingly, these phenotypic splits in shock reactivity are not evident in the very first trials, suggesting that the initial CS and US experiences may trigger these divergent trajectories. We look forward to more thoroughly investigating the mechanisms that connect pain sensitivity and conditioned responses in the future.
Our findings build on decades of seminal single-sex work that defined how experimental parameters affect conditioned freezing, but we also make significant advances in several notable ways. First, ScaredyRat allowed us to examine not only freezing but also multiple conditioned and unconditioned fear behaviors across different experimental preparations. While freezing is a well-established and dependable conditioned fear response, the field's current reliance on it as the sole indicator of conditioned fear in rodents has given us an incomplete picture. For decades, any nonfreezing behavior exhibited during classical fear conditioning has been excluded from analyses as not fear-related or not representative of learning. We see here that at least one of those behaviors, darting, is representative of learning and is a conditioned response that is affected by similar situational modulators that affect freezing.
Evidence that darting is a true conditioned response comes from several points: First, we replicated our prior findings (Gruene et al. 2015; Colom-Lapetina et al. 2019) that darting in a cued conditioning experiment follows an upward trajectory as the session progresses (like freezing), occurs only in response to the CS, and does not reflect a general increase in locomotor activity (Fig. 3A). In addition, we showed that darting does not occur in response to the CS when the CS does not cooccur with a US (Fig. 3C), demonstrating that it is not an innate response to the CS. We also note that within a CS, darting occurs on average 7–10 sec after CS onset (Supplemental Fig. S1B), suggesting that darting does not reflect a CS-elicited startle response. In our US-only experiment, darting follows an upward trajectory as the session progresses, as is typically observed of freezing in context conditioning studies (Russo and Parsons 2021), once again supporting the idea that darting is a conditioned response. Further evidence comes from other laboratories, who have reported conditioned darting in several rodent strains, suggesting that it may be a conserved response. In addition to recent reports of conditioned darting in female Sprague Dawley rats (Morena et al. 2021), female Long Evans rats in a cue discrimination paradigm (for reward, safety, and threat) selectively elicit darting to the threat-paired cue, a behavior that emerges in later trials. Similar to our findings, these animals also show a stronger motor response to the shock itself (Greiner et al. 2019). Furthermore, Long Evans rats (Totty et al. 2021), and both FVBB6 F1 hybrid and C57BL/6J mice (Fadok et al. 2017; Borkar et al. 2020; Hersman et al. 2020) display darting-like active flight behaviors in response to conditioning with a serial compound stimulus, a behavior that is amenable to extinction training. Reports in which darting is not observed (Tryon et al. 2021) may be explained by brevity of conditioning (three CS–US pairings), and the intensity of the US (1 mA). As we report here, darting typically emerges on or after the fifth tone presentation and occurs less frequently in animals receiving 1-mA shocks compared with milder ones.
Some of the more thought-provoking aspects of our work arise when trying to reconcile the relationship between darting and shock reactivity. In experiment 3, darters of both sexes had a higher maximum shock response velocity than nondarters, suggesting that there may be a difference in pain sensitivity between darters and nondarters. We might then expect to observe more darting at higher shock intensities, which also elicit higher shock responses. However, experiment 4 showed that when shock intensity increased, rats were less likely to dart, despite clear evidence that the shock was perceived as more intense. The perceptual–defensive–recuperative model of pain proposed by Bolles and Fanselow (1980) states that when fearful and painful stimuli are both present, fear will “win out” over pain, leading to an opioid-mediated analgesic effect that allows the animal to respond to the fear-inducing stimulus (e.g., freeze). In this context, one possible explanation of our data is that darting indicates that conditioned analgesia has failed to occur. Supporting this hypothesis is evidence from experiment 3, in which we found that shock responding in nondarters stayed relatively flat, while progressively escalating in darters. Given known sex differences in pain processing and opioid signaling (Loyd et al. 2008; Fullerton et al. 2018; Mogil 2020), we feel that future investigations into the neural circuits that might drive this possibility are likely to be fruitful. In particular, the periaqueductal gray (PAG) is a center for both pain and defensive responding in rodents (de Oca et al. 1998; Vianna et al. 2001; Vanegas and Schaible 2004) and is an attractive target for mechanistic inquiry.
This work advances and expands on decades of research on conditioned fear, the vast majority of which has been conducted only in males and only reports freezing behavior. Although landmark studies from the 1970s and 1980s were more likely to include evaluation of both freezing and shock-related activity metrics (e.g., activity bursts or circa-strike behavior) (for review, see Fanselow 1994), this practice has fallen out of fashion in more recent years, we believe to the detriment of the field of behavioral neuroscience. Side-by-side assessment of conditioned fear in both females and males is still woefully rare (Lebron-Milad and Milad 2012), and we believe that the inclusion of both sexes in conditioned fear inquiries will be critical to capturing the range of conditioned behaviors that may be exhibited, not simply those that are dominant in one sex (Shansky and Woolley 2016; Shansky 2019). Our work provides not only novel insight into the facets of the paradigm in which the sexes do and do not differ but also a novel tool with which to collect data for multiple behavioral outcomes. We hope that as others move to include both sexes in their experimental designs, they will take advantage of ScaredyRat to analyze and identify individual differences in both unconditioned and conditioned fear responses.
Materials and Methods
Subjects
All experiments were conducted in young adult (8–10 wk) male (n = 95) and female (n = 105) Sprague Dawley rats (Charles River), weighing 325–350 g and 225–250 g, respectively. See Table 1 for group numbers. Animals were same-sex pair-housed in the Nightingale Hall Animal Facility at Northeastern University in a 12:12 light:dark cycle with access to food and water ad libitum, and were allowed to acclimate to the facilities undisturbed for at least 1 wk prior to testing. Male and female animals were housed in the same room. Animals were briefly acclimated to handling for 2 d prior to testing. Testing was conducted in the light phase between 10 a.m. and 4 p.m. in behavior rooms located within 50 ft of the vivarium, so transport was minimal. All experimenters were female. The estrous cycle was not monitored, as we have previously reported that the propensity to dart is not related to the cycle phase (Gruene et al. 2015). We note therefore that concerns that daily swabbing could induce darting behavior are irrelevant here. All procedures were conducted in accordance with the National Institutes of Health Guide for the Care and Use of Laboratory Animals and were approved by the Northeastern University Institutional Animal Care and Use Committee.
Table 1.
Behavioral apparatus and fixed experimental parameters
Fear conditioning training (FC) and recall tone testing (except in experiment 2) were conducted as described in Gruene et al. (2015), in one of eight identical 20-cm2 chambers constructed of aluminum and Plexiglass walls (rat test cage; Coulbourn Instruments) with metal stainless steel rod flooring attached to a shock generator (Coulbourn Instruments model H13-15). Each chamber was enclosed within a sound isolation cubicle (Coulbourn Instruments model H10-24A). An overhead, infrared digital camera allowed videotaping (30 frames per second) during behavioral procedures. Chamber grid floors, trays, walls, and ceilings were thoroughly cleaned with water and 70% ethanol and dried between sessions. Chambers were used for both males and females, but test sessions were restricted to a single sex.
For context A, chambers were lit with a single house light. Context B testing was done in the same chambers, but the house light was off and a cue light was illuminated. In addition, Plexiglass panels covered the metal grid floor, and a light peppermint scent (Dr. Bronner's) was applied to a removable tray under the chamber floor. Across experiments, animals were allowed 5 min to explore the chamber before CS or US presentation commenced. Mean intertrial interval for all experiments was 3 min with a range of 1.5–5 min. In all cued fear conditioning experiments, the CS was a 30-sec, 4-kHz, 80-dB SPL sine wave tone, which coterminated with a 0.5-sec footshock. The number of CS presentations and footshock intensity varied for each individual experiment and are noted in Table 1.
Open field arena
For experiment 2, day 2 testing occurred in a 1-m2 wooden open field arena with 30-cm-high walls, painted with matte black spray paint. For the small field condition, a 30-cm2 wooden box with open top and bottom (also painted with matte black spray paint) was placed inside the open field (see Fig. 3A). The CS was generated with Garage Band software (Apple) and played at an ITI mimicking those in the standard chambers. Behavior was recorded with a Microsoft Kinect camera.
Behavior tracking and data processing
We used Ethovision software (Noldus) to generate raw velocity data sheets from all video files at a sample rate of 15 frames per second (i.e., every other frame). These files were then fed to ScaredyRat, which extracted freezing, darting, and velocity data for each animal during defined epochs and derived epochs as conveyed in the Results.
ScaredyRat settings and definitions
The time bin duration was set at 1 sec. This is the minimum unit of time for which ScaredyRat analyzes velocity data. Each time bin is represented as one line in the individual plots ScaredyRat generates (e.g., Fig. 1B).
The threshold for freezing for all experiments was set at <0.1 cm/sec (average speed within a time bin).
The threshold for darting for all experiments was set at >20 cm/sec.
Baseline (BL) measures reflect the first 2 min of all sessions. No CS presentations occurred during this time.
Shock response is defined as the maximum velocity reached within a 5-sec derived epoch that begins with the shock presentation.
Postshock activity is defined as the maximum velocity reached within a 30-sec derived epoch that begins immediately after each shock epoch.
Behavioral definitions
Freezing was defined as in Fanselow (1980); specifically, the cessation of all movement except for breathing. ScaredyRat does not count freezing bouts <1 sec.
Darting was defined as in Gruene et al. (2015); specifically, darts are isolated, discrete locomotor events that reach >20 cm/sec and that do not fall within the immediate shock response epoch. This threshold was determined based on initial human observation of darting; that is, when hand-scored videos were processed by Ethovision, locomotor events that were scored as darting by at least two experimenters were all >20 cm/sec. We distinguish darting from shock response, as we believe the shock response to be a reflexive indicator of pain and not a conditioned response.
Darters were defined as in Gruene et al. (2015); specifically, any animal that exhibits one or more darts during at least one CS presentation, excluding CS 1–2. We set this inclusive threshold because in our experience, a single dart is sufficient to identify animals that exhibit behaviors that we have observed previously associated with darting, including enhanced shock response. Answers to common questions about darters are in Supplemental Figure S1. As we have previously reported, darters do not differ in weight compared with same-sex nondarters (unpaired t-tests, females P = 0.72; males P = 0.11) (Supplemental Fig. S1A). Examination of dart timing within a CS (in other words, how soon after the CS onset darting occurs) is shown in Supplemental Figure S1B (data from overtraining experiment). The average number of trials during which darters exhibited darting in each experiment is shown in Supplemental Figure S1C.
Statistical analysis
All statistical analyses were done with Graphpad Prism software. Data sets with multiple time points (e.g., fear conditioning data) were analyzed with two-way repeated measure ANOVAs, followed by Sidak's post-hoc tests adjusted for multiple comparisons when appropriate. One-way ANOVAs were followed by Sidak's or Dunnett's post-hoc tests when appropriate. Group differences in data sets with a single time point (e.g., day 2 average freezing) were assessed with either unpaired t-tests or Mann–Whitney tests if groups were determined to have unequal variances. See Supplemental Table S1 for full statistical results.
Supplementary Material
Acknowledgments
This work was supported by a Fay/Frank Seed grant from the Brain Research Foundation and National Institute of Mental Health grant R01 MH123803 to R.M.S. We thank Jesse Schomer and Sandeep “Bob” Datta for providing equipment used in the open field experiment, and Vasvi Bhutani for technical assistance with the shock intensity experiment.
Author contributions: J.R.M., R.M.S., and S.W. designed the experiments. A.J.L., S.G.T., and K.A.H. developed ScaredyRat. J.R.M., S.W., E.G., and M.F. ran the experiments. J.R.M. and R.M.S. analyzed the data. J.R.M., M.A.L., and R.M.S. wrote the manuscript.
Footnotes
[Supplemental material is available for this article.]
Article is online at http://www.learnmem.org/cgi/doi/10.1101/lm.053587.122.
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