The title compound is more planar than its 3-nitro isomer in the solid state and differs in its hydrogen-bonding pattern.
Keywords: crystal structure, hydrogen bonding
Abstract
The title compound, C8H8N2O4, differs in its degree of planarity from the 3-nitro isomer and also in its hydrogen-bonding pattern. Its NH group forms an intramolecular hydrogen bond to a nitro oxygen atom, and its OH group forms an intermolecular hydrogen bond to an amide oxygen atom, generating [10
] chains in the crystal.
Structure description
The putative free-radical products of the peroxynitrite anion (PN)—CO2 reaction (.NO2 and CO3 .–) have long been thought to constitute an important source of non-CYP450-mediated oxidative biotransformation of N-(4-hydroxyphenyl)acetamide (4-HPA; acetaminophen or paracetamol) and other xenobiotics (Babu et al., 2012 ▸; Dou et al., 2017 ▸; Gernapudi et al., 2009 ▸; Rangan et al., 2006 ▸; Uppu et al., 2005 ▸). In reactions of 4-HPA/PN/CO2, we find that N-(4-hydroxy-3-nitrophenyl)acetamide is one of the major products formed along with N,N′-(6,6′-dihydroxy[1,1′-biphenyl]-3,3′-diyl)bisacetamide (dimer of 4-HPA) and a metastable N-acetyl-1,4-benzoquinone (NBQI; demonstrated through its binding to N-acetyl-l-cysteine; Uppu & Martin, 2005 ▸; Deere et al., 2022 ▸). It was shown that NBQI can react with electrophiles such as the nitrite ion and form yet another nitro product, N-(4-hydroxy-2-nitrophenyl)acetamide (Matsuno et al., 1989 ▸). Although we did not find evidence for the formation of this 2-nitro isomer in 4-HPA/PN/CO2 reactions, we believe that this isomer along with other oxidation products of 4-HPA may play a role in the pharmacology and toxicology of 4-HPA (4-HPA overdose, either unintentional or intentional, is the most common cause of hepatic failure in the USA and elsewhere).
Towards a better understanding of this chemistry, we have synthesized N-(4-hydroxy-2-nitrophenyl)acetamide and N-(4-hydroxy-3-nitrophenyl)acetamide and determined their single-crystal structures. Interestingly, the 2-nitro and 3-nitro isomers have significantly different degrees of molecular planarity in the solid-state and also differ in their hydrogen bonding patterns.
In N-(4-hydroxy-2-nitrophenyl)acetamide, Fig. 1 ▸, the molecule is nearly planar, with an r.m.s. deviation of 0.035 Å for the non-hydrogen atoms. The acetamido group has the largest deviation, with a 5.1 (2)° twist about its central C7—N2 bond. The N—H group forms an intramolecular hydrogen bond (Table 1 ▸) to O3 (part of the nitro group) having an N⋯O distance of 2.6363 (15) Å and N—H⋯O angle of 139.6 (15)°. The hydroxy group forms an intermolecular hydrogen bond to acetamido atom O4 with O⋯O = 2.7183 (14) Å and O—H⋯O = 172.0 (18)°, thereby forming chains propagating in the [10
] direction (Figs. 2 ▸ and 3 ▸).
Figure 1.

The molecular structure of the title molecule with 50% displacement ellipsoids.
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O1—H1O⋯O4i | 0.84 (2) | 1.88 (2) | 2.7183 (14) | 172.0 (18) |
| N2—H2N⋯O3 | 0.883 (19) | 1.901 (17) | 2.6363 (15) | 139.6 (15) |
Symmetry code: (i)
.
Figure 2.
The hydrogen-bonded chain.
Figure 3.
The unit cell of the title compound.
The crystal structure of N-(4-hydroxy-3-nitrophenyl)acetamide has been reported (Salahifar et al., 2015 ▸; Deere et al., 2019 ▸). It is significantly less planar than the title compound, with the acetamido group twisted out of the plane of the phenyl group by 9.0 (2)° and the nitro group twisted out of the phenyl plane by 11.8 (2)°. Its hydrogen-bonding pattern also differs, with the N—H group forming an intermolecular hydrogen bond to the acetamido O atom [N⋯O = 2.9079 (17) Å; N—H⋯O = 176.6 (19)°]. Its OH group forms a bifurcated O—H⋯(O,O) hydrogen bond, with intramolecular component to the adjacent nitro group [O⋯O = 2.6093 (17) Å] and a longer intermolecular component to a nitro oxygen atom of an adjacent molecule [O⋯O = 3.1421 (17) Å; Deere et al., 2019 ▸].
Synthesis and crystallization
The title compound was synthesized by the acetylation of 4-hydroxy-2-nitroaniline using acetic anhydride as described by Naik et al. (2004 ▸) with some minor modification (Fig. 4 ▸). Briefly, 4-hydroxy-2-nitroaniline (3.08 g; 20 mmol) in its hydrochloride form (prepared by addition of a slight molar excess of HCl; 26 mmol) was dissolved in 125 ml of acetonitrile/water (1/4, v/v). The solution was cooled in an ice bath, followed by addition of acetic anhydride (2.43 ml; 24 mmol). Then, sodium bicarbonate (3.36–5.04 g; 40–60 mmol) was added to the mixture with the contents being constantly stirred. Care was taken to maintain that the pH of the final reaction mixture was between 5.5 and 6.5. The yellow precipitate of N-(4-hydroxy-2-nitrophenyl)acetamide was separated by filtration and purified by recrystallization twice from aqueous solution. Single crystals were grown from methanol solution.
Figure 4.
Schematic representation of the synthesis of the title compound.
Refinement
Crystal data, data collection and structure refinement details are summarized in Table 2 ▸.
Table 2. Experimental details.
| Crystal data | |
| Chemical formula | C8H8N2O4 |
| M r | 196.16 |
| Crystal system, space group | Monoclinic, C2/c |
| Temperature (K) | 90 |
| a, b, c (Å) | 9.6643 (3), 18.5534 (5), 9.3072 (2) |
| β (°) | 95.5075 (14) |
| V (Å3) | 1661.13 (8) |
| Z | 8 |
| Radiation type | Cu Kα |
| μ (mm−1) | 1.10 |
| Crystal size (mm) | 0.21 × 0.07 × 0.02 |
| Data collection | |
| Diffractometer | Bruker Kappa APEXII DUO CCD |
| Absorption correction | Multi-scan (SADABS; Krause et al., 2015 ▸) |
| T min, T max | 0.872, 0.978 |
| No. of measured, independent and observed [I > 2σ(I)] reflections | 6856, 1543, 1486 |
| R int | 0.028 |
| (sin θ/λ)max (Å−1) | 0.607 |
| Refinement | |
| R[F 2 > 2σ(F 2)], wR(F 2), S | 0.035, 0.095, 1.13 |
| No. of reflections | 1543 |
| No. of parameters | 134 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.29, −0.24 |
Supplementary Material
Crystal structure: contains datablock(s) I. DOI: 10.1107/S2414314622002012/hb4400sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2414314622002012/hb4400Isup3.hkl
Supporting information file. DOI: 10.1107/S2414314622002012/hb4400Isup3.cml
CCDC reference: 2153454
Additional supporting information: crystallographic information; 3D view; checkCIF report
full crystallographic data
Crystal data
| C8H8N2O4 | F(000) = 816 |
| Mr = 196.16 | Dx = 1.569 Mg m−3 |
| Monoclinic, C2/c | Cu Kα radiation, λ = 1.54184 Å |
| a = 9.6643 (3) Å | Cell parameters from 5235 reflections |
| b = 18.5534 (5) Å | θ = 4.8–69.3° |
| c = 9.3072 (2) Å | µ = 1.10 mm−1 |
| β = 95.5075 (14)° | T = 90 K |
| V = 1661.13 (8) Å3 | Lath, yellow |
| Z = 8 | 0.21 × 0.07 × 0.02 mm |
Data collection
| Bruker Kappa APEXII DUO CCD diffractometer | 1543 independent reflections |
| Radiation source: IµS microfocus | 1486 reflections with I > 2σ(I) |
| QUAZAR multilayer optics monochromator | Rint = 0.028 |
| φ and ω scans | θmax = 69.3°, θmin = 4.8° |
| Absorption correction: multi-scan (SADABS; Krause et al., 2015) | h = −11→7 |
| Tmin = 0.872, Tmax = 0.978 | k = −22→20 |
| 6856 measured reflections | l = −11→10 |
Refinement
| Refinement on F2 | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: mixed |
| R[F2 > 2σ(F2)] = 0.035 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.095 | w = 1/[σ2(Fo2) + (0.0487P)2 + 1.5639P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.13 | (Δ/σ)max < 0.001 |
| 1543 reflections | Δρmax = 0.29 e Å−3 |
| 134 parameters | Δρmin = −0.23 e Å−3 |
Special details
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. All H atoms were located in difference maps and those on C were thereafter treated as riding in geometrically idealized positions with C—H distances 0.95 Å for phenyl and 0.98 Å for methyl. The coordinates of the N—H and O—H hydrogen atoms were refined. Uiso(H) values were assigned as 1.2Ueq for the attached atom (1.5 for OH and methyl). |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| O1 | 0.49965 (11) | 0.11112 (5) | 0.49610 (11) | 0.0180 (2) | |
| H1O | 0.435 (2) | 0.1126 (10) | 0.551 (2) | 0.027* | |
| O2 | 0.36347 (11) | 0.35035 (5) | 0.64809 (11) | 0.0240 (3) | |
| O3 | 0.47807 (11) | 0.43019 (5) | 0.53985 (12) | 0.0239 (3) | |
| O4 | 0.79942 (10) | 0.37109 (5) | 0.17917 (10) | 0.0208 (3) | |
| N1 | 0.44852 (12) | 0.36642 (6) | 0.56392 (12) | 0.0163 (3) | |
| N2 | 0.65588 (12) | 0.39184 (6) | 0.35604 (12) | 0.0149 (3) | |
| H2N | 0.6134 (17) | 0.4246 (10) | 0.4050 (18) | 0.018* | |
| C1 | 0.53400 (14) | 0.18008 (7) | 0.46502 (14) | 0.0143 (3) | |
| C2 | 0.47727 (13) | 0.23927 (7) | 0.52723 (13) | 0.0146 (3) | |
| H2 | 0.4113 | 0.2327 | 0.5955 | 0.018* | |
| C3 | 0.51647 (13) | 0.30877 (7) | 0.49012 (13) | 0.0138 (3) | |
| C4 | 0.61410 (13) | 0.32179 (7) | 0.39015 (13) | 0.0137 (3) | |
| C5 | 0.66952 (13) | 0.26010 (7) | 0.32904 (13) | 0.0140 (3) | |
| H5 | 0.7356 | 0.2659 | 0.2606 | 0.017* | |
| C6 | 0.63082 (13) | 0.19119 (7) | 0.36548 (13) | 0.0143 (3) | |
| H6 | 0.6708 | 0.1509 | 0.3220 | 0.017* | |
| C7 | 0.74622 (13) | 0.41291 (7) | 0.25993 (14) | 0.0152 (3) | |
| C8 | 0.77664 (15) | 0.49227 (7) | 0.26014 (16) | 0.0211 (3) | |
| H8A | 0.8474 | 0.5036 | 0.3395 | 0.032* | |
| H8B | 0.6914 | 0.5192 | 0.2729 | 0.032* | |
| H8C | 0.8109 | 0.5058 | 0.1681 | 0.032* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.0214 (5) | 0.0120 (5) | 0.0220 (5) | −0.0007 (4) | 0.0096 (4) | 0.0002 (4) |
| O2 | 0.0279 (6) | 0.0189 (5) | 0.0287 (6) | 0.0003 (4) | 0.0202 (4) | 0.0005 (4) |
| O3 | 0.0298 (6) | 0.0121 (5) | 0.0327 (6) | −0.0014 (4) | 0.0180 (5) | −0.0002 (4) |
| O4 | 0.0256 (5) | 0.0158 (5) | 0.0234 (5) | 0.0000 (4) | 0.0141 (4) | −0.0013 (4) |
| N1 | 0.0175 (6) | 0.0143 (6) | 0.0182 (6) | 0.0003 (4) | 0.0073 (4) | −0.0003 (4) |
| N2 | 0.0148 (6) | 0.0129 (5) | 0.0179 (6) | 0.0009 (4) | 0.0061 (4) | −0.0006 (4) |
| C1 | 0.0142 (6) | 0.0132 (6) | 0.0155 (6) | −0.0010 (5) | 0.0005 (5) | 0.0010 (5) |
| C2 | 0.0143 (6) | 0.0159 (7) | 0.0143 (6) | −0.0002 (5) | 0.0041 (5) | 0.0001 (5) |
| C3 | 0.0140 (6) | 0.0141 (7) | 0.0136 (6) | 0.0017 (5) | 0.0026 (5) | −0.0019 (5) |
| C4 | 0.0124 (6) | 0.0153 (6) | 0.0133 (6) | −0.0002 (5) | 0.0004 (5) | 0.0004 (5) |
| C5 | 0.0122 (6) | 0.0165 (7) | 0.0138 (6) | 0.0003 (5) | 0.0031 (5) | −0.0003 (5) |
| C6 | 0.0134 (6) | 0.0152 (6) | 0.0145 (6) | 0.0016 (5) | 0.0025 (5) | −0.0013 (5) |
| C7 | 0.0142 (6) | 0.0143 (6) | 0.0173 (6) | 0.0006 (5) | 0.0028 (5) | 0.0010 (5) |
| C8 | 0.0245 (7) | 0.0142 (7) | 0.0266 (7) | −0.0006 (5) | 0.0125 (6) | −0.0002 (5) |
Geometric parameters (Å, º)
| O1—C1 | 1.3599 (16) | C2—C3 | 1.3966 (18) |
| O1—H1O | 0.84 (2) | C2—H2 | 0.9500 |
| O2—N1 | 1.2255 (15) | C3—C4 | 1.4081 (18) |
| O3—N1 | 1.2424 (15) | C4—C5 | 1.4067 (18) |
| O4—C7 | 1.2270 (17) | C5—C6 | 1.3835 (18) |
| N1—C3 | 1.4608 (17) | C5—H5 | 0.9500 |
| N2—C7 | 1.3657 (18) | C6—H6 | 0.9500 |
| N2—C4 | 1.4063 (17) | C7—C8 | 1.5014 (18) |
| N2—H2N | 0.883 (19) | C8—H8A | 0.9800 |
| C1—C2 | 1.3795 (18) | C8—H8B | 0.9800 |
| C1—C6 | 1.3938 (19) | C8—H8C | 0.9800 |
| C1—O1—H1O | 108.0 (12) | N2—C4—C3 | 122.20 (12) |
| O2—N1—O3 | 121.80 (11) | C5—C4—C3 | 115.65 (12) |
| O2—N1—C3 | 118.79 (11) | C6—C5—C4 | 122.03 (12) |
| O3—N1—C3 | 119.41 (11) | C6—C5—H5 | 119.0 |
| C7—N2—C4 | 128.89 (12) | C4—C5—H5 | 119.0 |
| C7—N2—H2N | 119.9 (11) | C5—C6—C1 | 120.94 (12) |
| C4—N2—H2N | 111.2 (11) | C5—C6—H6 | 119.5 |
| O1—C1—C2 | 123.01 (12) | C1—C6—H6 | 119.5 |
| O1—C1—C6 | 118.27 (12) | O4—C7—N2 | 123.52 (12) |
| C2—C1—C6 | 118.72 (12) | O4—C7—C8 | 121.83 (12) |
| C1—C2—C3 | 120.20 (12) | N2—C7—C8 | 114.66 (11) |
| C1—C2—H2 | 119.9 | C7—C8—H8A | 109.5 |
| C3—C2—H2 | 119.9 | C7—C8—H8B | 109.5 |
| C2—C3—C4 | 122.46 (12) | H8A—C8—H8B | 109.5 |
| C2—C3—N1 | 114.51 (11) | C7—C8—H8C | 109.5 |
| C4—C3—N1 | 123.02 (12) | H8A—C8—H8C | 109.5 |
| N2—C4—C5 | 122.14 (12) | H8B—C8—H8C | 109.5 |
| O1—C1—C2—C3 | −179.68 (11) | N1—C3—C4—N2 | 1.39 (19) |
| C6—C1—C2—C3 | 0.19 (19) | C2—C3—C4—C5 | 0.31 (18) |
| C1—C2—C3—C4 | −0.29 (19) | N1—C3—C4—C5 | 180.00 (11) |
| C1—C2—C3—N1 | 180.00 (11) | N2—C4—C5—C6 | 178.36 (11) |
| O2—N1—C3—C2 | −1.17 (17) | C3—C4—C5—C6 | −0.25 (18) |
| O3—N1—C3—C2 | 178.91 (11) | C4—C5—C6—C1 | 0.18 (19) |
| O2—N1—C3—C4 | 179.12 (12) | O1—C1—C6—C5 | 179.74 (11) |
| O3—N1—C3—C4 | −0.79 (19) | C2—C1—C6—C5 | −0.13 (19) |
| C7—N2—C4—C5 | 3.1 (2) | C4—N2—C7—O4 | 5.1 (2) |
| C7—N2—C4—C3 | −178.38 (12) | C4—N2—C7—C8 | −174.86 (12) |
| C2—C3—C4—N2 | −178.30 (11) |
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1—H1O···O4i | 0.84 (2) | 1.88 (2) | 2.7183 (14) | 172.0 (18) |
| N2—H2N···O3 | 0.883 (19) | 1.901 (17) | 2.6363 (15) | 139.6 (15) |
Symmetry code: (i) x−1/2, −y+1/2, z+1/2.
Funding Statement
The authors acknowledge the support from the National Institutes of Health (NIH) through the National Institute of General Medical Science (NIGMS) grant No. 5 P2O GM103424–17 and the US Department of Education (US DoE; Title III, HBGI Part B grant No. P031B040030). Its contents are solely the responsibility of authors and do not represent the official views of NIH, NIGMS, or US DoE. The upgrade of the diffractometer was made possible by grant No. LEQSF(2011–12)-ENH-TR-01, administered by the Louisiana Board of Regents.
References
- Babu, S., Vellore, N. A., Kasibotla, A. V., Dwayne, H. J., Stubblefield, M. A. & Uppu, R. M. (2012). Biochem. Biophys. Res. Commun. 426, 215–220. [DOI] [PubMed]
- Bruker (2016). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.
- Deere, C. J., Hines, J. E. III, Agu, O. A. & Fronczek, F. R. (2019). CSD Communication (CCDC 1910293). CCDC, Cambridge, England. https://doi.org/10.5517/ccdc.csd.cc223tcd.
- Deere, C. J., Hines, J. E. III & Uppu, R. M. (2022). Unpublished.
- Dou, X., Li, J. Z., Danelisen, I., Trush, M. A., Misra, H. P., Zhu, H., Jia, Z. & Li, Y. R. (2017). Reactive Oxygen Species 3, 127–134.
- Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854.
- Gernapudi, R., Babu, S., Raghavamenon, A. C. & Uppu, R. M. (2009). FASEB J, 23 (Suppl. 1), 397. https://faseb.onlinelibrary.wiley.com/doi/10.1096/fasebj.23.1_supplement.LB397
- Krause, L., Herbst-Irmer, R., Sheldrick, G. M. & Stalke, D. (2015). J. Appl. Cryst. 48, 3–10. [DOI] [PMC free article] [PubMed]
- Macrae, C. F., Sovago, I., Cottrell, S. J., Galek, P. T. A., McCabe, P., Pidcock, E., Platings, M., Shields, G. P., Stevens, J. S., Towler, M. & Wood, P. A. (2020). J. Appl. Cryst. 53, 226–235. [DOI] [PMC free article] [PubMed]
- Matsuno, T., Matsukawa, T., Sakuma, Y. & Kunieda, T. (1989). Chem. Pharm. Bull. 37, 1422–1423.
- Naik, S., Bhattacharjya, G., Kavala, V. R. & Patel, B. K. (2004). Arkivoc, pp. 55–63.
- Rangan, V., Perumal, T. E., Sathishkumar, K. & Uppu, R. M. (2006). Toxicologist (supplement to Toxicol. Sci.) 90, 242–243. https://www.toxicology.org/pubs/docs/Tox/2006Tox.pdf
- Salahifar, E., Nematollahi, D., Bayat, M., Mahyari, A. & Rudbari, H. A. (2015). Org. Lett. 17, 4666–4669. [DOI] [PubMed]
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Sheldrick, G. M. (2015). Acta Cryst. C71, 3–8.
- Uppu, R. M. & Martin, R. J. (2005). Toxicologist (supplement to Toxicol. Sci.), 319. https://www.toxicology.org/pubs/docs/Tox/2005Tox.pdf
- Uppu, R. M., Sathishkumar, K. & Perumal, T. (2005). Free Radic. Biol. Med. 39 (Suppl. 1) 39, 15. https://www.sciencedirect.com/journal/free-radical-biology-and-medicine/vol/39/suppl/S1
- Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I. DOI: 10.1107/S2414314622002012/hb4400sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2414314622002012/hb4400Isup3.hkl
Supporting information file. DOI: 10.1107/S2414314622002012/hb4400Isup3.cml
CCDC reference: 2153454
Additional supporting information: crystallographic information; 3D view; checkCIF report



