The solid-state structure of dimethyl 4,5-dichlorophthalate is presented. One of the carbonyl-containing ester groups is nearly co-planar with the aromatic ring while the second deviates considerably from the least-squares plane of its chlorine-derivatized aromatic ring. Solid-state integrity is maintained by both electrostatic interactions and C—H⋯O hydrogen bonds.
Keywords: crystal structure, carbonyl, ester, metathesis, catalyst
Abstract
While endeavoring to synthesize new chlorinated ligands for ruthenium-based metathesis catalysts, the title compound dimethyl 4,5-dichlorophthalate, C10H8Cl2O4, was prepared from commercially available 4,5-dichlorophthalic acid in ∼77% yield. The title molecule, which also finds utility as a precursor molecule for the synthesis of drugs used in the treatment of Alzheimer’s disease, shows one carbonyl-containing methyl ester moiety lying nearly co-planar with the chlorine-derivatized aromatic ring while the second methyl ester shows a significant deviation of 101.05 (12)° from the least-squares plane of the aromatic ring. Within the crystal, structural integrity is maintained by the concerted effects of electrostatic interactions involving the electron-deficient carbonyl carbon atom and the electron-rich aromatic ring along the a-axis direction and C—H⋯O hydrogen bonds between neighboring molecules parallel to b.
Structure description
While endeavoring to synthesize new chlorinated ligands for ruthenium-based metathesis catalysts (Anderson et al., 2006 ▸), the title compound, 1, was prepared from commercially available 4,5-dichlorophthalic acid in ∼77% yield. The title molecule also finds utility as a precursor molecule for the synthesis of drugs used in the treatment of Alzheimer’s disease (Hennessy & Buchwald, 2005 ▸).
Compound 1 crystallizes in the centrosymmetric triclinic space group P
with a full molecule of the title compound as the contents of asymmetric unit (Fig. 1 ▸, Table 1 ▸). Within the structure of 1, one of the carbonyl-containing ester groups is nearly co-planar with the aromatic ring demonstrating a deviation of 3.41 (12)° from the least-squares plane of the chlorine-derivatized aromatic ring. The second ester group reveals a much larger deviation from planarity as the dihedral angle involving the second carbonyl group is 101.05 (12)°.
Figure 1.
Anisotropic displacement ellipsoid plot of 1 with ellipsoids set to the 50% probability level.
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| C5—H5⋯O1i | 0.95 | 2.33 | 3.2327 (15) | 159 |
| C10—H10B⋯O3ii | 0.98 | 2.68 | 3.5380 (16) | 147 |
Symmetry codes: (i)
; (ii)
.
Looking down the a-axis, and involving a second molecule of 1 related by inversion, the centroid of the electron-rich, chlorine-derivatized aromatic ring of the first molecule lies above the electron-deficient carbonyl carbon atom of the second at a distance of 3.4600 (12) Å, suggesting the presence of electrostatic interactions (Fig. 2 ▸). In addition to the electrostatic interactions, when looking into the bc-plane, between H5 on the aromatic ring and O1 from the carbonyl that is nearly co-planar with the aromatic ring, a C—H⋯O [d(C5⋯O1) = 3.23 Å; Θ(C5—H5—O1) = 159°] hydrogen bond was observed (Fig. 3 ▸, Table 2 ▸). A one-dimensional array of symmetry-equivalent molecules of 1 linked by C—H⋯O hydrogen bonds results along the b-axis direction when looking into the bc-plane (Fig. 3 ▸). While there are no additional interactions between neighboring, co-planar one-dimensional arrays parallel to one another along c, weak C—H⋯O [d(C10⋯O3) = 3.54 Å; Θ(C10—H10B—O3) = 147°] interactions with a neighboring layer having the symmetry code (1 − x, −y, −z) yielded a centrosymmetric dimer (Fig. 4 ▸, Table 2 ▸) having the
(10) graph-set notation (Bernstein et al., 1995 ▸).
Figure 2.
Solid-state expansion of 1 showing the superposition of the electron-rich aromatic ring centroid and the electron-deficient carbonyl carbon atom. Anisotropic displacement ellipsoids have been set to the 50% probability level.
Figure 3.
Projection of 1 within the bc-plane showing the C—H⋯O hydrogen bonding between neighboring molecules along b to form one-dimensional arrays. Anisotropic displacement ellipsoids have been set to the 50% probability level. Dashed lines represent hydrogen bonds.
Table 2. Experimental details.
| Crystal data | |
| Chemical formula | C10H8Cl2O4 |
| M r | 263.06 |
| Crystal system, space group | Triclinic, P
|
| Temperature (K) | 173 |
| a, b, c (Å) | 7.0204 (6), 7.7661 (6), 10.5392 (8) |
| α, β, γ (°) | 97.733 (1), 109.293 (1), 90.217 (1) |
| V (Å3) | 536.69 (7) |
| Z | 2 |
| Radiation type | Mo Kα |
| μ (mm−1) | 0.60 |
| Crystal size (mm) | 0.35 × 0.29 × 0.28 |
| Data collection | |
| Diffractometer | Bruker APEX CCD area detector |
| Absorption correction | Multi-scan (SADABS; Krause et al., 2015 ▸) |
| T min, T max | 0.838, 0.927 |
| No. of measured, independent and observed [I > 2σ(I)] reflections | 5934, 2582, 2417 |
| R int | 0.031 |
| (sin θ/λ)max (Å−1) | 0.668 |
| Refinement | |
| R[F 2 > 2σ(F 2)], wR(F 2), S | 0.026, 0.073, 1.04 |
| No. of reflections | 2582 |
| No. of parameters | 147 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 0.45, −0.21 |
Figure 4.
Projection of 1 within the ac-plane showing the formation of the
(10) centrosymmetric dimer facilitated by weak C—H⋯O interactions between layers. Anisotropic displacement ellipsoids have been set to the 50% probability level. Dashed lines represent the C—H⋯O interactions.
Synthesis and crystallization
Compound 1 was synthesized by adding 4,5-dichlorophthalic acid (23.68 mmol, 5.566 g) to 70 ml of CH3OH in a 200 ml flask. While stirring, 1.0 ml H2SO4 (98%) was added dropwise and the mixture was allowed to reflux at 70°C overnight. The product was extracted with ethyl acetate, and washed with water, concentrated NaHCO3, 10% NaHCO3, and then a saturated solution of NaCl. After filtering through Na2SO4 to remove trace moisture, the solvent was removed in vacuo to yield a clear oil, which later crystallized into small rods. Recrystallization from the mixed solvents of isopropyl alcohol and dichloromethane produced X-ray quality crystals of 1 up to 2 mm.
Refinement
Crystal data, data collection and structure refinement details for 1 are summarized in Table 2 ▸. The choice of the space group P
for 1 was unambiguously verified by PLATON (Spek, 2003 ▸; Spek, 2020 ▸).
Supplementary Material
Crystal structure: contains datablock(s) I. DOI: 10.1107/S2414314621010439/bv4041sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2414314621010439/bv4041Isup2.hkl
Supporting information file. DOI: 10.1107/S2414314621010439/bv4041Isup3.cml
CCDC reference: 720360
Additional supporting information: crystallographic information; 3D view; checkCIF report
full crystallographic data
Crystal data
| C10H8Cl2O4 | Z = 2 |
| Mr = 263.06 | F(000) = 268 |
| Triclinic, P1 | Dx = 1.628 Mg m−3 |
| a = 7.0204 (6) Å | Mo Kα radiation, λ = 0.71073 Å |
| b = 7.7661 (6) Å | Cell parameters from 548 reflections |
| c = 10.5392 (8) Å | θ = 2.4–27.7° |
| α = 97.733 (1)° | µ = 0.60 mm−1 |
| β = 109.293 (1)° | T = 173 K |
| γ = 90.217 (1)° | Irregular, colorless |
| V = 536.69 (7) Å3 | 0.35 × 0.29 × 0.28 mm |
Data collection
| Bruker APEX CCD area detector diffractometer | 2582 independent reflections |
| Radiation source: Fine-focus sealed tube | 2417 reflections with I > 2σ(I) |
| Graphite monochromator | Rint = 0.031 |
| phi and ω scans | θmax = 28.3°, θmin = 2.1° |
| Absorption correction: multi-scan (SADABS; Krause et al., 2015) | h = −9→9 |
| Tmin = 0.838, Tmax = 0.927 | k = −10→10 |
| 5934 measured reflections | l = −14→14 |
Refinement
| Refinement on F2 | Primary atom site location: dual |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.026 | H-atom parameters constrained |
| wR(F2) = 0.073 | w = 1/[σ2(Fo2) + (0.0368P)2 + 0.1955P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.04 | (Δ/σ)max = 0.001 |
| 2582 reflections | Δρmax = 0.45 e Å−3 |
| 147 parameters | Δρmin = −0.21 e Å−3 |
| 0 restraints |
Special details
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. All non-hydrogen atoms were refined anisotropically. H atoms bound to C atoms were constrained to ride on the atoms onto which they are bonded, where C—H = 0.95 (aromatic) or 0.98 Å (methyl) with Uiso(H) = 1.2Ueq(C). |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| Cl1 | 0.81953 (5) | 0.48342 (4) | 0.83259 (3) | 0.02349 (9) | |
| Cl2 | 0.74478 (5) | 0.08068 (4) | 0.71750 (3) | 0.02487 (9) | |
| O1 | 0.76916 (17) | 0.76700 (12) | 0.40055 (10) | 0.0310 (2) | |
| O2 | 0.69277 (14) | 0.55617 (11) | 0.22210 (9) | 0.02121 (18) | |
| O3 | 0.50933 (14) | 0.17388 (12) | 0.16137 (9) | 0.02470 (19) | |
| O4 | 0.84744 (13) | 0.20884 (11) | 0.21752 (8) | 0.02113 (18) | |
| C1 | 0.73795 (16) | 0.47447 (14) | 0.43804 (11) | 0.0158 (2) | |
| C2 | 0.77075 (17) | 0.53010 (15) | 0.57530 (12) | 0.0170 (2) | |
| H2 | 0.7904 | 0.6508 | 0.6094 | 0.020* | |
| C3 | 0.77483 (17) | 0.41014 (15) | 0.66231 (11) | 0.0172 (2) | |
| C4 | 0.74445 (17) | 0.23318 (15) | 0.61230 (12) | 0.0181 (2) | |
| C5 | 0.71216 (18) | 0.17662 (15) | 0.47593 (12) | 0.0185 (2) | |
| H5 | 0.6921 | 0.0558 | 0.4423 | 0.022* | |
| C6 | 0.70903 (17) | 0.29623 (14) | 0.38820 (11) | 0.0159 (2) | |
| C7 | 0.73570 (17) | 0.61539 (15) | 0.35369 (12) | 0.0179 (2) | |
| C8 | 0.6829 (2) | 0.68909 (17) | 0.13612 (13) | 0.0247 (3) | |
| H8A | 0.6390 | 0.6352 | 0.0408 | 0.037* | |
| H8B | 0.8168 | 0.7473 | 0.1603 | 0.037* | |
| H8C | 0.5863 | 0.7746 | 0.1491 | 0.037* | |
| C9 | 0.67274 (18) | 0.22206 (14) | 0.24202 (12) | 0.0175 (2) | |
| C10 | 0.8297 (2) | 0.14662 (17) | 0.07783 (12) | 0.0249 (3) | |
| H10A | 0.7640 | 0.2330 | 0.0200 | 0.037* | |
| H10B | 0.7485 | 0.0365 | 0.0474 | 0.037* | |
| H10C | 0.9646 | 0.1283 | 0.0717 | 0.037* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Cl1 | 0.02835 (16) | 0.02741 (16) | 0.01490 (15) | −0.00009 (11) | 0.00920 (12) | −0.00131 (11) |
| Cl2 | 0.03392 (18) | 0.02289 (16) | 0.01804 (15) | −0.00098 (12) | 0.00730 (12) | 0.00740 (11) |
| O1 | 0.0505 (6) | 0.0152 (4) | 0.0266 (5) | 0.0004 (4) | 0.0124 (4) | 0.0022 (3) |
| O2 | 0.0281 (4) | 0.0181 (4) | 0.0175 (4) | −0.0002 (3) | 0.0066 (3) | 0.0052 (3) |
| O3 | 0.0253 (5) | 0.0269 (4) | 0.0174 (4) | −0.0058 (3) | 0.0021 (3) | 0.0010 (3) |
| O4 | 0.0235 (4) | 0.0248 (4) | 0.0136 (4) | 0.0029 (3) | 0.0056 (3) | −0.0005 (3) |
| C1 | 0.0142 (5) | 0.0158 (5) | 0.0169 (5) | 0.0010 (4) | 0.0045 (4) | 0.0026 (4) |
| C2 | 0.0152 (5) | 0.0161 (5) | 0.0188 (5) | 0.0008 (4) | 0.0056 (4) | −0.0004 (4) |
| C3 | 0.0156 (5) | 0.0217 (5) | 0.0139 (5) | 0.0011 (4) | 0.0052 (4) | 0.0000 (4) |
| C4 | 0.0183 (5) | 0.0196 (5) | 0.0164 (5) | 0.0003 (4) | 0.0049 (4) | 0.0050 (4) |
| C5 | 0.0216 (5) | 0.0155 (5) | 0.0171 (5) | −0.0003 (4) | 0.0048 (4) | 0.0019 (4) |
| C6 | 0.0155 (5) | 0.0165 (5) | 0.0143 (5) | 0.0002 (4) | 0.0034 (4) | 0.0011 (4) |
| C7 | 0.0168 (5) | 0.0167 (5) | 0.0204 (5) | 0.0019 (4) | 0.0059 (4) | 0.0036 (4) |
| C8 | 0.0292 (6) | 0.0237 (6) | 0.0243 (6) | 0.0038 (5) | 0.0098 (5) | 0.0115 (5) |
| C9 | 0.0242 (6) | 0.0125 (5) | 0.0150 (5) | 0.0009 (4) | 0.0049 (4) | 0.0030 (4) |
| C10 | 0.0342 (7) | 0.0261 (6) | 0.0147 (5) | 0.0029 (5) | 0.0097 (5) | −0.0001 (4) |
Geometric parameters (Å, º)
| Cl1—C3 | 1.7305 (12) | C2—C3 | 1.3865 (16) |
| Cl2—C4 | 1.7272 (12) | C3—C4 | 1.3931 (16) |
| O1—C7 | 1.2042 (15) | C4—C5 | 1.3871 (16) |
| O2—C7 | 1.3330 (15) | C5—H5 | 0.9500 |
| O2—C8 | 1.4500 (14) | C5—C6 | 1.3915 (15) |
| O3—C9 | 1.2022 (15) | C6—C9 | 1.5069 (16) |
| O4—C9 | 1.3359 (15) | C8—H8A | 0.9800 |
| O4—C10 | 1.4503 (14) | C8—H8B | 0.9800 |
| C1—C2 | 1.3940 (16) | C8—H8C | 0.9800 |
| C1—C6 | 1.4018 (15) | C10—H10A | 0.9800 |
| C1—C7 | 1.4969 (15) | C10—H10B | 0.9800 |
| C2—H2 | 0.9500 | C10—H10C | 0.9800 |
| C7—O2—C8 | 115.05 (9) | C5—C6—C9 | 116.26 (10) |
| C9—O4—C10 | 115.31 (10) | O1—C7—O2 | 123.60 (11) |
| C2—C1—C6 | 119.63 (10) | O1—C7—C1 | 123.11 (11) |
| C2—C1—C7 | 115.67 (10) | O2—C7—C1 | 113.29 (9) |
| C6—C1—C7 | 124.70 (10) | O2—C8—H8A | 109.5 |
| C1—C2—H2 | 119.8 | O2—C8—H8B | 109.5 |
| C3—C2—C1 | 120.33 (10) | O2—C8—H8C | 109.5 |
| C3—C2—H2 | 119.8 | H8A—C8—H8B | 109.5 |
| C2—C3—Cl1 | 119.14 (9) | H8A—C8—H8C | 109.5 |
| C2—C3—C4 | 119.92 (10) | H8B—C8—H8C | 109.5 |
| C4—C3—Cl1 | 120.94 (9) | O3—C9—O4 | 125.21 (11) |
| C3—C4—Cl2 | 121.06 (9) | O3—C9—C6 | 124.09 (11) |
| C5—C4—Cl2 | 118.80 (9) | O4—C9—C6 | 110.60 (10) |
| C5—C4—C3 | 120.14 (10) | O4—C10—H10A | 109.5 |
| C4—C5—H5 | 119.9 | O4—C10—H10B | 109.5 |
| C4—C5—C6 | 120.23 (10) | O4—C10—H10C | 109.5 |
| C6—C5—H5 | 119.9 | H10A—C10—H10B | 109.5 |
| C1—C6—C9 | 124.00 (10) | H10A—C10—H10C | 109.5 |
| C5—C6—C1 | 119.74 (10) | H10B—C10—H10C | 109.5 |
| Cl1—C3—C4—Cl2 | 1.42 (14) | C4—C5—C6—C1 | −0.23 (17) |
| Cl1—C3—C4—C5 | −178.93 (9) | C4—C5—C6—C9 | −179.96 (10) |
| Cl2—C4—C5—C6 | 179.38 (9) | C5—C6—C9—O3 | 78.67 (15) |
| C1—C2—C3—Cl1 | 179.08 (9) | C5—C6—C9—O4 | −97.92 (12) |
| C1—C2—C3—C4 | −0.50 (17) | C6—C1—C2—C3 | 0.00 (17) |
| C1—C6—C9—O3 | −101.05 (14) | C6—C1—C7—O1 | −176.90 (12) |
| C1—C6—C9—O4 | 82.36 (13) | C6—C1—C7—O2 | 3.20 (16) |
| C2—C1—C6—C5 | 0.37 (17) | C7—C1—C2—C3 | 179.72 (10) |
| C2—C1—C6—C9 | −179.92 (10) | C7—C1—C6—C5 | −179.33 (10) |
| C2—C1—C7—O1 | 3.39 (17) | C7—C1—C6—C9 | 0.38 (18) |
| C2—C1—C7—O2 | −176.51 (10) | C8—O2—C7—O1 | −1.71 (17) |
| C2—C3—C4—Cl2 | −179.00 (8) | C8—O2—C7—C1 | 178.18 (9) |
| C2—C3—C4—C5 | 0.65 (17) | C10—O4—C9—O3 | 6.33 (17) |
| C3—C4—C5—C6 | −0.28 (18) | C10—O4—C9—C6 | −177.12 (9) |
Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| C5—H5···O1i | 0.95 | 2.33 | 3.2327 (15) | 159 |
| C10—H10B···O3ii | 0.98 | 2.68 | 3.5380 (16) | 147 |
Symmetry codes: (i) x, y−1, z; (ii) −x+1, −y, −z.
Funding Statement
Funding for this research was provided by: Pomona College; Harvey Mudd College.
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I. DOI: 10.1107/S2414314621010439/bv4041sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2414314621010439/bv4041Isup2.hkl
Supporting information file. DOI: 10.1107/S2414314621010439/bv4041Isup3.cml
CCDC reference: 720360
Additional supporting information: crystallographic information; 3D view; checkCIF report




