Skip to main content
Elsevier - PMC Mpox Collection logoLink to Elsevier - PMC Mpox Collection
. 1998 Jan 5;64(2):217–221. doi: 10.1016/S0166-0934(96)02155-6

Gene for A-type inclusion body protein is useful for a polymerase chain reaction assay to differentiate orthopoxviruses

Hermann Meyer a,, Susan L Ropp b, Joseph J Esposito b
PMCID: PMC9528891  PMID: 9079767

Abstract

Orthopoxvirus species were identified and differentiated by polymerase chain reaction amplification of genome DNA using a single primer-pair based on sequences coding for the major protein component of the cowpox virus acidophilic-type inclusion body (ATI). DNA available for 6 of 8 Old World (cowpox, variola, monkeypox, camelpox, ectromelia and vaccinia viruses) and 3 New World (skunkpox, volepox, and raccoonpox) resulted in amplicons that ranged in size from 510 to 1673 base pairs depending on the species, except for raccoonpox virus DNA which did not amplify. XbaI digest gel electrophoresis profiles of the amplicons improved resolution of the differences.

Keywords: Orthopoxvirus, PCR, Differentiation, ATI-gene

References

  1. Esposito J.J., et al. In: Virus Taxonomy, Sixth Report of the International Committee on Taxonomy of Viruses. Murphy F.A., Fauquet C.M., Bishop D.H.L., Ghabrial S.A., Jarvis A.W., Martelli G.P., Mayo M.A., Summers M.D., editors. Springer-Verlag; Berlin: 1995. Poxviridae; pp. 79–91. [Google Scholar]
  2. Esposito J.J., Knight J.C. Orthopoxvirus DNA: Comparison of restriction profiles and maps. Virology. 1985;143:230–251. doi: 10.1016/0042-6822(85)90111-4. [DOI] [PubMed] [Google Scholar]
  3. Esposito J.J., Massung R.F. In: 6th edn. Murray P.R., Tenover F., Baron E.J., Pfaller M.A., Yolken R.H., editors. American Society for Microbiology; Washington D.C: 1995. Poxviruses infecting humans; pp. 1131–1138. (Manual of Clinical Microbiology). [Google Scholar]
  4. Esposito J.J., Nakano J.H. In: Lennette E.H., Halonen P., Murphy F.A., editors. Springer-Verlag; Berlin: 1988. Poxviridae: the poxviruses; pp. 177–207. (Laboratory Diagnosis of Infectious Diseases, Vol. 2. Viral, Rickettsial and Chlamydial Diseases). [Google Scholar]
  5. Fenner F., Wittek R., Dumbell K.R. Academic Press; New York: 1989. The Orthopoxviruses. [Google Scholar]
  6. Knight J.C., Massung R.F., Esposito J.J. In: Diagnosis of Human Viruses by Polymerase Chain Reaction Technology. 2nd edn. Becker Y., Darai G., editors. Springer-Verlag; Berlin: 1995. Polymerase chain reaction identification of smallpox virus; pp. 297–302. [Google Scholar]
  7. Massung R.F., Liu L., Jin Q., Knight J.C., Yuran T.E., Kerlavage A.R., Parson J.M., Venter J.C., Esposito J.J. Analysis of the complete genome of smallpox variola major strain Bangladesh-1975. Virology. 1994;201:215–240. doi: 10.1006/viro.1994.1288. [DOI] [PubMed] [Google Scholar]
  8. Meyer H., Pfeffer M., Rziha H.-J. Sequence alterations within and downstream of the A-type inclusion protein genes allow differentiation of Orthopoxvirus species by polymerase chain reaction. J. Gen. Viral. 1994;75:1975–1981. doi: 10.1099/0022-1317-75-8-1975. [DOI] [PubMed] [Google Scholar]
  9. Meyer H., Ropp S.L., Esposito J.J. In: Methods in Molecular Biology: Diagnostic Virology Protocols. Warnes A., Stephenson J., editors. Humana Press; Totowa, NJ: 1997. Poxvirus diagnostic protocols. in press. [Google Scholar]
  10. Pfeffer M., Meyer H., Wernery U., Kaaden O.-R. Comparison of camelpox viruses isolated in Dubai. Vet. Microbiol. 1996;49:135–146. doi: 10.1016/0378-1135(95)00181-6. [DOI] [PubMed] [Google Scholar]
  11. Ropp S.L., Jin Q., Knight J.C., Massung R.F., Esposito J.J. Polymerase chain reaction strategy for identification and differentiation of smallpox and other orthopoxviruses. J. Clin. Microbiol. 1995;33:2069–2076. doi: 10.1128/jcm.33.8.2069-2076.1995. [DOI] [PMC free article] [PubMed] [Google Scholar]

Articles from Journal of Virological Methods are provided here courtesy of Elsevier

RESOURCES