Abstract
Background:
Cochlear implantation is an effective auditory rehabilitation strategy for those with profound hearing loss, including those with residual low frequency hearing through use of hybrid cochlear implantation techniques. Post-mortem studies demonstrate the nearly ubiquitous presence of intracochlear fibrosis and neo-ossification following cochlear implantation. Current evidence suggests post-implantation intracochlear fibrosis is associated with delayed loss of residual acoustic hearing in hybrid cochlear implant (CI) recipients and may also negatively influence outcomes in traditional CI recipients. This study examined the contributions of surgical trauma, foreign body response and electric stimulation to intracochlear fibrosis and the innate immune response to cochlear implantation and the hierarchy of these contributions.
Methods:
Normal hearing CX3CR1+/GFP mice underwent either round window opening (sham), acute CI insertion or chronic CI insertion with no, low- or high-level electric stimulation. Electric stimulation levels were based on neural response telemetry (NRT), beginning post-operative day 7 for 5 hours per day. Subjects (n=3 per timepoint) were sacrificed at 4 hours, 1,4,7,8,11,14 and 21 days. An unoperated group (n=3) served as controls. Cochleae were harvested at each time-point and prepared for immunohistochemistry with confocal imaging. The images were analyzed to obtain CX3CR1+ macrophage cell number and density in the lateral wall (LW), scala tympani (ST) and Rosenthal’s canal (RC).
Results:
A ST peri-implant cellular infiltrate and fibrosis occurred exclusively in the chronically implanted groups starting on day 7 with a concurrent infiltration of CX3CR1+ macrophages not seen in the other groups. CX3CR1+ macrophage infiltration was seen in the LW and RC in all experimental groups within the first week, being most prominent in the 3 chronically implanted groups during the second and third week.
Conclusions:
The cochlear immune response was most prominent in the presence of chronic cochlear implantation, regardless of electric stimulation level. Further, the development of intracochlear ST fibrosis was dependent on the presence of the indwelling CI foreign body. An innate immune response was evoked by surgical trauma alone (sham and acute CI groups) to a lesser degree. These data suggest that cochlear inflammation and intrascalar fibrosis after cochlear implantation are largely dependent on the presence of a chronic indwelling foreign body and are not critically dependent on electrical stimulation. Also, these data support a role for surgical trauma in inciting the initial innate immune response.
Keywords: cochlear implantation, hearing preservation, cochlear inflammation, cochlear macrophages, foreign body response, electro-acoustic stimulation
1. Introduction
Conventional and hybrid cochlear implantation is an effective treatment for patients with severe and profound hearing loss, including those with preserved low frequency hearing. Advances in cochlear implant (CI) design, surgical technique and programming strategies have improved the hearing performance in CI recipients (Mitchell-Innes et al., 2018; Roche & Hansen, 2015). However, several issues hampering CI efficacy remain, including the development of a post-implantation intracochlear tissue response which may contribute to poorer outcomes in both traditional and hybrid CI recipients (Kamakura & Nadol, 2016; Quesnel et al., 2016; Scheperle et al., 2017). The clinical significance of addressing these issues is increased when considering the anticipated near doubling of the combined conventional and hybrid CI candidate population in the next 40 years for those age 60 years and older (Goman et al., 2018).
Fibrosis and neo-ossification with inflammatory cell infiltration in the human cochlea has been well described in post-implantation cadaveric temporal bone studies, occurring in up to 96% of specimens in some series (Foggia et al., 2019). This heterotopic tissue response is often most robust in the peri-implant region of the scala tympani (ST) forming a ‘fibrous sheath’ around the CI, but is sometimes seen to extend distal to the implant tip and into other scala (Linthicum et al., 2017; Nadol et al., 2014; Seyyedi & Nadol, 2014). A similar pattern of post-implantation cochlear tissue response has been seen in several animal models of cochlear implantation, including guinea pig, cat, mouse and sheep (Clark et al., 1975; Claussen et al., 2019; Kaufmann et al., 2020; O’Leary et al., 2013). Deleterious CI outcomes have been associated with the cochlear tissue response and neo-ossification, including poorer word recognition scores (Kamakura & Nadol, 2016), impedance increases with subsequent poorer battery life and decreased dynamic range (Needham et al., 2020; Wilk et al., 2016) and loss of residual acoustic hearing after cochlear implantation (Quesnel et al., 2016; Scheperle et al., 2017).
A wide variety of inflammatory cells, including lymphocytes, macrophages, and peri-implant foreign body giant cells are consistently seen within the intracochlear tissue response as well as other parts of the cochlea (Nadol et al., 2014; O’Malley et al., 2017). Recent observations from cadaveric temporal bones of previously implanted subjects have demonstrated the presence of macrophages of varying morphologies within the scalae as well as other regions of the cochlea, including Rosenthal’s canal (RC), the osseus spiral lamina and vestibular epithelium (Okayasu et al., 2019, 2020). These observations are limited to the longer post-implantation time-points seen in cadaveric temporal bones, but they demonstrate the presence of a persistent cochlear inflammatory infiltrate following cochlear implantation that may contribute to the formation of the intracochlear tissue response. The initial innate immune and inflammatory response to cochlear implantation is still poorly understood as are the relative contributions of the initial inciting events, including insertional trauma (Ishai et al., 2017; P. M. M. C. Li et al., 2007), autologous tissue packing (Rowe et al., 2016), electric stimulation (Kopelovich, Reiss, et al., 2015; Shepherd et al., 2019a), foreign body response (FBR) to CI materials (O’Leary et al., 2013; O’Malley et al., 2017) and likely other genetic and environmental pre-dispositions (Kopelovich et al., 2014). Understanding of this initial inflammatory response and contributing factors will be important in the development of strategies to mitigate the intracochlear tissue response and improve CI efficacy.
This study utilizes our previously published mouse model of chronic cochlear implantation with electric stimulation in a CX3CR1+/GFP reporter mouse to study the initial innate immune response to cochlear implantation (Claussen et al., 2019). CX3CR1 is the receptor to the chemokine, fractalkine (CX3CL1) and is expressed in monocytes, macrophages, microglia, NK cells and some T cells. (Jung et al., 2000). In the mouse cochlea, CX3CR1+ cells are observed routinely and comprise a population of highly inducible resident cochlear macrophages (Hirose et al., 2005; Sato et al., 2008). Prior studies in CX3CR1+/GFP mice, in which one copy of the CX3CR1 gene is replaced with a GFP reporter gene, have shown cochlear migration of CX3CR1+ macrophages in response to sensory hair cell injury (Hirose et al., 2014). Further, CX3CR1 knockout studies have demonstrated a protective role of CX3CR1+ monocytes and macrophages following cochlear insult (Kaur et al., 2015; Sato et al., 2010).
Our main objective was to observe the initial, innate immune response to cochlear implantation at several timepoints by tracking the accumulation of CX3CR1+ macrophages within the cochlea. Additionally, we evaluated the relative contributions of several factors to the resultant cochlear immune response, including round window opening, insertional trauma, chronic placement of the CI foreign body and varied levels of electric stimulation.
2. Methods
2.1. Animals
This study used both male and female adult 8–12 week old heterozygous CX3CR1+/GFP mice (n=93) on a C57BL/6J background. A subset of subjects were heterozygous for Thy1+/ YFP, in which spiral ganglion neurons express YFP. However, in an effort to maximize utilization of the available CX3CR1+/GFP mice offspring, some subjects with a wildtype Thy1+/+ were used. No homozygous CX3CR1GFP/GFP or Thy1YFP/YFP subjects were used in this study. Genotyping was performed for CX3CR1 and Thy1 using standard PCR of genomic DNA from tail samples (Feng et al., 2000; Jung et al., 2000). Five experimental groups (n=3 per time-point) comprised this study: Sham Surgery, the approach to the round window niche was made, opening the round window but not inserting a CI; Acute Insertion (AI), the round window was opened and a CI briefly placed and removed; Chronic Insertion (ChI), full implantation of a CI without electric stimulation; Low Stimulation (LS), full CI implantation with low level electric stimulation starting on post-operative day 7; High Stimulation (HS), full CI implantation with high level electric stimulation starting on post-operative day 7. Surgery was performed exclusively on left ears through a round window approach with a custom 3 half-banded electrode CI (Cochlear Ltd., AUS), as previously described (Claussen et al., 2019). Mice were observed until sacrifice and cochlear histologic preparation at varying timepoints, including 4, 24 and 96 hours, 7, 11, 14, and 21 days post-operatively (Figure 1 depicts the experimental timeline). The Low and High Stimulation groups were not included at the 4, 24 and 96 hour timepoints as this condition was identical to the chronic insertion group prior to electric stimulation start on day 7. The Sham Surgery and Acute Insertion groups did not include subjects for the days 8,11 and 21 and day 21 timepoints, respectively, as interim analysis showed no significant changes in cochlea histology at other timepoints. Three mice (n=3) were included at each timepoint for all groups. A separate control group (n=3) included mice who did not undergo surgery. The study protocol was approved by the University of Iowa Institutional Animal Care and Use Committee.
Figure 1.

Experimental timeline. Timepoints are in reference to post-surgical time. Red lines mark separate timepoints included in respective groups. Electric stimulation in the relevant groups started on day 7, denoted by the yellow line.
2.2. Electric stimulation, impedance measurements and neural response telemetry (NRT)
Impedance measurements, NRT and electric stimulation programming were performed in Custom Sound EP 4.2 (Cochlear Ltd., AUS) in a procedure identical to that previously published (Claussen et al., 2019). Chronic Insertion, Low Stimulation and High Stimulation groups underwent Impedance measurements for each separate electrode immediately prior to implantation and Impedance and NRT threshold measurements immediately post-operatively and at least weekly thereafter. Electric stimulation was performed by designing a MAP with a dynamic range of 1 between threshold and comfort levels. All functioning electrodes (impedance ≤ 35kOhms) were shorted together during stimulation using a software patch in Custom Sound EP 4.2 (Cochlear Ltd., AUS). This strategy allowed uniform electric stimulation while mice were connected to the CI processor in previously described stimulation cages for 5 hours per day, 5 days a week starting on post-operative day 7 (Claussen et al., 2019). The Low Stimulation groups were programmed to 30CL below neural response threshold as measured by NRT, and the High Stimulation groups were programmed at a CL corresponding to the behavioral response threshold for each animal. Behavioral response threshold was defined as the lowest stimulus level that consistently re-produced changes in usual animal behavior when presented continuously for 30 seconds (e.g. pausing grooming practices with stimulus onset). A prior assessment of behavioral response threshold in this model showed this level to typically approximate the NRT threshold level (Claussen et al., 2019). The MAP was re-adjusted weekly according to any changes in electrode functioning or NRT threshold measurement changes. Within the parameters of the custom CI and emulator system used, 0 CL corresponds to 17.5 μA and 0.44 nC/phase and 255 CL to 1750 μA and 43.75 nC/phase.
2.3. Histology
Left cochleae were harvested at the final respective timepoint for each subject and perfusion fixed with 4% paraformaldehyde. Cochleae were decalcified in 0.1M EDTA (pH 7.5) solution on a rotator that is changed regularly. Confirmation of the end point of decalcification was performed by combining equal parts of 5% Ammonium Hydroxide, 5% Ammonium Oxalate, and used decalcification solution from the specimen container. The decalcification process continued if the solution remained cloudy after 15 minutes. After decalcification, cochleae were washed three times for 10 minutes with PBS. Cochleae were then submersed in a cryoprotectant solution starting at 10% and increasing the cryoprotectant solution concentration by 10% every hour stopping at 30%. Cryoprotected cochleae were stored at −20 C until ready for sectioning. Cochleae were then infused with O.C.T. embedding medium (Tissue-TEK) and mounted to microtome stage with O.C.T. and dry ice. Using the sliding block microtome (American Optical 860) each cochlea was then sectioned in the mid-modiolar plane at 30 microns. Sections were then placed on slides for immunostaining and imaging. CX3CR1+/GFP mice demonstrated endogenously green fluorescent monocytes and macrophages and Thy1+/YFP mice exhibited endogenously yellow fluorescent spiral ganglion neurons and processes. When available, the YFP channel was included in histology pictures. Nuclear staining was performed with 1:1000 Hoechst (Hoechst 33342, Thermo Scientific).
2.4. Microscopy and macrophage quantification
A Leica SP5 (Leica, Germany) inverted confocal microscope was used to acquire 20x images of three serial sections per cochlea that included full views of the implanted basal turn. Imaris software (Bitplane, Switzerland) was used to perform volumetric cell counting through an entire histologic section z-stack. Regions of interest (ROI) including the Scala Tympani (ST), Lateral Wall (LW), Rosenthal’s Canal (RC) were defined by personnel familiar with cochlear microanatomy and blinded to experimental condition. Specifically, the LW region included both the spiral ligament and stria vascularis regions. The volume of the ROI as well as the overall number of all cell nuclei and GFP-positive cells were automatically quantified within the Imaris software and then manually verified by the examiner. These data were used to calculate the ratio of GFP-positive (macrophage) to total cell nuclei and density of GFP-positive cells (macrophages) in a defined ROI volume.
2.5. Statistical analysis
Data were analyzed in R version 4.1.2 (2021-11-01)(“R Core Team,” 2021). Graphs and histology images were made in Adobe Illustrator and Photoshop (Adobe, USA). Multiple linear regression modeling was performed for each separate measure of macrophage density and ratio for each observed location (LW, RC and ST) with time as a continuous variable. Non-linear trends were observed, with each data set being most optimally fit to a non-linear model with a log transformation on days. Pairwise comparisons on each non-linear model were performed as predicted marginal mean comparisons using a false discovery adjustment within the “emmeans” package in R(Lenth, 2016; Lenth et al., 2022; Searle et al., 1980). Notably, the control group was excluded from this analysis secondary to only having 3 observations made, which cannot be defined in the post-operative referenced time-structure of the other experimental groups (as no operation was performed in the control group). However, control group values are included in the following graphs at every time-point for reference to experimental measurements (i.e. the same 3 control group observations are repetitively included at each time point on figures of interest). 95% confidence intervals were used for analysis with statistical significance set at α=0.05; p-values are reported as discrete values for single comparisons or ranges when referencing multiple comparisons.
3. Results
3.1. Electrode impedance increases with time
Figure 2 depicts impedance measurements overtime for separate electrodes at their pre-implantation, post-implantation and final timepoint measurements. Pre-implantation, conditioned electrode impedances ranged from 7.13–17.68 kOhms and post-implantation impedances ranged 9.13–23.85 kOhms (with one outlier at 37.22C kOhms that remained elevated above 35 kOhms on subsequent measurements). This study comprised 162 separate intracochlear electrodes in 54 cochlear implants. Most electrodes (147 or 90.7%) showed a gradual increase in impedance overtime, with a smaller portion of electrodes (15 or 9.3%) showing a sharp increase in impedance to the system testing limit of 125 kOhms, which denotes an open circuit and possible hardware failure (e.g. electrode lead wire fracture). These two distinct patterns of impedance creep are consistent with prior observations in this mouse CI model (Claussen et al., 2019). Within the experimental system, electrodes with impedances at or below 35 kOhms are considered functional; electrodes with impedances greater than 35 kOhms are unable to be stimulated as they are considered to exceed safe limits defined by the Shannon Equation. Table 1 tabulates the number of functional electrodes on each implant at each respective endpoint (n=3 per timepoint and condition). At the furthest timepoint, 21 days post-implantation, 6/9 (66.7%) implants maintained at least 2 functional electrodes, enabling continued stimulation at this point. However, this implies some subjects may not have received the full intended course of electric stimulation. This is improved from prior, reporting only 25% of implants maintaining 2 functional electrode at 21 days post-implantation (Claussen et al., 2019). NRT thresholds were recorded weekly and ranged from 90 – 150CL across the cohort of all functional electrodes. The LS and HS group mean initial programming levels were 72.7CL (range 60–90 CL) and 108.7CL (range 100–150 CL), respectively.
Figure 2.

Baseline and final individual electrode impedance. The individual electrode impedance for the 3 intracochlear electrodes (E1,E2,E3) is plotted as separate colored points, including the initial values immediately before (0-Pre) and after (0-Post) implantation and at the final timepoint. Solid lines trace the mean values (including the nominal 125 kOhm value of open circuit, when occurring) of all electrodes at the respective groups and time-points. The 125 kOhm value for an open circuit is plotted as a dotted black line for reference to help identify values read at this nominal value.
Table 1. Final Electrode Functional Status.
Number of functional electrodes per CI at the final time-point for the respective group and timepoint combinations. The number of functional electrodes per electrode at the final timepoint for each CI is listed, separating individual subjects with a “,”. A functional electrode was defined as having an impedance ≤ 35 kOhms.
| 1 day | 4 days | 7 days | 8 days | 11 days | 14 days | 21 days | ||
|---|---|---|---|---|---|---|---|---|
| Chronic Insertion | 3,3,3 | 3,3,3 | 3,3,3 | 3,3,3 | 0,3,3 | 1,3,3 | 1,1,3 | 2,2,3 |
| Low Stimulation | 3,3,3 | 3,3,3 | 3,3,3 | 2,3,3 | 0,0,2 | |||
| High Stimulation | 2,3,3 | 3,3,3 | 1,3,3 | 0,1,1 | 0,3,3 |
3.2. Cochlear histologic changes following cochlear implantation
Figure 3 depicts representative mid-modiolar sections across groups and timepoints. At baseline in control subjects, a small population of cochlear CX3CR1+ cells was seen throughout the cochlea, notably present within the modiolus, RC, LW and bone marrow spaces within the otic capsule, but absent from the ST. CX3CR1+ positive cells were mostly absent from the sensory cell facing surface of the organ of Corti in all groups, except for isolated, uncommon instances in the ChI, LS and HS groups from days 4–8. However, CX3CR1 positive cells were seen to accumulate near the ST facing side of the basilar membrane and organ of Corti in the ChI, LS and HS groups starting day 4 and onward, additionally showing occasional diffuse staining patterns suggestive of dendritic extension to the sensory cell region of the organ of Corti. The majority of CX3CR1+ cells displayed a ramified morphology with dendritic processes. A varied increase in CX3CR1+ cells was noted across all experimental groups throughout the cochlea, prominently appearing in the LW, RC and modiolus and continuing to exhibit a majority ramified morphology. This influx of CX3CR1+ cells was most robust in the chronically implanted groups (ChI, LS and HS), peaking in the LW between days 7–21 and in RC between days 8–14.
Figure 3.

Cochlear fluorescence microscopy after chronic implantation. Mid-modiolar sections of the basal turn of the left cochlea from respective groups. Macrophage infiltration of the cochlea appears to increase over time and in the presence of the cochlear implant. Cellular infiltration into the ST was seen 7 days after implantation, accompanied by macrophage infiltration. This cellular infiltrate may correspond to the peri-implant ‘tissue response’ and was seen to extend from the round window to the distal electrode tip, with isolated involvement of the scala tympani. The current techniques do not allow visualization of any non-cellular elements of the ‘tissue response’ including fibrotic extracellular matrix, mineralized bone or osteoid. Images show nuclei (Hoechst, blue), macrophages (CX3CR1-GFP, green) and neurons, (Thy1-YFP, yellow).
In response to chronic implantation (ChI, LS and HS groups), a robust cellular infiltrate, including CX3CR1+ cells, was visible in the ST starting on post-operative day 4. As seen in Figure 3, this tissue response formed around the CI electrode array and sometimes completely filled the ST space. This cellular infiltrate may correspond to the the intracochlear tissue response, comprised of fibrosis and neo-ossification, that has previously been seen in multiple animal models of cochlear implantation and post-mortem CI recipient studies. Although the non-cellular components of the cochlear ‘tissue response’ are less appreciable with the current immunohistochemistry techniques used, the extent of this tissue response appears to extend from the round window to the distal electrode tip and be confined to the scala tympani, without involvement of the scala media or vestibuli. The morphology of CX3CR1+ cells within the ST tissue response was more heterogeneous compared to the rest of the cochlea, often including diffusely fluorescent amoeboid cells alongside the ramified cells (Figure 4). The tissue response extended from the round window to the basal turn of the ST but was not seen at areas estimated to be distal to the depth of CI insertion (middle and apical turns). Notably, the AI group displayed a cellular infiltrate immediately adjacent to the round window, mostly absent of CX3CR1+ cells, but this did not extend further into the basal turn of the ST in any subjects (Figure 5). No similar tissue response was seen at the round window in the sham or control groups. No obvious scalar translocations were seen amongst the AI, ChI, LS or HS groups.
Figure 4.

Round window membrane in AI and ChI mice at day 7. A small tissue response (red asterisk) confined to the round window, without an implant tract is seen in the AI group with a small number of CX3CR1+ cells. A similar tissue response (red asterisk) near the round window with an implant tract is seen in the ChI group, accompanied by a more robust monocyte/macrophage infiltrate. The hashed red line represents the estimated threshold of the round window membrane and the red arrow denotes the visible implant tract and associated trajectory in the ChI group. Images show cell nuclei (Hoechst, blue), macrophages (CX3CR1-GFP, green) and neurons, (Thy1-YFP, yellow).
Figure 5.

Basal turn, 14-day High Stimulation. Red arrows highlight the ramified macrophages and white arrows the ameboid macrophages, located in fibrotic tissue of the scala tympani. Labeling includes nuclei (Hoechst, blue), macrophages (CX3CR1-GFP, green) and neurons, (Thy1-YFP, yellow).
3.3. Quantification of CX3CR1+ cellular infiltration
3.3.1. Lateral wall
Quantification of CX3CR1+ cell density and ratio to total cell nuclei in the lateral wall region (including the stria vascularis and spiral ligament) is depicted in Figure 6. Elevated CX3CR1+ cell infiltration was seen in the lateral wall in both the ChI and AI groups as early as 4 hours post-implantation. The AI group maintained a steady plateau of increased CX3CR1+ cell density and cell number compared to controls across all time-points, whereas the ChI group showed continued increase in CX3CR1+ cell infiltration until reaching a steady state from day 7 to 21. Similarly, the CX3CR1+ cell density and ratio remained elevated in the LS and HS groups compared to controls from post-operative day 7 to 21, with a notable peak in LS on day 7. The ChI, LS and HS groups showed greater CX3CR1+ cell density and ratio compared to controls, AI and sham at all timepoints between post-operative days 7 and 21.
Figure 6.

CX3CR1+ cell density and ratio in the lateral wall. Density was calculated as quantity of CX3CR1+ cells per unit volume. Ratio was calculated as quantity of CX3CR1+ cell per total number of cells. Respective symbols indicated in the legend represent mean values with connecting lines bridging unmeasured values. The control group values were repeatedly included at each timepoint for reference and do not represent separate observations. Error bars represent standard error of the mean.
The data for CX3CR1+ cell density and ratio both exhibited non-linear trends and were separately best fit to a non-linear regression model with a log transformation on days. These models explained approximately 60.7% (R2=0.607) and 60.5% (R2=0.605) of the variation of CX3XR1+ cell density and ratio measures, respectively, in the lateral wall region. Estimated marginal means comparisons were used to make pairwise comparisons by day. The AI and Sham groups showed no significant differences (p=0.4145–0.8539) in CX3CR1+ cell density or ratio between each other at any timepoint. The ChI group was significantly different (p=<0.0001–0.0457) than the Sham and AI groups starting at days 1 and 4, respectively, continuing this pattern for the duration of the study time period. Similarly, the LS and HS group CX3CR1+ cell density and ratio measures were significantly different (p=<0.0001–0.002) from the Sham and AI groups from day 7 to day 14, except for the cell density measure at day 7 in the HS groups (p=0.0560). Regarding comparisons between the 3 implanted groups: the HS and ChI groups had significantly (p=<0.0001–0.0080) less CX3CR1+ cell density and ratio compared to the LS group on days 7 and 8. Additionally, the day 11 HS group CX3CR1+ cell density and day 21 ChI group CX3CR1+ cell ratio values were significantly (p=0.0014 and 0.0178, respectively) less than those in the LS group. There were no significant (p=0.6525–0.9475) differences between the ChI and HS groups. These comparisons overall follow the trends seen in Figure 6, where the chronically implanted groups showed generally increased CX3CR1+ cell density and ratio measures compared to the AI and Sham groups throughout the study. The LS group had elevated CX3CR1+ cell density and ratio measures most prominently at day 7, but thereafter decreased to levels that variably followed the ChI and HS groups.
3.3.2. Rosenthal’s canal
Figure 7 depicts quantification of CX3CR1+ cell density and ratio of CX3CR1+ cells to total cell nuclei in Rosenthal’s Canal. CX3CR1+ cell infiltration was minimal among all groups until post-operative day 4, when both CX3CR1+ cell density and ratio raised in both the ChI and Sham groups. CX3CR1+ cell infiltration was generally seen to be elevated in the ChI, LS and HS groups compared to all other groups, reaching a peak from post-operative day 8 to 14 and falling slightly at post-operative day 21; this trend was most prominent across the CX3CR1+ cell ratio metric. The AI group showed a distinct peak in both CX3CR1+ cell density and ratio on day 7 that was increased compared to the control, sham, ChI and HS groups. The sham group showed a peak in CX3CR1+ cell quantification at post-operative day 4, but maintained values close to controls at other time-points.
Figure 7.

CX3CR1+ cell density and ratio in Rosenthal’s Canal. Density was calculated as quantity of CX3CR1+ cells per unit volume. Ratio was calculated as quantity of CX3CR1+ positive cell per total number of cells. Respective symbols indicated in the legend represent mean values with connecting lines bridging unmeasured values. The control group values were repeatedly included at each timepoint for reference and do not represent separate observations. Error bars represent standard error of the mean.
CX3CR1+ cell density and ratio measures in Rosenthal’s canal were best fit to a non-linear regression model with a log transformation on days. These models accounted for approximately 36.1% (R2=0.361) and 34.1% (R2=0.341) in the CX3CR1+ cell density and ratio measures, respectively. Pairwise comparisons by day were made through estimated marginal means comparisons. There were no significant differences between the AI and Sham groups (p=0.7402–0.9858) at any timepoint or between any groups at the 4 hours and 1 day timepoints (p=0.2462–0.9798). The ChI group, as compared to the AI and Sham groups, demonstrated significantly greater CX3CR1+ cell density (p=0.0024–0.0393) from day 4 onward and CX3CR1+ cell ratio (p=0.010–0.0407) from days 4 to 11 (except for ChI vs Sham on day 4; p=0.052). The LS group had significantly (p=0.0023–0.0345) greater CX3CR1+ cell density and ratio compared to AI and sham groups from days 7 to 11 (except for LS vs Sham cell ratio on day 11; p=0.0644). The HS group CX3CR1+ cell density and ratio measures were not significantly (p=0.0633–0.9129) different from the Sham or AI groups at any timepoint. There were no significant (p=0.0682–0.8213) differences between any of the chronically implanted groups except for the HS CX3CR1+ cell ratio being significantly less compared to the ChI group on days 11 (p=0.0262) and 14 (p=0.0394). Overall, the model showed similar trends to the data from Figure 7, including generally less CX3CR1+ cell density in the AI and Sham groups compared to the implanted groups, with the difference being most prominent between days 7 and 14, but with values appearing to converge toward day 21.
YFP neuronal labelling was not available in all subjects, thus we are unable to make comparisons among conditions regarding spiral ganglion neuron survival and response after cochlear implantation.
3.3.3. Scala tympani
Figure 8 depicts the quantification of CX3CR1+ cell density and ratio in the ST. A ST tissue response, including CX3CR1+ cell infiltration and increased cellularity, was seen as early as 4 days post-implantation in the ChI group, with all implanted subjects (ChI, LS and HS groups) showing an intrascalar cellular infiltration comprised of both CX3CR1+ cells and other GFP-negative cells by post-implantation day 7, which persisted until the final time-point at day 21. CX3CR1+ cell density and ratio in the 3 implanted groups was greater compared to the control, AI and Sham groups, in which zero cellular infiltrate was seen, from day 4 onward. CX3CR1+ cell density remained persistently elevated in the implanted groups until the final timepoint at day 21, however CX3CR1+ cell ratio showed a consistent decline amongst all 3 chronically implanted groups on day 21. This reduction in CX3CR1+ cell ratio in the setting of a steady CX3CR1+ cell density suggests an accumulation of other GFP-negative immune (e.g. leukocytes) or non-immune cells (e.g. fibroblasts) within the ST at this final time-point.
Figure 8.

CX3CR1+ cell density and ratio in the Scala Tympani. Density was calculated as quantity of CX3CR1+ cells per unit volume. Ratio was calculated as quantity of CX3CR1+ cells per total number of cells. Respective symbols indicated in the legend represent mean values with connecting lines bridging unmeasured values. The control group values were repeatedly included at each timepoint for reference and do not represent separate observations. Error bars represent standard error of the mean.
CX3CR1+ cell density and ratio measures in the scala tympani were best fit to a non-linear regression model with a transformation on days. This model was restricted to the 3 chronically implanted groups (ChI, LS and HS), as the AI and Sham groups showed zero cellular infiltrate at all tested days. The models accounted for approximately 36.8% (R2=0.368) and 52.1% (R2=0.521) of the variation in the CX3CR1+ cell density and ratio measures, respectively. The ChI group showed significantly greater CX3CR1+ cell density values compared to the HS group on days 14 (p=0.0372) and 21 (p=0.0499); there were no other significant (p=0.0894–0.906) differences in this value among the implanted groups at earlier test days. The HS and ChI groups showed significantly (p=0.0001–0.0494) less CX3CR1+ cell ratio values compared to the LS group on days 7 through 11, and the HS group showed a significantly (p=0.0304) lower cell ratio value than the ChI group at day 21; there were no other significant (p=0.126–0.9939) differences between the 3 implanted groups in the remainder of the comparisons. The CX3CR1+ cell ratio model follows the trend of Figure 8, showing slightly greater values in the LS group compared to the others, with these differences appearing to equalize at later timepoints. The CX3CR1+ cell density model generally follows the persistently elevated values seen in all 3 groups after day 7 but does not highlight the notable peak in ChI values seen at day 11, where no significant differences (p=0.0894–0.293) were found between the groups.
4. Discussion
This study was designed to examine the cochlear innate immune response to cochlear implantation in CX3CR1+/GFP mice across multiple timepoints and assess the separate contributions of surgical trauma (control vs sham vs AI vs ChI), presence of the CI foreign body (AI vs ChI) and electric stimulation (ChI vs LS vs HS). Past work suggests cochlear CX3CR1+cells primarily represent a population of resident cochlear macrophages in both normal and injured cochleae, enabling assessment of the cochlear innate immune response in this study (Hirose et al., 2005). Several consistent patterns of innate immune response were observed in this study, however direct statistical comparisons of observed data were limited by the small sample numbers (n=3 per group at each timepoint) and high number of group and timepoint combinations. Thus, a non-linear regression modelling approach was used to further examine observational trends. As expected from prior studies, a baseline cohort of CX3CR1+ cells was seen throughout the cochlea, notably absent from the acellular spaces of the scalae. Any surgical trauma, including round window opening (sham) and acute CI insertion (AI) caused an increase in CX3CR1+ cells within the lateral wall and Rosenthal’s canal compared to baseline control, which was more pronounced with chronic CI insertion (ChI, LS and HS). Surgical trauma alone was not sufficient to induce a ST tissue response beyond the round window; Chronic CI insertion was necessary for formation of a ST tissue response. Varying the degree of electric stimulation did not consistently affect the innate immune response to cochlear implantation. Taken together, these observations suggest surgical trauma alone may induce a cochlear innate immune response, but the chronic presence of an indwelling electrode array further augments the cochlear inflammatory response and is necessary in formation of a ST tissue response. Although likely multifactorial, this observation points to a critical role that the foreign body response to cochlear implant biomaterials plays in the cochlear inflammation, fibrosis and neo-ossification following cochlear implantation (Foggia et al., 2019).
The robust peri-implant cellular infiltrate in the ST of the chronically implanted groups was similar in extent to that previously published in multiple mouse CI model, in which the ST was occupied with fibrotic tissue and areas of neo-ossification confined to the depth of CI insertion. (Claussen et al., 2019; Colesa et al., 2021; Irving et al., 2013; Mistry et al., 2014). CX3CR1+ cells were seen to comprise a substantial element of the ST response between days 7 and 11, accounting for over 50% of the cells within the ST of some subjects. Mistry et al. (2014) found a similar ST tissue response that also began appearing 7 days after implantation (Mistry et al., 2014). Similar patterns of tissue response have been documented in implanted human temporal bones, accompanied by both innate (e.g. monocytes, macrophages) (Noonan et al., 2020; Okayasu et al., 2020) and adaptive immune cells (e.g. B-cells, T-cells) (Nadol et al., 2014). However, the human intrascalar tissue response is sometimes seen to extend further past the depth of CI insertion or into other scala, especially in the setting of scalar translocations (Kamakura & Nadol, 2016; P. M. M. C. Li et al., 2007). The current key findings of the tissue response being exclusively present in the chronically implanted groups and confined to areas directly adjacent to the CI highlights the role of the electrode array itself in driving and organizing the tissue response. Evidence of such a foreign body response has been seen in humans in the form of phagocytosed implant materials and foreign body giant cells (Nadol et al., 2008; O’Malley et al., 2017) and was recently reviewed by Foggia et al. (Foggia et al., 2019). In this special issue, Jensen et al., present new data comparing the foreign body response to different CI materials (e.g. silastic and platinum).
It is not understood what effect, if any, electric stimulation may have on the cochlear immune response and fibrosis after cochlear implantation and if it would be mediated by electrode material composition or direct electric effect on surrounding tissues. Different patterns of tissue fibrosis surrounding the CI relating to the location of the platinum electrodes have been seen in human temporal bones (Ishai et al., 2017). Further, platinum dissolution into the scala has been demonstrated in guinea pig models of CI at charge densities above those used in the clinical setting, with the potential consequence of enhancing the foreign body response (Shepherd et al., 2019b). We did not find any consistent, overall effect of the levels of electric stimulation used in this study on the innate immune response or degree of ST cellular infiltrate. However, this conclusion may be obscured by low sample numbers, which may have limited our ability to detect and model significant differences related to the degree of electric stimulation. Additionally, the intensities of electric stimulation levels used (LS: 30 CL below NRT and HS: behavioral threshold level, approximately at NRT) were skewed to levels that more approximate the lower end of the dynamic range between the threshold and comfort levels used in typical clinical CI programming (Allam & Eldegwi, 2019; Muhaimeed et al., 2010). In-vitro data from non-inner ear immune cell populations suggests a direct effect of artificial DC electric stimulation on macrophage phenotype (Hoare et al., 2016; Kis-Toth et al., 2011; C. Li et al., 2016). However it is not known if a similar effect or other inner ear physiologic consequence can directly result from the AC electric stimulation from a CI; past in-vitro observations of AC stimulation effects in other non-inner ear systems have not consistently translated to measurable, in-vivo findings (Moriarty & Borgens, 1999). Irving et al. (2013) also found no difference in fibrous tissue growth after cochlear implantation in mice in both stimulated and unstimulated conditions (Irving et al., 2013). Although overall rates of hardware failure (e.g. electrode impedance increasing to a level prohibiting electric stimulation) improved in this study prior to that published in Claussen et al. (2019), impedance creep and electrode failure did occur, hampering electric stimulation at the longest time points in the stimulation groups, which may hinder electric stimulation for the full intended duration of the study. Impedance increases are a common finding in mouse CI models, with Colesa et al. (2021) showing gradual rises in impedance, but continued ability to stimulate subjects up to 42 days post-implantation (Colesa et al., 2021). Notably, the charge densities used in this study were approximately 2 orders of magnitude below those shown to result in local platinum dissolution from the CI electrodes. Further, the robust and rapid development of a ST cellular infiltrate in the mouse CI model may obscure any small effects resulting from varied electric stimulation intensities, such as distribution of soft tissue fibrosis versus neo-ossification, which were not detectable with the histologic methods used in this study. We refer readers to Jensen et al. in this issue, where 3D X-ray microscopy was used to demonstrate a greater propensity for neo-ossification around platinum surfaces of the CI as opposed to silicone surfaces in a mouse CI model.
In the current study, we cannot completely separate the role of insertion trauma from the foreign body effects of an indwelling CI toward eliciting a cochlear innate immune response, as the potential for insertion trauma is inherent to chronic cochlear implantation. Additionally, there was insufficient histologic detail (specifically lack of bony detail of the osseus spiral lamina and absence of the physical implant included in the imaged sections) in the immunohistochemical techniques used to apply previously published CI insertional trauma grading scales and thus, an assessment of insertional trauma was limited to binned categorizations of no surgery (controls), round window opening only (sham) and implant insertion (AI, ChI, LS, HS) (Eshraghi et al., 2003; Roland & Wright, 2006). However, round window opening and acute CI insertion alone, in the absence of obvious scalar translocations, was not sufficient to generate a tissue response beyond the immediate round window, but did elicit a cochlear innate immune response, albeit to a lesser degree, to chronic implantation. Other factors shown to promote cochlear fibrosis include surgical trauma from cochleostomy, use of muscle to seal round window and perilymphatic introduction of bone dust (McELVEEN et al., 1995; Rowe et al., 2016). However, these factors may not have influenced this study, as a round window approach was used that involved minimal drilling of the round window niche with irrigation of any bone dust prior to round window opening and use of fascia, not muscle to seal the round window. A cellular infiltrate mostly devoid of CX3CR1+ cells was seen immediately at the round window in the acute insertion group, which may relate to the local irritation from round window niche drilling or the placement of a fascia graft to seal the round window. There is ample evidence to suggest that major insertional trauma events, including scalar translocation and osseus spiral lamina fracture, may influence fibrosis and neo-ossification after cochlear implantation, however none of these events were seen in the present study to validate these causative factors (Kamakura & Nadol, 2016; Kopelovich, Robinson, et al., 2015; P. M. M. C. Li et al., 2007; O’Leary et al., 2013). It is also possible that insertional trauma differences between each individual surgery may partially account for the variation seen both between and within the implanted groups. Based on these present and past findings, we observe that the CI insertion event generates an innate immune response and speculate that the immune cells and accompanying milieu of inflammatory mediators (e.g. chemokines, cytokines, growth factors) help initiate the foreign body response and fibrotic tissue reaction to the CI in an exposure dependent manner that may be commensurate with the degree of insertional trauma – further studies are needed to examine this. Understanding the mechanisms of how insertion trauma elicits an innate immune response is beyond the scope this study, but we hypothesize this broadly includes initiation of sterile inflammation through direct (e.g. physical cellular insult from force of insertion) and collateral (e.g. altered homeostasis and cell death related to trauma) generation of damage-associated molecular patterns and other inflammatory signals, the degree to which may vary with the severity of insertion trauma. (Klegeris, 2021; Mariani et al., 2019; Wood & Zuo, 2017).
In the normal mouse cochlea, CX3CR1+ cells mostly represent resident cochlear macrophages along with a smaller subset of other immune cells (e.g. NK cells, T cells) (Hirose et al., 2005). The increase in CX3CR1+ cells in the current study, especially in the chronic insertion groups, is similar to that following other cochlear injuries, including noise exposure and isolated outer hair cell ablation, and is seen to consistently peak 14 days post-injury across several studies (Kaur et al., 2015; Rai et al., 2020; Tan et al., 2016). The nature of this increase in cochlear CX3CR1+ cells is likely due to migration of cochlear macrophages from the circulation, based on prior studies examining local proliferation of CX3CR1+ cells in the cochlea after noise (Hirose et al., 2005). An increase in circulating monocytes and tissue macrophages that exhibit low or no expression of CX3CR1+ also occurs following cochlear, neural and other tissue injury, however, the current study was not designed to detect these additional elements of the innate immune response (Hirose et al., 2014; Puntambekar et al., 2018; Wynn & Vannella, 2016). As evidence of a continued evolution of the inflammatory response, we saw a decrease in the ratio of macrophages to total number of cells within the ST in the chronically implanted groups from day 8 to 21 in the setting of a relatively stable trend of CX3CR1+ cell density. This finding may provide indirect evidence of evolving macrophage phenotype away from CX3CR1+ cells and an increase in other cells involved in fibrosis (e.g. myofibroblasts) that would contribute to maturation of the inflammatory response. The nature of cochlear implantation involving a chronic insult in the form of the CI foreign body may produce diverging temporal courses and phenotypes of the immune response compared to the other studies mentioned, which involve acute, single event injuries. The current study is limited by the absence of hearing loss prior to cochlear implantation and any associated alterations to or priming of the baseline resident macrophage population. Future work is needed to more broadly examine the evolving macrophage phenotypes not captured in the CX3CR1+/GFP mouse CI model and to include prior deafening to more closely model the cochlear immune state prior to implantation as seen in the clinical context.
CX3CR1+ cell migration into the sensory cell facing surface of the organ of Corti was an uncommon event, with the more common event being an increase in CX3CR1+ cells on the ST facing side of the organ of Corti following chronic cochlear implantation. This is a common histologic finding in other cochlear and, specifically, sensory hair cell insults, where macrophages are seen to accumulate near the habenula perforata and the under-surface of the basilar membrane and send dendritic extensions into the region of the damaged sensory hair cells (Hirose et al., 2005, 2017; Sato et al., 2010). These findings build on past work, showing the relative immunologic privilege of the rodent organ of Corti to macrophage infiltration persists in the setting of cochlear implantation. Further work, including assessment of sensory hair cell status after cochlear implantation and correlation with post-CI hearing preservation outcomes is needed to clarify the significance of these observations of the innate immune response in the organ of Corti after cochlear implantation.
CX3CR1+ macrophages play diverse roles including local surveillance for pathogens, debris clearance of damaged cells, and antigen presentation. Macrophage morphology is often associated with function, with ramified cells playing a surveillance role and amoeboid cells representing an activated, phagocytic phenotype (Savage et al., 2019). In the present study, a diversity of amoeboid and ramified morphologies of CX3CR1+ cells were seen, which is consistent with findings in implanted human cadaveric studies (Noonan et al., 2020). Macrophage phenotype or “polarization” has further been characterized along a spectrum of M1 (inflammatory) and M2 (anti-inflammatory) subtypes. Recent transcriptomic and flow cytometry data report additional complexity in distinguishing subtypes and their contributions to inflammation, fibrosis, tissue repair and regeneration (Parakalan et al., 2012; Rai et al., 2020; Wynn & Vannella, 2016). Within the cochlea, CX3CR1+ macrophages have been implicated in protective and homeostatic functions for spiral ganglion neurons following hair cell or direct neuronal injury (Kaur et al., 2015; Lang et al., 2016). Conversely, in other tissues, CX3CR1+ macrophages have shown an inflammatory and pro-fibrotic phenotype, particularly in the setting of pulmonary fibrosis (Aran et al., 2019; Wynn & Vannella, 2016). This pro-fibrotic subtype may be relevant to the present CI model, as the most robust increase in CX3CR1+ cells was seen in the fibrous tissue growth around the CI. However, the current data cannot definitively attribute any pro-fibrotic or other specific role CX3CR1+ macrophages in the cochlea.
The current study provides a high temporal resolution view of the initial innate immune response following cochlear implantation. However, the increased number of timepoints necessary to achieve this temporal resolution amongst 5 experimental groups limited the number of observations at each experimental condition to n=3. The non-linear regression modelling strategy borrows strength across time-points and from the total overall number of observations but left some variation in the data unexplained that could be accounted for by other factors. Prioritization was given to maximizing mouse utilization of the appropriate genotype over balance or homogeneity in sex, which along with the odd number of subjects allocated to each experimental condition (n=3), necessarily resulted in heterogeneity of the male and female numbers used at each timepoint. Additionally, microscopic insertional trauma likely varied between each surgical event, owing to the kinematic restraints of human movement in microsurgery (Kesler et al., 2017). These differences in sex and surgery may account for some of the additional variance seen in the data and should be considered in future study design. Future mouse CI experimental design may also be informed by the better understanding of the time course of key events in the post-CI inflammatory response (e.g. ST cellular infiltrate consistent seen by day 7) shown in the present data to allow refinement of observational timepoints.
These experiments highlight the utility of a mouse model of functional CI, which can be combined with transgenic mouse models to investigate both the cochlear immune response to CI (as in this study) and potentially extend to investigating CI in other models of hearing loss. The applications of CX3CR1+/GFP mice in a CI model extend beyond direct observation of the cochlear innate immune response and may be useful for studying the efficacy and mechanism of future strategies directed at mitigating the post-implantation fibrotic response and preserving residual acoustic hearing in hybrid cochlear implantation (Tarabichi et al., 2021). Limitations of the mouse CI model include CI lead wire fracture and hardware failure that limit long-term stimulation. However, the current experiments show improvement in rates of electrode durability compared to prior work. The rapid time-course (7–8 days) of peri-implant ST tissue response in implanted mice may not accurately model the similar time-course seen in humans, but does result in a similar macrophage infiltrate and areas of fibrotic soft tissue and neo-ossification (Noonan et al., 2020; Seyyedi & Nadol, 2014). These findings may help direct future studies in other CI animal model species, in which longer-term studies are more feasible.
5. Conclusion
Chronic CI placement in CX3CR1+/GFP mice results in a robust innate immune response shown by an increase in CX3CR1+ cells throughout the cochlea, accompanied by a peri-implant ST cellular infiltrate similar to that seen in humans. This tissue response is not significantly affected by the level of electric stimulation. Surgical trauma related to cochlear implantation alone initiated an innate immune response in the lateral wall and Rosenthal’s canal that was blunted compared to the response in chronically implanted cochleae. Further, surgical trauma alone did not lead to significant cellular infiltration into the ST. This suggests that the foreign body reaction to a chronically implanted device is more important than the contribution of surgical trauma in the formation of cochlear fibrosis and remodeling of the cochlear architecture. Future work is needed to understand the role CX3CR1+ macrophages in the cochlear response to cochlear implantation as well as further elucidate the broader innate and adaptive immune response over time. Such insights may be useful in developing and measuring the efficacy of strategies to reduce the cochlear tissue response and loss of residual acoustic hearing after cochlear implantation.
Acknowledgements
Support for these studies was provided by National Institutes of Health, National Institute on Deafness and Other Communication Disorders, Besthesda MD [grant numbers R01 DC012578 (MRH), R01 DC011315 (KH), T32 DC000040 (ADC, MRH), and UL1TR002537 (MRH)], and Cochlear Americas, Centennial, CO [grant number 17881800-01].
Declaration of Interest
This research was partially funded by and performed in collaboration with Cochlear Americas as research partners, with no financial or non-financial influence dependent on the outcome or reporting and sharing of data. MRH is a co-founder and Chief Medical Officer of iotaMotion Inc with equity interest. JRK is employed by Cochlear Limited.
Abbreviations
- AI
acute insertion
- ChI
chronic insertion
- CI
cochlear implant
- CL
clinical level
- FBR
foreign body response
- GFP
green fluorescent protein
- HS
high stimulation
- LS
low stimulation
- LW
lateral wall
- NRT
neural response telemetry
- PBS
phosphate buffered saline
- ROI
region of interest
- RC
Rosenthal’s canal
- ST
scala tympani
- YFP
yellow fluorescent protein
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