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. 2022 Sep 27;10(10):1916. doi: 10.3390/microorganisms10101916

Table 3.

B-cell epitopes of Ca. M. haemobos and M. wenyonii predicted by immunoinformatics.

Ca. M. Haemobos
INIFAP01
M. wenyonii
INIFAP02
RAST
Category: Virulence, disease, and defense
Predicted epitopes (SVMTrip, recommend score 1.0) Predicted epitopes
(BCEPred)
RAST Category: Virulence, disease, and defense Predicted epitopes (SVMTrip, recommend score 1.0) Predicted epitopes
(BCEPred)
DNA gyrase subunit B RKLALEGFMSFAGKLADCTT AGGDSSDSGGQYTDS
GGKFDNNSYKTSGG *
EVNVYRNGEEHY
ENGGKIKDEPKMVSKCEEDKTG
IESRLTKLAYLNKGKKFV
VNEITKEEKEFFYEEGIKDW
FIHSEGKVKNRRAPE
FGRFLEENPEQRKVILQRVDQERNFRLK
VVEGDSAGGSAKSARNREYQAI
NVWKRSKYTAILENEEVKSL
NKEVVYLFDDKKKDEFLKNLSNP
Ribosomal protein SSU S7p MWEGKKQLARRIVYNALEKI NALEKIREKTEKNPVEV
YQVPVESSKERREALA LIKYSRKRN
SSU ribosomal protein S7p PLEVFMEALKNIAPTIELKT Translation elongation factor G IPKEYIKSIREGLVDAMKAG
VPRIIFCNKMDKVGASFQSS
DAGKTTTSERDWMEQEREKGITDEEFEEIPI
PEDQQEEVKTLR
KAFTRSGEELTIENKDESN
Translation elongation factor G EFVDKIVGGKIPKEYIKSIK
AKVIKSKIPLKEMFGYATAL
DWMEQEKEKGIT
TKKAYEFDGKQEEEYKEIPI
ETPAFDKEQNPISIKNSPDNDF
QMHSNHRTEIES
AIEPKTKVDQEKMSM
FRETFTQEAEVEGKYIKQSGGRG
HVWIKYEPNKDKGFEF
LSLKDASKKCASILLEPI
SRRGTIEGDEQVENAKVIKSKIPLKEM
Ribosomal protein SSU S12p RVKDLPGVKYHIIRGKLDAA VEKRKKERSKYGVKKEKKS
SSU ribosomal protein S12p RVKDLPGVKYHIVRGKLDTV Ribosomal protein LSU L35p SHRSHCASAKTTKRKRQLRK KKIKHKTKKSLSKR
SGAIKRKRSHRS
SGAIKRKRSHRSHCASAKTTKRKRQLRKSA

* To distinguish the complete sequences of the epitopes they are shown as bolded.