Table 3.
Different genes of Citrate cycle (TCA cycle) pathway.
| Gene ID | Log2 FC | Significant | FDR | Description | |||
|---|---|---|---|---|---|---|---|
| B/A | C/A | B/A | C/A | B/A | C/A | ||
| BLU65_RS00350 | −1.64 | −1.53 | yes | no | 1.41 × 10−2 | 1.16 × 10−1 | alpha-ketoacid dehydrogenase subunit beta |
| BLU65_RS00705 | 1.87 | 5.13 | yes | yes | 1.83 × 10−4 | 2.28 × 10−5 | class II fumarate hydratase |
| BLU65_RS03630 | 1.56 | 1.80 | yes | yes | 4.94 × 10−6 | 4.69 × 10−3 | phosphoenolpyruvate carboxykinase (ATP) |
| BLU65_RS05250 | 1.53 | 0.15 | yes | no | 3.40 × 10−7 | 9.61 × 10−1 | pyruvate carboxylase subunit A |
| BLU65_RS11635 | 2.24 | 1.66 | yes | yes | 4.63 × 10−9 | 9.35 × 10−3 | fumarate hydratase |
| BLU65_RS15190 | 2.41 | 2.09 | yes | yes | 2.70 × 10−14 | 6.88 × 10−4 | isocitrate dehydrogenase |
| BLU65_RS26350 | 2.11 | 2.32 | yes | yes | 1.28 × 10−9 | 4.87 × 10−5 | 2-oxoglutarate dehydrogenase |
| BLU65_RS26355 | 1.64 | 1.49 | yes | yes | 5.02 × 10−8 | 3.97 × 10−3 | succinate dehydrogenase |
| BLU65_RS26360 | 1.45 | 1.55 | yes | yes | 8.56 × 10−6 | 7.68 × 10−3 | succinate dehydrogenase |
| aceE | 1.18 | 2.39 | yes | yes | 2.94 × 10−3 | 1.41 × 10−4 | pyruvate dehydrogenase (acetyl-transferring), homodimeric type |
| aceF | 0.61 | 1.56 | no | yes | 1.01 × 10−1 | 3.16 × 10−2 | dihydrolipoyllysine-residue acetyltransferase |
| acnB | 2.56 | 2.42 | yes | yes | 5.15 × 10−14 | 1.12 × 10−5 | aconitase |
| gltA | 1.82 | 1.11 | yes | no | 2.48 × 10−6 | 8.55 × 10−2 | citrate synthase I, hexameric type |
| oadA | 2.32 | 0.86 | yes | no | 1.76 × 10−14 | 1.66 × 10−1 | pyruvate carboxylase subunit B |
| odhB | 1.69 | 1.53 | yes | yes | 2.38 × 10−7 | 9.35 × 10−3 | 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase |
| sdhC | 1.50 | 1.58 | yes | yes | 1.89 × 10−5 | 5.42 × 10−3 | succinate dehydrogenase |
| sucC | 1.78 | 1.78 | yes | yes | 4.87 × 10−6 | 2.97 × 10−3 | Succinyl-CoA ligase [ADP-forming] subunit beta |
| sucD | 2.48 | 2.12 | yes | yes | 5.97 × 10−13 | 2.99 × 10−4 | succinyl-CoA synthetase, alpha subunit |
Yes/No stand for a significant/insignificant difference were detected. Log2 FC: the value of the fold change (FC) of the current comparison group after log2. A: soluble P; B: insoluble P; C: lacking P.