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PLOS Neglected Tropical Diseases logoLink to PLOS Neglected Tropical Diseases
. 2022 Oct 20;16(10):e0010347. doi: 10.1371/journal.pntd.0010347

Livestock and rodents within an endemic focus of Visceral Leishmaniasis are not reservoir hosts for Leishmania donovani

Anurag Kumar Kushwaha 1, Ashish Shukla 1, Breanna M Scorza 2, Tulika Kumari Rai 1, Rahul Chaubey 3, Dharmendra Kumar Maurya 4, Shweta Srivastva 1, Shreya Upadhyay 1, Abhishek Kumar Singh 1, Paritosh Malviya 1, Om Prakash Singh 1,4, Vivek Kumar Scholar 3, Puja Tiwary 1, Shakti Kumar Singh 3, Phillip Lawyer 5, Edgar Rowton 6, Scott A Bernhardt 7, Christine A Petersen 2,8,*, Shyam Sundar 1,*
Editor: Shan Lv9
PMCID: PMC9624431  PMID: 36264975

Abstract

Leishmaniasis on the Indian subcontinent is thought to have an anthroponotic transmission cycle. There is no direct evidence that a mammalian host other than humans can be infected with Leishmania donovani and transmit infection to the sand fly vector. The aim of the present study was to evaluate the impact of sand fly feeding on other domestic species and provide clinical evidence regarding possible non-human reservoirs through experimental sand fly feeding on cows, water buffalo goats and rodents. We performed xenodiagnosis using colonized Phlebotomus argentipes sand flies to feed on animals residing in villages with active Leishmania transmission based on current human cases. Xenodiagnoses on mammals within the endemic area were performed and blood-fed flies were analyzed for the presence of Leishmania via qPCR 48hrs after feeding. Blood samples were also collected from these mammals for qPCR and serology. Although we found evidence of Leishmania infection within some domestic mammals, they were not infectious to vector sand flies. Monitoring infection in sand flies and non-human blood meal sources in endemic villages leads to scientific proof of exposure and parasitemia in resident mammals. Lack of infectiousness of these domestic mammals to vector sand flies indicates that they likely play no role, or a very limited role in Leishmania donovani transmission to people in Bihar. Therefore, a surveillance system in the peri-/post-elimination phase of visceral leishmaniasis (VL) must monitor absence of transmission. Continued surveillance of domestic mammals in outbreak villages is necessary to ensure that a non-human reservoir is not established, including domestic mammals not present in this study, specifically dogs.

Author summary

Leishmania donovani, the causative agent of visceral leishmaniasis (VL), has unique enzootic, zoonotic and anthroponotic life cycles dependent on geographic region. Most Leishmania spp. are zoonotic, transmitted between humans and non-human mammals. Leishmaniasis is endemic in over 98 countries and the estimated population at risk on the Indian sub-continent (ISC) is around 0.2–0.4 million people. Herein, we assess knowledge gaps in disease transmission that challenge dogma regarding the reservoir(s) of visceral leishmaniasis and control efforts on the Indian sub-continent. Better understanding of L. donovani infection in domestic animals and its transmission to sand flies will provide answers to fundamental questions in VL epidemiology and ecology. Blood samples were collected from livestock and rodents in endemic villages and colonized sand flies were fed on these animals and analyzed post feeding to see if they could pick up parasites via bloodmeal. We found that livestock and to a smaller extent rodents could be infected with or exposed to Leishmania infection. However, these mammals were not infectious to Phlebotomus argentipes, the predominant vector species incriminated as transmitting L. donovani in India. The inability of these domestic mammals to transmit L. donovani to sand flies in Bihar suggests that they play a limited role in the spread of infection. A key component in reducing and preventing the re-emergence of VL in the context of the elimination program is to understand the role of vector feeding on non-human animals in the transmission cycle. Better estimation of the proportion of the livestock and rodent population exposed to sand flies during different seasons and ensuring that there are not reservoir species that contribute to transmission will help implement appropriate control strategies for sustainable elimination.

1.Introduction

Leishmaniasis is a vector-borne disease of humans and other mammals caused by at least 20 species of obligate protozoan parasites of the genus Leishmania (Trypanosomatida: Trypanosomatidae) with notable prevalence in more than 98 countries and territories [1]. Visceral leishmaniasis (VL), caused by Leishmania donovani- complex species, occurs in localized outbreaks within endemic regions of the Indian subcontinent, East Africa and Brazil with significant mortality [24]. L. donovani complex spp. infect humans as well as different mammalian species. Dependent on the presence or absence of a reservoir host, there are two primary types of epidemiological cycles: zoonotic VL, generally caused by L. infantum, with dogs as the primary reservoir host in the Mediterranean, the Middle East, Asia and South America; and anthroponotic VL, caused by L. donovani in the Indian subcontinent (ISC), with humans serving as the predominant mammalian host. VL is a major public health burden in the ISC, with 200 million residents at risk of infection, and roughly two thirds of the worldwide VL cases [2]. Over 61% of all Indian regions affected by VL (33 of 54 districts) are within Bihar state, reporting 70% of the VL burden from India [5]. Unlike in other regions of the world [6], VL is considered anthroponotic on the ISC due to the absence of direct evidence regarding a non-human reservoir [7,8]. In other regions, both humans and dogs are reservoirs unlike in India, or that are sources of infection to vectors [2].

Due to robust elimination efforts of the governments of India, Nepal and Bangladesh, as well as the World Health Organization, prevalence of VL on the ISC has reached its lowest level since the 1960s with an annual incidence of less than 1 per 10,000 population in 98% (617/633) of Indian blocks by 2020 [9]. In this low-incidence setting, attention is focused on early screening in previously endemic areas and intervention in outbreaks. Outbreak investigations consist of surveillance procedures to establish an outbreak based on newly reported case numbers in the region then implementation of relevant interventions, and, when possible, identification of local risk factors to prevent parasite transmission [10]. To continue to have elimination-level case numbers over the coming years, it will be essential to maintain the ability of the public health system to forecast and monitor outbreaks of VL, as well as to quickly implement effective control measures. Indoor residual spraying (IRS) is used in endemic villages for vector management, impacting primarily sand flies resting inside dwellings. Amid mounting indications of resistance to dichlorodiphenyltrichloroethane (DDT), efforts across the ISC switched to use of synthetic pyrethroids in India by 2015 [5]. It has been hypothesized that due to the ecological pressure of IRS, remaining surviving sand flies have been selected for being less endophilic. Phlebotomus argentipes is the primary vector for L. donovani in this region, aggregating in animal shelters and mixed dwellings, which provide a suitable, steady micro-climate [1113]. Sand flies have a proclivity for feeding on both ruminants and people in this habitat [12,14,15] and the potential to change infection dynamics by feeding on non-human hosts [16]. Studies in L. donovani foci on the ISC and Africa confirmed Leishmania exposure and infection in domestic mammals, but scientific evidence of their involvement as domestic reservoirs involved in transmission to people is still unclear [1728]. Importantly, the genetically similar species, Leishmania infantum, found in Latin America and the Mediterranean basin is zoonotic with canids, including domestic dogs, foxes, jackals, lagomorphs, and wild rodents as significant reservoir hosts [29,30]. A high density of livestock is thought to be one of the risk factors for human VL in India [13]. There are also conflicting results regarding the role of domestic mammals as blood meal sources for P. argentipes and the resultant impact on VL epidemiology in the ISC [7]. For example, higher livestock density is associated with the reduction of Leishmania exposure in Nepal and Bangladesh [31,32], perhaps serving as an ecological sink for L. donovani infection, while increased VL risk is correlated with the presence of livestock in peri-domestic vegetation in India and Bangladesh [3335].

Globally, epidemiological reports have identified evidence of infection or exposure to L. donovani in multiple domestic mammals indicates the possibility that L. donovani could be zoonotic [6]. However, to efficiently manage VL within a control program, it is necessary to determine the amount to which such non-human hosts are infectious to sand flies. Non-human sources of infection are not targeted through current VL elimination program interventions in the ISC. Mathematical modelling and observational studies posited that livestock as hosts for human L. donovani infection in the ISC could potentiate outbreaks or ongoing infection [14,17,3638]. Finding a significant number of infected animals epidemiologically connected to human L. donovani exposure as well as demonstrating the infectiousness of domestic livestock to sand flies would establish the extent to which these animals contribute to VL ecology in endemic villages [6]. Xenodiagnosis is the most effective way to establish Leishmania infectiousness of a specific host to sand flies [39]. Our study aims to detect Leishmania infection and/or exposure in livestock and rodents from VL endemic villages of Muzaffarpur district in Bihar, India and identify their relative infectiousness to sand flies.

2. Methodology

2.1 Ethics statement

This work was conducted with ethical approval (Letter No- CAEC/Dean/2014/CAEC/615) obtained from Institutional Review Committees of Banaras Hindu University, Varanasi, India; and Kala-azar Medical Research Centre (KAMRC), Muzaffarpur, India and University of Iowa Institutional Animal Care and Use Committee (IACUC) protocol number 9041721. In addition to the IACUC protocol, we asked approval from head of households to work with their animals and verbally assured the safety and comfort of these animals during sampling.

2.2 Selection of study area and epidemiological database

The study area included 15 villages across Muzaffarpur district (26.07°N, 85.45°E) in Bihar State, India where VL is highly endemic. The humid tropical temperatures of Muzaffarpur range from 14°C in December–January to 32°C in April–May with average annual precipitation of about 1,300 mm during the monsoon season from June to September. Villages with active transmission were selected based on current and past VL history from the Muzaffarpur-TMRC Health and Demographic Surveillance System (HDSS), ongoing since 2007 [40] and Kala-azar Management Information System (KAMIS) [10] (Fig 1).

Fig 1. Geographical location of livestock and rodents sampling and rk39 ELISA positivity across Muzaffarpur district Bihar, India.

Fig 1

Map base layers have adapted or reproduced from Malaviya et al., 2011 [70], published under CC.

2.3 Sampling procedures

Sample size was based on the assumption that the true proportion of infective animals would likely be very low (<1/100) which will allow us to show with 90% power that the proportion infective in the sampled population is less than 2%. Using an exact one-sided binomial test at the 2.5% level, a sample size of n = 200, we would have at least 90% power to find a proportion infective in less than 2% of the overall group of animals. These calculations were made via R, running simulations of outcomes for samples sizes between 100–400.

Adult livestock of both sexes were selected for blood sampling and xenodiagnosis with prior approval from the head of household. Cows, water buffaloes and goats were restrained via rope/halters and 1 ml whole blood was withdrawn from either the jugular or ear vein of each animal. Whole blood samples were collected in EDTA and red topped vacutainer tubes for serum and transported on ice packs (4°C) from the field to the KAMRC laboratory where samples were aliquoted and stored at -20°C for serological and molecular assays. Physical examination was performed on livestock, and history of any illness was noted. Rodents were caught using locally purchased live traps baited with bread. Traps were placed overnight in close proximity (~2 meters) to homes and livestock shelters. Fifty-one rats and 11 shrews and three voles were caught. Shrews were often found dead in the traps with no bread bait consumed. Voles and rats caught by live traps were immobilized in a plastic restraint and anaesthetized via intra-peritoneal injection of ketamine and xylazine according to body weight. All rodent blood was drawn after xenodiagnosis then euthanized via CO2 chamber followed by splenic dissection. Spleen was kept in 1X PBS for subsequent DNA extraction at -20°C.

2.4 Preparation of sand flies for xenodiagnosis

Phlebotomus argentipes sand flies from a closed, certified pathogen-free colony maintained at the KAMRC were used for xenodiagnosis [41]. Depending on the blood source and the proportion of flies in the feeding cup, feeding success ranged from 5 to 65 percent. With 30–50 females per feeding cup, close to optimal feeding (>60%) was achieved (plus 10 males). These findings and prior investigations led to a decision to limit the number of female P. argentipes per meal to 30–35, plus 10 males, and expose two feeding cups per mammals. The females used were three to five-day old (mature) and 12-hour starved [41,42].

2.5 Xenodiagnosis on animals

Infectiousness of livestock and rodents was tested by direct feeding of 30–35 female P. argentipes as previously described [4246]. Feeding cups were placed on ears and axillary areas of livestock for 30 minutes under local environmental conditions (July- Monsoon, Feb- Winter, Oct- Spring) while xenodiagnosis on rodents were done in laboratory (Fig 2). Due to poor physical condition due to not consuming the bait overnight, shrews and voles were not used for xenodiagnosis. Once back to the insectary, blood-engorged females were placed into 1-pint paper cups and kept in an environmental chamber at 28°C and 80% humidity for 48 hrs. provided with 30% sugar-saturated cotton balls on the screen top. After 48 hrs. of an infected blood meal, the peritrophic membrane breaks down and procyclic promastigotes and nectomonads are detectable in sand fly midgut. Because of this after 48 hrs., blood fed flies were stored in 70% ethanol at -20°C for further DNA extraction and qPCR for L. donovani [41]. The whole fly was processed for extraction.

Fig 2. Process of xenodiagnosis on different domestic animals in village settings.

Fig 2

Each person featured in the photo provided consent for the photo to be used in this article.

2.6 DNA extraction from whole blood, splenic biopsy, and blood- fed sand flies

DNA was extracted from blood (200 μl) and spleen (25mg) by QIAamp Blood and tissue DNA mini kit (Qiagen, Hilden, Germany) in 60 μl of nuclease free water (Milli-Q) in accordance with the manufacturer’s instructions. From single blood-fed sand flies, DNA was extracted 48 hrs. after xenodiagnosis via Gentra Puregene Tissue DNA Extraction Kit (Qiagen). To achieve maximum yield, tissue digestion was performed overnight with proteinase K in lysis buffer and increased the protein precipitation timing at -20°C for overnight. DNA was eluted in 30 μl of Milli-Q and stored at -20°C for downstream processing. This protocol was optimized for individual sand flies [46]. The quality of extracted DNA from samples (Blood, tissue and sand flies) was assessed by spectrophotometer (ND-2000 spectrophotometer; Thermo Scientific, USA). DNA samples having 260/280 ratio in range 1.8–2.0 with 260/230 ratio above 1.5 were used for qPCR experiments, which included approximately 95% of samples.

2.7 Quantitative Polymerase Chain Reaction (qPCR)

Quantification of parasites in whole blood, spleen and from blood-fed flies was performed by real-time Polymerase Chain Reaction (qPCR). TaqMan based qPCR on each DNA sample was run in triplicate on an Applied Biosystems (ABI) 7500 Real Time PCR system (Thermo Fisher Scientific, USA) to amplify a L. donovani kinetoplast minicircle DNA target with forward (kDNA4GGGTGCAGAAATCCCGTTCA), reverse primer (kDNA4 CCCGGCCCTATTTTACACCA) and probe (ACCCCCAGTTTCCCGCCCCG) [47]. Nuclease free water (Thermo Fisher Scientific, USA) and blood DNA from Non-endemic healthy control (NEHC) and DNA from pooled uninfected laboratory reared P. argentipes were used as negative controls. Quantification of parasite equivalents in the test samples were calculated with a specific set of standard samples (DNA from healthy human blood and uninfected sand flies spiked with serial dilution of cultured Leishmania parasites) run in parallel to each set of test samples, as previously described [47,48]. qPCR cutoff Ct value for blood/tissue was ≤ 35. For sand flies, an approximate Ct >30 was considered negative [49].

2.8 Serology

For measurement of antibodies in serum against L. donovani rk-39 antigen, 25ng/well of rK39 antigen (Infectious Disease Research Institute (IDRI), Seattle, USA) was coated to 96-well flat-bottom microtiter plates in 100μL coating buffer (0.1 M carbonate-bicarbonate buffer, pH 9.6) and incubated overnight at 4°C as described by elsewhere [42,50,51]. After two hours of incubation, the plates were blocked with 150μL blocking buffer (1% BSA in 0.05 M phosphate buffer) at 25°C. One hundred microliter of serum samples (1:200 dilution) were added to the plates and incubated at 25°C for 30 minutes. The plates were washed with phosphate-buffered saline (PBS) containing 0.1% Tween-20 (pH 7.4) and incubated with 100μL peroxidase-conjugated Goat Anti-Bovine IgG (Invitrogen, Cat No. A18751) (1:32000 dilutions) for cow/buffalo, Donkey Anti-Goat IgG (Invitrogen, Cat No. A15999) (1:2000 dilutions) for goat and Goat Anti-Rat IgG (Merck, Cat No. AP136P) (1:5000 dilutions) for rat at 25°C for 30 minutes. Plates were then rinsed four times and incubated with 100μL TMB substrate for 5 minutes in the dark. The reaction was stopped using 50 μL of 0.1 N H2SO4 and optical density (OD) was measured at 450 nm. Each sample was assayed in duplicate. Non-endemic region (no VL cases reported in the last 15 years) animals’ serum was used as negative controls. rK39 Rapid Diagnostic Test (RDT) (InBios, Seattle, USA) were also done on all serum samples according to the manufacturer’s instruction.

2.9 Statistical analysis

Cut-off values for seroprevalence were determined by adding two standard deviations to the mean optical density (OD) of the control sera from non-endemic areas. The prevalence of infection by Leishmania parasites was estimated based on the host species and the diagnostic method used. The total PCR positivity and seroprevalence were compared according to the animal group used in this study. Statistical analyses were performed using Graph Pad Prism software version 8 for all analyses.

3. Results

3.1 The low positivity for qPCR in livestock

Blood samples were collected from 255 livestock (85 cows, 66 buffalo and 39 goats) and rodents (51 rat, 11 shrew and 3 voles) in endemic villages. Antibodies against L. donovani rK39 were detected in 10.58% (27 out of 255) serum samples while Leishmania DNA was found in 2 buffalo and 1 goat: 1.17% (3 out of 255) of these mammals (Table 1). No any qPCR positive livestock were found to have seropositive. None of the splenic biopsies of rodents were found positive for leishmania kDNA qPCR. Anti-Leishmania antibodies were detected only in 2.35% cow (2/85) and 3.03% buffalo (2/66) out of total 255 mammals (1.56%) via rK39 RDT.

Table 1. L. donovani exposure and infection status for domestic and peri-domestic mammals as measured by rk39 ELISA and qPCR from serum and blood samples, respectively, from Muzaffarpur, Bihar, India.

Animals rk39 ELISA (animal +/ total, n/%) Blood qPCR (animal +/ total)
Cows 10/85 (11.76%) 0/85 (0%)
Buffalo 8/66 (12.12%) 2/66 (3.03%)
Goats 4/39 (10.25%) 1/39 (2.56%)
Rodents 5/65 (7.69%) 0/65 (0%)
Total 27/255 (10.58%) 3/255 (1.17%)

None of the rk39 RDT positive mammals were found positive for qPCR or rk39 ELISA. Endemic villages goat sera had significantly higher (p = 0.0002) OD than non-endemic goat rk39 ELISA average OD, indicating demonstrable exposure to L. donovani rk39 antigen in this group of animals (Fig 3). No statistical difference was observed when comparing seropositive cattle average OD to other mammal group (goats and rodent) with lower seroreactivity to L. donovani antigen.

Fig 3. Reactivity of cow, buffalo, goat and rodent sera from non-endemic locations (NE) and endemic villages (E) of Muzaffarpur for presence of anti L. donovani antibodies in rk39 ELISA.

Fig 3

Line indicates threshold to be considered seropositive based on mean OD of NE group + 2 standard deviations.

3.2 Livestock and rodents are not infectious to sand fly via xenodiagnosis

We conducted xenodiagnosis to evaluate host-to-vector transmissibility and determine host infectiousness in endemic villages between 2018 and 2021. A total of 255 animals were enrolled, 192 animals (78.4%) had xenodiagnosis performed (Table 2). Infection status was not known at the time of xenodiagnosis. In total, 4,993 laboratory reared female sand flies were exposed to these mammals. This included two buffalo and one goat that had qPCR detectable parasitemia, among 17 seropositive mammals (8.85%, 17/192). Despite this substantial sample size, no (0/4993) sand flies fed on these mammals were qPCR positive for Leishmania DNA.

Table 2. Limited to no infectiousness observed from domestic animals via single blood-fed P. argentipes qPCR after xenodiagnosis.

# Animals % Successful feeding qPCR sand fly positive* animals +/tot (flies +/tot)
Cows 47 47/47 (100%) 0/47 (0/1636)
Buffalo 41 41/41 (100%) 0/41 (0/1674)
Goats 39 39/39 (100%) 0/39 (0/1108)
Rodents 65 42/65 (65%) 0/42 (0/575)

4. Discussion

Many investigations have been carried out in East Africa and the ISC to find wild and/or domestic reservoir hosts of human VL. This study is the first investigation to confirm Leishmania infection occurring in livestock and rodents in a VL endemic area of India with the relationship of that infection to transmission to P. argentipes vector using xenodiagnosis. The host-targeted surveillance data, including tracking infection in sand flies and non-human favored blood meal sources of sand flies, and timeliness of responses to these data, are essential to monitor and sustain elimination by molecular and serological evidence of infection. The National Guidelines in India require a combination of human clinical symptoms and a positive serological and/or parasitological test to diagnose VL [5]. The most widely used diagnostic test in the ISC, the rK39 RDT, can only differentiate between active disease and asymptomatic infection in strict combination with clinical criteria [52] while qPCR positive or high rk39 ELISA titer shows very strong association to progression of VL [51]. Domestic livestock have also found to be Leishmania infected by other PCR and serological surveys in endemic villages of Bangladesh and Nepal at a higher prevalence than was found in Muzaffarpur by the current study [17,24]. Leishmania prevalence in different endemic areas is dependent on variable sand fly infection rates and distribution, which are influenced by numerous macro- and micro-environmental factors [53].

Even though there is active transmission of VL in the investigated region of Bihar, the epidemiology of infection in these mammals are still undocumented. To screen for the prevalence of anti-Leishmania antibodies in livestock and rodents, we performed the ELISA and the rk39 RDT tests. Anti-Leishmania antibodies are a strong indication of exposure to infection by the parasite. A relatively high seroprevalence (11.92%, 18/151) in livestock (cow and buffalo) suggests this group is particularly exposed to L. donovani. Several livestock had a relatively strong antibody response, which could indicate sequential exposure to Leishmania parasites as a result of infected sand fly bites or that symptomatic infection occurred (Fig 1) [54]. Typically, these livestock (cows, buffaloes, and goats) are maintained in the communities and are usually in close proximity to the human inhabitants. P. argentipes prefers to feed on livestock and breeds primarily in cattle sheds. However, this vector also will feed on humans when in proximity [5557]. This survey’s finding of anti-L donovani antibodies in cow and buffalo serum, as detected by ELISA, is consistent with findings of prior studies conducted in Sudan [28], Bangladesh [24] and Nepal [17]. Anti-Leishmania antibodies were also discovered in domestic pigs in Brazil, however pigs were shown to be resistant to Leishmania infection, which may also occur in livestock explaining the discordance between seropositivity and PCR positivity rates [58]. It is also possible that the antibody response measured in livestock and rodents serum is due to cross-reacting antibodies inferred from other pathogens, which have been reported in human populations [59].

If parasites were unable to proliferate or survive within a given host, parasite DNA would be absent when using molecular diagnostic techniques. After peak transmission season, Leishmania parasites DNA were found in domestic mammals such as goats, cows, and buffaloes in Nepal [17]. We found evidence of Leishmania DNA only in two buffalo (2/66) and one goat (1/39). A positive PCR result likely indicated current or recent infection as DNA remains in the body for a short period of time [60] and infections may persist for several months during the highest peak of sand fly activity and Leishmania transmission season (May-June). It is believed that L. donovani is primarily transmitted between humans (anthroponotic), as opposed to genetically similar, zoonotic L. infantum, which is predominantly maintained in canine reservoirs [45,61]. Although this study detected L. donovani seropositivity in domestic mammals from endemic villages, these animals were not infectious to colony reared P. argentipes via xenodiagnosis. Detection of PCR-positive animals does not imply that these animal act as parasite reservoirs for sand flies. Instead, such species may act as parasite sinks, rather than contributing to the Leishmania infection cycle [6264].

The normal Leishmania life cycle within the sand fly takes ~8–10 days to reach stationary phase growth [65]. It is possible that with better resources to extend the time post-xenodiagnosis for additional parasite replication to occur, Leishmania parasites may be detectable in sand flies fed on exposed livestock and rodents. However, qPCR is able to determine lower parasite loads and reliably quantify Leishmania from sand flies. Multiple works focused on evaluating parasite burden in sand flies used qPCR with primers targeting kDNA with high sensitivity and accuracy [61,6668]. In general, absence or low quantity of parasites in peripheral blood or skin might explain failure of infectivity to sand flies. It has been reported that high parasite loads in the skin and blood of humans and dogs infected with L. donovani and L. infantum respectively were most correlated with infectiousness to sand fly vectors via xenodiagnosis [42,44,46,61,69]. As leishmaniasis is dermotrophic in nature it is important to evaluate skin parasite burden in transmission studies. The mammals included in this study (livestock) are culturally valuable, with cows specifically being sacred within Hindu religious practice in India. As such, it was not possible to get skin samples from livestock to evaluate parasite burden from these tissues.

The objective of this study was to assess the role of livestock and rodents in endemic areas for transmission of L. donovani, particularly considering the role of proximity and livestock density in altering human Leishmania incidence. Livestock are an important part of households in the endemic settings on the ISC. Other animals, particularly dogs, have been demonstrated to be key reservoir species for the zoonotic transmission cycle of other visceralizing Leishmania parasites in other parts of the world. Additional studies are needed to establish the role of dogs in L. donovani transmission in endemic villages in Bihar, including xenodiagnosis. From this study and others, we conclude peri-domestic mammals, particularly livestock, were exposed to L. donovani parasites in endemic villages of Bihar. However, detectable parasitemia was rare. This leads us to conclude that there is a limited role for these mammals in transmission of L. donovani to humans. Given the propensity of sand flies to feed on domestic mammals, infection among livestock should continue to be monitored during outbreaks as sentinels and potential parasite sources.

Acknowledgments

We acknowledge Mr. Anil Sharma and all the field staff at the KAMRC for administrative and logistical support. We also thank the friendly residents of the study villages and animal owners/caretakers without whose willing and outstanding cooperation this effort would have been impossible.

Data Availability

All relevant data are within the manuscript.

Funding Statement

This work was supported by the Extramural Program of the National Institute of Allergy and Infectious Diseases, National Institutes of Health (NIH TMRC U19AI074321 to SS). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

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PLoS Negl Trop Dis. doi: 10.1371/journal.pntd.0010347.r001

Decision Letter 0

Joachim Clos, Shan Lv

10 May 2022

Dear Dr. Petersen,

Thank you very much for submitting your manuscript "Domestic Mammals as potential Reservoir Hosts for Leishmania donovani in India" for consideration at PLOS Neglected Tropical Diseases. As with all papers reviewed by the journal, your manuscript was reviewed by members of the editorial board and by several independent reviewers. In light of the reviews (below this email), we would like to invite the resubmission of a significantly-revised version that takes into account the reviewers' comments.

Dear colleagues,

thank you for your submission. The manuscript was assessed by three expert reviewers who concur in there assessment that the paper, whilst of high interest to the field, needs a major revision along the lines suggested by the reviewers. I therefore ask you to revise the manuscript to meet the criteria and suggestions by the reviewers. Thank you in advance!

Joachim Clos

We cannot make any decision about publication until we have seen the revised manuscript and your response to the reviewers' comments. Your revised manuscript is also likely to be sent to reviewers for further evaluation.

When you are ready to resubmit, please upload the following:

[1] A letter containing a detailed list of your responses to the review comments and a description of the changes you have made in the manuscript. Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out.

[2] Two versions of the revised manuscript: one with either highlights or tracked changes denoting where the text has been changed; the other a clean version (uploaded as the manuscript file).

Important additional instructions are given below your reviewer comments.

Please prepare and submit your revised manuscript within 60 days. If you anticipate any delay, please let us know the expected resubmission date by replying to this email. Please note that revised manuscripts received after the 60-day due date may require evaluation and peer review similar to newly submitted manuscripts.

Thank you again for your submission. We hope that our editorial process has been constructive so far, and we welcome your feedback at any time. Please don't hesitate to contact us if you have any questions or comments.

Sincerely,

Joachim Clos

Associate Editor

PLOS Neglected Tropical Diseases

Shan Lv

Deputy Editor

PLOS Neglected Tropical Diseases

***********************

Dear colleagues,

thank you for your submission. The manuscript was assessed by three expert reviewers who concur in there assessment that the paper, whilst of high interest to the field, needs a major revision along the lines suggested by the reviewers. I therefore ask you to revise the manuscript to meet the criteria and suggestions by the reviewers. Thank you in advance!

Joachim Clos

Reviewer's Responses to Questions

Key Review Criteria Required for Acceptance?

As you describe the new analyses required for acceptance, please consider the following:

Methods

-Are the objectives of the study clearly articulated with a clear testable hypothesis stated?

-Is the study design appropriate to address the stated objectives?

-Is the population clearly described and appropriate for the hypothesis being tested?

-Is the sample size sufficient to ensure adequate power to address the hypothesis being tested?

-Were correct statistical analysis used to support conclusions?

-Are there concerns about ethical or regulatory requirements being met?

Reviewer #1: Objectives are clearly stated.

The Study design does not allow testing infectiousness, and this is acknowledged by the authors in the discussion.

The study population is clearly described, but not the rationale for the sample size. Therefore it is not possible to assess whether the selected sample size allows enough power to address the hypothesis.

No concerns regarding ethical issues.

Reviewer #2: The authors should indicate in the methods how they decided on the number of sandflies for xenodiagnosis, and show that the number they used per animal species or group is sufficient to detect Leishmania infection, based on other xenodiagnosis studies.

See other and specific comments on the general comments.

Reviewer #3: (No Response)

--------------------

Results

-Does the analysis presented match the analysis plan?

-Are the results clearly and completely presented?

-Are the figures (Tables, Images) of sufficient quality for clarity?

Reviewer #1: The results reflect the planned analysis and are clearly presented.

Reviewer #2: Results presented on tables are not mentioned in the text, and some results are only mentioned in the Discussion.

See other and specific comments on the general comments.

Reviewer #3: (No Response)

--------------------

Conclusions

-Are the conclusions supported by the data presented?

-Are the limitations of analysis clearly described?

-Do the authors discuss how these data can be helpful to advance our understanding of the topic under study?

-Is public health relevance addressed?

Reviewer #1: The conclusions reflect the data obtained. And some limitations are stated. It is missed a proposed plan for similar analyses/studies in the future.

Reviewer #2: Discussion of the limitations should be improved. The conclusions rest on the capacity of the xenodiagnosis to detect transmission with the sample size used, which needs to be demonstrated.

See other and specific comments on the general comments.

Reviewer #3: (No Response)

--------------------

Editorial and Data Presentation Modifications?

Use this section for editorial suggestions as well as relatively minor modifications of existing data that would enhance clarity. If the only modifications needed are minor and/or editorial, you may wish to recommend “Minor Revision” or “Accept”.

Reviewer #1: Fine here.

Reviewer #2: See general comments.

Reviewer #3: (No Response)

--------------------

Summary and General Comments

Use this section to provide overall comments, discuss strengths/weaknesses of the study, novelty, significance, general execution and scholarship. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. If requesting major revision, please articulate the new experiments that are needed.

Reviewer #1: A great progress has been made on the Indian sub continent (ISC) to reach the targets set for visceral leishmaniasis (VL) in the WHO Road Map for NTDs, 2012-2020, i.e. Bangladesh, India and Nepal achieving elimination as a public health problem (<1 case/10 000 population, district or subdistrict level in endemic area). Pending validation, this target has been achieved by Bangladesh and Nepal, while India is very close (92%). In the new WHO Road Map for NTDs, 2021-2030 it is expected that the target will be reached by 2023.

With this situation, activities like the one proposed by the authors are key in order to assess that no residual foci of transmission remain that can revert the current situation in case control efforts are relaxed.

The study presented is pertinent and activities like this should be implemented across the ISC in order to gain understanding on the possibility of a zoonotic/anthropozoonotic cycle for Leishmania donovani.

There are however some points that in my opinión should be addressed/detailed in the manuscript in order to make this activity an example going forward and for others:

1) Xenodiagnosis, as it has been done, provides very little information. To assess infectivity to sand flies and the possibility of transmission of the parasites to another host, the screening for Leishmania parasites should have been conducted after blood meal digestion and defecation, which is beyond 48h. And ideally, infection should be confirmed by microscopy and observation of Leishmania parasites after dissecting the sandfly.

2) Why the animals (livestock) were selected based on 'owner report of illness'? Why not including asymptomatic animals?

3) Selection of animals, what is the total (estimated) number of each of the species selected in the different subdistricts or sampling units? This figure provides the ecological context. Dogs were not included, despite being reservoirs for different Leishmania species, why?

4) Preparation of sand flies: what is the rationale for selecting 30-35 female Phlebotomus argentipes and no more or less? Authors could refer to other xenodiagnosis studies using 'hosts' for which infection has been confirmed. Even in these cases the infectivity is low. Therefore, are 35 sand flies enough to test infectiousness of the selected animals?

5) Statistical analysis. There is no mention to the rationale for selecting the number of animals and sandflies used in the study.

6) Going forward, would the authors propose the same workflow? Would not be better to test for exposure (e.g. serology, PCR) and then conduct xenodiagnosis on seropositive or PCR positive animals?

7) Was it possible to get skin samples from the animals and test these for PCR? Would this be a better sample if one aims to assess their capacity as reservoirs?

Reviewer #2: 1. Lines 101-103: The authors should also refer to the L. donovani foci in Africa, as closely related to the ISC L. donovani, and the suspected reservoir hosts.

2. Section 1.1.: it would be interesting if the authors indicated the vector control measures in the studied areas, if any, and if known.

3. Line 144: what is an m-tube vial? Explain or use manufacturer name.

4. Line 151: This should be in section 1.5. In any case, the “poor condition” should be explained.

5. Line 152: Indicate how the rats were euthanized.

6. Lines 160-161: Explain why this number of sandfly females per animal. Is this enough to detect infection? What are the references for this?

7. Line 162: Was the xenodiagnosis repeated throughout the year on rodents as well, or just livestock? If also on rodents, provide more detail.

8. Lines 163-164: Explain to the non-expert reader why female sandflies were kept for 48 hours post-feeding.

9. Line 166: Indicate at what temperature the samples were kept.

10. Section 1.7.: The reference for the qPCR (ref. 44?) should be given from the first sentence and, certainly, for the primers used.

11. Section 1.8.: A reference must be given to the rk39 ELISA, and it should be stated the origin or preparation of the rk39 antigen used. Furthermore, at the end of the section, it is stated that rK39 rapid tests were conducted, so the title of the section should be changed accordingly, and the authors should clarify if the ELISA and the rapid tests were done to all samples, and if not, to which samples and the selection algorithm.

12. Lines 220-226: This belongs in the Introduction or the Discussion.

13. Lines 225-226: Techniques, rather than technique. Indicate clearly if they are recommended together, or if only one is enough (“qPCR or rk39 ELISA”). In addition, qPCR is only meaningful together with the amplified target (or primers), so it should be indicated which qPCR is specifically recommended (with reference).

14. Lines 226 and 228: “domestic animals” is not the best description for the sampled animals. It should be better “livestock and rodents”.

15. Line 228: Exposure is how the results are interpreted. Here, the authors should simply indicate the percentage of animals with a positive serology result.

16. Lines 228-233: There is no need to repeat all the results presented on Table 1. Plus, the values are in Table 1 and not Figure 3, as indicated, which shows the distribution of OD values.

17. Line 239: Here should be the reference to Figure 3.

18. Section 2.1.: It should be mentioned in the text the low positivity results for qPCR.

19. Figure 3, Legend: it should be indicated that the test was an ELISA and what NE and E means.

20. Lines 246-248: should be summarized to indicate that the authors have conducted xenodiagnosis to “quantify host-to-vector transmissibility and determining infectiousness of hosts” in endemic areas…

21. Line 260: species name in italics.

22. Lines 263-265: Both results should have been mentioned earlier in the Results.

23. Ensure consistency, throughout, regarding the use of RDT (Methods) and ICT dipstick test (Discussion). The same name or abbreviation should be used for the same test as from the first mention.

24. Also ensure consistency regarding the nomenclature for the animals: domestic animals, domestic cattle, livestock…

25. The Discussion should mention dogs, and their possible role or not in transmission in the ISC, as a complement to the animals surveyed in this work.

26. The Discussion should compare these results with those obtained with other xenodiagnostic surveys of known Leishmania hosts, to evaluate how likely it would be to detect infected sandflies for each animal species surveyed, or demonstrate that the sample size for each animal species was adequate to detect infection.

27. The Discussion should be more explicit about the limitations of the work.

Reviewer #3: (No Response)

--------------------

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Reviewer #1: No

Reviewer #2: No

Reviewer #3: No

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Attachment

Submitted filename: Comments-Reviewer.docx

PLoS Negl Trop Dis. doi: 10.1371/journal.pntd.0010347.r003

Decision Letter 1

Joachim Clos, Shan Lv

11 Aug 2022

Dear Dr Petersen,

Thank you very much for submitting your manuscript "Livestock and rodents within an endemic focus of Visceral Leishmaniasis are not reservoir hosts for Leishmania donovani" for consideration at PLOS Neglected Tropical Diseases. As with all papers reviewed by the journal, your manuscript was reviewed by members of the editorial board and by several independent reviewers. The reviewers appreciated the attention to an important topic. Based on the reviews, we are likely to accept this manuscript for publication, providing that you modify the manuscript according to the review recommendations.

Please prepare and submit your revised manuscript within 30 days. If you anticipate any delay, please let us know the expected resubmission date by replying to this email.

When you are ready to resubmit, please upload the following:

[1] A letter containing a detailed list of your responses to all review comments, and a description of the changes you have made in the manuscript.

Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out

[2] Two versions of the revised manuscript: one with either highlights or tracked changes denoting where the text has been changed; the other a clean version (uploaded as the manuscript file).

Important additional instructions are given below your reviewer comments.

Thank you again for your submission to our journal. We hope that our editorial process has been constructive so far, and we welcome your feedback at any time. Please don't hesitate to contact us if you have any questions or comments.

Sincerely,

Joachim Clos

Academic Editor

PLOS Neglected Tropical Diseases

Shan Lv

Section Editor

PLOS Neglected Tropical Diseases

***********************

Dear colleagues,

I apologise for the delays in reaching a decision. With WorldLeish7 going on, I had problems securing a sufficient number of reviewers. I therefore have to go with the opinion of one reviewer and my own assessment. I ask you to address the points raised by Reviewer 2. In your response, please refer to page and line numbers where you addressed the questions and suggestions.

I look forward to seeing the second revision.

Reviewer's Responses to Questions

Key Review Criteria Required for Acceptance?

As you describe the new analyses required for acceptance, please consider the following:

Methods

-Are the objectives of the study clearly articulated with a clear testable hypothesis stated?

-Is the study design appropriate to address the stated objectives?

-Is the population clearly described and appropriate for the hypothesis being tested?

-Is the sample size sufficient to ensure adequate power to address the hypothesis being tested?

-Were correct statistical analysis used to support conclusions?

-Are there concerns about ethical or regulatory requirements being met?

Reviewer #2: See: Summary and General Comments

--------------------

Results

-Does the analysis presented match the analysis plan?

-Are the results clearly and completely presented?

-Are the figures (Tables, Images) of sufficient quality for clarity?

Reviewer #2: See: Summary and General Comments

--------------------

Conclusions

-Are the conclusions supported by the data presented?

-Are the limitations of analysis clearly described?

-Do the authors discuss how these data can be helpful to advance our understanding of the topic under study?

-Is public health relevance addressed?

Reviewer #2: See: Summary and General Comment

--------------------

Editorial and Data Presentation Modifications?

Use this section for editorial suggestions as well as relatively minor modifications of existing data that would enhance clarity. If the only modifications needed are minor and/or editorial, you may wish to recommend “Minor Revision” or “Accept”.

Reviewer #2: Overall, there is too much repetition throughout the manuscript of information provided in previous sections. The manuscript should be cleaned up of this excess information.

Grammar issues (this is not an exhaustive list).

1. Line 39 – delete “but”

2. Line 55 – L. instead of Leishmania

3. Line 73 – add a comma after species.

4. Line 78 – add a comma after infantum.

5. Line 79 – add a semi-colon after America.

6. Line 81 – add “and” before “roughly”.

7. Lines 89 to 90 – This sentence requires a verb, or it should be added as a complement to the previous or the following sentence.

8. Line 95 – numbers rather than “counts”, which implies an action of counting.

9. Line 107 – “of” rather than “on”

10. Line 164 – “Depending” instead of “depends”

11. Line 212 – “elsewhere” instead of “by several findings”

12. Line 213 – Sentences should not start by a numeral, so 100 should be “One hundred…”

13. Line 236 – “Leishmania”.

--------------------

Summary and General Comments

Use this section to provide overall comments, discuss strengths/weaknesses of the study, novelty, significance, general execution and scholarship. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. If requesting major revision, please articulate the new experiments that are needed.

Reviewer #2: The authors have addressed many issues by the reviewers, but not all were completely integrated in the revised manuscript, or I was not able to identify where. Ensure that in the new response to reviewers includes the new or revised text and where the previous and new issues were addressed in the manuscript.

Major issues

1. Despite the large number of sandflies used for xenodiagnosis, only 3 mammals had detectable Leishmania DNA, and it is not clear in the manuscript if these animals were included in the xenodiagnosis. Even if all seropositive mammals were infected, it is not given the percentage of the 192 animals that were seropositive, and it would be only 14% of all animals.

2. The authors do not mention the estimated sensitivity of xenodiagnosis, and they should, but it would make more sense to concentrate the xenodiagnosis effort on animals with more likely L. donovani infection (high rk39 titre or positive qPCR), in terms of number of sandflies, but to conduct xenodiagnosis at different times during the day or along a week, for example. It is understandable if the authors have done the xenodiagnosis without prior knowledge of the infection status of the animals, but this should be discussed as a limitation of this work.

3. The authors provide quite a lot of the information asked by reviewers in reply to reviewers, but not enough in the manuscript for many issues, including selection of mammals for xenodiagnosis, or the use of skin samples, which should be included in the discussion. Review throughout questions and answers to reviewers.

4. Given that the authors have first conducted xenodiagnosis and only after detection of infection, the Results should reflect this order, including data that shows an estimation of how many animals subjected to xenodiagnosis were likely infected.

5. In my opinion, the authors have not addressed the question by all three reviewers regarding dogs as possible reservoirs of L. donovani in the ISC (or not), considering their role elsewhere, including Sudan, where L. donovani is also present, and the reasons why dogs were not included here.

Minor issues:

1. Line 61 – indicate that Ph. argentipes is the vector of L. donovani in India, to explain why this species was used, either here or elsewhere in the Author Summary.

2. Line 66 – indicate which population. Domestic animals?

3. Lines 74 to 75 – “…and notable prevalence of Leishmania in more than 98 countries and territories” – a verb seems to be missing and this part of the sentence doesn’t follow well from the initial part, which refers to L. donovani, but the 98 countries are for any species that cause leishmaniasis in humans. This should rather follow or add to the first sentence of the Introduction.

4. Line 86 – Given that leishmaniasis is a vector-borne disease, the mammal host isn’t considered infectious. It is better to use “reservoir” here. The expression “that promote transmission” is not accurate either, as vectors actively seek to feed on mammals (infected or not). Finally, “to others” is not clear enough. Simply state that in other regions both humans and dogs are reservoirs unlike in India, or that are sources of infection to vectors.

5. Line 92 – define what “normal” is intended to mean in this sentence, or replace with a more adequate word. Does it refer to number of cases in relation to those recorded in previous years? Or does it refer to the actual number of cases during the outbreak?

6. Lines 147 to 148 – Show calculations or indicate calculator used in the manuscript.

7. Line 155 – indicate model and manufacturer of traps.

8. Line 156 – define proximity in distance range.

9. Lines 157 to 161 – it is only mentioned that blood was taken from rats, and that they were euthanized. Indicate what happened to the shrews and the voles here, rather than in section 1.5. (lines 174-176), for clarity.

10. Lines 166 to 169 – This sentence is somewhat confusing. I think the issue is the placement of commas to indicate separate sections. I suggest: “… to limit the number of female P. argentipes per meal to 30-35, plus 10 males, and expose two feeding cups (…). The females used were three to five-day old (mature) and 12-hour starved.”

11. Lines 171 to 172, which indicate 30-35 flies, seem to contradict lines 166 to 169, which state 60-70 flies.

12. Line 181 – “ethanol” rather than “alcohol”, unless another alcohol was used, but then specify which.

13. Line 184 – indicate the weight or volume used of the biological material for DNA extraction.

14. Lines 186 to 187 – What is this precipitation time? As far as I’m aware there is no precipitation step using the QIAmp kits, unless to determine DNA length. If that was the case, explain that this was done, but also indicate what was the time used, not just “increased”.

15. Section 1.6. Indicate if the elution volume and eluent was the same for both kits, and if the quality assessment was also done for both methods of DNA extraction. If not, ensure that the method description is equally complete for both methods.

16. Line 209 – add “L. donovani” before rk-39.

17. Section 1.8 – Volumes for all ELISA components should be given, not just of the sample serum.

18. Line 235 – indicate how many of each livestock and rodents.

19. Line 237 – indicate in which groups of mammals Leishmania DNA was found.

20. Line 237 – indicate if qPCR positive animals were also rk39 ELISA positive or not.

21. Line 239 – indicate %s for each group as well.

22. Lines 243 to 250 – indicate that the comparison is between rk39 ELISA average OD, presumably, or what was compared. Also provide the values under comparison.

23. Figure 3 – it would make more sense to have the groups of animals in the same order as Table 1.

24. Lines 250 to 252 – Please clarify is sentence. Is the comparison between seropositive and seronegative cattle? Or are “other animals” other groups? In any case, it’s not clear what is being compared. Is it average OD?

25. Lines 256 – how were the 192 animals selected? What were the criteria used? – it should be explained in Materials and Methods. Were the three mammals with detectable Leishmania DNA included in the xenodiagnosis?

--------------------

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If you choose “no”, your identity will remain anonymous but your review may still be made public.

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Reviewer #2: No

Figure Files:

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org.

Data Requirements:

Please note that, as a condition of publication, PLOS' data policy requires that you make available all data used to draw the conclusions outlined in your manuscript. Data must be deposited in an appropriate repository, included within the body of the manuscript, or uploaded as supporting information. This includes all numerical values that were used to generate graphs, histograms etc.. For an example see here: http://www.plosbiology.org/article/info%3Adoi%2F10.1371%2Fjournal.pbio.1001908#s5.

Reproducibility:

To enhance the reproducibility of your results, we recommend that you deposit your laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. Additionally, PLOS ONE offers an option to publish peer-reviewed clinical study protocols. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols

References

Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article's retracted status in the References list and also include a citation and full reference for the retraction notice.

PLoS Negl Trop Dis. doi: 10.1371/journal.pntd.0010347.r005

Decision Letter 2

Shan Lv

12 Oct 2022

Dear Dr. Petersen,

We are pleased to inform you that your manuscript 'Livestock and rodents within an endemic focus of Visceral Leishmaniasis are not reservoir hosts for Leishmania donovani' has been provisionally accepted for publication in PLOS Neglected Tropical Diseases.

We would like to ask that you please correct the following sentence in the introduction, on page 4: "In addition, a zoonotic cycle of L. tropica transmitted by P. (Par) sergenti might also be present" to ". . . a zoonotic cycle of L. tropica transmitted by P. (Par) sergenti is also present," as there is no doubt about this and there are zoonotic cycles that are the primary mode of parasite circulation in several foci in the Middle East.

Before your manuscript can be formally accepted you will also need to complete some formatting changes, which you will receive in a follow up email. A member of our team will be in touch with a set of requests.

Please note that your manuscript will not be scheduled for publication until you have made the required changes, so a swift response is appreciated.

IMPORTANT: The editorial review process is now complete. PLOS will only permit corrections to spelling, formatting or significant scientific errors from this point onwards. Requests for major changes, or any which affect the scientific understanding of your work, will cause delays to the publication date of your manuscript.

Should you, your institution's press office or the journal office choose to press release your paper, you will automatically be opted out of early publication. We ask that you notify us now if you or your institution is planning to press release the article. All press must be co-ordinated with PLOS.

Thank you again for supporting Open Access publishing; we are looking forward to publishing your work in PLOS Neglected Tropical Diseases.

Best regards,

Shan Lv, Ph.D.

Section Editor

PLOS Neglected Tropical Diseases

***********************************************************

Reviewer's Responses to Questions

Key Review Criteria Required for Acceptance?

As you describe the new analyses required for acceptance, please consider the following:

Methods

-Are the objectives of the study clearly articulated with a clear testable hypothesis stated?

-Is the study design appropriate to address the stated objectives?

-Is the population clearly described and appropriate for the hypothesis being tested?

-Is the sample size sufficient to ensure adequate power to address the hypothesis being tested?

-Were correct statistical analysis used to support conclusions?

-Are there concerns about ethical or regulatory requirements being met?

Reviewer #2: (No Response)

**********

Results

-Does the analysis presented match the analysis plan?

-Are the results clearly and completely presented?

-Are the figures (Tables, Images) of sufficient quality for clarity?

Reviewer #2: (No Response)

**********

Conclusions

-Are the conclusions supported by the data presented?

-Are the limitations of analysis clearly described?

-Do the authors discuss how these data can be helpful to advance our understanding of the topic under study?

-Is public health relevance addressed?

Reviewer #2: (No Response)

**********

Editorial and Data Presentation Modifications?

Use this section for editorial suggestions as well as relatively minor modifications of existing data that would enhance clarity. If the only modifications needed are minor and/or editorial, you may wish to recommend “Minor Revision” or “Accept”.

Reviewer #2: (No Response)

**********

Summary and General Comments

Use this section to provide overall comments, discuss strengths/weaknesses of the study, novelty, significance, general execution and scholarship. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. If requesting major revision, please articulate the new experiments that are needed.

Reviewer #2: 1. Most of the reply to point 3 of "Major points" should be included in the Discussion and indicated in the reply where it was inserted.

2. Part of the reply to point 5 of "Major points" should be included in the Discussion and indicated in the reply where it was inserted. At the very least, indicate that dogs can be suspected reservoirs, as for other VL agents, and that they are the subject of a separate study. It should be clear to the reader that the omission of dogs from this work was not an oversight.

**********

PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #2: No

PLoS Negl Trop Dis. doi: 10.1371/journal.pntd.0010347.r006

Acceptance letter

Shan Lv

16 Oct 2022

Dear Dr. Petersen,

We are delighted to inform you that your manuscript, "Livestock and rodents within an endemic focus of Visceral Leishmaniasis are not reservoir hosts for Leishmania donovani," has been formally accepted for publication in PLOS Neglected Tropical Diseases.

We have now passed your article onto the PLOS Production Department who will complete the rest of the publication process. All authors will receive a confirmation email upon publication.

The corresponding author will soon be receiving a typeset proof for review, to ensure errors have not been introduced during production. Please review the PDF proof of your manuscript carefully, as this is the last chance to correct any scientific or type-setting errors. Please note that major changes, or those which affect the scientific understanding of the work, will likely cause delays to the publication date of your manuscript. Note: Proofs for Front Matter articles (Editorial, Viewpoint, Symposium, Review, etc...) are generated on a different schedule and may not be made available as quickly.

Soon after your final files are uploaded, the early version of your manuscript will be published online unless you opted out of this process. The date of the early version will be your article's publication date. The final article will be published to the same URL, and all versions of the paper will be accessible to readers.

Thank you again for supporting open-access publishing; we are looking forward to publishing your work in PLOS Neglected Tropical Diseases.

Best regards,

Shaden Kamhawi

co-Editor-in-Chief

PLOS Neglected Tropical Diseases

Paul Brindley

co-Editor-in-Chief

PLOS Neglected Tropical Diseases

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    Data Availability Statement

    All relevant data are within the manuscript.


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