Skip to main content
Proceedings of the National Academy of Sciences of the United States of America logoLink to Proceedings of the National Academy of Sciences of the United States of America
. 2022 Oct 28;119(44):e2203150119. doi: 10.1073/pnas.2203150119

Observing many researchers using the same data and hypothesis reveals a hidden universe of uncertainty

Nate Breznau a,2,1, Eike Mark Rinke b,2, Alexander Wuttke c,l,2, Hung H V Nguyen a,d, Muna Adem e, Jule Adriaans f, Amalia Alvarez-Benjumea g, Henrik K Andersen h, Daniel Auer c, Flavio Azevedo j, Oke Bahnsen i, Dave Balzer k, Gerrit Bauer oooo, Paul C Bauer c, Markus Baumann m,dd, Sharon Baute n, Verena Benoit l,o, Julian Bernauer c, Carl Berning pppp, Anna Berthold o, Felix S Bethke p, Thomas Biegert q, Katharina Blinzler r, Johannes N Blumenberg rrrr, Licia Bobzien s, Andrea Bohman t, Thijs Bol x,uuuu, Amie Bostic u, Zuzanna Brzozowska v,w, Katharina Burgdorf i, Kaspar Burger x,y,vvvv, Kathrin B Busch z, Juan Carlos-Castillo aa,mmmm, Nathan Chan nnnn, Pablo Christmann ssss, Roxanne Connelly cc, Christian S Czymara qqqq, Elena Damian yyyy, Alejandro Ecker c, Achim Edelmann ff, Maureen A Eger t, Simon Ellerbrock c,i, Anna Forke z, Andrea Forster pp, Chris Gaasendam ee, Konstantin Gavras i, Vernon Gayle cc, Theresa Gessler hhhh, Timo Gnambs gg, Amélie Godefroidt aaaaa, Max Grömping hh, Martin Groß ii, Stefan Gruber jj, Tobias Gummer ssss, Andreas Hadjar kk,mm,llll,rrrrr, Jan Paul Heisig iiii,mmmmm, Sebastian Hellmeier nnnnn, Stefanie Heyne c, Magdalena Hirsch ooooo, Mikael Hjerm t, Oshrat Hochman ssss, Andreas Hövermann mm,qq, Sophia Hunger ppppp, Christian Hunkler nn, Nora Huth oo, Zsófia S Ignácz qqqq, Laura Jacobs ll, Jannes Jacobsen tt,jjjj, Bastian Jaeger rr, Sebastian Jungkunz ss,lll,iiiii, Nils Jungmann r, Mathias Kauff uu, Manuel Kleinert uuu, Julia Klinger jjjjj, Jan-Philipp Kolb vv, Marta Kołczyńska ww, John Kuk xx, Katharina Kunißen k, Dafina Kurti Sinatra z, Alexander Langenkamp qqqq, Philipp M Lersch f,ddddd, Lea-Maria Löbel f, Philipp Lutscher yy, Matthias Mader zz, Joan E Madia aaa,lllll, Natalia Malancu bbb, Luis Maldonado ccc, Helge Marahrens e, Nicole Martin ddd, Paul Martinez eee, Jochen Mayerl h, Oscar J Mayorga fff, Patricia McManus e, Kyle McWagner bb, Cecil Meeusen ee, Daniel Meierrieks ooooo, Jonathan Mellon ddd, Friedolin Merhout ggg, Samuel Merk hhh, Daniel Meyer kkkkk, Leticia Micheli iii, Jonathan Mijs jjj, Cristóbal Moya kkk, Marcel Neunhoeffer i, Daniel Nüst hhhhh, Olav Nygård mmm, Fabian Ochsenfeld nnn, Gunnar Otte k, Anna O Pechenkina ooo, Christopher Prosser ppp, Louis Raes fffff, Kevin Ralston cc, Miguel R Ramos qqq, Arne Roets rrr, Jonathan Rogers sss, Guido Ropers i, Robin Samuel kk,rrrrr, Gregor Sand jj, Ariela Schachter ttt, Merlin Schaeffer qqqqq, David Schieferdecker xxxx, Elmar Schlueter uuu, Regine Schmidt o, Katja M Schmidt f, Alexander Schmidt-Catran qqqq, Claudia Schmiedeberg oooo, Jürgen Schneider ccccc, Martijn Schoonvelde vvv,sssss, Julia Schulte-Cloos kkkk, Sandy Schumann wwww, Reinhard Schunck oo, Jürgen Schupp f, Julian Seuring bbbbb, Henning Silber tttt, Willem Sleegers rr, Nico Sonntag k, Alexander Staudt z, Nadia Steiber www, Nils Steiner pppp, Sebastian Sternberg z, Dieter Stiers zzzz, Dragana Stojmenovska uuuu, Nora Storz xxx, Erich Striessnig ttttt, Anne-Kathrin Stroppe r, Janna Teltemann yyy, Andrey Tibajev mmm, Brian Tung ttt, Giacomo Vagni x, Jasper Van Assche rrr,eeeee, Meta van der Linden xxx, Jolanda van der Noll zzz, Arno Van Hootegem ee, Stefan Vogtenhuber uuuuu, Bogdan Voicu aaaa,bbbb, Fieke Wagemans vvvvv,cccc, Nadja Wehl dddd, Hannah Werner zzzz, Brenton M Wiernik eeee, Fabian Winter g, Christof Wolf c,i,wwwww, Yuki Yamada ffff, Nan Zhang c, Conrad Ziller ss,ggggg, Stefan Zins gggg, Tomasz Żółtak ww
PMCID: PMC9636921  PMID: 36306328

Significance

Will different researchers converge on similar findings when analyzing the same data? Seventy-three independent research teams used identical cross-country survey data to test a prominent social science hypothesis: that more immigration will reduce public support for government provision of social policies. Instead of convergence, teams’ results varied greatly, ranging from large negative to large positive effects of immigration on social policy support. The choices made by the research teams in designing their statistical tests explain very little of this variation; a hidden universe of uncertainty remains. Considering this variation, scientists, especially those working with the complexities of human societies and behavior, should exercise humility and strive to better account for the uncertainty in their work.

Keywords: metascience, many analysts, researcher degrees of freedom, analytical flexibility, immigration and policy preferences

Abstract

This study explores how researchers’ analytical choices affect the reliability of scientific findings. Most discussions of reliability problems in science focus on systematic biases. We broaden the lens to emphasize the idiosyncrasy of conscious and unconscious decisions that researchers make during data analysis. We coordinated 161 researchers in 73 research teams and observed their research decisions as they used the same data to independently test the same prominent social science hypothesis: that greater immigration reduces support for social policies among the public. In this typical case of social science research, research teams reported both widely diverging numerical findings and substantive conclusions despite identical start conditions. Researchers’ expertise, prior beliefs, and expectations barely predict the wide variation in research outcomes. More than 95% of the total variance in numerical results remains unexplained even after qualitative coding of all identifiable decisions in each team’s workflow. This reveals a universe of uncertainty that remains hidden when considering a single study in isolation. The idiosyncratic nature of how researchers’ results and conclusions varied is a previously underappreciated explanation for why many scientific hypotheses remain contested. These results call for greater epistemic humility and clarity in reporting scientific findings.


Organized scientific knowledge production involves institutionalized checks, such as editorial vetting, peer review, and methodological standards, to ensure that findings are independent of the characteristics or predispositions of any single researcher (1, 2). These procedures should generate interresearcher reliability, offering consumers of scientific findings assurance that they are not arbitrary flukes and that other researchers would generate similar findings given the same data. Recent metascience research challenges this assumption as several attempts to reproduce findings from previous studies failed (3, 4).

In response, scientists have discussed various threats to the reliability of the scientific process with a focus on biases inherent in the production of science. Pointing to both misaligned structural incentives and the cognitive tendencies of researchers (57), this bias-focused perspective argues that systematic distortions of the research process push the published literature away from truth seeking and accurate observation. This then reduces the probability that a carefully executed replication will arrive at the same findings.

Here, we argue that some roots of reliability issues in science run deeper than systematically distorted research practices. We propose that to better understand why research is often nonreplicable or lacking interresearcher reliability, we need to account for idiosyncratic variation inherent in the scientific process. Our main argument is that variability in research outcomes between researchers can occur even under rigid adherence to the scientific method, high ethical standards, and state-of-the-art approaches to maximizing reproducibility. As we report below, even well-meaning scientists provided with identical data and freed from pressures to distort results may not reliably converge in their findings because of the complexity and ambiguity inherent to the process of scientific analysis.

Variability in Research Outcomes

The scientific process confronts researchers with a multiplicity of seemingly minor, yet nontrivial, decision points, each of which may introduce variability in research outcomes. An important but underappreciated fact is that this even holds for what is often seen as the most objective step in the research process: working with the data after it has come in. Researchers can take literally millions of different paths in wrangling, analyzing, presenting, and interpreting their data. The number of choices grows exponentially with the number of cases and variables included (810).

A bias-focused perspective implicitly assumes that reducing “perverse” incentives to generate surprising and sleek results would instead lead researchers to generate valid conclusions. This may be too optimistic. While removing these barriers leads researchers away from systematically taking invalid or biased analytical paths (811), this alone does not guarantee validity and reliability. For reasons less nefarious, researchers can disperse in different directions in what Gelman and Loken call a “garden of forking paths” in analytical decision-making (8).

There are two primary explanations for variation in forking decisions. The competency hypothesis posits that researchers may make different analytical decisions because of varying levels of statistical and subject expertise that lead to different judgments as to what constitutes the “ideal” analysis in a given research situation. The confirmation bias hypothesis holds that researchers may make reliably different analytical choices because of differences in preexisting beliefs and attitudes, which may lead to justification of analytical approaches favoring certain outcomes post hoc. However, many other covert or idiosyncratic influences, large and small, may also lead to unreliable and unexplainable variation in analytical decision pathways (10). Sometimes even the tiniest of these differences may add up and interact to produce widely varying outcomes.

There is growing awareness of the dependence of findings on statistical modeling decisions and the importance of analytical robustness (9, 1113). However, only recently scientists began to assess whether researcher variability affects scientific outcomes in reality, sometimes employing “many analysts” approaches where many researchers or teams independently test the same hypothesis with the same data. The first such study showed that when 29 researchers tested if soccer referees were biased toward darker-skin players using the same data, they reported 29 unique model specifications, with empirical results ranging from modestly negative to strongly positive (14). Thus far, most many-analysts studies have been small in scale or focused on narrow, field-specific analysis methods (15, 16). Recent studies by Botvinik-Nezer et al. (17) and Menkveld et al. (18) were larger, involving 65 and 164 teams, respectively. Critically, despite their size, these studies also found large interresearcher variation in reported results. They also made first steps at explaining the amount of variation in reported results using a small set of variables, such as the computational reproducibility and peer ratings of submitted analyses or the statistical software that analysts used. Yet, they had little success in explaining the variation in results or the distance of results from the overall mean of the results (i.e., error). We expanded on these explanatory attempts by observing every step of each independent research team’s workflow, expecting that such close observation should explain far more variance in research outcomes. Moreover, when coupled with measures of relevant analytical competencies and substantive beliefs of the analysts as explanatory variables, we expected to arrive at a deeper understanding of the results and crucially, which key decisions drive them.

Methods

The principal investigators (PIs) coordinated a group of 161 researchers in 73 teams to complete the same task of independently testing a hypothesis central to an “extensive body of scholarship” (19) in the social sciences: that immigration reduces support for social policies among the public.* Our entire reproducible workflow for this study is available online in our Project Repository. The task given to the participants is typical for research on human societies, in which the central concepts and quantities of interest are open to broad and complex interpretations (20, 21). In classic political economy research, for example, Alberto Alesina and Edward Glaeser (22, 23) hypothesized that differences in North American and European social security systems are a result of immigration-generated ethnic diversity or a lack thereof. More recently, other scholars see immigration and refugee crises as catalysts of retrenchment of social security systems in Western Europe and across the globe. Put simply, this hypothesis was given to participating teams because it is influential, long standing, and typical for contemporary social research in political science, sociology, economics, geography, and beyond (2429).

We recruited participants by circulating a call across academic networks, social media, and official communication channels of academic associations across social science disciplines (SI Appendix, Research Design). Although 106 teams expressed interest in participation, we count our initial sample as 88 that completed the prestudy questionnaire. In the end, 73 of those 88 teams (a total of 161 researchers with an average of 2.24 researchers per team) completed the study. Of these, 46% had a background in sociology; 25% had a background in political science; and the rest had economics, communication, interdisciplinary, or methods-focused degree backgrounds. Eighty-three percent had experience teaching courses on data analysis, and 70% had published at least one article or chapter on the substantive topic of the study or the usage of a relevant method (SI Appendix, III. Participant Survey Codebook has more participant details).

The PIs provided teams with data from the International Social Survey Program (ISSP), a long-running large-scale cross-nationally comparative survey of political and economic attitudes used in over 10,000 published studies. The ISSP includes a six-question module on the role of government in providing different social policies, such as old-age, labor market, and health care provisions. This six-question module is also the source of the data used by David Brady and Ryan Finnigan (19) in one of the most cited investigations of the substantive hypothesis participants were instructed to test. The PIs also provided yearly indicator data for countries on immigrant 'stock' as a percentage of the population and on 'flow' as a net change in stock, taken from the World Bank, the United Nations, and the Organization for Economic Co-Operation and Development. Relevant ISSP and immigration data were available for 31 mostly rich and some middle-income countries. There were up to five survey waves from 1985, 1990, 1996, 2006, and 2016. All provided data come from publicly available sources.

To remove potentially biasing incentives, all researchers from teams that completed the study were ensured coauthorship on the final paper regardless of their results. Because the “participants” themselves were researchers and all tasks assigned to them were standard research practices theoretically worthy of coauthorship, institutional review prior to conducting this study was not necessary. The researchers participated in surveys to measure expertise and study-relevant beliefs and attitudes before and during the research process. Moreover, they took part in online deliberations before (a randomized half of teams) and after they had run their main analyses (all teams) (SI Appendix, III. Participant Survey Codebook). To familiarize participating researchers with the data, their first task was to numerically reproduce results from the Brady and Finnigan (19) study on a subset of the ISSP data. This was followed by a request that the teams develop their own ideal models for testing the same hypothesis using potentially all of the provided data, but that they submit their analysis plan prior to running the models. To enhance ecological validity, we allowed the teams to include additional data sources for measuring independent variables. Each team was then instructed to run their model(s) and report dependent variable–standardized effect estimates equal to the change in policy preferences (in SD units) predicted by a one-point change in the respective independent immigration variable. We also asked them to draw one of three subjective conclusions: whether their results offered evidence that supported the hypothesis that immigration reduces support for social policies among the public, whether their results offered evidence that rejected the hypothesis, or instead, whether they believed the hypothesis was not testable given these data.

Of the 73 teams, 1 conducted preliminary measurement scaling tests, concluded that the hypothesis could not be reliably tested, and thus, did not design or carry out any further tests. This left 72 teams submitting a total of 1,261 models. One team’s preregistered models failed to converge and thus, had no numerical results. This left a total of 71 teams with numerical results from 1,253 models. In their subjective conclusions, 16 teams determined that the two different measures of immigration should be considered independent hypothesis tests and therefore, submitted different conclusions for each. This changed the primary unit of analysis for subjective conclusions from 73 team conclusions to 89 team-level conclusions.

There was an average of 17.5 models per team among the 71 teams submitting numerical results (ranging from 1 to 124 models per team). Most teams submitted at least 12 models because they used each of the six ISSP questions as a single dependent outcome twice in their statistical models, once for each version of the immigration measure (stock and flow). Several teams submitted 18 models because they ran an additional 6 models with both immigration variables included. The teams often adjusted for the nested nature of the data, accounting for variance at the individual, country, year, and/or country-year levels. Some made no such hierarchical adjustments with multilevel models, and others used clustering of the SEs at the country, wave, and/or country-wave levels. Some used dummy interactions for example world region indicators (such as Eastern Europe) or political party preferences with immigration variables, leading to nonlinear predicted values. Others used alternative estimators based on maximum likelihood or Bayesian estimation as opposed to ordinary least squares (SI Appendix, Table S3 shows the most common model decisions). In all, researchers’ modeling decisions reflected the diversity of similar, but technically distinct, methodological approaches currently used in contemporary research.

Each team’s code was checked and then anonymized for public sharing by the PIs. Some teams failed to report a standardized estimate. Also, different scaling of the two independent immigration variables meant that results were not always distributionally comparable. Therefore, we standardized the teams’ results for each coefficient for stock and flow of immigration post hoc. We also transformed the teams’ results into average marginal effects (AMEs), which are the standardized average effects of a one-unit change in the respective independent (immigration) variable on the respective dependent (policy support) variable, where this average is based on predictions for each observation in the dataset. The advantage of using AMEs is that they allow for a single marginal estimate in the presence of nonlinearities and present predicted probabilities that reflect the reality of the data sample rather than the mean of each independent variable (Fig. 1 shows results). After submitting their own results but prior to seeing the other teams’ results, each participant was randomly given a rough description of the models employed by four to five other teams and asked to rank them on their quality for testing the hypothesis. With six to seven rankings per team, the PIs constructed model rankings (SI Appendix, Model Ranking).

Fig. 1.

Fig. 1.

Broad variation in the findings from 73 teams testing the same hypothesis with the same data. The distribution of estimated AMEs across all converged models (n = 1,253) includes results that are negative (yellow; in the direction predicted by the given hypothesis the teams were testing), not different from zero (gray), or positive (blue) using a 95% CI. AME are xy standardized. The y axis contains two scaling breaks at ±0.05. Numbers inside circles represent the percentages of the distribution of each outcome inversely weighted by the number of models per team.

At any point after they submitted their results, including after results of the other teams were revealed, the teams could change their preferred models and resubmit their results and conclusion. No team voluntarily opted to do this. However, some teams’ results and conclusions changed after they were informed that the PIs were unable to reproduce their findings due to coding mistakes or a mismatch between their intended models and those that appeared in the code.

Next, we examined all 1,261 models and identified 166 distinct research design decisions associated with those models. “Decision” refers to any aspect in the design of a statistical model: for example, the measurement strategy, estimator, hierarchical structure, choice of independent variables, and potential subsetting of the data (SI Appendix, Table S12). For simplicity, decision also refers to variables measuring team characteristics, such as software used, overall familiarity with the subject or methods, and preexisting beliefs as measured in our participant survey (SI Appendix, Table S1). Of the 166 decisions, 107 were taken by at least three teams. We used these 107 as variables that might statistically explain the variation in the results and conclusions because the other 59 were unique to one or two teams and would thus impede statistical identification. In other words, uniquely identifying one or two teams' results via the variance in a single independent variable in the regression would interrupt the parsimonious estimation of residual, unexplained variance calculated in the level 2 equation. A dissimilarity matrix revealed that no two models of 1,261 were 100% identical.

To explore the sources of variance in results, we regressed the numerical point estimates and subjective conclusions on all different combinations and interactions of the 107 decisions. We used multilevel regression models, allowing us to account for models nested in teams and to explain total, within-team, and between-team variance in numerical results. For subjective conclusions, we used multinomial logistic regressions predicting teams’ conclusions to 1) support or 2) reject the target hypothesis, or 3) regard it as not testable. Our analyses proceeded in several stages. At each stage, decision variables and their interactions were tested, and only terms that explained the most variance using the least degrees of freedom (or deviance in the case of subjective conclusions) were carried to the next phase.

Exploring the variance in results runs the risk of overfitting. It is statistically inappropriate to use 107 variables when there are 87 team-test cases (from 71 teams with numerical results). Therefore, we entered the variables in groups and only kept variables from each group that showed an increase in the explained variance without a loss in fit as measured by Akaike's Information Criterion (AIC) and log likelihood. This started with “design” decisions, including which of the six survey questions the teams used as the dependent variable in a given model and dummies indicating the two random experimental treatments (which were included in the study but are unrelated to the main modeling task assigned to the teams). The next stage added “measurement” decisions, including which immigration measure the team used in a given model and how the dependent variable was measured (dichotomous, ordinal, multinomial, or continuous). The following stages added “data and sample” and “model design” decisions and concluded with the addition of “researcher aspects” (Project Repository, 04_CRI_Main_Analyses). We also reran the phase-wise analysis separately for each of the six survey questions used as dependent variables by the teams (Project Repository, 07_CRI_DVspecific_Analyses) (SI Appendix, Tables S4 and S9–S11). The exact variables in our final analysis plus various models leading up to them are found in SI Appendix, Tables S5 and S7. Fig. 2 reports the explained variance from our preferred model m13.

Fig. 2.

Fig. 2.

Variance in statistical results and substantive conclusions between and within teams is mostly unexplained by conditions, research design, and researcher characteristics. Decomposition of numerical variance taken from generalized linear multilevel regression models' AMEs (the top three rows). Explained deviance taken from multinomial logistic regressions using the substantive conclusions about the target hypothesis as the outcome submitted by the research teams (bottom row). We used informed stepwise addition and removal of predictors to identify which specifications could explain the most numeric variance (SI Appendix, Table S6) and others that could explain the most subjective conclusion deviance (SI Appendix, Table S7) while sacrificing the fewest degrees of freedom and maintaining the highest level of model fit based on log likelihood and AIC. We also used algorithms to test variable combinations, but these could not explain more meaningful variation (Methods). Assigned conditions were the division of participants into two different task groups and two different deliberation groups during the preparatory phase. Identified researcher decisions are the 107 common decisions taken in data preparation and statistical modeling across teams and their models. Researcher characteristics were identified through a survey of participants and multiitem scaling using factor analysis (SI Appendix, Fig. S3). The reader will find many other details in SI Appendix.

To check the robustness of our phase-wise strategy, we used an algorithm to analyze all possible variable combinations from our primary variables of interest—those that showed any capacity to explain variance in the main analyses (Project Repository, 06_CRI_Multiverse). This led us to a slightly different ideal model than m13 (Auto_1 in SI Appendix, Table S10). Although this alternative model had the best AIC and could explain slightly more model-level variance, it could not explain as much total variance. We then combined all variables from our main model (m13) and the algorithm-derived model (Auto_1) to generate a new model (Auto_1_m13). Although this new model explained more variance and had lower AIC, we were careful not to overfit because it had 22 variables, whereas m13 and Auto_1 had 18 and 15, respectively.

Next, based on PNAS peer review feedback, we generated a list of every possible interaction pair of all 107 variables. Of these 5,565 interactions, 2,637 have nonzero variance and thus, were usable in a regression without automatically being dropped. Including 8 or more interaction variables plus their main effects (i.e., 24 or more variables, many that were cross-level interactions) led to convergence or overidentification problems. Even with 87 level 2 cases, this leaves us with roughly 4 cases per variable. Research reviewing different simulation studies on level 2 case numbers suggests that 10 cases per variable are a bare minimum, and we should have closer to 50 ideally (30). Therefore, we settled on 7 interacted variables as our absolute maximum (which corresponds to 21 variables, including two main effects for each interaction). We then randomly sampled 1,000 sets of 7 variables from the list of all and let the algorithm run every subcombination of these, which led to just over 1 million models. We then took the 2 models with the lowest AIC score from each of the 1,000 iterations and extracted all variables from those models. There were 19 unique variables among the 2,000 best-fitting models in total, which we then analyzed using the same “random-seven” sampling method. The best-fitting models from this second iteration left us with four interaction variables as candidates to explain more variance while avoiding sacrificing the simplicity of the model and overfitting (as indicated by model AIC). We added each of these variables separately to our initial algorithm-generated results. None of these models could explain more variance in research outcomes than m13 or Auto_1_m13 (SI Appendix, Table S10, Auto_2 to Auto_5).

Main Results

Fig. 1 visualizes the substantial variation of numerical results reported by 71 researcher teams that analyzed the same data. Results are diffuse. Little more than half the reported estimates were statistically not significantly different from zero at 95% CI, while a quarter were significantly different and negative, and 16.9% were statistically significant and positive.

We observe the same pattern of divergent research outcomes when we use the teams’ subjective conclusions rather than their statistical results. Overall, 13.5% (12 of 89) of the team conclusions were that the hypothesis was not testable given these data, 60.7% (54 of 89) were that the hypothesis should be rejected, and 28.5% (23 of 89) were that the hypothesis was supported (SI Appendix, Figs. S5, S9, and S10).§

We find that competencies and potential confirmation biases do not explain the broad variation in outcomes; researcher characteristics show a statistically significant association with neither statistical results nor substantive conclusions (Fig. 3). Hence, the data are not consistent with the expectation that outcome variability simply reflects a lack of knowledge among some participants or preexisting preferences for particular results.

Fig. 3.

Fig. 3.

Researcher characteristics do not explain outcome variance between teams or within teams. The distribution of team average of AMEs (Left) and within-team variance in AMEs (Right) across researchers grouped according to mean splits (“lower” and “higher”) on methodological and topic expertise (potential competencies bias) and on prior attitudes toward immigration and beliefs about whether the hypothesis is true (potential confirmation bias). Log variance was shifted so that the minimum log value equals zero. Teams submitting only one model assigned a variance of zero. Pearson correlations along with a P value (“R”) are calculated using continuous scores of each researcher characteristic variable.

In principle, variation in outcomes must reflect prior decisions of the researchers. Yet, Fig. 2 shows that the 107 identified decision points explain little of the variation. The major components of the identified researcher decisions explain less than a quarter of the variation in four measures of research outcomes. Most variance also remains unexplained after accounting for researcher characteristics or assignment to a small experiment (not reported in this study) (“assigned conditions” in Fig. 2). Looking at total variance in the numerical results (top bar), identified components of the research design explain 2.6% (green segment), and researcher characteristics only account for a maximum of 1.2% of the variance (violet segment). In other words, 95.2% of the total variance in results is left unexplained, suggesting that massive variation in reported results originated from idiosyncratic decisions in the data analysis process.

The share of explained variance is somewhat higher when looking at between-team results (second bar), but still, 82.4% remained unexplained. Variance continues to remain mostly unexplained when moving away from the numerical results and considering researchers’ substantive conclusions (bottom bar; 80.1% unexplained). It is noteworthy that even the percentage of test results per team that statistically support their conclusions explains only about a third of the deviance in conclusions (salmon-colored segment in the bottom bar), which points at the variation in how different researchers interpret the same set of numerical results. Overall, the complexity of the data-analytic process leads to variation that cannot be easily explained, even with a close look at researcher characteristics and researcher decisions.

Finally, we followed previous many-analysts research (31) by creating a benchmark for the above results via a multiverse simulation of possible model specifications. Using the same approach, we found that 23 decisions could explain just over 16% of the variance in numerical outcomes among 2,304 simulated models (SI Appendix, Table S8). In contrast to our ecological research setting observing actual researcher behaviors, we fall far short of this 16% simulated total explained variance by almost 12 percentage points. Even with the use of an algorithm to sample all possible variable combinations, we remain over 11 percentage points short.

Discussion

Results from our controlled research design in a large-scale crowdsourced research effort involving 73 teams demonstrate that analyzing the same hypothesis with the same data can lead to substantial differences in statistical estimates and substantive conclusions. In fact, no two teams arrived at the same set of numerical results or took the same major decisions during data analysis. Our finding of outcome variability echoes those of recent studies involving many analysts undertaken across scientific disciplines. The study reported here differs from these previous efforts because it attempted to catalog every decision in the research process within each team and use those decisions and predictive modeling to explain why there is so much outcome variability. Despite this highly granular decomposition of the analytical process, we could only explain less than 2.6% of the total variance in numerical outcomes. We also tested if expertise, beliefs, and attitudes observed among the teams biased results, but they explained little. Even highly skilled scientists motivated to come to accurate results varied tremendously in what they found when provided with the same data and hypothesis to test. The standard presentation and consumption of scientific results did not disclose the totality of research decisions in the research process. Our conclusion is that we have tapped into a hidden universe of idiosyncratic researcher variability.

This finding was afforded by a many-analysts design as an approach to scientific inquiry. Some scholars have proposed multiverse analysis to simulate analytic decisions across researchers (31), a method to provide a many-analysts set of outcomes without the massive coordination and human capital commitment otherwise necessary for such a study. The drawback of a simulation approach is that it is constructed based on a single data analysis pipeline from one research team and may not reflect the complex reality of different research processes carried out by different teams in different contexts. This study observed researchers in a controlled yet ecological work environment. In doing so, it revealed the hidden universe of consequential decisions and contextual factors that vary across researchers and that a simulation, thus far, cannot capture.

Implications.

Researchers must make analytical decisions so minute that they often do not even register as decisions. Instead, they go unnoticed as nondeliberate actions following ostensibly standard operating procedures. Our study shows that, when taken as a whole, these hundreds of decisions combine to be far from trivial. However, this understanding only arises from the uniqueness of each of the 1,253 models analyzed herein. Our findings suggest reliability across researchers may remain low even when their accuracy motivation is high and biasing incentives are removed. Higher levels of methodological expertise, another frequently suggested remedy, did not lead to lower variance either. Hence, we are left to believe that idiosyncratic uncertainty is a fundamental feature of the scientific process that is not easily explained by typically observed researcher characteristics or analytical decisions.

These findings add a perspective to the metascience conversation, emphasizing uncertainty in addition to bias. The conclusion warranted from much of the metascience work carried out in the wake of the “replication crisis” in psychology and other fields has been that published research findings are more biased than previously thought. The conclusion warranted from this and other similar studies is that published research findings are also more uncertain than previously thought.

As researchers, we bear the responsibility to accurately describe and explain the world as it is but also, to communicate the uncertainty associated with our knowledge claims. Although the academic system privileges innovation over replication, providing a novel answer to a question is just as essential as informing about how much trust we can place in that answer. Our study has shown that to fully assess and address uncertainty, replications are valuable but insufficient. Only large numbers of analyses may show whether in a specific field, independent researchers reliably arrive at similar conclusions, thus enhancing or undermining our confidence in a given knowledge claim.

Specifically, we believe that serious acknowledgment of idiosyncratic variation in research findings has at least four implications for improving the presentation and interpretation of empirical evidence. First, contemplating that results might vary greatly if a given study had been conducted by a different set of researchers or even the same researchers at a different time, calls for epistemic humility when drawing conclusions based on seemingly objective quantitative procedures. Second, the findings remind us to carefully document everything because, in combination, even the most seemingly minute decisions could drive results in different directions; and only awareness of these minutae could lead to productive theroetical discussions or empirical tests of their legitimacy. Third, countering a defeatist view of the scientific enterprise, this study helps us appreciate the knowledge accumulated in areas where scientists do converge on expert consensus—such as the human impact on the global climate or a notable increase in political polarization in the United States over the past decades. Fourth, our study suggests that if we freed scientists from bias caused by the “perverse incentives” inherent in the institutions of science, their own preexisting biases or beliefs might not matter as much to the outcomes they generate as some may fear. In fairness, the teams indicated what models they intended to run in advance. Although they were free to update and change these at any time, we can assume that this may have reduced potential confirmation bias.

Limitations and Outlook.

Our study has limitations that warrant discussion. First, we do not know the generalizability of our study to different topics, disciplines, or even datasets. A major segment of social science works with survey data, and our results reflect this type of research. In experimental research, the data-generating model is often clearer or involves fewer decisions. Moreover, in social research, there are no Newtonian laws or definite quantum statistical likelihoods to work with, suggesting that our case might overestimate variability compared with the natural sciences. On the other hand, functional magnetic resonance imaging (fMRI), gene, and space telescope data, for example, are far more complex than what we gather in social surveys. The complexity of data analysis pipelines is correspondingly greater in these fields, but it is possible that having more analytical decisions allows us to account for more of the variation in research outcomes. We believe that the number of decision points in data analysis and the extent to which researchers understand the data-generating process may determine the degree of outcome variation in a field, but it remains an open question if and how design decisions play a smaller or larger role across fields.

Second, although we hoped to offer deeper insights on the substantive hypothesis under observation, we did not obtain evidence that moves conclusions in any direction. These lessons combined with the fact that a substantial portion of participants considered the hypothesis not testable with these data offer a potential explanation for why this is such a contested hypothesis in the social sciences (19, 24, 32).

Looking forward, we take the fact that 13.5% of participating analysts claimed that the target hypothesis is “not testable” with the provided data as a powerful reminder of the importance of design appropriateness and clear specification of hypotheses. This implicates clarity in the meaning of a conclusion. In our study, “support” of the hypothesis generally meant rejection of the null, whereas “reject” meant consistency with the null or inconclusive results. Teams were left to their own devices in deciding what constituted support for, evidence against, or nontestability of the target hypothesis, and this alone introduced a degree of indeterminacy into the research process. Overall, these observations call for more attention to conceptual, causal, and theoretical clarity in the social sciences as well as for the gathering of new data when results no longer appear to move a substantive area forward (20, 21). They also suggest that if we want to reap epistemic benefits from the present move toward open research practices, we must make more conscious efforts to complement methodological transparency with theoretical clarity.

Finally, we note that the conclusions of this study were themselves derived from myriad seemingly minor (meta-)analytical decisions, just like those we observed among our analysts. We, therefore, encourage readers to scrutinize our analytical process by taking advantage of SI Appendix, the reproduction files, and the web-based interactive app that allow for easy exploration of all data underlying this study.

Supplementary Material

Supplementary File

Acknowledgments

We thank the Mannheim Centre for European Social Research at the University of Mannheim (Mannheim, Germany) for providing extra institutional support for this large-scale project and Joachim Gassen at the Humboldt University (Berlin, Germany) for inspiration and feedback for our interactive app. Additionally helpful were comments provided at the Stanford Meta Research Innovation Center at Stanford (METRICS) International Forum, the Ludwig Maximilian University of Munich Sociology Research Colloquium, and the Technical University Chemnitz “Open Science” Conference and in personal communications with Steve Velsko. A portion of the late phases of coding and shiny app development was supported by a Freies Wissen (“Open Knowledge”) Fellowship of Wikimedia. The views expressed herein are those of the authors and do not reflect the position of the US Military Academy, the Department of the Army, or the Department of Defense.

Footnotes

The authors declare no competing interest.

This article is a PNAS Direct Submission.

See online for related content such as Commentaries.

*SI Appendix, Figs. S1 and S2 and Tables S1 and S2 have the time line and more participant details.

It is available at https://github.com/nbreznau/CRI.

Information is available at https://issp.org/about-issp/.

§This is a reminder that 16 teams reported two differing conclusions based on their interpretation of different model specifications, causing the N to jump from 72 teams to 89 team-conclusion units of analysis (Methods).

This article contains supporting information online at https://www.pnas.org/lookup/suppl/doi:10.1073/pnas.2203150119/-/DCSupplemental.

Data, Materials, and Software Availability

Data and code have been deposited in GitHub (https://github.com/nbreznau/CRI) (33), and Harvard Dataverse (https://doi.org/10.7910/DVN/UUP8CX) (34).

References

  • 1.Solomon M., Social Empiricism (MIT Press, 2007). [Google Scholar]
  • 2.Oreskes N., Why Trust Science? (Princeton University Press, 2019). [Google Scholar]
  • 3.Camerer C. F., et al. , Evaluating the replicability of social science experiments in Nature and Science between 2010 and 2015. Nat. Hum. Behav. 2, 637–644 (2018). [DOI] [PubMed] [Google Scholar]
  • 4.Open Science Collaboration, PSYCHOLOGY. Estimating the reproducibility of psychological science. Science 349, aac4716 (2015). [DOI] [PubMed] [Google Scholar]
  • 5.Ritchie S., Science Fictions: How Fraud, Bias, Negligence, and Hype Undermine the Search for Truth (Metropolitan Books, 2020). [Google Scholar]
  • 6.Sørensen A. B., The structural basis of social inequality. Am. J. Sociol. 101, 1333–1365 (1996). [Google Scholar]
  • 7.Frey B. S., Publishing as prostitution? Choosing between one’s own ideas and academic success. Public Choice 116, 205–223 (2003). [Google Scholar]
  • 8.Gelman A., Loken E., The statistical crisis in science. Am. Sci. 102, 460 (2014). [Google Scholar]
  • 9.Orben A., Przybylski A. K., The association between adolescent well-being and digital technology use. Nat. Hum. Behav. 3, 173–182 (2019). [DOI] [PubMed] [Google Scholar]
  • 10.Del Giudice M., Gangestad S., A traveler’s guide to the multiverse: Promises, pitfalls, and a framework for the evaluation of analytic decisions. Adv. Methods Pract. Psychol. Sci., 10.1177/2515245920954925 (2021). [DOI] [Google Scholar]
  • 11.Simmons J. P., Nelson L. D., Simonsohn U., False-positive psychology: Undisclosed flexibility in data collection and analysis allows presenting anything as significant. Psychol. Sci. 22, 1359–1366 (2011). [DOI] [PubMed] [Google Scholar]
  • 12.Schimmack U., A meta-psychological perspective on the decade of replication failures in social psychology. Can. Psychol. 61, 364–376 (2020). [Google Scholar]
  • 13.Freese J., Peterson D., The emergence of statistical objectivity: Changing ideas of epistemic vice and virtue in science. Sociol. Theory 36, 289–313 (2018). [Google Scholar]
  • 14.Silberzahn R., et al. , Many analysts, one data set: Making transparent how variations in analytic choices affect results. Adv. Methods Pract. Psychol. Sci. 1, 337–356 (2018). [Google Scholar]
  • 15.Dutilh G., et al. , The quality of response time data inference: A blinded, collaborative assessment of the validity of cognitive models. Psychon. Bull. Rev. 26, 1051–1069 (2019). [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 16.Bastiaansen J. A., et al. , Time to get personal? The impact of researchers choices on the selection of treatment targets using the experience sampling methodology. J. Psychosom. Res. 137, 110211 (2020). [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 17.Botvinik-Nezer R., et al. , Variability in the analysis of a single neuroimaging dataset by many teams. Nature 582, 84–88 (2020). [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 18.Menkveld A. J., et al. , Non-standard errors. Social Science Research Network [Preprint] (2022). 10.2139/ssrn.3961574 (Accessed 4 January 2022). [DOI]
  • 19.Brady D., Finnigan R., Does immigration undermine public support for social policy? Am. Sociol. Rev. 79, 17–42 (2014). [Google Scholar]
  • 20.Auspurg K., Brüderl J., Has the credibility of the social sciences been credibly destroyed? Reanalyzing the “Many Analysts, One Data Set” Project. Socius 86, 532–565 (2021). [Google Scholar]
  • 21.Lundberg I., Johnson R., Stewart B. M., What is your estimand? Defining the target quantity connects statistical evidence to theory. Am. Sociol. Rev. 86, 532–565 (2021). [Google Scholar]
  • 22.Alesina A., Glaeser E., Why are welfare states in the US and Europe so different? What do we learn? Horizons Strategiques 2, 51–61 (2006). [Google Scholar]
  • 23.Alesina A., Glaeser E., Fighting Poverty in the US and Europe: A World of Difference (Oxford University Press, 2004). [Google Scholar]
  • 24.Alesina A., Murard E., Rapoport H., Immigration and preferences for redistribution in Europe. J. Econ. Geogr. 21, 925–954 (2021). [Google Scholar]
  • 25.Eger M. A., Even in Sweden: The effect of immigration on support for welfare state spending. Eur. Sociol. Rev. 26, 203–217 (2010). [Google Scholar]
  • 26.Garand J. C., Xu P., Davis B. C., Immigration attitudes and support for the welfare state in the American mass public. Am. J. Pol. Sci. 61, 146–162 (2017). [Google Scholar]
  • 27.Burgoon B., Immigration, integration, and support for redistribution in Europe. World Polit. 66, 365–405 (2014). [Google Scholar]
  • 28.Alt J., Iversen T., Inequality, labor market segmentation, and preferences for redistribution. Am. J. Pol. Sci. 61, 21–36 (2017). [Google Scholar]
  • 29.Pardos‐Prado S., Xena C., Immigration and support for social policy: An experimental comparison of universal and means-tested programs. Political Sci. Res. Methods 7, 717–735 (2019). [Google Scholar]
  • 30.Bryan M. L., Jenkins S. P., Multilevel modelling of country effects: A cautionary tale. Eur. Sociol. Rev. 32, 3–22 (2016). [Google Scholar]
  • 31.Schweinsberg M., et al. , Same data, different conclusions: Radical dispersion in empirical results when independent analysts operationalize and test the same hypothesis. Organ. Behav. Hum. Decis. Process. 165, 228–249 (2021). [Google Scholar]
  • 32.Eger M. A., Breznau N., Immigration and the welfare state: A cross-regional analysis of European welfare attitudes. Int. J. Comp. Sociol. 58, 440–463 (2017). [Google Scholar]
  • 33.Breznau N., et al. , The Hidden Universe of Data-Analysis. GitHub. https://github.com/nbreznau/CRI. Deposited 12 April 2021.
  • 34.Breznau N., et al. , The Crowdsourced Replication Initiative Participant Survey. Harvard Dataverse. https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/UUP8CX. Deposited 24 March 2021.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Supplementary File

Data Availability Statement

Data and code have been deposited in GitHub (https://github.com/nbreznau/CRI) (33), and Harvard Dataverse (https://doi.org/10.7910/DVN/UUP8CX) (34).


Articles from Proceedings of the National Academy of Sciences of the United States of America are provided here courtesy of National Academy of Sciences

RESOURCES