Abstract
The birth, maturation, and integration of new neurons in the adult hippocampus regulates specific learning and memory processes, responses to stress, and antidepressant treatment efficacy. This process of adult hippocampal neurogenesis is sensitive to environmental stimuli, including peripheral signals from certain cytokines, hormones, and metabolites, which can promote or hinder the production and survival of new hippocampal neurons. The trillions of microorganisms resident to the gastrointestinal tract, collectively known as the gut microbiota, also demonstrate the ability to modulate adult hippocampal neurogenesis. In doing so, the microbiota-gut-brain axis can influence brain functions regulated by adult hippocampal neurogenesis. Unlike the hippocampus, the gut microbiota is highly accessible to direct interventions, such as prebiotics, probiotics, and antibiotics, and can be manipulated by lifestyle choices including diet. Therefore, understanding the pathways by which the gut microbiota shapes hippocampal neurogenesis may reveal novel targets for non-invasive therapeutics to treat disorders in which alterations in hippocampal neurogenesis have been implicated. This review first outlines the factors which influence both the gut microbiome and adult hippocampal neurogenesis, with cognizance that these effects might happen either independently or due to microbiota-driven mechanisms. We then highlight approaches for investigating the regulation of adult hippocampal neurogenesis by the microbiota-gut-brain axis. Finally, we summarize the current evidence demonstrating the gut microbiota’s ability to influence adult hippocampal neurogenesis, including mechanisms driven through immune pathways, microbial metabolites, endocrine signalling, and the nervous system, and postulate implications for these effects in disease onset and treatment.
Keywords: Gut microbiome, gut microbiota, hippocampal neurogenesis, hippocampus, neurogenesis, microbiota-gut-brain axis, immune, vagus nerve, short-chain fatty acid, antidepressant, stress, cognition, diet, probiotic
1. Adult hippocampal neurogenesis
1.1. Introduction to adult hippocampal neurogenesis
The hippocampus is one of only two regions of the mammalian brain where new neurons are produced throughout life via a process called hippocampal neurogenesis which occurs in the neurogenic niche of the subgranular zone (SGZ) within the dentate gyrus (DG) of the hippocampus [1]. In 1965, by using thymidine-H3 tagging, Altman and Das discovered the existence of new-born granule cells in the adult rat dentate gyrus [2, 3]. Thymidine-H3 tagging was later combined with neuronal nuclear protein (NeuN), a marker of mature neurons, to confirm that neural stem cells proliferate and differentiate into mature granule neurons in the rat dentate gyrus [4], igniting interest in the functional relevance of these adult-born hippocampal neurons, and raising questions about whether adult hippocampal neurogenesis is also prevalent in humans.
By using a thymidine analogue called bromodeoxyuridine (BrdU), which incorporates into the DNA of all proliferating cells, and combining this with the neuronal markers NeuN, calbindin, and neuron specific enolase, a landmark paper in 1998 revealed evidence that adult hippocampal neurogenesis also occurs in the human dentate gyrus [1]. However, several publications in recent years have encouraged debate around the existence and importance of adult hippocampal neurogenesis in humans, and how it relates to brain disorders in humans [5–8].
Immunohistochemistry is currently the most widely used method to directly analyse hippocampal neurogenesis, as it allows for the identification and spatial understanding of specific proteins, or antigens, expressed during specific stages of the neurogenesis process. Various protein markers have been identified as being expressed at specific stages of neurogenesis such as during proliferation of neural stem cells, neuronal differentiation, maturation and survival, and integration into existing neuronal circuitry (Fig. 1) [9, 10].
1.2. Factors influencing adult hippocampal neurogenesis
The process of adult hippocampal neurogenesis is regulated by multiple endogenous factors. For instance, GABAergic excitation induces neuroblasts to develop into immature neurons [11]. Neurotrophic factors, such as brain-derived neurotrophic factor (BDNF), glia-derived nerve factor (GDNF), nerve growth factor (NGF) and insulin-like growth factor 1 (IGF-1) promote adult hippocampal neurogenesis [12–14]. Microglia, which are innate immune cells resident to the central nervous system, prune synapses of maturing neurons and can produce cytokines which can induce or hinder neuron development and survival [15].
Multiple exogenous factors also influence adult hippocampal neurogenesis (Fig. 2), including diet [16], stress [17–20], antidepressant treatment, exercise, and environmental stimuli [17, 21–23]. While the role of adult hippocampal neurogenesis in humans is not entirely clear, adult hippocampal neurogenesis has been shown to affect specific processes of learning and memory including spatial learning and memory [24–28], trace conditioning memory [29], pattern separation [30–32], and object recognition [33], and has been implicated in stress resilience [21, 34, 35], and antidepressant action [23, 36, 37] in rodents. While the existence of hippocampal neurogenesis during adulthood remains controversial in humans due to limitations such as tissue processing and the necessity to obtain brain tissue quickly post-mortem [38, 39], analysis of adult hippocampal neurogenesis in post-mortem human tissue has implicated adult hippocampal neurogenesis in Alzheimer’s Disease (AD) [40]. Due to the importance of adult hippocampal neurogenesis in regulating cognition, stress susceptibility, and antidepressant action, it is increasingly important to understand the factors influencing hippocampal neurogenesis (Fig. 2), and how they may potentially be utilized to improve current disease treatment options.
2. Factors that influence both adult hippocampal neurogenesis and the gut microbiome
Fascinatingly, several of the factors that are known to influence adult hippocampal neurogenesis demonstrate the parallel ability to influence the composition or function of the gut microbiome, the trillions of microorganisms which reside in the gastrointestinal tract (Fig. 3) [42]. The gut microbiota has been increasingly shown to manipulate cell processes and biological functions in the brain, including adult hippocampal neurogenesis, through what is known as the microbiota-gut-brain axis (Fig. 4) [43].
Although it is currently largely unknown whether lifestyle factors that influence adult hippocampal neurogenesis and the gut microbiome are driven by alterations to the gut microbiome or whether these effects happen independently and in parallel, increasing evidence through microbiota transplant studies [44–46], germ-free (GF) rodents completely devoid of microbes [47, 48], and microbiota-targeted interventions (such as antibiotics or dietary supplementation) [49, 50] have revealed a clear importance of the gut microbiota in hippocampal neurogenesis, as discussed later.
2.1. Stress and antidepressants
Adult hippocampal neurogenesis is disrupted during stress [46, 52], and has emerged as a target of antidepressant action [52]; a hallmark of chronic antidepressant treatments is the ability to increase adult hippocampal neurogenesis [53–58], which is required for some of the behavioural effects of some antidepressants [36, 37, 59]. A direct causal link between disrupted adult hippocampal neurogenesis and depression has not yet been established in humans. Nonetheless, human post-mortem studies have reported that antidepressant-treated individuals with diagnosed depression had a higher number of neural progenitor cells in the dentate gyrus compared with those with depression that were not treated with antidepressants [57, 58]. Moreover, the serum concentration of BDNF (a protein supporting neurogenesis) is reduced in patients with depression as well as in stressed rats and is normalized following antidepressant treatment [60, 61], indicating similar pathologies between humans and model organisms.
Both stress [62, 63] and antidepressants [64] also have a noticeable impact on the gut microbiome, and the gut microbiome has also been found to contribute to the stress response in rodents [65, 66]. Stress induces volatility in the gut microbiome [63], and different types of stress have varying effects on the composition of the gut microbiome. Stress during early life appears to reduce Lactobacillus abundance in primates and infants, along with reducing Bifidobacterium in infants [67, 68]. Lactobacillus displays sensitivity to various types of stress, including acute social stress, chronic unpredictable mild stress, and restraint stress in rodents [46, 69], and interestingly, Lactobacillus rhamnosus supplementation reduced anxiety behavior and the acute stress-induced elevation in plasma corticosterone in mice [70]. Furthermore, Helicobacter pylori increased in the mouse stomach following long-term psychosocial stress [71], while people suffering from post-traumatic stress disorder appear to have a lower abundance of Actinobacteria, Lentisphaerae, and Verrucomicrobia compared with trauma-exposed individuals [72].
Moreover, the antimicrobial effects of some antidepressants suggest their action may be, at least in part, mediated by their ability to restructure the gut microbiome. For instance, serotonin reuptake inhibitor antidepressants, such as fluoxetine and sertraline, can inhibit efflux pumps on bacterial cell walls, and display antimicrobial properties against some gram-positive bacteria, including Enterococcus and Staphylococcus [73], while fluoxetine demonstrates the ability to decrease Lactobacillus rhamnosus, Escherichia coli, Lactobacillus johnsonii, and Bacteroidales S24-7 in the rodent gut [64, 74]. Moreover, several antidepressants, including fluoxetine, escitalopram, duloxetine, and desipramine, have been shown to decrease the relative abundance of Adlercreutzia and Ruminococcus in mice, while concomitant administration of Ruminococcus flavefaciens to mice treated with the antidepressant duloxetine was sufficient to abolish some antidepressant effects of duloxetine [75], suggesting that not only can antidepressants affect gut bacteria but that gut bacteria can also affect antidepressant action, though adult hippocampal neurogenesis was not assessed in this study. While this evidence is promising, there exists a gap in understanding as to whether the gut microbiota can mediate antidepressant-like behaviour through altering adult hippocampal neurogenesis. Therefore, mechanistic studies evaluating the potential of the gut microbiota to mediate adult hippocampal neurogenesis in the context of stress and depression should be pursued to explore potential, novel, microbiota-based treatment options.
Meanwhile, germ-free (GF) mice, devoid of all microbes, exhibited an exaggerated hypothalamic-pituitary-adrenal (HPA) stress response compared to specific pathogen free (SPF) mice, and expressed less BDNF in the hippocampus compared to SPF mice [65]. The colonization of GF mice with a single strain of Bifidobacterium infantis normalized their divergent stress response [65]. Furthermore, patients suffering from major depressive disorder harbour unique signatures in their gut microbiomes, including decreased microbial diversity and richness, and when their faecal microbiota was transferred to healthy, naive rats, the recipient rats displayed anxiety-like and anhedonia behaviours [66]. Similarly, transferring the microbiota from stressed mice into naive mice is sufficient to transfer biological and behavioural phenotypes induced by stress, including decreased hippocampal endocannabinoid signalling, altered serum metabolite levels, and despair behaviour [46].
2.2. Environmental enrichment and exercise
Environmental enrichment, including exercise and learning tasks, increases adult hippocampal neurogenesis in healthy adult rodents [26, 76–78]. Through the promotion of hippocampal neurogenesis, environmental enrichment has been reported to promote the extinction of submissive and depressive-like phenotypes following social defeat stress and chronic exposure to an aggressor mouse, which are forms of psychosocial stressors [79]. Exercise is a form of environmental enrichment that promotes the production and survival of neurons in the adult hippocampus and has antidepressant-like behavioural effects [80, 81]. Although the mechanisms by which exercise promotes hippocampal neurogenesis are not fully established, exercise-induced release of serotonin in the central nervous system is key for the promotion of neuronal proliferation [82]. Moreover, exercise has been reported to increase serum BDNF in humans [81].
In parallel, it has been reported that exercise also impacts the gut microbiome [83, 84]. One study comparing endurance athletes to individuals with a high body mass index found that 48 taxa were increased in elite rugby players including increased Akkermansia and lower abundance of the taxon Bacteroidetes [83]. Exercise in humans has also been found to increase genera related to the production of short-chain fatty acids, including Faecalibacterium prausnitzii [85]. Moreover, the gut microbiota is able influence the trafficking of Ly6Chi monocytes, a known pathway by which exercise increases adult hippocampal neurogenesis [49, 86]. Recently, by transferring the microbes from mice exposed to environmental enrichment into standard rearing recipient mice, it was shown that the gut microbiota related to environmental enrichment can promote neuronal plasticity in the visual cortex, potentially via modulation of short-chain fatty acids [87], though whether the gut microbiota drives similar pro-plasticity occurrences in the hippocampus is currently unknown.
2.3. Aging
Aging involves the gradual deterioration of homeostatic functions coinciding with an increased incidence of disease [88]. The characteristics of aging can be seen at a genetic and cellular level, resulting in immunosenescence, an imbalance of chemical messengers (including a reduction in growth hormones, disequilibrium of neurotransmitters) and disrupted hormonal and nutrient sensing [88]. This whole-body degeneration is also evident in the physiology and function of the gastrointestinal tract, with marked changes in gastric motility, declining gastrointestinal epithelial barrier integrity [89], complications in digestion (such as hypochlorhydria), and deterioration of the ENS contributing to striking alterations of the gut microbiota [90].
Hippocampal neurogenesis is substantially reduced during physiological aging in rodents, primates, and humans [4]. Aged rodents (20–24 months) have a substantial loss in dentate gyrus progenitor proliferation, leading to a reduction in the production of new-born granule cells [91, 92]. Furthermore, senescence of the hippocampal neurogenic niche reduces the proportion of neural stem cells that are actively dividing [93, 94], perhaps due to a depletion in the quantity of neural stem cells [95]. This reduction in neurogenesis is noticeable in mice as young as 6 months of age and correlates to impaired cognition in rodents [96] as well as the progression of cognitive decline in Alzheimer’s Disease in rodent models and humans [9, 40]. Rejuvenating the aged neurogenic niche through diet, exercise, or factors in the blood has been shown to rescue aging-associated declines in hippocampal neurogenesis and cognitive deficits, as reviewed extensively elsewhere [97], further implicating hippocampal neurogenic processes with age-related cognitive decline. Furthermore, lifestyle factors such as exercise and cognitive stimulation promote hippocampal neurogenesis and may be protective against aging-related neuropathologies including cognitive decline [78, 98, 99]. This evidence suggests that targeting the aging-associated decline in hippocampal neurogenesis may be an important strategy for developing novel therapeutics for treating declining cognition in aging.
In addition to declining hippocampal neurogenesis, aging triggers an increase in intestinal microbial diversity which is correlated to frailty, longevity [100–103], and other markers of health in aging [104, 105]. Studies involving centenarians have implicated the gut microbiota in longevity and extreme aging, revealing specific taxa such as Akkermansia that may contribute to healthy aging [100, 106, 107]. Interestingly, germ-free rodents, void of any microbiota, have extended lifespans [108]. Moreover, transferring gut microbiota from young to adult killifish extended the lifespan of recipient fish, while microbes from age-matched donors had no such effect [102]. The distinguishable shift in the composition and diversity of the gut microbiome during mammalian aging typically leads to an increase in gut microbiota diversity as dominant commensal taxa are lost and replaced by other commensals and pathobionts [109]. Aging commonly triggers a decrease in the genera Prevotella, Roseburia, Corpococcus, Faecalibacterium, and Bifidobacterium, the latter of which includes several probiotic strains which have been preclinically shown to increase adult hippocampal neurogenesis, hippocampal BDNF expression, and convey anxiolytic effects to their host following stress [110–112]. Several other taxa begin to emerge in the aging gut and have been grouped into two categories; those associated with healthy aging (such as Akkermansia, Odoribacter, and Christensenellaceae) and pathobionts associated with worsened health in aging (such as Bilophila, Desulgovibrio, Fusobacterium, and Enterovacteriaceae) [109]. Moreover, the retention of abundance of Bacteroides or low microbial uniqueness correlated with increased mortality in elderly people [113]. Notably, the aged gut microbiota has been shown to promote systemic inflammation and immunosenescence, leading to T-cell activation and disrupting intestinal barrier integrity [114]. The capability for aging-associated gut microbiota to perturb adult hippocampal neurogenesis is discussed in section 3.1.3.
2.4. Diet
Preclinical dietary manipulations have revealed the importance of diet in promoting and maintaining adult hippocampal neurogenesis. Diets high in fat and sugar decrease hippocampal cell proliferation, the survival of newly born neurons, and hippocampal-dependent behaviour in mice and rats [50, 115, 116], potentially by influencing neuronal mitochondria biogenesis [50] and/or the increase in circulating corticosterone [116]. Meanwhile, long-term running exercise was able to counteract the blunting consequences of a high fat diet on the survival of newly born hippocampal neurons and promote spatial learning and reversal learning performance in the Morris water maze task in mice [117]. On the other hand, dietary patterns which can influence the gut microbiome, including caloric restriction and intermittent fasting, promote longevity and improve memory [118–127] potentially through the upregulation of brain-derived neurotrophic factor [128, 129].
Some dietary compounds have been deemed prebiotics since they are selectively utilized by the gut microbiome, such as fermentable fibres and phenolics [130]. Diets rich in prebiotics appear to ameliorate aging-related cognitive and immune deficits [131, 132] and have also been shown to alter hippocampal neurogenesis. For instance, higher consumption of certain prebiotic polyphenols can promote hippocampal neuron proliferation and survival [133–135]. Dietary supplementation with specific bacteria can directly alter adult hippocampal neurogenesis [46, 49, 110, 136, 137], as discussed in section 3.1.4.
3. The gut microbiota regulates adult hippocampal neurogenesis
The parallel between factors that influence both adult hippocampal neurogenesis and the gut microbiome make it less surprising that the gut microbiota can orchestrate alterations to neurogenesis in the hippocampus. While the factors outlined above could exert independent effects on gut microbiota and hippocampal neurogenesis, there is emerging evidence that the gut microbiota can regulate adult hippocampal neurogenesis. Manipulations of the gut microbiota, including germ-free rodents, antibiotics, microbiota transfers, and prebiotic dietary interventions, as well as studies interrogating potential mechanisms of action through the vagus nerve, immune system, and metabolite-driven routes, have laid solid preclinical evidence that there are multiple pathways by which the gut microbiota can regulate adult hippocampal neurogenesis, summarized in Fig. 4.
3.1. Evidence from gut microbiota manipulation studies
3.1.1. Germ-free rodents
As discussed previously, GF animals are completely sterile from all microorganisms, and therefore act as a clean slate for understanding how the microbiota shapes host biology. In addition to having distinctly aberrant immune profiles, gut abnormalities, and behavioural abnormalities including hyperactivity, cognitive deficits, and altered anxiety-like and depressive-like behaviour, GF rodents have unique disruptions within the brain, culminating in impaired blood-brain barrier function, immature microglia, increased myelination, and altered hippocampal neurogenesis [138]. In 2015, Ogbonnaya and colleagues found that adult GF mice had increased numbers of BrdU+/NeuN+ cells in the hippocampus [47]. Moreover, colonizing 3-week-old GF Swiss Webster mice with microbiota was unable to rescue these effects [47]. Others have since observed alterations in hippocampal neurogenesis in GF mice seems to be sex-, age-, and potentially strain-sensitive. Specifically, male C57BL/6J GF mice were shown to have fewer DCX+ maturing neurons in their hippocampus compared to conventional C57BL/6J mice at 4 weeks old –a transient effect which was not apparent at 8 or 12 weeks of age in this study [48], though the reduction in DCX+ cells in the hippocampus of adult male C57BL/6J GF mice compared to SPF mice was still significantly apparent in another study [139]. Meanwhile, the density of maturing neurons in 4-week-old female C57BL/6J mice did not significantly diverge from their conventional counterparts, and instead had a greater density of hippocampal DCX+ cells at 8 weeks of age, but not at 12 weeks of age [48]. Similar findings were observed in the proliferation and death of cells in the dentate gyrus [48]. Moreover, hippocampal serotonergic signalling [140] and serotonin biosynthesis [141] are disrupted in GF rodents, both of which are important regulators of hippocampal neurogenesis.
3.1.2. Antibiotics
While commonly administered to treat infections clinically, oral antibiotics also act as a useful tool for perturbing the gut microbiota and can therefore be useful for understanding the relationship between the gut microbiota and hippocampal neurogenesis. In mice, an orally administered cocktail of antibiotics consisting of ampicillin, vancomycin, ciprofloxacin, imipenem, and metronidazole for 7 weeks decreased hippocampal cell proliferation (BrdU), neuron maturation (BrdU/DCX/NeuN) and neuron survival (BrdU/NeuN), and also impaired novel object recognition [49]. Interestingly, this effect was prevented when mice were allowed free access to a running wheel or administered a faecal transplant from health SPF mice [49]. Moreover, through adoptive transfer or elimination of Ly6Chi monocytes, Möhle and colleagues demonstrated that gut microbiota signaling to trafficking Ly6Chi monocytes drive alterations to adult hippocampal neurogenesis [49]. Antibiotic use has been clinically associated with neurotoxicity in at-risk patients, including elderly and juvenile individuals [142], and chronic antibiotic use in middle-aged women was associated with decreased cognitive ability after a roughly 7-year follow-up [143]. Whether these clinical effects are mediated by the gut microbiota or are rather off-target direct consequences of antibiotics has not been confirmed.
3.1.3. Faecal microbiota transplant
Faecal microbiota transplant (FMT) involves the transfer of an entire microbiota from one organism into another organism and is therefore a valuable technique for interrogating how specific naturally existing microbial communities influence their host. FMT has been popularized medically for its 90% success rate in treating recurrent Clostridioides difficile infection, a life-threatening infection which is often resistant to existing antibiotics [144], and is now being trialled for other gastrointestinal diseases as well as neurological disorders, including depression [145].
In 2016, FMT from depressed patients into naïve rats was shown to induce anxiety-like and depressive-like phenotypes in the recipient rats, a phenomenon which did not occur when rats were given FMT from healthy people, however adult hippocampal neurogenesis was not investigated in this study [66]. Since then, FMT from depressed patients, as well as chronically stressed mice, has been shown to decrease the quantity of DCX+ immature neurons in the dentate gyrus of recipient naïve mice and to also induce depressive-like behaviour [46, 137], confirming that the gut microbiota is an active regulator of hippocampal neurogenesis, and also indicating that the gut microbiota may play an active role in the progression of diseases in which disrupted hippocampal neurogenesis has been implicated.
In addition to stress-related conditions, the gut microbiota has also been shown to play a causative role in the deficit in cognitive ability that occurs with aging. For instance, transplanting microbiota from aged mice into young mice impaired spatial memory and learning ability and altered synaptic plasticity-related protein expression [146]. Counterintuitively, despite the decreased hippocampal neurogenesis occurring in aged mice, when microbiota from aged mice where transplanted into young germ-free mice, the hippocampus of young recipient mice had increased DCX+ immature neurons in their dentate gyrus compared to their counterparts which received microbiota from young mice [44]. Meanwhile, FMT from 18-month old C57BL/6 mice into old germ-free mice did not induce differences in the density of hippocampal DCX+ cells [44], which indicates that, while the gut microbiota can confer alterations to hippocampal neurogenesis, the innate biology of the recipient is also critical for achieving specific microbiota-driven effects. Separately, adult hippocampal neurogenesis and memory function were impaired in 8-week-old male C57Bl/6 mice who were administered FMT from 9-month old 5xFAD mice (a mouse model of Alzheimer’s disease), but not from aged-matched C57BL/6 mice [147], potentially implicating the gut microbiome in the pathology of Alzheimer’s disease. There appears to be limitations for the ability of the gut microbiota to restore the aging-related reduction in hippocampal neurogenesis; a study investigating the impacts of faecal microbiota transfer from young mice to aged mice on the aging brain did not observe improvements in the survival of newly born hippocampal neurons, although some aspects of neurogenesis-linked spatial learning and memory were rescued following this microbiota transfer [148]. In addition to aging and stress related disruptions to hippocampal neurogenesis, FMT has also been utilized to demonstrate that the drug-induced restructuring of the gut microbiota also reshapes its ability to alter hippocampal neurogenesis. Mice that consumed a high-fat diet and also administered metformin, a drug commonly prescribed to treat diabetes, did not suffer from high-fat diet-induced deficits to hippocampal neurogenesis and cognitive ability. Moreover, when microbiota from these metformin-treated mice were transferred into mice currently on a high-fat diet but otherwise drug-naïve, FMT was sufficient to increase the number of proliferating cells in the hippocampus and improve novel object recognition [149].
3.1.4. Individual bacteria and consortia administration
While FMT is a valuable tool for understanding how complex communities of microorganisms impact their host, it does not allow for the granularity in deciphering whether specific microbes within the community are driving the observed effects. Moreover, FMT is an invasive procedure when conducted clinically, and carries a risk for transferring pathogenic bacteria. Therefore, administration of single bacterial strains or consortia of bacteria are useful approaches to tease out mechanistic details of how the gut microbiota impacts adult hippocampal neurogenesis. The discovery of individual probiotic strains or consortia of bacteria has historically been driven by correlative evidence showing a decreased relative abundance of specific bacteria in diseased populations and remains largely explorative. Nonetheless, through correlative approaches, a handful of bacteria have been shown to regulate hippocampal neurogenesis. For instance, administration of Lactobacilli plantarumWJL to chronically stressed mice for 5 weeks was sufficient to increase hippocampal cell proliferation and the survival of newly born neurons in the dentate gyrus [46]. Moreover, a consortium consisting of eight bacterial strains, including Lactobacillus acidophilus, Lactobacillus plantarum, Lactobacillus paracasei, Lactobacillus delbrueckii subsp. Bulgaricus and also Streptococcus thermophilus, Bifidobacterium breve, Bifidobacterium longum, Bifidobacterium infantis increased hippocampal neurogenesis in mice subjected to unpredictable chronic mild stress, an effect which FMT from SPF mice was unable to achieve [49]. A separate multi-strain mixture of bacteria, consisting primarily of Bifidobacterium animalis subsp. lactis and Streptococcus thermophilus along with other Lactobacillus and Lactiplantibacillus strains increased the number of DCX+ cells in the dentate gyrus and mitigated neuroinflammatory responses in mice injected with lipopolysaccharide, a component of the outer membrane of some bacteria [136]. Moreover, 2-week consumption of a dual-strain probiotic consisting of L. helveticus R0052 and B. longum R0175 increased the number of DCX+ cells in the dentate gyrus of male C57Bl/6 mice that had previously been exposed to water avoidance stress [110], and has clinically been shown to alleviate the severity of depression [150, 151].
While some bacteria appear to harness the ability to increase adult hippocampal neurogenesis, other strains have been shown to disrupt it. For instance, one study found that administration of Bacteroides uniformis or Bacteroides fragilis to naïve, antibiotic pre-treated mice reduced the mean number of DCX+ cells in the dentate gyrus compared to naïve, antibiotic pre-treated mice that received pasteurized Bacteroidetes [137].
3.1.5. Prebiotics and diet
Diets including various fruits and vegetables, which are high in prebiotic polyphenols [152], have been clinically associated with improvements in depressive symptomology [153], and yields antidepressant and anti-anxiolytic effects in various rodent models [154–156]. Meanwhile, a Mediterranean-style diet, which is high in fish oils, was sufficient to improve mental health scores in individuals with depression [157] and improve cognitive performance in aging humans [158]. Omega-3 fatty acids, which are prevalent in high-fish diets, have been shown to promote hippocampal neurogenesis in mice [159] and lobsters [160]. Separately, omega-3 fatty acids were able to act directly on cultured human hippocampal progenitor cells, therein preventing cortisol induced reductions in neurogenesis [161]. Nonetheless, the mechanisms of action for how specific diets and dietary compounds, such as polyphenols and fibres, exert their effects on the brain remains unknown, though their ability to influence the gut microbiota may allow for their potential effects on hippocampal neuroplasticity-related behaviours [132, 162, 163].
As defined earlier, prebiotics are substrates selectively utilized by the gut microbiome, such as fermentable fibres and phenolics [130]. Fermentable fibres can be digested by bacteria into short-chain fatty acids including acetate, butyrate, and propionate, which have immunomodulatory and histone deacetylase inhibitory properties, including directly in the brain [164, 165]. When administered orally to pigs for 4 weeks, sodium butyrate increased hippocampal neurogenesis and hippocampal granular cell layer volume [166]. Oral sodium butyrate has also been shown to ameliorate cognitive deficits and increase the expression of neurotrophic factors in rats subjected to early life stress [167], and decrease hippocampal neuroinflammation in aging mice [168]. The soluble dietary fibres fructo-oligosaccharides (FOS) and galacto-oligosaccharides (GOS) have been shown to regulate BDNF and synaptic protein expression in rodents [169, 170], though whether they can directly alter hippocampal neurogenesis has not yet been demonstrated.
In addition to fibre, various flavonols exert neurotrophic effects, although it is largely unclear whether these effects require the gut microbiome or simply restructure the gut microbiota independently from their effects in the hippocampus. For example, the polyphenol quercetin can enhance learning and memory, alleviate anxiety-like behaviour, increase neural stem cell and progenitor cell proliferation, promote neurotrophic factors including BDNF, and increase the quantity of DCX+ dentate gyrus cells in rats [162, 171]. Meanwhile, a citrus flavonoid, 3,5,6,7,8,3′,4′-Heptamethoxyflavone, increases adult hippocampal neurogenesis in mice that were exposed to chronic unpredictable mild stress [172]. Moreover, the peel of the Citrus kawachiensis fruit, which contains 3,5,6,7,8,3′,4′-Heptamethoxyflavone and other bioactive compounds prevented hippocampal microglia activation and ameliorated deficits in hippocampal neurogenesis in senescence-accelerated mouse-prone 8 (SAMP8) mice, a model of accelerated aging [173]. Another flavonoid, spinosin, exhibited a dose-dependent increase in dentate gyrus DCX+ neurons, as well as increased cell proliferation, survival, and improved cognitive performance in the passive avoidance test [174]. Meanwhile, the flavonoid oroxylin A increased the survival of newly generated hippocampal neurons in adult mice [175], although these effects may occur directly, rather than through the gut microbiome [176].
3.2. Potential mechanisms by which the gut microbiota influences adult hippocampal neurogenesis
There are several proposed mechanisms by which the gut microbiota may exert influence on adult hippocampal neurogenesis, including immune, neuronal, endocrine, and metabolite-driven pathways (Fig. 4).
3.2.1. Immune system and neuroinflammation
The gut microbiota regulates several aspects of the host immune system, including in the brain, potentially allowing the gut microbiota to influence hippocampal neurogenesis via immune signaling pathways. For instance, germ-free mice have defective hippocampal microglia, and a higher density of microglia overall [177]. The regulation of microglia by the gut microbiota appears to be at least partially controlled by microbially produced acetate, which can translocate from the gut to influence the maturity and function of microglia in the brain [165]. Microglia contribute to the balance of neuronal cell birth and death in the subgranular zone through apoptosis-coupled phagocytosis [178], allowing them to clear debris from destroyed cells. In response to phagocytosis, the microglia secretome is altered towards substrates that have been shown to support new neuron proliferation, such as VEGF and FGF2 [178, 179]. Furthermore, upon activation, microglia produce various cytokines to induce an immune response to dangerous threats. Neuroinflammation, mediated by proinflammatory cytokines including interleukin (IL)-1β, tumour necrosis factor α (TNFα), and IL-6, has detrimental consequences to the proliferation and development of newly born hippocampal neuronal cells [180–183], and immune responses, including cytokine release, are blunted in GF mice [184]. By regulating the function and maturity of hippocampal microglia, the gut microbiota may be able to reshape hippocampal neurogenesis, although this direct mechanistic link is yet to be established.
In addition to impacting the function of microglia, the gut microbiota contributes to the systemic priming of immune cells that may traffic to the brain. Through the use of genetic knockout mice and antibody depletion, circulating Ly6Chi monocytes were shown to play a pivotal role in promoting hippocampal neurogenesis [49]. Ly6Chi monocytes traffic throughout the body and are highly sensitive to gut microbiota-derived signals. Following antibiotic treatment, mice had lower numbers of Ly6Chi monocytes in the brain, blood, and bone marrow, and displayed deficits in hippocampal neurogenesis and behaviour [49]. Adaptive transfer of Ly6Chi monocytes from the bone marrow of C57BL/6 mice to antibiotic-treated mice was able to restore the proliferation and survival of newly born neurons in the dentate gyrus [49]. Fascinatingly, supplementation with an 8-strain probiotic cocktail was also able to rescue antibiotic-induced deficits in hippocampal neurogenesis and Ly6Chi monocyte levels, providing further evidence that the gut microbiota can regulate hippocampal neurogenesis through Ly6Chi monocytes [49].
The gut microbiome has been shown to modulate the function of various types of T cells, including CD8+ T cells [185, 186], CD4+ T cells [187, 188], and Th17 cells [189, 190], suggesting potential T cell-dependent mechanisms by which the gut microbiota might influence hippocampal neurogenesis. T cells are essential regulators of hippocampal neurogenesis [191]. For instance, CD8+ T cells are required for the beneficial effects of environmental enrichment on hippocampal neurogenesis, synaptic plasticity, and behaviour including anxiety-like behaviour and spatial learning in mice [192]. Meanwhile, depletion of CD4+ T lymphocytes significantly reduced hippocampal neurogenesis, while neuronal precursor cell proliferation was increased in Rag2-/- mice, mice which produce no mature T cells or B cells, following repopulation of CD4+ cells [193]. Another subset of T cells, T helper 17 (Th17) cells, can also produce IL-17 [194], which inhibits adult hippocampal neurogenesis in mice [195], and can promote susceptibility to depressive-like behaviour in mice [196].
By microbial crosstalk with microglia, monocytes, and T cells, the gut microbiota demonstrates the ability to influence hippocampal neurogenesis in adult rodents. More research needs to be conducted however to fully understand the cellular pathways and scope of capability of microbiota-immune signalling on influencing hippocampal neurogenesis.
3.2.2. Vagus nerve signalling
The vagus nerve innervates the gastrointestinal tract, allowing for bidirectional communication between the gut and the brain. Through virus-based tracing techniques, it was shown that vagal signals derived from the gut are relayed from the medial nucleus tractus solitarius through the medial septum and to dorsal hippocampal glutamatergic neurons, allowing gut-derived signals transmitted through the vagus nerve to control hippocampus-dependent episodic and spatial memory, and reduced the expression of neurogenic and neurotrophic markers (DCX and BDNF) in the dorsal hippocampus [197] though whether these signals were derived specifically from microbiota-vagus nerve interactions was not determined. Nonetheless, specific gut bacteria, such as Lactobacillus rhamnosus, demonstrate the ability to alter depressive-like behaviour, hippocampal microglia density, and specific hippocampal protein expression through the vagus nerve [70, 198]. The capacity for oral Lactobacillus rhamnosus JB1 treatment to alleviate the impact of stress on behaviour may be related to its ability to decrease the expression of the hippocampal GABAB1b gene [70], a receptor subunit that plays a crucial role in mediating stress resilience and the production of new hippocampal neurons [199]. Moreover, it was recently demonstrated that the vagus nerve is integral for the decreased hippocampal neurogenesis and hippocampus-dependent memory impairment caused by FMT from aged mice or humans into young mice [45]. However, the mechanisms by which bacteria can influence hippocampal neurogenesis directly through vagal pathways remains unclear.
Independent from the gut microbiota, stimulation of the vagus nerve has been reported to trigger increased progenitor cell proliferation, numbers of maturing neurons, and increased protein expression of the neurotrophic factor BDNF in the hippocampus of rodents [200–202]. Chronic simulation of the vagus nerve also promotes dendritic branching on immature hippocampal neurons [200]. Meanwhile, severing the vagus nerve via subdiaphragmatic vagotomy was sufficient to reduce hippocampal cell proliferation, neuronal differentiation, and BDNF mRNA expression in the adult hippocampus [197, 203].
3.2.3. Microbial Metabolites
Due to complexities in tracing the origins of metabolites within a living organism, it is difficult to decipher whether specific gut microbiota-derived molecules can translocate from the gut to the brain, where they have the potential to directly hinder or support neuronal birth, maturation, and survival. As such, few radioactive tracing studies exist that examine gut microbiota-derived metabolites within the brain. Recently, one study utilizing radioactive labelling revealed that the microbe-derived short chain fatty acid acetate translocated from the gut to the brain of mice, where it influenced hippocampal microglia metabolism and function [165]. While it is possible to speculate that alteration in the functionality of microglia would be able to alter hippocampal neurogenesis, this study did not examine hippocampal neurogenesis. Nonetheless, short chain fatty acids, including acetate, butyrate, and propionate, have been shown to directly promote neuronal differentiation in neural stem cells in vitro when applied in physiologically relevant levels [50, 204], and the oral administration of sodium butyrate increased proliferating cells, DCX+ neurons and granular cell layer volume in the hippocampus of pigs [166]. Furthermore, short chain fatty acid supplementation improved performance or prevented impairments in spatial learning and memory tasks, and increased BDNF protein expression in preclinical neurodegenerative disease models [205–207], although hippocampal neurogenesis was not specifically assessed.
As discussed extensively elsewhere [208], the gut microbiota can influence the bioavailability of hormones and neurotransmitters including within the tryptophan-kynurenine- serotonin pathways by synthesizing or degrading components of this pathway. These hormones have been strongly implicated in depression [208]. Of interest, tryptophan and its metabolites are able to be modulated by the gut microbiota, and can impact host cognitive function and mood [209], as well as hippocampal neurogenesis [139]. Recent research has found that indoles that are produced by the gut microbiota-driven metabolism of tryptophan can modulate hippocampal neuroplasticity and promote the neuronal differentiation of hippocampal neural progenitor cells through the activation of the aryl hydrocarbon receptor [139]. The gut microbiota can also regulate the production of serotonin in the gut [210]. Serotonin is integral for neuronal differentiation, neurogenesis, and the in vitro proliferation and survival of neurospheres derived from adult neural stem cells [211–213]. Germ-free mice have increased hippocampal serotonin [140] however whether gut-derived serotonin can translocate to the brain to in turn promote hippocampal neurogenesis is currently unknown.
3.2.4. The hypothalamic-pituitary-adrenal (HPA) axis and hormonal signalling
The hypothalamic-pituitary-adrenal (HPA) axis is a key endocrine pathway regulating the physiological response to stress. HPA axis activation triggers the release of glucocorticoids (including cortisol, or corticosterone in rodents) which can directly bind to receptors on neural stem and progenitor cells and hinder their proliferation and differentiation in vitro and in rodent models [214–216]. While a direct link between specific microbes directly regulating adult hippocampal neurogenesis through the HPA axis has not yet been elucidated, the gut microbiota can influence HPA axis activation. For instance, the HPA axis of male germ-free mice is hyperactive in response to restraint stress, resulting in increased corticosterone relative to SPF mice [65, 140], though whether this results in altered hippocampal neurogenesis post-stress is unknown. It may be plausible that the gut microbiota can adjust adult hippocampal neurogenesis through the HPA axis.
Several peptide hormones that regulate appetite and food intake also demonstrate the ability to influence adult hippocampal neurogenesis such as ghrelin [217–220], leptin [221–224], cholecystokinin [225–227], neuropeptide Y [227, 228], insulin-like growth factor 1 [229–232], gastric inhibitory polypeptide [233], and orexin-A [234]. Moreover, the gut microbiome has been linked to the regulation of several of these hormones including ghrelin [235, 236], leptin [236, 237], cholecystokinin [236, 238, 239], neuropeptide Y [237], although the mechanisms underlying these relationships remain largely elusive [240]. By targeting some of these molecules, there have been improvements in aging-associated impairments in hippocampal neurogenesis. For instance, by restoring insulin-like growth factor 1 levels in mice, researchers rescued the age-related decline in adult hippocampal neurogenesis [241, 242]. Mechanistic research needs to be conducted to better understand the involvement of the gut microbiota in regulating adult hippocampal neurogenesis through hormone-driven pathways.
4. Conclusions and Future Perspectives
In this review, we aimed to provide an overview of the current literature investigating the gut microbiota and adult hippocampal neurogenesis, including the impacts of specific microbes and mechanisms by which the gut microbiota has been shown to influence the proliferation, development, and survival of new-born neurons in the adult hippocampus. We first discussed overlaps in the factors that are known to influence adult hippocampal neurogenesis and the gut microbiome, postulating that these effects might be occurring independently and unrelatedly to one another, but that they also might be linked through microbiota-driven alterations to gut-brain dialogue. Nevertheless, there is a growing body of evidence that suggests that the gut microbiota regulates adult hippocampal neurogenesis. Therefore, we then provided the current state of evidence demonstrating that the gut microbiota plays an active role in shaping neurogenesis in the adult dentate gyrus. In doing so, we have outlined influential factors and biological pathways underlying the regulation of adult hippocampal neurogenesis by the gut microbiota.
The gut microbiota harbours the ability to utilize a variety of pathways to promote or hinder adult hippocampal neurogenesis, including direct communication through the nervous system, or indirect communications via microbial metabolites, the immune system, and hormones. Still, some potential avenues of the microbiota-gut-brain axis have yet to be investigated in the context of hippocampal neurogenesis. For instance, the gut microbiota contributes to the secretion of hormones by intestinal cells, such as ghrelin [240]. Meanwhile, intraperitoneal injection of ghrelin increases BrdU+/DCX+ cells in the dentate gyrus [217]. However, whether the microbial control of adult hippocampal neurogenesis is mediated by ghrelin, or other intestinal peptides, has not yet been demonstrated and should be explored. Moreover, it is currently unclear how an individual’s mode of birth and weaning timeframe impact hippocampal neurogenesis. Mouse pups born by caesarean section demonstrated heightened anxiety-like behaviour and altered neurochemistry that persists into adulthood –phenotypes which appear reversible by targeting the early life gut microbiota [243]. Moreover, the weaning timeframe is highly critical for gut microbiota-mediated early life immune system development, and substantially impacts regulatory T cells [244]. Therefore, it is plausible that early life events, including caesarean section birth and altered weaning timeframes may impact adult hippocampal neurogenesis in a microbiota-dependent manner.
Alterations to the gut microbiota are present in numerous brain disorders, including depression [66], Alzheimer’s Disease [245], and epilepsy [246], conditions in which adult hippocampal neurogenesis has been observed to be disrupted clinically or in relevant animal models [10, 246, 247]. Given the strong preclinical evidence demonstrating the ability of the gut microbiota to influence various aspects of adult hippocampal neurogenesis, the gut microbiota may be a viable therapeutic target for treating and preventing these diseases through its ability to alter adult hippocampal neurogenesis. The gut microbiota is highly accessible to interventions, including via probiotics, antibiotics, and lifestyle choices such as diet, which presents multiple opportunities to remediate abnormal hippocampal neurogenesis which may contribute to some brain disorders.
Currently, clinical conclusions about the mechanistic ability of the gut microbiota to influence adult hippocampal neurogenesis are highly limited by the technical challenges of assessing neurogenesis in living humans. Therefore, evidence demonstrating the role of the gut microbiota in modulating adult hippocampal neurogenesis, as well as its impact on behaviour and disease progression, is largely dependent on preclinical interrogations. While there are vast biological similarities between mouse and humans, evidence collected in rodent models might not fully reflect clinical biological scenarios. Importantly, the murine and human gut microbiomes are distinctly unique, and, although biological functionality appears relatively conserved between these species, differences in anatomy and physiology between mice and humans may mean that preclinically established mechanisms might not be capable of translating to humans [248, 249]. Therefore, it is difficult to confirm whether the gut microbiota utilizes the same pathways observed in preclinical studies to impact human adult hippocampal neurogenesis. Nonetheless, largescale clinical trials involving microbiota interventions will be incredibly useful for understanding how the gut microbiota may sculpt favourable effects on the brain and related behaviour and identifying clinical biomarkers of microbiota-driven health benefits to potentially reveal novel therapeutic options. Ultimately, understanding the pathways by which the gut microbiota influence hippocampal neurogenesis may allow for the development of novel therapeutics to ameliorate hippocampal neurogenesis dysfunction, which could provide crucial treatment options for improving cognition and mood in brain disorders.
ACKNOWLEDGMENTS
The authors have no acknowledgments to report.
Funding
KEG was supported by an Irish Research Council (IRC) Government of Ireland Postgraduate Scholarship (GOIPG/2019/3198). JFC is funded by Science Foundation Ireland SFI/12/RC/2273_P2, the Saks Kavanaugh Foundation, EU H2020 project DLV-848228 DIS-COvERIE, and Swiss National Science Foundation project CRSII5_186346/NMS2068. OFO is funded by Science Foundation Ireland 20/FFP-P/8758, the Biostime Institute Nutrition and Care (BINC) –Geneva Funding Programs, and is a Funded Investigator at APC Microbiome Ireland, a research Institute funded by Science Foundation Ireland (SFI/12/RC/2273_P2).
CONFLICTS OF INTEREST
JFC has received research funding from 4D Pharma, Cremo, Dupont, Mead Johnson, Nutricia, and Pharmavite; has been an invited speaker at meetings organized by Alimentary Health, Alkermes, Ordesa, and Yakult; and has served as a consultant for Alkermes and Nestle. This support neither influenced not constrained the contents of this article. OFO has received funding for unrelated contract research from Alkermes plc. and has received renumeration as an invited speaker at a meeting organised by Janssen OFO is currently conducting unrelated collaborative research with Marigot Ltd. This support neither influenced not constrained the contents of this article. KEG declares no conflicts of interest.
REFERENCES
- [1]. Eriksson PS, Perfilieva E, Bjork-Eriksson T, Alborn AM, Nordborg C, Peterson DA,et al., Neurogenesis in the adult human hippocampus, Nat Med 1998;4(11):1313–7. [DOI] [PubMed] [Google Scholar]
- [2]. Altman J, Das GD, Autoradiographic and histological evidence of postnatal hippocampal neurogenesis in rats, J Comp Neurol 1965;124(3):319–35. [DOI] [PubMed] [Google Scholar]
- [3]. Cameron HA, Woolley CS, McEwen BS, Gould E, Differentiation of newly born neurons and glia in the dentate gyrus of the adult rat, Neuroscience 1993;56(2):337–44. [DOI] [PubMed] [Google Scholar]
- [4]. Kuhn HG, Dickinson-Anson H, Gage FH, Neurogenesis in the dentate gyrus of the adult rat: age-related decrease of neuronal progenitor proliferation, J Neurosci 1996;16(6):2027–33. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [5]. Sorrells SF, Paredes MF, Cebrian-Silla A, Sandoval K, Qi D, Kelley KW, et al., Human hippocampal neurogenesis drops sharply in children to undetectable levels in adults, Nature, 2018;555(7696):377–81. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [6]. Tobin MK, Musaraca K, Disouky A, Shetti A, Bheri A, Honer WG, et al., Human Hippocampal Neurogenesis Persists in Aged Adults and Alzheimer’s Disease Patients, Cell Stem Cell 2019;24(6):974–82.e3. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [7]. Boldrini M, Fulmore CA, Tartt AN, Simeon LR, Pavlova I, Poposka V, et al., Human Hippocampal Neurogenesis Persists throughout Aging, Cell Stem Cell 2018;22(4):589–99.e5. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [8]. Spalding KL, Bergmann O, Alkass K, Bernard S, Salehpour M, Huttner HB, et al., Dynamics of hippocampal neurogenesis in adult humans, Cell 2013;153(6):1219–27. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [9]. Kozareva DA, Cryan JF, Nolan YM, Born this way: Hippocampal neurogenesis across the lifespan, Aging Cell 2019;18(5):e13007. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [10]. Babcock KR, Page JS, Fallon JR, Webb AE, Adult Hippocampal Neurogenesis in Aging and Alzheimer’s Disease, Stem Cell Reports 2021;16(4):681–93. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [11]. Tozuka Y, Fukuda S, Namba T, Seki T, Hisatsune T, GABAergic excitation promotes neuronal differentiation in adult hippocampal progenitor cells, Neuron 2005;47(6):803–15. [DOI] [PubMed] [Google Scholar]
- [12]. Vicario-Abejon C, Johe KK, Hazel TG, Collazo D, McKay RD, Functions of basic fibroblast growth factor and neurotrophins in the differentiation of hippocampal neurons, Neuron 1995;15(1):105–14. [DOI] [PubMed] [Google Scholar]
- [13]. Choi SH, Li Y, Parada LF, Sisodia SS, Regulation of hippocampal progenitor cell survival, proliferation and dendritic development by BDNF, Mol Neurodegener 2009;4:52. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [14]. Shohayeb B, Diab M, Ahmed M, Ng DCH, Factors that influence adult neurogenesis as potential therapy, Transl Neurodegener 2018;7:4. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [15]. Chintamen S, Imessadouene F, Kernie SG, Immune Regulation of Adult Neurogenic Niches in Health and Disease, Front Cell Neurosci 2020;14:571071. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [16]. Stangl D, Thuret S, Impact of diet on adult hippocampal neurogenesis, Genes Nutr 2009;4(4):271–82. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [17]. Mirescu C, Gould E, Stress and adult neurogenesis, Hippocampus 2006;16(3):233–8. [DOI] [PubMed] [Google Scholar]
- [18]. Gould E, Tanapat P, Stress and hippocampal neurogenesis, Biol Psychiatry 1999;46(11):1472–9. [DOI] [PubMed] [Google Scholar]
- [19]. Naninck EF, Hoeijmakers L, Kakava-Georgiadou N, Meesters A, Lazic SE, Lucassen PJ, et al., Chronic early life stress alters developmental and adult neurogenesis and impairs cognitive function in mice, Hippocampus 2015;25(3):309–28. [DOI] [PubMed] [Google Scholar]
- [20]. Tanapat P, Galea LA, Gould E, Stress inhibits the proliferation of granule cell precursors in the developing dentate gyrus, Int J Dev Neurosci 1998;16(3-4):235–9. [DOI] [PubMed] [Google Scholar]
- [21]. Levone BR, Cryan JF, O’Leary OF, Role of adult hippocampal neurogenesis in stress resilience, Neurobiol Stress 2015;1:147–55. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [22]. Duman RS, Nakagawa S, Malberg J, Regulation of adult neurogenesis by antidepressant treatment, Neuropsychopharmacology 2001;25(6):836–44. [DOI] [PubMed] [Google Scholar]
- [23]. Surget A, Tanti A, Leonardo ED, Laugeray A, Rainer Q, Touma C, et al., Antidepressants recruit new neurons to improve stress response regulation, Mol Psychiatry 2011;16(12):1177–88. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [24]. Epp JR, Scott NA, Galea LA, Strain differences in neurogenesis and activation of new neurons in the dentate gyrus in response to spatial learning, Neuroscience 2011;172:342–54. [DOI] [PubMed] [Google Scholar]
- [25]. Epp JR, Spritzer MD, Galea LA, Hippocampus-dependent learning promotes survival of new neurons in the dentate gyrus at a specific time during cell maturation, Neuroscience 2007;149(2):273–85. [DOI] [PubMed] [Google Scholar]
- [26]. Gould E, Beylin A, Tanapat P, Reeves A, Shors TJ, Learning enhances adult neurogenesis in the hippocampal formation, Nat Neurosci 1999;2(3):260–5. [DOI] [PubMed] [Google Scholar]
- [27]. Hairston IS, Little MT, Scanlon MD, Barakat MT, Palmer TD, Sapolsky RM, et al., Sleep restriction suppresses neurogenesis induced by hippocampus-dependent learning, J Neurophysiol 2005;94(6):4224–33. [DOI] [PubMed] [Google Scholar]
- [28]. Ambrogini P, Cuppini R, Cuppini C, Ciaroni S, Cecchini T, Ferri P, et al., Spatial learning affects immature granule cell survival in adult rat dentate gyrus, Neurosci Lett 2000;286(1):21–4. [DOI] [PubMed] [Google Scholar]
- [29]. Shors TJ, Miesegaes G, Beylin A, Zhao M, Rydel T, Gould E, Neurogenesis in the adult is involved in the formation of trace memories, Nature 2001;410(6826):372–6. [DOI] [PubMed] [Google Scholar]
- [30]. Clelland CD, Choi M, Romberg C, Clemenson GD Jr, Fragniere A, Tyers P, et al., A functional role for adult hippocampal neurogenesis in spatial pattern separation, Science 2009;325(5937):210–3. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [31]. Sahay A, Scobie KN, Hill AS, O’Carroll CM, Kheirbek MA, Burghardt NS, et al., Increasing adult hippocampal neurogenesis is sufficient to improve pattern separation, Nature 2011;472(7344):466–70. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [32]. Tronel S, Belnoue L, Grosjean N, Revest JM, Piazza PV, Koehl M, et al., Adult-born neurons are necessary for extended contextual discrimination, Hippocampus 2012;22(2):292–8. [DOI] [PubMed] [Google Scholar]
- [33]. Jessberger S, Clark RE, Broadbent NJ, Clemenson GD Jr, , Consiglio A, Lie DC et al., Dentate gyrus-specific knockdown of adult neurogenesis impairs spatial and object recognition memory in adult rats, Learn Mem 2009;16(2):147–54. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [34]. Snyder JS, Soumier A, Brewer M, Pickel J, Cameron HA, Adult hippocampal neurogenesis buffers stress responses and depressive behaviour, Nature 2011;476(7361):458–61. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [35]. Planchez B, Lagunas N, Le Guisquet AM, Legrand M, Surget A, Hen R, et al., Increasing Adult Hippocampal Neurogenesis Promotes Resilience in a Mouse Model of Depression, Cells 2021;10(5). [DOI] [PMC free article] [PubMed] [Google Scholar]
- [36]. Hill AS, Sahay A, Hen R, Increasing Adult Hippocampal Neurogenesis is Sufficient to Reduce Anxiety and Depression-Like Behaviors, Neuropsychopharmacology 2015;40(10):2368–78. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [37]. Santarelli L, Saxe M, Gross C, Surget A, Battaglia F, Dulawa S, et al., Requirement of hippocampal neurogenesis for the behavioral effects of antidepressants, Science 2003;301(5634)805–9. [DOI] [PubMed] [Google Scholar]
- [38]. Terstege DJ, Addo-Osafo K, Teskey GC, Epp JR New neurons in old brains: A cautionary tale for the analysis of neurogenesis in post-mortem tissue. bioRxiv. 2021. [DOI] [PMC free article] [PubMed]
- [39]. Kempermann G, Gage FH, Aigner L, Song H, Curtis MA, Thuret S, et al., Human Adult Neurogenesis: Evidence and Remaining Questions. Cell Stem Cell. 2018. [DOI] [PMC free article] [PubMed]
- [40]. Moreno-Jimenez EP, Flor-Garcia M, Terreros-Roncal J, Rabano A, Cafini F, Pallas-Bazarra N, et al., Adult hippocampal neurogenesis is abundant in neurologically healthy subjects and drops sharply in patients with Alzheimer’s disease, Nat Med 2019;25(4):554–60. [DOI] [PubMed] [Google Scholar]
- [41]. Cruz-Pereira JS, Rea K, Nolan YM, O’Leary OF, Dinan TG, Cryan JF, Depression’s Unholy Trinity: Dysregulated Stress, Immunity, and the Microbiome, Annu Rev Psychol 2020;71:49–78. [DOI] [PubMed] [Google Scholar]
- [42]. Sarubbo F, Cavallucci V, Pani G, The Influence of Gut Microbiota on Neurogenesis: Evidence and Hopes, Cells 2022;11(3). [DOI] [PMC free article] [PubMed] [Google Scholar]
- [43]. Cryan JF, O’Riordan KJ, Cowan CSM, Sandhu KV, Bastiaanssen TFS, Boehme M, et al., The Microbiota-Gut-Brain Axis, Physiol Rev 2019;99(4):1877–2013. [DOI] [PubMed] [Google Scholar]
- [44]. Kundu P, Lee HU, Garcia-Perez I, Tay EXY, Kim H, Faylon LE, et al., Neurogenesis and prolongevity signaling in young germ-free mice transplanted with the gut microbiota of old mice, Sci Transl Med 2019;11(518):eaau4760. [DOI] [PubMed] [Google Scholar]
- [45]. Rei D, Saha S, Haddad M, Haider Rubio A, Perlaza BL, Berard M, et al., Age-associated gut microbiota impairs hippocampus-dependent memory in a vagus-dependent manner. JCI Insight. 2022. [DOI] [PMC free article] [PubMed]
- [46]. Chevalier G, Siopi E, Guenin-Macé L, Pascal M, Laval T, Rifflet A, et al., Effect of gut microbiota on depressive-like behaviors in mice is mediated by the endocannabinoid system, Nature Communications 2020;11(1). [DOI] [PMC free article] [PubMed] [Google Scholar]
- [47]. Ogbonnaya ES, Clarke G, Shanahan F, Dinan TG, Cryan JF, O’Leary OF, Adult Hippocampal Neurogenesis Is Regulated by the Microbiome, Biol Psychiatry 2015;78(4):e7–9. [DOI] [PubMed] [Google Scholar]
- [48]. Scott GA, Terstege DJ, Vu AP, Law S, Evans A, Epp JR, Disrupted Neurogenesis in Germ-Free Mice: Effects of Age and Sex, Front Cell Dev Biol 2020;8:407. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [49]. Mohle L, Mattei D, Heimesaat MM, Bereswill S, Fischer A, Alutis M, et al., Ly6C(hi) Monocytes Provide a Link between Antibiotic-Induced Changes in Gut Microbiota and Adult Hippocampal Neurogenesis, Cell Rep 2016;15(9):1945–56. [DOI] [PubMed] [Google Scholar]
- [50]. Ribeiro MF, Santos AA, Afonso MB, Rodrigues PM, Sa Santos S, Castro RE, et al., Diet-dependent gut microbiota impacts on adult neurogenesis through mitochondrial stress modulation, Brain Commun.fcaa 2020;2(2):165. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [51]. Kikusui T, Ichikawa S, Mori Y, Maternal deprivation by early weaning increases corticosterone and decreases hippocampal BDNF and neurogenesis in mice, Psychoneuroendocrinology 2009;34(5):762–72. [DOI] [PubMed] [Google Scholar]
- [52]. Sahay A, Hen R, Adult hippocampal neurogenesis in depression, Nat Neurosci 2007;10(9):1110–5. [DOI] [PubMed] [Google Scholar]
- [53]. Malberg JR, Eisch AJ, Nestler EJ, Duman RS, Chronic Antidepressant Treatment Increases Neurogenesis in Adult Rat Hippocampus, The Journal of Neuroscience 2000;20(24):9104–10. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [54]. Perera TD, Coplan JD, Lisanby SH, Lipira CM, Arif M, Carpio C, et al., Antidepressant-induced neurogenesis in the hippocampus of adult nonhuman primates, J Neurosci 2007;27(18):4894–901. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [55]. Madsen TM, Treschow A, Bengzon J, Bolwig TG, Lindvall O, Tingstrom A, Increased neurogenesis in a model of electroconvulsive therapy, Biol Psychiatry 2000;47(12):1043–9. [DOI] [PubMed] [Google Scholar]
- [56]. van Praag H, Christie BR, Sejnowski TJ, Gage FH, Running enhances neurogenesis, learning, and long-term potentiation in mice, Proc Natl Acad Sci U S A 1999;96(23):13427–31. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [57]. Boldrini M, Hen R, Underwood MD, Rosoklija GB, Dwork AJ, Mann JJ, et al., Hippocampal angiogenesis and progenitor cell proliferation are increased with antidepressant use in major depression, Biol Psychiatry 2012;72(7):562–71. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [58]. Boldrini M, Underwood MD, Hen R, Rosoklija GB, Dwork AJ, John Mann J, et al., Antidepressants increase neural progenitor cells in the human hippocampus, Neuropsychopharmacology 2009;34(11):2376–89. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [59]. Petrik D, Lagace DC, Eisch AJ, The neurogenesis hypothesis of affective and anxiety disorders: are we mistaking the scaffolding for the building? Neuropharmacology 2012;62(1):21–34. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [60]. Molendijk ML, Spinhoven P, Polak M, Bus BA, Penninx BW, Elzinga BM, Serum BDNF concentrations as peripheral manifestations of depression: evidence from a systematic review and meta-analyses on 179 associations (N=Mol Psychiatry 2014;19(7):791–800. [DOI] [PubMed] [Google Scholar]
- [61]. Nibuya M, Morinobu S, Duman RS, Regulation of BDNF and trkB mRNA in rat brain by chronic electroconvulsive seizure and antidepressant drug treatments, J Neurosci 1995;15(11):7539–47. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [62]. O’Mahony SM, McVey Neufeld KA, Waworuntu RV, Pusceddu MM, Manurung S, Murphy K, et al., The enduring effects of early-life stress on the microbiota-gut-brain axis are buffered by dietary supplementation with milk fat globule membrane and a prebiotic blend, Eur J Neurosci 2020;51(4):1042–58. [DOI] [PubMed] [Google Scholar]
- [63]. Bastiaanssen TFS, Gururajan A, van de Wouw M, Moloney GM, Ritz NL, Long-Smith CM, et al., Volatility as a Concept to Understand the Impact of Stress on the Microbiome, Psychoneuroendocrinology 2021;124:105047. [DOI] [PubMed] [Google Scholar]
- [64]. Cussotto S, Strain CR, Fouhy F, Strain RG, Peterson VL, Clarke G, et al., Differential effects of psychotropic drugs on microbiome composition and gastrointestinal function, Psychopharmacology (Berl) 2019;236(5):1671–85. [DOI] [PubMed] [Google Scholar]
- [65]. Sudo N, Chida Y, Aiba Y, Sonoda J, Oyama N, Yu XN, et al., Postnatal microbial colonization programs the hypothalamic-pituitary-adrenal system for stress response in mice, J Physiol 2004;558(Pt 1):263–75. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [66]. Kelly JR, Borre Y, C OB, Patterson E, El Aidy S, Deane J, et al., Transferring the blues: Depression-associated gut microbiota induces neurobehavioural changes in the rat, J Psychiatr Res 2016;82:109–18. [DOI] [PubMed] [Google Scholar]
- [67]. Bailey MT, Coe CL, Maternal separation disrupts the integrity of the intestinal microflora in infant rhesus monkeys, Dev Psychobiol 1999;35(2):146–55. [PubMed] [Google Scholar]
- [68]. Zijlmans MA, Korpela K, Riksen-Walraven JM, de Vos WM, de Weerth C, Maternal prenatal stress is associated with the infant intestinal microbiota, Psychoneuroendocrinology 2015;53:233–45. [DOI] [PubMed] [Google Scholar]
- [69]. Galley JD, Nelson MC, Yu Z, Dowd SE, Walter J, Kumar PS, et al., Exposure to a social stressor disrupts the community structure of the colonic mucosa-associated microbiota, BMC Microbiol 2014;14:189. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [70]. Bravo JA, Forsythe P, Chew MV, Escaravage E, Savignac HM, Dinan TG, et al., Ingestion of Lactobacillus strain regulates emotional behavior and central GABA receptor expression in a mouse via the vagus nerve, Proc Natl Acad Sci U S A 2011;108(38):16050–5. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [71]. Guo G, Jia KR, Shi Y, Liu XF, Liu KY, Qi W, et al., Psychological stress enhances the colonization of the stomach by Helicobacter pylori in the BALB/c mouse, Stress 2009;12(6):478–85. [DOI] [PubMed] [Google Scholar]
- [72]. Hemmings SMJ, Malan-Muller S, van den Heuvel LL, Demmitt BA, Stanislawski MA, Smith DG, et al., The Microbiome in Posttraumatic Stress Disorder and Trauma-Exposed Controls: An Exploratory Study, Psychosom Med 2017;79(8):936–46. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [73]. Ayaz M, Subhan F, Ahmed J, Khan AU, Ullah F, Ullah I, et al., Sertraline enhances the activity of antimicrobial agents against pathogens of clinical relevance, J Biol Res (Thessalon) 2015;22(1):4. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [74]. Lyte M, Daniels KM, Schmitz-Esser S, Fluoxetine-induced alteration of murine gut microbial community structure: evidence for a microbial endocrinology-based mechanism of action responsible for fluoxetine-induced side effects, PeerJ 2019;7:e6199. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [75]. Lukic I, Getselter D, Ziv O, Oron O, Reuveni E, Koren O, et al., Antidepressants affect gut microbiota and Ruminococcus flavefaciens is able to abolish their effects on depressive-like behavior, Transl Psychiatry 2019;9(1):133. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [76]. van Praag H, Shubert T, Zhao C, Gage FH, Exercise enhances learning and hippocampal neurogenesis in aged mice, J Neurosci 2005;25(38):8680–5. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [77]. Aimone JB, Wiles J, Gage FH, Potential role for adult neurogenesis in the encoding of time in new memories, Nat Neurosci 2006;9(6):723–7. [DOI] [PubMed] [Google Scholar]
- [78]. Kempermann G, Kuhn HG, Gage FH, More hippocampal neurons in adult mice living in an enriched environment, Nature 1997;386(6624):493–5. [DOI] [PubMed] [Google Scholar]
- [79]. Schloesser RJ, Lehmann M, Martinowich K, Manji HK, Herkenham M, Environmental enrichment requires adult neurogenesis to facilitate the recovery from psychosocial stress, Mol Psychiatry 2010;15(12):1152–63. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [80]. Duman CH, Schlesinger L, Russell DS, Duman RS, Voluntary exercise produces antidepressant and anxiolytic behavioral effects in mice, Brain Res 2008;1199:148–58. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [81]. Laske C, Banschbach S, Stransky E, Bosch S, Straten G, Machann J, et al., Exercise-induced normalization of decreased BDNF serum concentration in elderly women with remitted major depression, Int J Neuropsychopharmacol 2010;13(5):595–602. [DOI] [PubMed] [Google Scholar]
- [82]. Klempin F, Beis D, Mosienko V, Kempermann G, Bader M, Alenina N, Serotonin is required for exercise-induced adult hippocampal neurogenesis, J Neurosci 2013;33(19):8270–5. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [83]. Clarke SF, Murphy EF, O’Sullivan O, Lucey AJ, Humphreys M, Hogan A, et al., Exercise and associated dietary extremes impact on gut microbial diversity, Gut 2014;63(12):1913–20. [DOI] [PubMed] [Google Scholar]
- [84]. Bressa C, Bailen-Andrino M, Perez-Santiago J, Gonzalez-Soltero R, Perez M, Montalvo-Lominchar MG, et al., Differences in gut microbiota profile between women with active lifestyle and sedentary women, PLoS One 2017;12(2):e0171352. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [85]. Monda V, Villano I, Messina A, Valenzano A, Esposito T, Moscatelli F, et al., Exercise Modifies the Gut Microbiota with Positive Health Effects, Oxid Med Cell Longev 2017;2017:3831972. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [86]. Cavallucci V, Fidaleo M, Pani G, Nutrients and neurogenesis: the emerging role of autophagy and gut microbiota, Curr Opin Pharmacol 2020;50:46–52. [DOI] [PubMed] [Google Scholar]
- [87]. Lupori L, Cornuti S, Mazziotti R, Borghi E, Ottaviano E, Cas MD, et al., The gut microbiota of environmentally enriched mice regulates visual cortical plasticity, Cell Rep 2022;38(2):110212. [DOI] [PubMed] [Google Scholar]
- [88]. Lopez-Otin C, Blasco MA, Partridge L, Serrano M, Kroemer G, The hallmarks of aging, Cell 2013;153(6):1194–217. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [89]. Tran L, Greenwood-Van Meerveld B, Age-associated remodeling of the intestinal epithelial barrier, J Gerontol A Biol Sci Med Sci 2013;68(9):1045–56. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [90]. Konturek PC, Haziri D, Brzozowski T, Hess T, Heyman S, Kwiecien S, et al., Emerging role of fecal microbiota therapy in the treatment of gastrointestinal and extra-gastrointestinal diseases, J Physiol Pharmacol 2015;66(4):483–91. [PubMed] [Google Scholar]
- [91]. Kempermann G, Kuhn HG, Gage FH, Experience-induced neurogenesis in the senescent dentate gyrus, J Neurosci 1998;18(9):3206–12. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [92]. Klempin F, Kempermann G, Adult hippocampal neurogenesis and aging, Eur Arch Psychiatry Clin Neurosci 2007;257(5):271–80. [DOI] [PubMed] [Google Scholar]
- [93]. Diaz-Moreno M, Armenteros T, Gradari S, Hortiguela R, Garcia-Corzo L, Fontan-Lozano A, et al., Noggin rescues age-related stem cell lossin the brain of senescent mice with neurodegenerative pathology, Proc Natl Acad Sci U S A 2018;115(45):11625–30. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [94]. Kalamakis G, Brune D, Ravichandran S, Bolz J, Fan W, Ziebell F, et al., Quiescence Modulates Stem Cell Maintenance and Regenerative Capacity in the Aging Brain, Cell 2019;176(6):1407–19 e14. [DOI] [PubMed] [Google Scholar]
- [95]. Encinas JM, Michurina TV, Peunova N, Park JH, Tordo J, Peterson DA, et al., Division-coupled astrocytic differentiation and age-related depletion of neural stem cells in the adult hippocampus, Cell Stem Cell 2011;8(5):566–79. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [96]. Imayoshi I, Sakamoto M, Ohtsuka T, Takao K, Miyakawa T, Yamaguchi M, et al., Roles of continuous neurogenesis in the structural and functional integrity of the adult forebrain, Nat Neurosci 2008;11(10):1153–61. [DOI] [PubMed] [Google Scholar]
- [97]. Navarro Negredo P, Yeo RW, Brunet A, Aging and Rejuvenation of Neural Stem Cells and Their Niches, Cell Stem Cell 2020;27(2):202–23. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [98]. Kramer AF, Erickson KI, Colcombe SJ, Exercise, cognition, and the aging brain, J Appl Physiol 2006;101(4):1237–42. [DOI] [PubMed] [Google Scholar]
- [99]. Kramer AF, Hahn S, Cohen NJ, Banich MT, McAuley E, Harrison CR, et al., Ageing, fitness and neurocognitive function, Nature 1999;400(6743):418–9. [DOI] [PubMed] [Google Scholar]
- [100]. Biagi E, Franceschi C, Rampelli S, Severgnini M, Ostan R, Turroni S, et al., Gut Microbiota and Extreme Longevity, Curr Biol 2016;26(11):1480–5. [DOI] [PubMed] [Google Scholar]
- [101]. Biagi E, Rampelli S, Turroni S, Quercia S, Candela M, Brigidi P, The gut microbiota of centenarians: Signatures of longevity in the gut microbiota profile, Mech Ageing Dev 2017;165(Pt B):180–4. [DOI] [PubMed] [Google Scholar]
- [102]. Smith P, Willemsen D, Popkes M, Metge F, Gandiwa E, Reichard M, et al., Regulation of life span by the gut microbiota in the short-lived African turquoise killifish, Elife 2017;6:e27014. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [103]. Dinan TG, Cryan JF, Gut instincts: microbiota as a key regulator of brain development, ageing and neurodegeneration, J Physiol 2017;595(2):489–503. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [104]. Claesson MJ, Jeffery IB, Conde S, Power SE, O’Connor EM, Cusack S, et al., Gut microbiota composition correlates with diet and health in the elderly, Nature. 2012;488(7410):178–84. [DOI] [PubMed] [Google Scholar]
- [105]. Jackson MA, Jeffery IB, Beaumont M, Bell JT, Clark AG, Ley RE, et al., Signatures of early frailty in the gut microbiota, Genome Med 2016;8(1):8. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [106]. Odamaki T, Kato K, Sugahara H, Hashikura N, Takahashi S, Xiao JZ, et al., Age-related changes in gut microbiota composition from newborn to centenarian: a cross-sectional study, BMC Microbiol 2016;16:90. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [107]. Biagi E, Nylund L, Candela M, Ostan R, Bucci L, Pini E, et al., Through ageing, and beyond: gut microbiota and inflammatory status in seniors and centenarians, PLoS One 2010;5(5):e 10667. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [108]. Snyder DL, Pollard M, Wostmann BS, Luckert P, Life span, morphology, and pathology of diet-restricted germ-free and conventional Lobund-Wistar rats, J Gerontol 1990;45(2):B52–8. [DOI] [PubMed] [Google Scholar]
- [109]. Ghosh TS, Shanahan F, O’Toole PW, The gut microbiome as a modulator of healthy ageing. Nat Rev Gastroenterol Hepatol. 2022. [DOI] [PMC free article] [PubMed]
- [110]. Ait-Belgnaoui A, Colom A, Braniste V, Ramalho L, Marrot A, Cartier C, et al., Probiotic gut effect prevents the chronic psychological stress-induced brain activity abnormality in mice, Neurogastroenterol Motil 2014;26(4):510–20. [DOI] [PubMed] [Google Scholar]
- [111]. Mohammadi G, Dargahi L, Naserpour T, Mirzanejad Y, Alizadeh SA, Peymani A, et al., Probiotic mixture of Lactobacillus helveticus Rand Bifidobacterium longum Rattenuates hippocampal apoptosis induced by lipopolysaccharide in rats, Int Microbiol 2019;22(3):317–23. [DOI] [PubMed] [Google Scholar]
- [112]. Mohammadi G, Dargahi L, Peymani A, Mirzanejad Y, Alizadeh SA, Naserpour T, et al., The Effects of Probiotic Formulation Pretreatment (Lactobacillus helveticus Rand Bifidobacterium longum Ron a Lipopolysaccharide Rat Model, J Am Coll Nutr 2019;38(3):209–17. [DOI] [PubMed] [Google Scholar]
- [113]. Wilmanski T, Diener C, Rappaport N, Patwardhan S, Wiedrick J, Lapidus J, et al., Gut microbiome pattern reflects healthy ageing and predicts survival in humans, Nat Metab 2021;3(2):274–86. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [114]. Fransen F, van Beek AA, Borghuis T, Aidy SE, Hugenholtz F, van der Gaast-de Jongh C, et al., Aged Gut Microbiota Contributes to Systemical Inflammaging after Transfer to Germ-Free Mice, Front Immunol 2017;8:1385. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [115]. Robison LS, Albert NM, Camargo LA, Anderson BM, Salinero AE, Riccio DA, et al., High-Fat Diet-Induced Obesity Causes Sex-Specific Deficits in Adult Hippocampal Neurogenesis in Mice, eNeuro 2020;7(1). [DOI] [PMC free article] [PubMed] [Google Scholar]
- [116]. Lindqvist A, Mohapel P, Bouter B, Frielingsdorf H, Pizzo D, Brundin P, et al., High-fat diet impairs hippocampal neurogenesis in male rats, Eur J Neurol 2006;13(12):1385–8. [DOI] [PubMed] [Google Scholar]
- [117]. Klein C, Jonas W, Iggena D, Empl L, Rivalan M, Wiedmer P, et al., Exercise prevents high-fat diet-induced impairment of flexible memory expression in the water maze and modulates adult hippocampal neurogenesis in mice, Neurobiol Learn Mem 2016;131:26–35. [DOI] [PubMed] [Google Scholar]
- [118]. Parikh I, Guo J, Chuang KH, Zhong Y, Rempe RG, Hoffman JD, et al., Caloric restriction preserves memory and reduces anxiety of aging mice with early enhancement of neurovascular functions, Aging (Albany NY) 2016;8(11):2814–26. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [119]. Brandhorst S, Choi IY, Wei M, Cheng CW, Sedrakyan S, Navarrete G, et al., A Periodic Diet that Mimics Fasting Promotes Multi-System Regeneration, Enhanced Cognitive Performance, and Healthspan, Cell Metab 2015;22(1):86–99. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [120]. Graja A, Ghattassi K, Boudhina N, Bouzid MA, Chahed H, Ferchichi S, et al., Effect of Ramadan intermittent fasting on cognitive, physical and biochemical responses to strenuous short-term exercises in elite young female handball players. Physiol Behav. 2020:113241. [DOI] [PubMed]
- [121]. Ooi TC, Meramat A, Rajab NF, Shahar S, Ismail IS, Azam AA, et al., Intermittent Fasting Enhanced the Cognitive Function in Older Adults with Mild Cognitive Impairment by Inducing Biochemical and Metabolic changes: A 3-Year Progressive Study, Nutrients 2020;12(9):2644. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [122]. Singh R, Lakhanpal D, Kumar S, Sharma S, Kataria H, Kaur M, et al., Late-onset intermittent fasting dietary restriction as a potential intervention to retard age-associated brain function impairments in male rats, Age (Dordr) 2012;34(4):917–33. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [123]. Dal-Pan A, Pifferi F, Marchal J, Picq JL, Aujard F, Consortium R, Cognitive performances are selectively enhanced during chronic caloric restriction or resveratrol supplementation in a primate, PLoS One 2011;6(1):e16581. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [124]. Bellush LL, Wright AM, Walker JP, Kopchick J, Colvin RA, Caloric restriction and spatial learning in old mice, Physiol Behav 1996;60(2):541–7. [DOI] [PubMed] [Google Scholar]
- [125]. Ma L, Wang R, Dong W, Zhao Z, Caloric restriction can improve learning and memory in C57/BL mice probably via regulation of the AMPK signaling pathway, Exp Gerontol 2018;102:28–35. [DOI] [PubMed] [Google Scholar]
- [126]. Kuhla A, Lange S, Holzmann C, Maass F, Petersen J, Vollmar B, et al., Lifelong caloric restriction increases working memory in mice, PLoS One 2013;8(7):e68778. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [127]. Means LW, Higgins JL, Fernandez TJ, Mid-life onset of dietary restriction extends life and prolongs cognitive functioning, Physiol Behav 1993;54(3):503–8. [DOI] [PubMed] [Google Scholar]
- [128]. Lee J, Duan W, Mattson MP, Evidence that brain-derived neurotrophic factor is required for basal neurogenesis and mediates, in part, the enhancement of neurogenesis by dietary restriction in the hippocampus of adult mice, J Neurochem 2002;82(6):1367–75. [DOI] [PubMed] [Google Scholar]
- [129]. Lee J, Seroogy KB, Mattson MP, Dietary restriction enhances neurotrophin expression and neurogenesis in the hippocampus of adult mice, J Neurochem 2002;80(3):539–47. [DOI] [PubMed] [Google Scholar]
- [130]. Gibson GR, Hutkins R, Sanders ME, Prescott SL, Reimer RA, Salminen SJ, et al., Expert consensus document: The International Scientific Association for Probiotics and Prebiotics (ISAPP) consensus statement on the definition and scope of prebiotics, Nature Reviews Gastroenterology & Hepatology 2017;14:491–502. [DOI] [PubMed] [Google Scholar]
- [131]. Fernandez-Fernandez L, Comes G, Bolea I, Valente T, Ruiz J, Murtra P, et al., LMN diet, rich in polyphenols and polyunsaturated fatty acids, improves mouse cognitive decline associated with aging and Alzheimer’s disease, Behav Brain Res 2012;228(2):261–71. [DOI] [PubMed] [Google Scholar]
- [132]. Boehme M, van de Wouw M, Bastiaanssen TFS, Olavarria-Ramirez L, Lyons K, Fouhy F, et al., Mid-life microbiota crises: middle age is associated with pervasive neuroimmune alterations that are reversed by targeting the gut microbiome, Mol Psychiatry 2020;25(10):2567–83. [DOI] [PubMed] [Google Scholar]
- [133]. An L, Zhang YZ, Yu NJ, Liu XM, Zhao N, Yuan L, et al., The total flavonoids extracted from Xiaobuxin-Tang up-regulate the decreased hippocampal neurogenesis and neurotrophic molecules expression in chronically stressed rats, Prog Neuropsychopharmacol Biol Psychiatry 2008;32(6):1484–90. [DOI] [PubMed] [Google Scholar]
- [134]. Casadesus G, Shukitt-Hale B, Stellwagen HM, Zhu X, Lee HG, Smith MA, et al., Modulation of hippocampal plasticity and cognitive behavior by short-term blueberry supplementation in aged rats, Nutr Neurosci 2004;7(5-6):309–16. [DOI] [PubMed] [Google Scholar]
- [135]. Sarubbo F, Moranta D, Pani G, Dietary polyphenols and neurogenesis: Molecular interactions and implication for brain ageing and cognition, Neurosci Biobehav Rev 2018;90:456–70. [DOI] [PubMed] [Google Scholar]
- [136]. Petrella C, Strimpakos G, Torcinaro A, Middei S, Ricci V, Gargari G, et al., Proneurogenic and neuroprotective effect of a multi strain probiotic mixture in a mouse model of acute inflammation: Involvement of the gut-brain axis, Pharmacol Res 2021;172:105795. [DOI] [PubMed] [Google Scholar]
- [137]. Zhang Y, Fan Q, Hou Y, Zhang X, Yin Z, Cai X, et al., Bacteroides species differentially modulate depression-like behavior via gut-brain metabolic signaling, Brain Behav Immun 2022;102:11–22. [DOI] [PubMed] [Google Scholar]
- [138]. Spichak S, Guzzetta KE, O’Leary OF, Clarke G, Dinan TG, Cryan JF, Without a bug’s life: Germ-free rodents to interrogate microbiota-gut-neuroimmune interactions, Drug Discovery Today 2018;28:79–93. [Google Scholar]
- [139]. Wei GZ, Martin KA, Xing PY, Agrawal R, Whiley L, Wood TK, et al., Tryptophan-metabolizing gut microbes regulate adult neurogenesis via the aryl hydrocarbon receptor, Proc Natl Acad Sci U S A 2021;118(27):e2021091118. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [140]. Clarke G, Grenham S, Scully P, Fitzgerald P, Moloney RD, Shanahan F, et al., The microbiome-gut-brain axis during early life regulates the hippocampal serotonergic system in a sex-dependent manner, Mol Psychiatry 2013;18(6):666–73. [DOI] [PubMed] [Google Scholar]
- [141]. Yano JM, Yu K, Donaldson GP, Shastri GG, Ann P, Ma L, et al., Indigenous bacteria from the gut microbiota regulate host serotonin biosynthesis, Cell 2015;161(2):264–76. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [142]. Grill MF, Maganti RK, Neurotoxic effects associated with antibiotic use: management considerations, Br J Clin Pharmacol 2011;72(3):381–93. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [143]. Mehta RS, Lochhead P, Wang Y, Ma W, Nguyen LH, Kochar B, et al., Association of midlife antibiotic use with subsequent cognitivefunction in women, PLoS One 2022;17(3):e0264649. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [144]. Han S, Shannahan S, Pellish R, Fecal Microbiota Transplant: Treatment Options for Clostridium difficile Infection in the Intensive Care Unit, J Intensive Care Med 2016;31(9):577–86. [DOI] [PubMed] [Google Scholar]
- [145]. Sorbara MT, Pamer EG, Microbiome-based therapeutics. Nat Rev Microbiol. 2022. [DOI] [PubMed]
- [146]. D’Amato A, Di Cesare Mannelli L, Lucarini E, Man AL, Le Gall G, Branca JJV, et al., Faecal microbiota transplant from aged donor mice affects spatial learning and memory via modulating hippocampal synaptic plasticity- and neurotransmission-related proteins in young recipients, Microbiome 2020;8(1):140. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [147]. Kim N, Jeon SH, Ju IG, Gee MS, Do J, Oh MS, et al., Transplantation of gut microbiota derived from Alzheimer’s disease mouse model impairs memory function and neurogenesis in C57BL/6 mice, Brain Behav Immun 2021;98:357–65. [DOI] [PubMed] [Google Scholar]
- [148]. Boehme M, Guzzetta KE, Bastiaanssen TFS, van de Wouw M, Moloney GM, Gual-Grau A, et al., Microbiota from young mice counteracts selective age-associated behavioral deficits, Nature Aging 2021;1(8):666–76. [DOI] [PubMed] [Google Scholar]
- [149]. Ma X, Xiao W, Li H, Pang P, Xue F, Wan L, et al., Metformin restores hippocampal neurogenesis and learning and memory via regulating gut microbiota in the obese mouse model, Brain Behav Immun 2021;95:68–83. [DOI] [PubMed] [Google Scholar]
- [150]. Kazemi A, Noorbala AA, Azam K, Eskandari MH, Djafarian K, Effect of probiotic and prebiotic vs placebo on psychological outcomes in patients with major depressive disorder: A randomized clinical trial, Clin Nutr 2019;38(2):522–8. [DOI] [PubMed] [Google Scholar]
- [151]. Wallace CJK, Milev RV, The Efficacy, Safety, and Tolerability of Probiotics on Depression: Clinical Results From an Open-Label Pilot Study, Front Psychiatry 2021;12:618279. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [152]. Vauzour D, Dietary polyphenols as modulators of brain functions: biological actions and molecular mechanisms underpinning their beneficial effects, Oxid Med Cell Longev 2012;2012:914273. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [153]. Bayes J, Schloss J, Sibbritt D, Effects of Polyphenols in a Mediterranean Diet on Symptoms of Depression: A Systematic Literature Review, Adv Nutr 2020;11(3):602–15. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [154]. Anjaneyulu M, Chopra K, Kaur I, Antidepressant activity of quercetin, a bioflavonoid, in streptozotocin-induced diabetic mice, J Med Food 2003;6(4):391–5. [DOI] [PubMed] [Google Scholar]
- [155]. Kulkarni SK, Bhutani MK, Bishnoi M, Antidepressant activity of curcumin: involvement of serotonin and dopamine system, Psychopharmacology (Berl) 2008;201(3):435–42. [DOI] [PubMed] [Google Scholar]
- [156]. Bouayed J, Polyphenols: A Potential New Strategy for the Prevention and Treatment of Anxiety and Depression, Current Nutrition & Food Science 2010;6:13–8. [Google Scholar]
- [157]. Parletta N, Zarnowiecki D, Cho J, Wilson A, Bogomolova S, Villani A, et al., A Mediterranean-style dietary intervention supplemented with fish oil improves diet quality and mental health in people with depression: A randomized controlled trial (HELFIMED), Nutr Neurosci 2019;22(7):474–87. [DOI] [PubMed] [Google Scholar]
- [158]. Ghosh TS, Rampelli S, Jeffery IB, Santoro A, Neto M, Capri M, et al., Mediterranean diet intervention alters the gut microbiome in older people reducing frailty and improving health status: the NU-AGE 1-year dietary intervention across five European countries, Gut 2020;69(7):1218–28. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [159]. Grundy T, Toben C, Jaehne EJ, Corrigan F, Baune BT, Long-term omega-3 supplementation modulates behavior, hippocampal fatty acid concentration, neuronal progenitor proliferation and central TNF-alpha expression in 7 month old unchallenged mice. Frontiers in Cellular Neuroscience. 2014;8. [DOI] [PMC free article] [PubMed]
- [160]. Beltz BS, Tlusty MF, Benton JL, Sandeman DC, Omega-3 fatty acids upregulate adult neurogenesis, Neurosci Lett 2007;415(2):154–8. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [161]. Borsini A, Stangl D, Jeffries AR, Pariante CM, Thuret S, The role of omega-3 fatty acids in preventing glucocorticoid-induced reduction in human hippocampal neurogenesis and increase in apoptosis, Transl Psychiatry 2020;10(1):219. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [162]. Donoso F, Egerton S, Bastiaanssen TFS, Fitzgerald P, Gite S, Fouhy F, et al., Polyphenols selectively reverse early-life stress-induced behavioural, neurochemical and microbiota changes in the rat, Psychoneuroendocrinology 2020;116:104673. [DOI] [PubMed] [Google Scholar]
- [163]. Egerton S, Donoso F, Fitzgerald P, Gite S, Fouhy F, Whooley J, et al., Investigating the potential of fish oil as a nutraceutical in an animal model of early life stress, Nutr Neurosci 2020;25(2):1–23. [DOI] [PubMed] [Google Scholar]
- [164]. van de Wouw M, Boehme M, Lyte JM, Wiley N, Strain C, O’Sullivan O, et al., Short-chain fatty acids: microbial metabolites that alleviate stress-induced brain-gut axis alterations, J Physiol 2018;596(20):4923–44. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [165]. Erny D, Dokalis N, Mezo C, Castoldi A, Mossad O, Staszewski O, et al., Microbiota-derived acetate enables the metabolic fitness of the brain innate immune system during health and disease, Cell Metab 2021;33(11):2260–76 e7. [DOI] [PubMed] [Google Scholar]
- [166]. Val-Laillet D, Guerin S, Coquery N, Nogret I, Formal M, Rome V, et al., Oral sodium butyrate impacts brain metabolism and hippocampal neurogenesis, with limited effects on gut anatomy and function in pigs, FASEB J 2018;32(4):2160–71. [DOI] [PubMed] [Google Scholar]
- [167]. Valvassori SS, Varela RB, Arent CO, Dal-Pont GC, Bobsin TS, Budni J, et al., Sodium Butyrate Functions as an Antidepressant and Improves Cognition with Enhanced Neurotrophic Expression in Models of Maternal Deprivation and Chronic Mild Stress, Curr Neurovasc Res 2014;11(4):359–66. [DOI] [PubMed] [Google Scholar]
- [168]. Matt SM, Allen JM, Lawson MA, Mailing LJ, Woods JA, Johnson RW, Butyrate and Dietary Soluble Fiber Improve Neuroinflammation Associated With Aging in Mice, Front Immunol 2018;9:1832. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [169]. Savignac HM, Corona G, Mills H, Chen L, Spencer JPE, Tzortzis G, et al., Prebiotic feeding elevates central brain derived neurotrophic factor, N-methyl-D-aspartate receptor subunits and D-serine, Neurochem Int 2013;63(8):756–64. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [170]. Williams S, Chen L, Savignac HM, Tzortzis G, Anthony DC, Burnet PWJ, Neonatal prebiotic (BGOS) supplementation increases the levels of synaptophysin, GluN2A-subunits and BDNF proteins in the adult rat hippocampus, Synapse 2016;70(3):121–5. [DOI] [PubMed] [Google Scholar]
- [171]. Karimipour M, Rahbarghazi R, Tayefi H, Shimia M, Ghanadian M, Mahmoudi J, et al., Quercetin promotes learning and memory performance concomitantly with neural stem/progenitor cell proliferation and neurogenesis in the adult rat dentate gyrus, Int J Dev Neurosci 2019;74:18–26. [DOI] [PubMed] [Google Scholar]
- [172]. Sawamoto A, Okuyama S, Amakura Y, Yoshimura M, Yamada T, Yokogoshi H, et al., 3,5,6,7,8,3 ’,4 ’-Heptamethoxyflavone Ameliorates Depressive-Like Behavior and Hippocampal Neurochemical Changes in Chronic Unpredictable Mild Stressed Mice by Regulating the Brain-Derived Neurotrophic Factor: Requirement for ERK Activation, International Journal of Molecular Sciences 2017;18(10). [DOI] [PMC free article] [PubMed] [Google Scholar]
- [173]. Okuyama S, Kotani Y, Yamamoto K, Sawamoto A, Sugawara K, Sudo M, et al., The peel of Citrus kawachiensis (kawachi bankan) ameliorates microglial activation, tau hyper-phosphorylation, and suppression of neurogenesis in the hippocampus of senescence-accelerated mice, Biosci Biotechnol Biochem 2018;82(5):869–78. [DOI] [PubMed] [Google Scholar]
- [174]. Lee Y, Jeon SJ, Lee HE, Jung IH, Jo YW, Lee S, et al., Spinosin, a C-glycoside flavonoid, enhances cognitive performance and adult hippocampal neurogenesis in mice, Pharmacol Biochem Behav 2016;145:9–16. [DOI] [PubMed] [Google Scholar]
- [175]. Lee S, Kim DH, Lee DH, Jeon SJ, Lee CH, Son KH, et al., Oroxylin A, a flavonoid, stimulates adult neurogenesis in the hippocampal dentate gyrus region of mice, Neurochem Res 2010;35(11):1725–32. [DOI] [PubMed] [Google Scholar]
- [176]. Jeon SJ, Rhee SY, Seo JE, Bak HR, Lee SH, Ryu JH, et al., Oroxylin Aincreases BDNF production by activation of MAPK-CREB pathway in ratprimary cortical neuronal culture, Neurosci Res 2011;69(3):214–22. [DOI] [PubMed] [Google Scholar]
- [177]. Erny D, Hrabe de Angelis AL, Jaitin D, Wieghofer P, Staszewski O, David E, et al., Host microbiota constantly control maturation and function of microglia in the CNS, Nat Neurosci 2015;18(7):965–77. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [178]. Sierra A, Encinas JM, Deudero JJ, Chancey JH, Enikolopov G, Overstreet-Wadiche LS, et al., Microglia shape adult hippocampal neurogenesis through apoptosis-coupled phagocytosis, Cell Stem Cell 2010;7(4):483–95. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [179]. Diaz-Aparicio I, Paris I, Sierra-Torre V, Plaza-Zabala A, Rodriguez-Iglesias N, Marquez-Ropero M, et al., Microglia Actively Remodel Adult Hippocampal Neurogenesis through the Phagocytosis Secretome, J Neurosci 2020;40(7):1453–82. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [180]. Ekdahl CT, Claasen JH, Bonde S, Kokaia Z, Lindvall O, Inflammation is detrimental for neurogenesis in adult brain, Proc Natl Acad Sci U S A 2003;100(23):13632–7. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [181]. Monje ML, Toda H, Palmer TD, Inflammatory blockade restores adult hippocampal neurogenesis, Science 2003;302(5651)1760–5. [DOI] [PubMed] [Google Scholar]
- [182]. Green HF, Nolan YM, Unlocking mechanisms in interleukin-1beta-induced changes in hippocampal neurogenesis–a role for GSK-3beta and TLX, Transl Psychiatry.e 2012;2:194. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [183]. Pawley LC, Hueston CM, O’Leary JD, Kozareva DA, Cryan JF, O’Leary OF, et al., Chronic intrahippocampal interleukin-1beta overexpression in adolescence impairs hippocampal neurogenesis but not neurogenesis-associated cognition, Brain Behav Immun 2020;83:172–9. [DOI] [PubMed] [Google Scholar]
- [184]. Luczynski P, McVey Neufeld KA, Oriach CS, Clarke G, Dinan TG, Cryan JF, Growing up in a Bubble: Using Germ-Free Animals to Assess the Influence of the Gut Microbiota on Brain and Behavior, Int J Neuropsychopharmacol 2016;19(8):pyw020. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [185]. Gonzalez-Perez G, Lamouse-Smith ES, Gastrointestinal Microbiome Dysbiosis in Infant Mice Alters Peripheral CD8(+) T Cell Receptor Signaling, Front Immunol 2017;8:265. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [186]. Yu AI, Zhao L, Eaton KA, Ho S, Chen J, Poe S, et al., Gut MicrobiotaModulate CD8 T Cell Responses to Influence Colitis-AssociatedTumorigenesis, Cell Rep 2020;31(1):107471. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [187]. Dillon SM, Lee EJ, Kotter CV, Austin GL, Gianella S, Siewe B, et al., Gut dendritic cell activation links an altered colonic microbiome to mucosal and systemic T-cell activation in untreated HIV-1 infection, Mucosal Immunol 2016;9(1):24–37. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [188]. Edelblum KL, Sharon G, Singh G, Odenwald MA, Sailer A, Cao S, et al., The Microbiome Activates CD4 T-cell-mediated Immunity to Compensate for Increased Intestinal Permeability, Cell Mol Gastroenterol Hepatol 2017;4(2):285–97. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [189]. Medina-Rodriguez EM, Madorma D, O’Connor G, Mason BL, Han D, Deo SK, et al., Identification of a Signaling Mechanism by Which the Microbiome Regulates Th17 Cell-Mediated Depressive-Like Behaviors in Mice, Am J Psychiatry 2020;177(10):974–90. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [190]. Ivanov II, Atarashi K, Manel N, Brodie EL, Shima T, Karaoz U, et al., Induction of intestinal Th17 cells by segmented filamentous bacteria, Cell 2009;139(3):485–98. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [191]. Walker TL, Schallenberg S, Rund N, Gronnert L, Rust R, Kretschmer K, et al., T Lymphocytes Contribute to the Control of Baseline Neural Precursor Cell Proliferation but Not the Exercise-Induced Up-Regulation of Adult Hippocampal Neurogenesis, Front Immunol 2018;9:2856. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [192]. Zarif H, Nicolas S, Guyot M, Hosseiny S, Lazzari A, Canali MM, et al., CD8(+) T cells are essential for the effects of enriched environment on hippocampus-dependent behavior, hippocampal neurogenesis and synaptic plasticity, Brain Behav Immun 2018;69:235–54. [DOI] [PubMed] [Google Scholar]
- [193]. Wolf SA, Steiner B, Akpinarli A, Kammertoens T, Nassenstein C, Braun A, et al., CD4-positive T lymphocytes provide a neuroimmunological link in the control of adult hippocampal neurogenesis, J Immunol 2009;182(7):3979–84. [DOI] [PubMed] [Google Scholar]
- [194]. Langrish CL, Chen Y, Blumenschein WM, Mattson J, Basham B, Sedgwick JD, et al., IL-23 drives a pathogenic T cell population that induces autoimmune inflammation, J Exp Med 2005;201(2):233–40. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [195]. Liu Q, Xin W, He P, Turner D, Yin J, Gan Y, et al., Interleukin-17 inhibits adult hippocampal neurogenesis, Sci Rep 2014;4:7554. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [196]. Beurel E, Harrington LE, Jope RS, Inflammatory T helper 17 cells promote depression-like behavior in mice, Biol Psychiatry 2013;73(7):622–30. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [197]. Suarez AN, Hsu TM, Liu CM, Noble EE, Cortella AM, Nakamoto EM, et al., Gut vagal sensory signaling regulates hippocampus function through multi-order pathways, Nat Commun 2018;9(1):2181. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [198]. Liu Y, Sanderson D, Mian MF, McVey Neufeld KA, Forsythe P, Loss of vagal integrity disrupts immune components of the microbiota-gut-brain axis and inhibits the effect of Lactobacillus rhamnosus on behavior and the corticosterone stress response, Neuropharmacology 2021;195:108682. [DOI] [PubMed] [Google Scholar]
- [199]. O’Leary OF, Felice D, Galimberti S, Savignac HM, Bravo JA, Crowley T, et al., GABAB(1) receptor subunit isoforms differentially regulate stress resilience, Proc Natl Acad Sci U S A 2014;111(42):15232–7. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [200]. Biggio F, Gorini G, Utzeri C, Olla P, Marrosu F, Mocchetti I, et al., Chronic vagus nerve stimulation induces neuronal plasticity in the rat hippocampus, Int J Neuropsychopharmacol 2009;12(9):1209–21. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [201]. Revesz D, Tjernstrom M, Ben-Menachem E, Thorlin T, Effects of vagus nerve stimulation on rat hippocampal progenitor proliferation, Exp Neurol 2008;214(2):259–65. [DOI] [PubMed] [Google Scholar]
- [202]. Gebhardt N, Bar KJ, Boettger MK, Grecksch G, Keilhoff G, Reichart R, et al., Vagus nerve stimulation ameliorated deficits in one-way active avoidance learning and stimulated hippocampal neurogenesis in bulbectomized rats, Brain Stimul 2013;6(1):78–83. [DOI] [PubMed] [Google Scholar]
- [203]. O’Leary OF, Ogbonnaya ES, Felice D, Levone BR, L CC, Fitzgerald P, et al., The vagus nerve modulates BDNF expression and neurogenesis in the hippocampus, Eur Neuropsychopharmacol 2018;28(2):307–16. [DOI] [PubMed] [Google Scholar]
- [204]. Yang LL, Millischer V, Rodin S, MacFabe DF, Villaescusa JC, Lavebratt C, Enteric short-chain fatty acids promote proliferation of human neural progenitor cells, J Neurochem 2020;154(6):635–46. [DOI] [PubMed] [Google Scholar]
- [205]. Stilling RM, van de Wouw M, Clarke G, Stanton C, Dinan TG, Cryan JF, The neuropharmacology of butyrate: The bread and butter of the microbiota-gut-brain axis? Neurochem Int 2016;99:110–32. [DOI] [PubMed] [Google Scholar]
- [206]. Dash PK, Orsi SA, Moore AN, Histone deactylase inhibition combined with behavioral therapy enhances learning and memory following traumatic brain injury, Neuroscience 2009;163(1):1–8. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [207]. Barichello T, Generoso JS, Simoes LR, Faller CJ, Ceretta RA, Petronilho F, et al., Sodium Butyrate Prevents Memory Impairment by Re-establishing BDNF and GDNF Expression in Experimental Pneumococcal Meningitis, Mol Neurobiol 2015;52(1):734–40. [DOI] [PubMed] [Google Scholar]
- [208]. Gheorghe CE, Martin JA, Manriquez FV, Dinan TG, Cryan JF, Clarke G, Focus on the essentials: tryptophan metabolism and the microbiome-gut-brain axis, Curr Opin Pharmacol 2019;48:137–45. [DOI] [PubMed] [Google Scholar]
- [209]. Jenkins TA, Nguyen JCD, Polglaze KE, Bertrand PP, Influence of Tryptophan and Serotonin on Mood and Cognition with a Possible Role of the Gut-Brain Axis, Nutrients 2016;8(1). [DOI] [PMC free article] [PubMed] [Google Scholar]
- [210]. Reigstad CS, Salmonson CE, Rainey JF, 3rd, Szurszewski JH, Linden DR, Sonnenburg JL, et al., Gut microbes promote colonic serotonin production through an effect of short-chain fatty acids on enterochromaffin cells, FASEB J 2015;29(4):1395–403. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [211]. Alenina N, Klempin F, The role of serotonin in adult hippocampal neurogenesis, Behav Brain Res 2015;277:49–57. [DOI] [PubMed] [Google Scholar]
- [212]. Benninghoff J, Gritti A, Rizzi M, Lamorte G, Schloesser RJ, Schmitt A, et al., Serotonin depletion hampers survival and proliferation in neurospheres derived from adult neural stem cells, Neuropsychopharmacology 2010;35(4):893–903. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [213]. Lauder JM, Krebs H, Serotonin as a differentiation signal in early neurogenesis, Dev Neurosci 1978;1(1):15–30. [DOI] [PubMed] [Google Scholar]
- [214]. Moors M, Bose R, Johansson-Haque K, Edoff K, Okret S, Ceccatelli S, Dickkopf 1 mediates glucocorticoid-induced changes in human neural progenitor cell proliferation and differentiation, Toxicol Sci 2012;125(2):488–95. [DOI] [PubMed] [Google Scholar]
- [215]. Odaka H, Numakawa T, Yoshimura A, Nakajima S, Adachi N, Ooshima Y, et al., Chronic glucocorticoid exposure suppressed the differentiation and survival of embryonic neural stem/progenitor cells: Possible involvement of ERK and PI3K/Akt signaling in the neuronal differentiation, Neurosci Res 2016;113:28–36. [DOI] [PubMed] [Google Scholar]
- [216]. Wong EY, Herbert J, Roles of mineralocorticoid and glucocorticoid receptors in the regulation of progenitor proliferation in the adult hippocampus, Eur J Neurosci 2005;22(4):785–92. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [217]. Moon M, Kim S, Hwang L, Park S, Ghrelin Regulates Hippocampal Neurogenesis in Adult Mice, Endocr J 2009;56(3):525–31. [DOI] [PubMed] [Google Scholar]
- [218]. Li E, Chung H, Kim Y, Kim DH, Ryu JH, Sato T, et al., Ghrelin directly stimulates adult hippocampal neurogenesis: implications for learning and memory, Endocr J 2013;60(6):781–9. [DOI] [PubMed] [Google Scholar]
- [219]. Chung H, Li E, Kim Y, Kim S, Park S, Multiple signaling pathways mediate ghrelin-induced proliferation of hippocampal neural stem cells, J Endocrinol 2013;218(1):49–59. [DOI] [PubMed] [Google Scholar]
- [220]. Chung H, Park S, Ghrelin regulates cell cycle-related gene expression in cultured hippocampal neural stem cells, J Endocrinol 2016;230(2):239–50. [DOI] [PubMed] [Google Scholar]
- [221]. Avraham Y, Davidi N, Lassri V, Vorobiev L, Kabesa M, Dayan M, et al., Leptin induces neuroprotection neurogenesis and angiogenesis after stroke, Curr Neurovasc Res 2011;8(4):313–22. [DOI] [PubMed] [Google Scholar]
- [222]. Garza JC, Guo M, Zhang W, Lu XY, Leptin increases adult hippocampalneurogenesis in vivo and in vitro, J Biol Chem 2008;283(26):18238–47. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [223]. Garza JC, Guo M, Zhang W, Lu XY, Leptin restores adult hippocampal neurogenesis in a chronic unpredictable stress model of depression and reverses glucocorticoid-induced inhibition of GSK-3beta/beta-catenin signaling, Mol Psychiatry 2012;17(8):790–808. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [224]. Perez-Gonzalez R, Antequera D, Vargas T, Spuch C, Bolos M, Carro E, Leptin induces proliferation of neuronal progenitors and neuroprotection in a mouse model of Alzheimer’s disease, J Alzheimers Dis 2011;24(Suppl 2):17–25. [DOI] [PubMed] [Google Scholar]
- [225]. Sui Y, Vermeulen R, Hokfelt T, Horne MK, Stanic D, Female mice lacking cholecystokinin 1 receptors have compromised neurogenesis, and fewer dopaminergic cells in the olfactory bulb, Front Cell Neurosci 2013;7:13. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [226]. Langmesser S, Cerezo-Guisado MI, Lorenzo MJ, Garcia-Marin LJ, Bragado MJ, CCK1 and 2 receptors are expressed in immortalized rat brain neuroblasts: intracellular signals after cholecystokinin stimulation, J Cell Biochem 2007;100(4):851–64. [DOI] [PubMed] [Google Scholar]
- [227]. Stanic D, Paratcha G, Ledda F, Herzog H, Kopin AS, Hokfelt T, Peptidergic influences on proliferation, migration, and placement of neural progenitors in the adult mouse forebrain, Proc Natl Acad Sci U S A 2008;105(9):3610–5. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [228]. Howell OW, Doyle K, Goodman JH, Scharfman HE, Herzog H, Pringle A, et al., Neuropeptide Y stimulates neuronal precursor proliferation in the post-natal and adult dentate gyrus, J Neurochem 2005;93(3):560–70. [DOI] [PubMed] [Google Scholar]
- [229]. Brooker GJ, Kalloniatis M, Russo VC, Murphy M, Werther GA, Bartlett PF, Endogenous IGF-1 regulates the neuronal differentiation of adult stem cells, J Neurosci Res 2000;59(3):332–41. [DOI] [PubMed] [Google Scholar]
- [230]. Niu X, Zhao Y, Yang N, Zhao X, Zhang W, Bai X, et al., Proteasome activation by insulin-like growth factor-1/nuclear factor erythroid 2-related factor 2 signaling promotes exercise-induced neurogenesis, Stem Cells 2019. [DOI] [PubMed] [Google Scholar]
- [231]. Aberg MA, Aberg ND, Hedbacker H, Oscarsson J, Eriksson PS, Peripheral infusion of IGF-I selectively induces neurogenesis in the adult rat hippocampus, J Neurosci 2000;20(8):2896–903. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [232]. Aberg MA, Aberg ND, Palmer TD, Alborn AM, Carlsson-Skwirut C, Bang P, et al., IGF-I has a direct proliferative effect in adult hippocampal progenitor cells, Mol Cell Neurosci 2003;24(1):23–40. [DOI] [PubMed] [Google Scholar]
- [233]. Faivre E, Gault VA, Thorens B, Holscher C, Glucose-dependent insulinotropic polypeptide receptor knockout mice are impaired in learning, synaptic plasticity, and neurogenesis, J Neurophysiol 2011;105(4):1574–80. [DOI] [PubMed] [Google Scholar]
- [234]. Forte N, Boccella S, Tunisi L, Fernandez-Rilo AC, Imperatore R, Iannotti FA, et al., Orexin-A and endocannabinoids are involved in obesity-associated alteration of hippocampal neurogenesis, plasticity, and episodic memory in mice, Nat Commun 2021;12(1):6137. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [235]. Khosravi Y, Seow SW, Amoyo AA, Chiow KH, Tan TL, Wong WY, et al., Helicobacter pylori infection can affect energy modulating hormones and body weight in germ free mice, Sci Rep 2015;5:8731. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [236]. Duca FA, Swartz TD, Sakar Y, Covasa M, Increased oral detection, but decreased intestinal signaling for fats in mice lacking gut microbiota, PLoS One 2012;7(6):e39748. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [237]. Schele E, Grahnemo L, Anesten F, Hallen A, Backhed F, Jansson JO, The gut microbiota reduces leptin sensitivity and the expression of the obesity-suppressing neuropeptides proglucagon (Gcg) and brain-derived neurotrophic factor (Bdnf) in the central nervous system, Endocrinology 2013;154(10):3643–51. [DOI] [PubMed] [Google Scholar]
- [238]. Pen J, Welling GW, Influence of the microbial flora on the amount of CCK8- and secretin21-27-like immunoreactivity in the intestinal tract of mice, Comp Biochem Physiol B 1983;76(3):585–9. [DOI] [PubMed] [Google Scholar]
- [239]. Woods SE, Leonard MR, Hayden JA, Brophy MB, Bernert KR, Lavoie B, et al., Impaired cholecystokinin-induced gallbladder emptying incriminated in spontaneous “black” pigment gallstone formation in germfree Swiss Webster mice, Am J Physiol Gastrointest Liver Physiol 2015;308(4):G335–49. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [240]. Leeuwendaal NK, Cryan JF, Schellekens H, Gut peptides and the microbiome: focus on ghrelin, Curr Opin Endocrinol Diabetes Obes 2021;28(2):243–52. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [241]. Lichtenwalner RJ, Forbes ME, Bennett SA, Lynch CD, Sonntag WE, Riddle DR, Intracerebroventricular infusion of insulin-like growth factor-I ameliorates the age-related decline in hippocampal neurogenesis, Neuroscience 2001;107(4):603–13. [DOI] [PubMed] [Google Scholar]
- [242]. Pardo J, Abba MC, Lacunza E, Ogundele OM, Paiva I, Morel GR, et al., IGF-I Gene Therapy in Aging Rats Modulates Hippocampal Genes Relevant to Memory Function, J Gerontol A Biol Sci Med Sci 2018;73(4):459–67. [DOI] [PubMed] [Google Scholar]
- [243]. Morais LH, Golubeva AV, Moloney GM, Moya-Perez A, Ventura-Silva AP, Arboleya S, et al., Enduring Behavioral Effects Induced by Birth by Caesarean Section in the Mouse, Curr Biol 2020;30(19):3761–74 e6. [DOI] [PubMed] [Google Scholar]
- [244]. Al Nabhani Z, Dulauroy S, Marques R, Cousu C, Al Bounny S, Dejardin F, et al., A Weaning Reaction to Microbiota Is Required for Resistance to Immunopathologies in the Adult, Immunity 2019;50(5):1276–88 e5. [DOI] [PubMed] [Google Scholar]
- [245]. Vogt NM, Kerby RL, Dill-McFarland KA, Harding SJ, Merluzzi AP, Johnson SC, et al., Gut microbiome alterations in Alzheimer’s disease, Sci Rep 2017;7(1):13537. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [246]. Dohm-Hansen S, Donoso F, Lucassen PJ, Clarke G, Nolan YM, The gut microbiome and adult hippocampal neurogenesis: A new focal point for epilepsy? Neurobiol Dis 2022;170:105746. [DOI] [PubMed] [Google Scholar]
- [247]. Toda T, Parylak SL, Linker SB, Gage FH, The role of adult hippocampal neurogenesis in brain health and disease, Mol Psychiatry 2019;24(1):67–87. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [248]. Park JC, Im SH, Of men in mice: the development and application of a humanized gnotobiotic mouse model for microbiome therapeutics, Exp Mol Med 2020;52(9):1383–96. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [249]. Krych L, Hansen CH, Hansen AK, van den Berg FW, Nielsen DS, Quantitatively different, yet qualitatively alike: a meta-analysis of the mouse core gut microbiome with a view towards the human gut microbiome, PLoS One 2013;8(5):e62578. [DOI] [PMC free article] [PubMed] [Google Scholar]
- [250]. Taupin P. BrdU immunohistochemistry for studying adult neurogenesis: paradigms, pitfalls, limitations, and validation. Brain Res Rev. 2007;53(1):198–214. [DOI] [PubMed] [Google Scholar]