Table 3. Sequence kernel association tests of low frequency and rare ENaC variants with blood pressure measures.
Gene. Chromosome:Start–End | Variants with MAF < 0.05 | Variants with MAF < 0.01 | Variants with 0.01 ≤ MAF < 0.05 | ||||
---|---|---|---|---|---|---|---|
Measure | n | p value | n | p value | n | p value | |
SCNN1A. 12:6346824–6379751 |
SBP | 3,972 | 0.02 | 3,859 | 0.03 | 113 | 0.07 |
DBP | 3,972 | 0.00004 | 3,859 | 0.0004 | 113 | 0.0007 | |
PP | 3,972 | 0.7 | 3,859 | 0.3 | 113 | 0.9 | |
MAP | 3,972 | 0.0002 | 3,859 | 0.002 | 113 | 0.002 | |
SCNN1B. 16:2329812–23381320 |
SBP | 12,334 | 0.02 | 11,925 | 0.04 | 409 | 0.04 |
DBP | 12,334 | 0.002 | 11,925 | 0.003 | 409 | 0.01 | |
PP | 12,334 | 0.3 | 11,925 | 0.3 | 409 | 0.04 | |
MAP | 12,334 | 0.003 | 11,925 | 0.006 | 409 | 0.01 | |
SCNN1D. 1:1280417–1292050 |
SBP | 2,405 | 0.0008 | 2,293 | 0.2 | 112 | 0.0005 |
DBP | 2,405 | 0.002 | 2,293 | 0.03 | 112 | 0.003 | |
PP | 2,405 | 0.003 | 2,293 | 0.04 | 112 | 0.005 | |
MAP | 2,405 | 0.0008 | 2,293 | 0.1 | 112 | 0.0007 | |
SCNN1G. 16:23184696–23216904 |
SBP | 4,093 | 0.5 | 4,022 | 0.3 | 71 | 0.6 |
DBP | 4,093 | 0.2 | 4,022 | 0.1 | 71 | 0.4 | |
PP | 4,093 | 0.06 | 4,022 | 0.1 | 71 | 0.09 | |
MAP | 4,093 | 0.5 | 4,022 | 0.2 | 71 | 0.8 | |
Combined (SCNN1A, SCNN1B, SCNN1G) |
SBP | 20,399 | 0.01 | 19,806 | 0.02 | 593 | 0.03 |
DBP | 20,399 | 0.0002 | 19,806 | 0.0004 | 593 | 0.004 | |
PP | 20,399 | 0.3 | 19,806 | 0.1 | 593 | 0.4 | |
MAP | 20,399 | 0.0006 | 19,806 | 0.001 | 593 | 0.005 | |
Combined (SCNN1A, SCNN1B, SCNN1D, SCNN1G) |
SBP | 22,099 | 0.01 | 705 | 0.006 | ||
DBP | 22,099 | 0.0002 | 705 | 0.001 | |||
PP | 22,099 | 0.08 | 705 | 0.14 | |||
MAP | 22,099 | 0.0009 | 705 | 0.001 |
p values < 0.00625 are significant