Abstract
Traumatic brain injury (TBI) is a leading cause of acquired epilepsy. TBI can result in a focal or diffuse brain injury. Focal injury is a result of direct mechanical forces, sometimes penetrating through the cranium, creating a direct lesion in the brain tissue and is visible during brain imaging as areas with contusion, laceration and hemorrhage. Focal lesions induce neuronal death and glial scar formation, and are present in 20–25% of all people who incurred a TBI. However, in the majority of TBI cases, injury is caused by acceleration-deceleration forces and subsequent tissue shearing, resulting in nonfocal, diffuse damage. A subpopulation of TBI patients continues to develop post-traumatic epilepsy (PTE) after a latency period of months or years. Currently, it is impossible to predict which patients will develop PTE and seizures in PTE patients are challenging to control, necessitating further research. Until recently, the field was limited to only two animal/rodent models with validated spontaneous post-traumatic seizures, both presenting with large focal lesions with massive tissue loss in the cortex and sometimes subcortical structures. In contrast to these approaches, it was determined that diffuse TBI induced using a modified weight drop model is sufficient to initiate development of spontaneous convulsive and non-convulsive seizures, even in the absence of focal lesions or tissue loss. Similarly to human patients with acquired post-traumatic epilepsy, this model presents with a latency period after injury before seizure onset. In this protocol the community will be provided with a new model of post-traumatic epilepsy, detailing how to induce diffuse non-lesional TBI followed by continuous long-term video-electroencephalographic animal monitoring over the course of several months. This protocol will detail animal handling, weight-drop procedure, electrode placement for two acquisition systems and frequent challenges encountered during each of the steps of surgery, postoperative monitoring and data acquisition.
Keywords: TBI, epilepsy, seizures, astrogliosis, EEG, mild tbi, concussion, diffuse TBI, posttraumatic epilepsy
SUMMARY:
This systematic protocol describes a new animal model of post-traumatic epilepsy after repetitive mild traumatic brain injury (TBI). The first part details steps for TBI induction using a modified weight-drop model. The second part provides instructions on the surgical approach for single- and multi-channel electroencephalographic (EEG) data acquisition systems.
INTRODUCTION:
Every year traumatic brain injury (TBI) affects an estimated 60 million people worldwide. Impacted individuals are at higher risk of developing epilepsy, which can manifest even years after the initial injury. Though severe TBIs are associated with a higher risk, even mild TBI increases an individual’s chance of developing epilepsy1–4. All TBIs can be classified as focal, diffuse, or a combination of both. Diffuse brain injury, present in many if not all TBIs, is a result of brain tissues of different densities shearing against each other due to acceleration-deceleration and rotational forces. By definition, diffuse injury only occurs in isolation in mild/concussive non-penetrating brain injury, in which no brain lesions are visible on computed tomography scans5.
There are currently two critical problems in the management of patients who have, or are at risk of developing, post-traumatic epilepsy (PTE). The first is that once PTE has manifested, seizures are resistant to available anti-epileptic drugs (AEDs)6. Secondly, AED’s are equally ineffective at preventing epileptogenesis, and there are no effective alternative therapeutic approaches. In order to address this deficit and find better therapeutic targets and candidates for treatment, it will be necessary to explore new cellular and molecular mechanisms at the root of PTE6.
One of the prominent features of post-traumatic epilepsy is the latent period between the initial traumatic event and the onset of spontaneous, unprovoked, recurrent seizures. The events that occur within this temporal window are a natural focus for researchers as this time window might allow prevention of PTE altogether. Animal models are most commonly used for this research as they offer several distinct benefits, not the least of which is that continuous monitoring of human patients would be both impractical and costly over such potentially long spans of time. Additionally, cellular and molecular mechanisms at the root of epileptogenesis can only be explored in animal models.
Animal models with spontaneous post-traumatic seizures and epilepsy are preferred over models where seizures are induced after TBI by less physiologically relevant means, such as by chemoconvulsants or electric stimulation acutely, chronically or by kindling. Spontaneous post-traumatic seizure models test how TBI modifies the healthy brain network leading to epileptogenesis. Studies using additional stimulation after TBI assess how exposure to TBI reduces seizure threshold and alters susceptibility to seizures. The advantages of animal models with seizures induced chemically or with electric stimulation are in testing specific mechanisms of refractoriness to anti-epileptic drugs (AED) and efficacy of existing and novel AEDs. Yet, the degree of relevance and translation of these data in humans may be challenging7 due to the following: 1) mechanisms of seizures may be different from those induced by TBI alone; 2) not all of these models lead to spontaneous seizures7; 3) lesions created by the convulsant agent itself, by the cannula required for its delivery or by stimulating electrode placement in depth structures (as hippocampus or amygdala) can already cause increased seizure susceptibility and even hippocampal epileptiform field potentials7. Furthermore, some convulsant agents, i.e. kainic acid, produce direct hippocampal lesions and sclerosis which is not typical after diffuse TBI.
Until recently, only two animal models of post-traumatic epilepsy existed: controlled cortical impact (CCI, focal) or fluid percussion injury (FPI, focal and diffuse)8. Both models result in large focal lesions alongside tissue loss, hemorrhage and gliosis in rodents8. These models mimic post-traumatic epilepsy induced by large focal lesions. A recent study demonstrated that repeated (3x) diffuse TBI is sufficient for the development of spontaneous seizures and epilepsy in mice even in the absence of focal lesions9 adding a third rodent PTE model with confirmed spontaneous recurrent seizures. This new model mimics cellular and molecular changes induced by diffuse TBI, better representing the human population with mild, concussive TBIs. In this model, the latent period of three weeks or more before seizure onset and emergence of late spontaneous, recurrent seizures allow investigating the root causes of post-traumatic epileptogenesis, test the efficacy of preventive approaches and new therapeutic candidates after the onset of seizures and has potential for development of biomarkers of post-traumatic epileptogenesis as approximately half of the animals develop post-traumatic epilepsy.
The choice of animal model for the study of post-traumatic epilepsy depends on the scientific question, the type of brain injury investigated, and what tools will be utilized to determine the underlying cellular and molecular mechanisms. Ultimately, any model of post-traumatic epilepsy must demonstrate both the emergence of spontaneous seizures after TBI, and an initial latency period in a subset of TBI animals (as not all patients who incurred a TBI go on to develop epilepsy). To do this, electroencephalography (EEG) with simultaneous video acquisition is used. Understanding the technical aspects behind data acquisition hardware and approaches is critical for accurate data interpretation. The critical hardware aspects include the type of recording system, type of electrodes (screw or wire lead) and material they are made of, synchronized video acquisition (as part of EEG system or third party) and properties of the computer system. It is imperative to set the appropriate acquisition parameters in any type of system depending on study goal, EEG events of interest, further analysis method and sustainability of data storage. Lastly, the method of electrode configuration (montage) has to be considered as each has advantages and disadvantages, and will affect the data interpretation.
This protocol details how to use the modified Marmarou weight-drop model10,11 to induce diffuse injury resulting in spontaneous, unprovoked, recurrent seizures and describes surgical approaches to acquire a single- and multi-channel continuous, synchronized video electroencephalography (EEG) using monopolar, bipolar or mixed montage.
PROTOCOL:
All animal procedures described in this protocol were performed in accordance with the Institutional Animal Care and Use Committee (IACUC) of Virginia Tech and in compliance with the National Institutes of Health’s ‘Guide for the Care and Use of Laboratory Animals’.
2. Animal handling protocol
This protocol is intended to habituate the animals, ordered from a vendor, to the facility after arrival, and to condition them to being handled by the experimenter. This improves animal well-being by reducing stress and anxiety, and simplifies certain procedures that require handling animals, including inducing the TBI, post-operative monitoring and connecting the animal to the acquisition system.
When many animals are received from the vendor, they are ear-tagged and randomly assigned to an experimental group (TBI or Sham) and combined in cages of 2 to 5 animals. TBI animals have to be housed separate from Sham animals as Sham mice occasionally act aggressively toward mice that underwent TBI.
Handling day 1: (24–48 hours after ear-tagging). Prepare the sheet for logging animal ear tag, date of birth, date of handling day, animal weight during the handling day, duration of the handling and a section for comments and observations.
Gently cup the animal using both hands. Do not grab animal by the tail as it induces defense mechanisms and a stress response.
Check and record the eartag of the animal.
Place the animal in the container on the weight scale and record the weight.
Gently cup the animal with both hands again and handle it in your hands for 1 minute allowing it to move and explore within your hands. Perform this over a bench in the procedure room and be careful to not drop the animal on the floor.
After 1 minute of handling place the animal back to its cage.
Repeat steps 3–7 for other animals in the cage.
Handling day 2: (the following day). Same preparation as in Steps 2–5.
Gently cup the animal with both hands again and handle it in your hands for 2 minutes allowing it to move and explore within your hands. Perform this over a bench in the procedure room and be careful to not drop the animal on the floor.
After 2 minute handling place the animal back into its cage.
Repeat steps 10–11 for other animals in the cage.
Handling day 3: (the following day). Same preparation as in Steps 2–5.
Gently cup the animal with both hands again and handle it in your hands for 4 minutes allowing it to move and explore within your hands. Perform this over a bench in the procedure room and be careful to not drop the animal on the floor.
After 4 minute handling place the animal back into its cage.
Repeat steps 14–15 for other animals in the cage.
Handling day 4: Control Day (1 week from handling day 1). Same preparation as in Steps 2–5. NOTE: the control handling is to test the retention of the calm behavior after a 3 day handling protocol.
Gently cup the animal with both hands again and handle it for 4 minutes, allowing it to move and explore within your hands. Perform this over a bench in the procedure room and be careful to not drop the animal on the floor.
After 4 minute handling place the animal back into its cage.
Repeat steps 18–19 for other animals in the cage.
3. Weight drop procedure
Place the mouse in an induction chamber. Set the flow of oxygen and vacuum both to 1 liter/minute and level of isoflurane gas to 3–5%. Anesthetize mouse for 5 minutes.
Remove the mouse from an induction chamber and place it on the foam pad. Test for the absence of a response to toe or tail pinch.
Administer an analgesic (0.1 mg/kg buprenorphine) subcutaneously. If EEG surgery is performed that same day, administer buprenorphine subcutaneously in combination with the non-steroidal anti-inflammatory carprofen (5 mg/kg).
Administer sodium lactate solution 3μl per gram of animal’s weight subcutaneously before or after the last impact. Sodium lactate solution can be mixed with analgesics for quick administration in a single injection. NOTE: Sodium lactate solution contains a mixture of sodium chloride, potassium chloride, calcium chloride and sodium lactate in water. This step helps to replace fluids and electrolytes, aiding recovery.
Position the head of the mouse under the weight drop tube (Fig.1A) and place a flat stainless steel disc (1.3 cm in diameter, 1mm thick and of 880 mg weight) in the center of the head, between the line of the eyes and ears. NOTE: this disc diffuses the impact across the surface of the skull (Fig.1B).
Remove the pin in the weight drop tube to release the 100g weight rod from 50 cm height. To induce sham-injury as a control for animals receiving a weight-drop injury, remove the weight rod from the tube to prevent accidental release of the pin and weight drop. Repeat steps 1–11. NOTE: the animal’s head must be positioned flat so that the rod free-falls on the entire surface of the disc.
Place the animal on its back for recovery on a heating pad covered with sterile poly-lined absorbent towel. At this time, the animal is unconscious and the righting reflex recovery time (the time it takes the mouse to right itself from its back) can be measured as a readout for the time spent unconscious.
When the animal regains consciousness, place it in a clean cage that has been warmed on a heating pad, with recovery gel and a few moistened chow pieces to recover for 45 minutes. Make sure the cage litter does not get overheated, (this can occur when there is insufficient litter in the cage). Overheating the animal can prove just as great an obstacle to recovery as allowing the mouse to become too cold.
After 45 minutes, repeat steps 1–8 twice (omitting step 4: administration of analgesics and anti-inflammatory drugs).
Allow animals to recover for 1–2 hours if EEG electrode implantation surgery is performed on the same day.
Figure 1. The mouse model of repetitive diffuse TBI.

Panel A: weight drop device. a1 - weight drop tube; a2 - a 100g weight rod; a3 - pin holding the rod; a4 - string to raise the rod up if changing the height or removing the rod from the weight drop tube; a5 - foam pad for placing the animal under the weight drop tube. Panel B: b1 - the stainless steel disc is positioned in the center of the head between the line of the eyes and ears; b2-b3 - after visual confirmation that the animal’s head is in the flat position and the foam pad is moved, placing the animal’s head under the weight drop tube; b4 - pin holding the weight rod is released hitting the center of the stainless steel disc; b5 - mouse is placed on the sterile towel immediately after the impact and loss of consciousness is assessed by measuring the time it takes for the animal to recover and right itself.
4. Surgical field preparation for implantation of EEG electrodes
Autoclave surgical tools and screws prior to surgery. Clean the surgical gloves by spraying and rubbing with 70% ethanol before and after touching the animal, non-sterile materials and in between animals. Sterilize the surgical tools for 2–3 minutes in the bead sterilizer (see table of materials) between animals. Change the sterile drape before placing a new animal into the stereotactic apparatus. Ensure that the surgical field contains all necessary components for the surgery (Fig.2). The absence of an invasive surgical procedure to induce the TBI in this model has several advantages: 1) the timeline for implanting electrodes is flexible and may be either the same day or after a certain period of time; 2) animal’s recovery time is faster; 3) the cranium remains intact after TBI allowing more surface area and flexibility for implanting electrodes.
Table of materials
| Name of Material/Equipment | Company | Catalog Number | Comments/Description |
|---|---|---|---|
| 0.10” screw | Pinnacle Technology Inc., KS, USA | 8209 | 0.10 inch long stainless steel |
| 0.10” screw | Pinnacle Technology Inc., KS, USA | 8403 | 0.10 inch long with pre-soldered wire lead |
| 0.12” screw | Pinnacle Technology Inc., KS, USA | 8212 | 0.12 inch long stainless steel |
| 1EEG headmount | Invitro1 (subsidiary of Plastics One), VA, USA | MS333/8-A/SPC | 3 individually Teflon-insulated platinum iridium wire electrodes (twisted or untwisted, 0.005 inch diameter) extending below threaded plastic pedestal |
| 2EEG/1EMG headmount | Pinnacle Technology Inc., KS, USA | 8201 | 2EEG/1EMG channels |
| 3% hydrogen peroxide | Pharmacy | ||
| 3EEG headmount | Pinnacle Technology Inc., KS, USA | 8235-SM-C | custom 6-Pin Connector for 3EEG channels |
| Buprenorphine | Par Pharmaceuticals, Cos. Inc., Spring Valley, NY, USA | 060969 | |
| Buprenorphine | Par Pharmaceuticals, Cos. Inc., Spring Valley, NY, USA | 060969 | |
| C57BL/6 mice | Harlan/Envigo Laboratories Inc | male, 12–16 weeks old | |
| C57BL/6 mice | The Jackson Laboratory | male, 12–16 weeks old | |
| Carprofen | Zoetis Services LLC, Parsippany, NJ, USA | 026357 | NOTE: this drug is added during weight drop only if stereotactic electrode implantation will be performed on the same day |
| Chlorhexidine antiseptic | Pharmacy | ||
| Dental cement and solvent kit | Stoelting Co., USA | 51459 | |
| Drill | Foredom | HP4–917 | |
| Drill bit | Meisinger USA, LLC, USA | HM1–005-HP | 0.5 mm, Round, 1/4, Steel |
| Dry sterilizer | Cellpoint Scientific, USA | Germinator 500 | |
| EEG System 1 | Pinnacle Technology Inc., KS, USA | ||
| EEG System 2 | Pinnacle Technology Inc., KS, USA | ||
| Ethanol ≥70% | VWR, USA | 71001–652 | KOPTEC USP, Biotechnology Grade (140 Proof) |
| Eye ointment | Pro Labs Ltd, USA | Puralube Vet Ointment Sterile Ocular Lubricant available in general online stores and pharmacies | |
| Fluriso liquid for inhalation anesthesia | MWI Veterinary Supply Co., USA | 502017 | |
| Hair removal product | Church & Dwight Co., Inc., USA | Nair cream | |
| Isoflurane | MWI Veterinary Supply Co., USA | 502017 | |
| Povidone-iodine surgical solution | Purdue Products, USA | 004677 | Betadine |
| Rimadyl/Carprofen | Zoetis Services LLC, Parsippany, NJ, USA | 026357 | |
| Solder | Harware store | ||
| Soldering iron | Weller, USA | WP35 | ST7 tip, 0.8mm |
| Stainless steel disc | Custom made | ||
| Sterile cotton swabs | |||
| Fisher Scientific, USA | 22362178 | ||
| Cardinal Health, USA | 3520 | ||
| Tissue adhesive | 3M Animal Care Products, USA | 1469SB |
Figure 2. Surgical field preparation and EEG electrode placement scheme.

Autoclaved tools and necessary materials for surgery and electrode implantation are prepared before anesthetizing the animal to ensure availability of all required parts. This is a sterile zone and it is imperative to not contaminate this zone with non-sterile materials.
Anesthetize the mouse in 3–5% isoflurane gas in an induction chamber for 5 minutes.
Transfer the mouse from the induction chamber to the stereotactic apparatus and place it on a sterile drape on a heating pad with isoflurane gas and vacuum tubes connected to the nose cone.
Maintain body temperature at 37°C over the course of surgery. Place the temperature sensor such that it makes contact with the chest or abdominal wall of the mouse.
Fix the animal’s head in place using the ear bars.
Maintain the anesthesia at 1.5–3.5% isoflurane or at ~60 breaths/minute in surgical plane (with no response to toe or tail pinch).
Apply an eye ointment to the eyes of the animal to keep them lubricated throughout the surgery.
Administer a mixture of analgesics (0.1 mg/kg buprenorphine) and the non-steroidal anti-inflammatory (5 mg/kg carprofen) in a single injection subcutaneously unless the TBI was performed earlier during the day, in which case the animal already received analgesics and anti-inflammatories. Note: buprenorphine should be administered again, if the time between first TBI and EEG placement surgery exceeds 8 hours or if the animal displays signs of pain 8 hours after the first administration but should be given without the addition of carprofen.
Administer sodium lactate solution 3μl per gram of animal’s weight subcutaneously to replace fluids and electrolytes in the animal. NOTE: If surgery is performed immediately after the TBI, this step has to be timed properly: sodium lactate solution should be administered every 2 hours while the animal undergoes procedures and 2 hours from previous injection once after the surgery.
Remove the hair from the scalp using a hair removal product (see table of materials).
Before incision, disinfect the skin of the scalp with povidone-iodine surgical antiseptic solution and 70% ethanol in alternating swabs with sterile gauze pads in a circular motion 3 times (20 seconds per solution each time).
Using a scalpel make a rostral-caudal incision on the scalp midline from just above the eyes to the back of the head. This method of scalp opening is preferred over cutting the scalp off, as skin flaps can be sealed over or around the EEG-cap providing more stability. NOTE: when preparing the skull for implantation of the 3-EEG headmount, cutting the scalp off is required, as the size of the headmount will not allow for closure of the skin flaps over the headmount.
Expand the area of incision by applying small hemostats on opened skin borders. If any bleeding occurs after incision, remove it with sterile cotton gauze or swab.
Gently remove the periosteum (thin membrane over cranial bone) with a scalpel blade. If any bleeding occurs during this step press on bleeding site with a sterile cotton swab until it stops.
Use sterile cotton swabs to clean the cranium with hydrogen peroxide, but avoid touching the soft tissue surrounding the exposed cranial area. [Repeat this step until the cranium is cleaned from any soft tissue and has a whitish appearance].
Dry the cranium with a sterile gauze or cotton swab.
Step 12–15 are important for the proper fixation of electrodes and dental cement. Any soft tissue, non-cauterized bleeding and debris can cause infection, unstable headmount fixation, distorted or absent signal and loss of the implant within several days or weeks after surgery.
5. Electrode placement
5.3. Single EEG channel headmount implantation
Use high-speed drill (at ~5000–6000 rounds per minute (rpm) speed) to create 6 burr holes (3 for stability screws and 3 for electrodes) with a steel bit (0.5 mm, round, ¼) using the following stereotactic coordinates12: two anterior screws: AP: +1.5mm, ML: ±1.5mm; one posterior screw: AP: −5.2mm, ML: −1.5mm; recording electrodes: AP: −2.3mm, ML: ±2.7mm (Vin+ to the right and Vin− to the left). NOTE: Vin+ is an active electrode and Vin− is its reference electrode; ground electrode: AP: −5.2mm, ML: +1.5mm.
NOTE: abbreviations in the stereotactic coordinates represent spatial relationship and specify the distance (in mm) of the target from a specified landmark (in this case - bregma) at a given orientation of the heads: AP - anterior-posterior, ML - medial-lateral, DV - dorsal-ventral (DV is not applicable in this protocol since all electrodes are placed into the epidural space rather than in a certain structure within the brain) (Fig. 3).
Figure 3. Stereotactic landmarks and schematic representation of electrode placement using EEG System 1 and 2.

The top panel depicts methods of implanting 3 different headmounts described in this protocol. A – single-EEG channel, bipolar montage; B – two-EEG channels with common reference, bipolar montage and one EMG-channel; C – three-EEG channels, using monopolar (channel 1–2) and bipolar (channel 3) montage. The bottom panel depicts the headmounts and screws implanted as per scheme in the top panel. The 3 types of screws used in this protocol for two purposes: as stability screws (when used in Biopac Systems) or both stability and as electrode (when used in Pinnacle Technology system).
Place the 3 screws for enhanced stability of the head stage. Using a screwdriver make 1–1.5 turns for each screw to be fixed stably in the cranium. NOTE: Placing the screws deeper or even full length will create damage to the brain.
Insert the 1EEG headmount into a stereotactic holder arm and position the headmount such that the 3 electrodes are located along the cranial midline. In this configuration ground electrode and its respective opening on top of the headmount is located in the back, Vin+ electrode - in the middle, Vin− electrode - in the front. You can also make a mark on the headmount with a sharpie.
Bend each electrode 90° (in such a way that the end of each wire is bent downwards and is positioned above the corresponding burr hole), then measure out 1 mm length of the portion of the wire that is now perpendicular to the burr hole and trim the excess off (Fig.3). This will ensure that epidural placement of the electrodes (the electrodes should be barely touching the dura mater surface).
Lower the headmount and adjust all 3 electrodes to match the respective burr hole. For epidural recording, the electrodes must be placed above or barely touching the dura mater.
Prepare dental cement for application by mixing ½ scoop of powder with several drops of solvent. Use mixing spatula and stir until the final mixture is putty-like, tacky but malleable, and stiff enough to be properly condensed when placed on the animal cranium. Apply dental cement mixture covering all screws and electrodes and wait ~3–5 minutes for it to solidify. Make sure not to cover the plastic pedestal with dental cement as it will make it impossible to connect the animal to the commutator with a tether.
Release the hemostats holding skin flaps and close the incision by connecting the skin flaps around the plastic pedestal. Apply several drops of tissue adhesive (see table of materials) to seal the skin flaps.
Apply chlorhexidine antiseptic to the area around the implant to avoid infection.
If the animal is under anesthesia for longer than 2 hours after the previous injection of sodium lactate solution (given during the TBI induction), administer 3μl per gram of body weight subcutaneously. To maintain proper hydration of the animal, repeat the injection every 2 hours that the animal spends under anesthesia. After the surgery, give a final injection 2 hours from the previous injection. If surgery is less than 2 hours long, administer the final “recovery” dose of sodium lactate solution 2 hours from the first injection.
Remove the animal from the stereotactic apparatus and measure the animal’s weight after the EEG surgery as a reference for future monitoring, since the implant now adds weight and therefore the animal’s weight will be greater than before surgery.
Place the animal in a clean cage on a warm heating pad for recovery.
5.4. Two EEG and one EMG channels headmount implantation
Use bregma as a landmark for placement of the headmount.
Apply a small amount of tissue adhesive (see table of materials) to the bottom side of the 2EEG/1EMG headmount, avoiding the 4 screw holes and place the 2EEG/1EMG headmount on the surface of the cranium. NOTE: there are no specific coordinates for placement of this headmount. The headmount is 8 mm long and 5 mm wide which covers most of the cranial surface. Positioning the headmount with its front edge being approximately 3.0 mm anterior to bregma is optimal and provides good signal quality. Quick manual placement is necessary before the drop of tissue adhesive cures. Allow approximately 5 minutes for tissue glue to cure completely.
Use a sterile 23-gauge needle to create pilot holes for the screws through the 4 openings in the headmount. To accomplish this gently push the needle and slowly rotate until the tip of the needle penetrates the skull but without damaging the brain.
Remove any bleeding from the pilot holes using a sterile cotton swab.
Insert the 0.10” screws in the pilot holes, rotate them until each is fixed in the skull. This can be up to half of the screw length, but not the full length, as this would damage the dura and cortex. If the headmount is positioned so that there is a gap between the skull surface and rear end of the headmount - use two 0.12” screws in the posterior part.
Make small opening on the sides of the two-component epoxy (silver epoxy) twin-pack pouch. Take a double-sided spatula and use each side to scoop a small and equal amount of each component from the pouch and mix them together. Use only a small amount sufficient for a single surgery as the mixture solidifies within 20 minutes. Seal the sides of the pouch to prevent drying. NOTE: The silver-epoxy allows for proper electrical contact between screw and headmount and enhances the stability of the screws.
Apply a small amount of this mixture between screw head and screw hole, then tighten each screw until its head rests on the base of the implant. Ensure that no silver-epoxy is making contact between 2 screws since each screw serves as individual electrode and, to ensure an accurate signal, they should not make contact with another screw. If the silver-epoxy mixture was misplaced, there is a few second time window to carefully scoop out the excess to separate the connection.
Carefully bend both EMG leads from the posterior edge of the headmount to follow the contour of animals head and neck, and then insert them into the nuchal muscles.
Prepare dental cement for application by mixing ½ scoop of powder with several drops of solvent. Use mixing spatula and stir until the final mixture is putty-like, tacky but malleable, and stiff enough to be properly condensed when placed on the animal cranium. Apply dental cement mixture covering the entire headmount while avoiding covering the 6 pin holes, as this will make it impossible to connect the pre-amplifier. Wait ~3–5 minutes for the cement to solidify. Ensure that skin is not sealed to the headmount with dental cement.
Release the hemostats holding skin flaps and close the incision by connecting the skin flaps around the plastic pedestal. Apply several drops of tissue adhesive to seal the skin flaps. NOTE: if the skin incision was made longer to allow for straightening of the EMG wire leads, skin can be sealed with tissue adhesive or sutured. Sealing the skin with tissue adhesive is usually sufficient, however if during post-operative monitoring opening of the incision is observed, sutures are recommended instead.
Apply chlorhexidine antiseptic to the area around the implant to avoid infection.
Administer sodium lactate solution 3μl per gram of body weight subcutaneously to replace fluids and electrolytes if animal is under anesthesia for longer than 2 hours after the previous injection.
Remove the animal from the stereotactic apparatus and measure the animal’s weight after the EEG surgery as a reference for future monitoring, since the implant now adds weight and therefore the animal’s weight will be greater than before surgery.
Place the animal in a clean cage on a warm heating pad, with recovery gel and a few moistened chow pieces for recovery.
5.5. Three EEG channels headmount implantation
Use high-speed drill (at ~5000–6000 rpm speed) to create 6 burr holes (3 for stability screws and 3 for electrodes) with a steel bit (0.5 mm, round, ¼) using the following stereotactic coordinates12: ground and common reference for EEG1 and EEG2: AP −5.2mm, ML ±1.5mm; EEG1 and EEG2: AP −3.0mm, ML ±3.0mm; independent EEG3: AP −1.4mm, ML ±1.5mm.
Place the 6 screw electrodes into the burr holes. NOTE: Placing the screws deep or full length will create significant damage to the brain. Screw electrodes provide better stability of the headmount.
Prepare dental cement for application by mixing ½ scoop of powder with several drops of solvent. Use mixing spatula and stir until the final mixture is putty-like, tacky but malleable, and stiff enough to be properly condensed when placed on the animal cranium. Apply dental cement mixture covering the entire exposed surface of the cranium and each screw electrode. Ensure that skin is not sealed to the headmount with dental cement. Wait ~1–2 minutes for the cement to mildly solidify. No need to wait until full solidification before proceeding to the next step.
Turn on the soldering iron to heat up.
Place the 3EEG headmount in a stereotactic holder arm. NOTE: position the headmount such that the 6 wire leads positions match the position of the wire leads of each screw electrode.
Lower the headmount so that its ventral part rests on top of the dental cement.
Twist the wire of each lead from each of the screw electrodes with the corresponding wire lead of the headmount. NOTE: twisting the wrong wire leads will make data interpretation complicated or impossible.
Carefully trim the excess wire off using scissors.
Solder each twisted pair of wire for proper signal conduction. NOTE: Each pair of wire must make contact with another pair, otherwise signal quality and data interpretation will be compromised.
Bend each soldered pair of wire leads around the headmount, avoiding contact between each pair. NOTE: If the wire leads were not trimmed short enough it can be difficult to bend them around the headmount without touching another wire. In this case, bend one pair first, cover it with dental cement mixture, wait 1–2 minutes to solidify, then proceed with the next pair in the same fashion.
Finish covering all the wire with dental cement leaving only the black portion of the headmount exposed. NOTE: Be careful to not apply any dental cement powder or mixture to the top of the exposed portion of the headmount as any debris or cement in the holes will block the contact and will lead to either signal absence or noise.
Release the hemostats holding the skin flaps.
Apply chlorhexidine antiseptic to the area around the implant to avoid infection.
Administer sodium lactate solution 3μl per gram of body weight subcutaneously to replace fluids and electrolytes if animal has been under anesthesia for longer than 2 hours after the previous injection.
Remove the animal from the stereotactic apparatus and measure the animal’s weight after the EEG surgery as a reference for future monitoring. The implant now adds weight, and therefore the animal’s weight will be greater than before surgery.
Place the animal in a clean cage on a warm heating pad, with recovery gel and a few moistened chow pieces for recovery.
6. Connecting animals to the acquisition system.
Cup the animal with both hands to remove it from the acquisition cage and transfer it to the clean area with flat surface, like an Animal Transfer Station (ATS).
Gently grab the mouse by the skin on its back. NOTE: do not grab the animal by the tail as this causes distress.
Identify the opening in the EEG headmount corresponding to ground electrode and match the respective pin of the tether for proper connection. NOTE: reverse-connection of the tether from the commutator to the animal headmount will result in a different reading from the electrodes and potentially distorted waveforms.
Return the animal to the acquisition cage and connect the other end of the tether (EEG System 1) or pre-amplifier (EEG System 2) to the commutator. NOTE: When connecting the pre-amplifier (EEG System 2) to the tether from the commutator match the white marks on the ends of both tethers (reverse connection will result in permanent damage of the amplifier and requires repairs by the manufacturer, which is expensive).
Gently rotate the tether connecting the animal to the commutator to ensure the mechanism works properly and the animal can move freely.
7. EEG data acquisition settings
7.1. EEG System 1 acquisition parameters
Set sampling rate to 500 Hz, gain 5000, mode: Norm, 35 Hz LPN: off.
Set high pass filter: 0.5 Hz. NOTE: 100 Hz (low pass) is built-in and does not require manual input.
7.2. EEG System 2 acquisition parameters
Set sampling rate to 600 Hz, preamp gain 100, gain 1 (EEG1,2).
Set low pass filter: 100 Hz. NOTE: 1 Hz (high pass) is built-in and does not require manual input.
8. Video data acquisition settings
8.1. Acquisition parameters for EEG System 1
A third party video acquisition system is needed for obtaining simultaneous video data.
Set frame rate between 15 (minimum recommended) and 30 (maximum available) for appropriate video quality.
Set the resolution to 640×640.
Set type of compression: H.264H
8.2. Acquisition parameters for EEG System 2
This EEG system offers a video system and software which synchronize video and EEG data together in a single file for up to 4 animals (see table of materials).
Set frame rate between 15 (minimum recommended) and 30 (maximum available) for appropriate video quality.
Set the resolution to 640×480.
Set type of compression: WebM.
REPRESENTATIVE RESULTS:
The protocol outlined here describes the method for induction of a diffuse injury in isolation (e.g. in the absence a focal lesion) using a mouse model of repetitive diffuse TBI (Fig. 1). Figure 1A depicts the weight-drop device and its components (Fig.1A, a1-a5) used for induction of TBI in this model and crucial steps during the procedure (Fig. 1B, b1-b5).
Characteristics of this model include the lack of a focal lesion to the brain as a result of the TBI, loss of consciousness, a high survival rate, the emergence of late (>1 week of the TBI) onset spontaneous, unprovoked, recurrent seizures in a subset of TBI mice after a latency period of at least 3 weeks following TBI.
This protocol demonstrates detailed procedures for setting up a clean surgical field (Fig.2), provides a step-by step approach to implanting different electrode arrays (Fig.3) and includes a detailed guide on using two different EEG acquisition systems (Biopac Systems and Pinnacle Technology) for detecting seizures (Fig.4–5) in this model. The spectral power of a typical seizure indicates highest density in the frequency range of 20–40 Hz (Fig.4). The majority of the seizures in mice are convulsive with an average duration of 12–15 seconds. Only a small fraction of seizures are non-convulsive. A thorough comparison of the advantages and disadvantages when using either system is detailed in the Discussion section. Furthermore, in this protocol we demonstrated the timelines for seizure onset in animals after repetitive weight drop TBI showing the seizure clustering in some animals (Fig.6) which emphasizes the importance of acquiring continuous rather than intermittent recordings as this will ensure an accurate stratification of animals that develop spontaneous seizures after TBI from those that do not.
Figure 4. Spontaneous seizure acquired using EEG System 1.

Top panel – spontaneous seizure in a mouse 23 days after repeated weight drop TBI. Data acquired using 1EEG headmount. A – pre-ictal (pre-seizure) activity; B – ictal (seizure) activity; C – post-ictal (post-seizure) depression. Bottom panel – power spectrum density is calculated using custom script and software (see table of materials). Mean power – The average power of the power spectrum within the epoch (units: V2/Hz). Median frequency – frequency at which 50% of the total power within the epoch is reached (units: Hz). Mean frequency – frequency at which the average power within the epoch is reached (units: Hz). Spectral edge – frequency below which a user-specified percentage of the total power within the epoch is reached (units: Hz). Peak frequency – frequency at which the maximum power occurs during the epoch.
Figure 5. Spontaneous seizures acquired using EEG System 2.

A – Spontaneous non-convulsive (electrographic) seizure in a mouse 65 days after repeated weight drop TBI. Data acquired using 2EEG/1EMG headmount. B – Spontaneous convulsive seizure from a different (non-weight drop experiment). Data acquired using 3EEG headmount.
Figure 6. Seizure incidence timeline in mice after repeated weight drop TBI.

The earliest seizure was observed 3 weeks post-injury. Some animals develop clusters of seizures within the same day followed by several weeks without seizures. Animals were recorded up to 4 months after TBI.
Importantly, this protocol also discusses the advantages and disadvantages of rodent models of PTE and their applicability to represent a specific population of humans after TBI.
DISCUSSION:
In contrast to CCI and FPI models inducing either focal or combination of focal and diffuse injury, the model of repetitive diffuse TBI described in this protocol allows for the induction of diffuse injury in the absence of focal brain injury, and does not require scalp or cranial openings and the associated inflammation. An added benefit of the absence of craniectomy in this model is that it allows to not only implant the electrodes for chronic continuous EEG recording, but, alternatively, the creation of a thinned-skull cranial window for chronic in vivo 2-photon imaging of the animals before, immediately after, and repeatedly for days, weeks and even months following TBI as described in Shandra&Robel 201913.
Regardless of which animal model is chosen, the data acquisition approach adopted is a crucial element of any successful and comprehensive study. In rodent models of post-traumatic epilepsy the frequency of seizures is low14, ranging between 0.3–0.4 seizures per day9,15, and the latent period before the first seizure can last anywhere from days or weeks to even months after the initial TBI procedure. Lastly, in contrast to non-traumatic models, which have a generally higher incidence of seizures over a shorter period of time, on average only 9 to 50% of animals with TBI will have spontaneous seizures over a period of up to 6 months8,16. This suggests that meaningful studies require continuous long-term video-EEG recording.
The overarching goal of each animal model of TBI is to reproduce as closely as possible the different forms of TBI found in human patients, in order to better investigate the cellular and molecular mechanisms underlying PTE. Techniques in this protocol will help to facilitate the discovery of therapeutic targets, the testing of the efficacy and tolerability of new preventive and therapeutic candidates, and the development of reliable biomarkers/predictors of epilepsy following TBI.
Potential challenges during the weight-drop procedure:
Since the head is not fixed in a stereotactic frame, extra care must be taken to ensure a flat position of the head and metal plate. If the weighted rod hits the metal plate or head at an angle or if the weight slips off to the side of the mouse head, injury biomechanics will differ possibly resulting in milder or the absence of an injury. Note: In the past the metal plate was glued to the skull to minimize variability. It was however noticed that removal of the metal plate and glue from the mouse skull following weight drop, even if performed with care, induced damage to the meninges resulting in vascular damage and subsequent damage to the brain tissue even in Sham animals. Further, the incision requires healing, potentially involving a peripheral immune response, which might introduce variability. For these reasons it was chosen to omit gluing the metal plate to the skull. Animals may die with repeated (i.e. 3x in this protocol) injury. Mice below 25g of body weight may not tolerate repeated impacts. While single injuries almost never result in mortality, up to 7% of C57BL/6 animals die after repeated impacts9. Motor deficits can be observed in some animals. These deficits manifest as hindlimb paresis or gait abnormalities. This is usually a prognostic factor for poor recovery and it is recommended that the animal be sacrificed. Signs of pain or distress include weight loss, poor grooming, dehydration, increased anxiety, low or absent exploratory activity (hydrogel/recovery, chow and/or nestlet remain untouched). Rescue analgesia (0.1mg/kg of buprenorphine) can be administered subcutaneously every 8 hours for 3 days from TBI to alleviate the pain and prevent the animal from reaching the humane endpoint. Subcutaneous sodium lactate solution 3μl per gram of animal’s weight can be administered twice a day for hydration. Animals typically recover within 3 days after TBI. Use a five stage body condition score (BCS) for animal monitoring after experimental procedures: Stage 1 - mouse is emaciated (skeletal structures extremely prominent, vertebrae extremely segmented); Stage (2) - mouse is underconditioned (segmentation of vertebral column is evident, dorsal pelvic bones are readily palpable); (3) - mouse is well-conditioned (vertebrae and dorsal pelvis not prominent palpable with slight pressure); (4) - mouse is over-conditioned (spine is a continuous column, vertebrae palpable only with firm pressure); (5) - mouse is obese (mouse is smooth and bulky, bone structure disappears under flesh and subcutaneous fat). The humane endpoint is reached when the following is observed: BCS 1–2, 20% or more weight loss in an adult mouse compared to its pre-TBI weight, symptoms of pain or distress are not alleviated by analgesics, signs of self-mutilation, symptoms of dehydration, hypothermia, presence of neurologic deficits (abnormal gait or motor paresis). Several possible outcomes of substance administration should be taken into consideration. Buprenorphine injected subcutaneously reaches the first peak of its analgesic effect at 10 minutes after injection17. The first impact occurs seconds after buprenorphine is administered suggesting that the first measurement of the righting time is unlikely to be affected, however this cannot be fully excluded as a variable hence the experimenter is advised to exercise their own judgement. If the weight drop procedure is followed by stereotactic surgery and carprofen is administered it is important to note that carprofen is an anti-inflammatory agent that may affect seizure incidence, hence experimenter is advised to consider its use carefully.
Potential challenges during the surgery:
A 70% ethanol will lower the risk of contamination or infection however it will not result in sterile conditions. Alternatively, sterile surgical gloves may be used, although due to the fact that the stereotactic apparatus is not itself sterile, any manual manipulation will result in loss of the sterile condition of the gloves and hence spraying with 70% ethanol is required after contact with any unsterile material during surgery. Drilling through the cranium into the brain creates damage to the brain tissue and may cause profuse bleeding. Take extreme care when creating the burr holes. Fixing the hand drill in the stereotactic arm and gradually lowering it is preferred over drilling the holes while holding the drill manually. Electrodes and fixation screws may sink deeper than planned, injuring the dura (subdural placement) or the cortex (cortical placement). This may cause profuse bleeding and a focal lesion. The experimenter must avoid overheating of the animal during the surgery. If the temperature sensor is not fixed correctly it will not maintain the required 37°C temperature causing overheating, burns and sometimes animal’s death as a result. The eyes of the animal get dry, irritated or damaged during the surgery if not lubricated as soon as the animal is placed in the stereotactic apparatus.
Postoperative monitoring
Postoperative monitoring begins immediately after the procedure or surgery concludes. Observe the animal until it wakes up from anesthesia and monitor for presence/absence of any surgery-related complications, including bleeding or paresis. If bleeding is observed from the incomplete incision closure, anesthetize the animal, clean the bleeding site with chlorhexidine, perform wound closure as described above and return the animal to the recovery cage. Approximately 1–2 hours after surgery, the animal should be fully awake from anesthesia, moving freely in the cage with no signs of paresis or pain. The animal will begin grooming itself, which is why sealing the incision is necessary to prevent animal from opening it during grooming. Once the animal has recovered, transfer it to the cage/chamber that will be used for EEG data acquisition. This will allow the animal to get habituated to the new environment. This is especially important for long-term recording (for months). The animal cage must have a recovery gel (see table of materials), moistened chow, a nestlet and a water bottle. This will allow proper recovery and will give animal access to nutrients and water. Continue monitoring the animal daily. The assessment must include: a) visual inspection of animal’s behavior (signs of pain or distress including weight loss, poor grooming, increased anxiety, low or absent exploratory activity (hydrogel/recovery, chow and/or nestlet remain untouched) and proper healing of the incision area around the EEG implant; b) assessment of the BCS for signs of dehydration and malnutrition; c) weight of the animal. Administer sodium lactate solution (see table of materials) 3μl per gram of animal’s weight subcutaneously if animal shows signs of dehydration. Administer buprenorphine (0.1 mg/kg) subcutaneously if animal shows signs of pain or distress. If signs of pain persist buprenorphine can be repeated every 8 hours. Monitoring must be increased to twice a day if an animal is showing signs of pain and/or distress. Allow the animal to recover for at least 3 days following EEG surgery prior to connecting to the acquisition system via a tether. The humane endpoint criteria are the same as in potential challenges during weight drop procedure above.
Advantages and disadvantages of acquisition systems and headmounts
EEG System 1 with a single EEG channel headmount
The advantage of this system is the relatively low cost of the hardware, components and service. The simple and straightforward configuration allows users to customize the system to their preferences. Each differential amplifier provides a single EEG channel, although several differential amplifiers can be connected with each other increasing the number of channels for each animal. In this system, a single channel configuration per animal was used to acquire chronic long-term EEG recordings of 20 animals simultaneously. Post-traumatic seizures are typically generalized, and with a bilateral bipolar montage of the electrodes it is easy to detect this type of epileptiform activity. The disadvantage of this approach, however, is that it is impossible to reliably detect focality, lateralization, or the propagation of epileptiform activity as this would require several channels. Another potential challenge can be contamination of the single channel with noise over time, rendering it incapable of acquiring useful data from the animal. This can be overcome by combining 2 or more differential amplifiers, which doubles the number of channels per animal. Lastly, data acquired from a single channel are harder to distinguish from potential artifacts, and epileptiform activity is best be supported by video recordings of behavior. For this reason, all the recordings combined synchronized continuous video monitoring with EEG acquisition. A limitation of this system and its software is that it does not include the video acquisition system, and therefore requires a custom third party system for acquiring synchronous video.
EEG System 2 with multi-channel headmounts
The major advantage of this system is the high quality of the signal due to its pre-filtering of the acquired signal by the preamplifier (see table of materials) prior to being passed through the commutator to the amplifier. The amplifiers in this system allow for the acquisition of data in 3 channels in the following configurations: 2 EEG+1 EMG channels or 3 EEG channels (see table of materials). This allows for the detection not only of generalized activity but also, potentially, focal epileptiform activity. Another major advantage is that this system was designed specifically for animal research and hence offers a video recording system and software capable of synchronizing the EEG and video channels for up to 4 animals in a single file, which makes analysis easier and more convenient than the EEG system 1. This system is easy to use for acquisition of data for seizure and sleep analysis without any modifications to the system other than type of the headmount used. The 2EEG/1EMG headmount allows implanting the electrodes at fixed locations only, due to the size and configuration of the circuit board. The screw electrodes with wire leads in 3EEG headmounts allow flexibility in implanting at the desired location with the possibility to do either monopolar or bipolar acquisition depending on where reference electrode is placed. However, implanting of the 3EEG headmount requires soldering which adds more steps to the surgery and requires extra caution and precision. The connecting tethers and preamplifiers were specifically designed for small rodents like mice and immature rats and are thin, low weight cables that cause little pressure on the animals head. A disadvantage of the system is relatively high cost of the hardware, software, video license and components (preamplifiers and headmounts).
Significance and critical steps in EEG data acquisition
The commutator has a rotating mechanism allowing the tether to rotate depending on the direction of animal movement. If this mechanism fails, the animal’s movement will be restricted, which can result in removal of the EEG cap. Repeated surgery to place new electrodes can be attempted, however, this can be challenging or impossible if removal of the previous EEG cap caused damage to the skull and brain. The sampling rate for EEG data acquisition must be at least 2–2.5 times the highest frequency of interest. Higher sampling rates result in higher resolution of the data at the price of an increase in file size, which may become difficult to store and process when continuous recordings of multiple animals is acquired. Hence, optimize the sampling rate to the level that allows obtaining the necessary data without loss of quality while minimizing file sizes.
Significance and critical steps in video data acquisition
In rodents, as in humans, PTE can manifest with a wide variability in associated symptomatology and electrographic correlates, making it necessary to obtain a simultaneous video during EEG acquisition, in order to properly interpret and classify the observed EEG events. Interpretation of EEG data in the absence of synchronized video is particularly challenging when a single EEG channel is used. In this case, it can be difficult to determine if the EEG waveform is an artifact, unless other evidence (video) supports the classification as a seizure. Motion artifacts can appear similar to the electrographic pattern of the seizure and hence video with or without EMG confirmation is a requirement. While video recording is performed during both light and dark cycle, the video quality may not always be sufficient and clear during the dark hours. In addition, if the animal is turned away from the camera during the ictal-like EEG event, it may be challenging to assess the behavior. In those cases, acquiring an EMG signal in addition to EEG and video can solve the challenge by providing information about the muscle activity during milder behavioral seizures (with low motor components) or to confirm the lack of animal movement during absence-like spike-and-slow-wave discharges on the EEG. The potential challenges with the EMG channel are similar to the challenges of the EEG channels, such as becoming contaminated with noise, either by incorrect placement of electrodes, or the electrodes becoming loose (or losing surface contact) over the prolonged time of the recording. The use of video together with EEG analysis has two purposes: to confirm that an EEG event is not an artifact caused by the animals movement (exploratory behavior, drinking, chewing, scratching, stretching, grooming) or rapid/labored breathing, and to differentiate between convulsive and non-convulsive seizures. Use a modified Racine scale to characterize a convulsive or non-convulsive seizures: (0) – pure electrographic seizure without any identifiable motor manifestation; (1) – orofacial automatisms and head nodding; (2) – forelimb clonic jerk; (3) – bilateral forelimb clonus; (4) – forelimb clonus and rearing; (5) – forelimb clonus with rearing and falling. Make sure that in each video channel clearly shows the following: the entire surface with the animal in the cage, a label with animal identification number, water bottle tip, food, diet/recovery gel. To ensure availability of video acquisition during the dark hours - use infra-red night source (some cameras have built-in device or may require an additional part; see table of materials). Adjust the frame per second rate and image resolution. NOTE: the higher frame rate and resolution come at the cost of bigger file size. The main disadvantages of acquiring video during prolonged chronic continuous experiments include the need to store very large amounts of data, and the technical difficulties involved in processing the large files often acquired. The proficiency of the experimenter to effectively interpret the behavioral data together with EEG must also be considered.
ACKNOWLEDGMENTS:
This work was supported by R01 NS105807/NS/NINDS NIH HHS/United States and CURE based on a grant CURE received from the United States Army Medical Research and Materiel Command, Department of Defense (DoD), through the Psychological Health and Traumatic Brain Injury Research Program under Award No. W81XWH-15-2-0069. Ivan Zuidhoek is greatly appreciated for proofreading the manuscript.
Footnotes
A complete version of this article that includes the video component is available at http://dx.doi.org/10.3791/60360.
DISCLOSURES:
The authors have nothing to disclose.
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