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. 2022 Nov 28;17(11):e0278213. doi: 10.1371/journal.pone.0278213

Risk factors and survival in patients with COVID-19 in northeastern Brazil

Ana Tereza Fernandes 1,¤,*,#, Eujessika K Rodrigues 2,#, Eder R Araújo 1,#, Magno F Formiga 3,, Priscilla K Sá Horan 4,, Ana Beatriz Nunes de Sousa Ferreira 1,#, Humberto A Barbosa 5,, Paulo S Barbosa 2,
Editor: Claudio Andaloro6
PMCID: PMC9704671  PMID: 36441799

Abstract

Background

Knowledge about the epidemiology and risk factors surrounding COVID-19 contributes to developing better health strategies to combat the disease.

Objective

This study aimed to establish a survival analysis and identify the risk factors for patients with COVID-19 in an upper middle-income city in Brazil.

Methods

A retrospective cohort study was conducted with 280 hospitalized patients with COVID-19. The eCOVID platform provided data to monitor COVID-19 cases and help the communication between professionals.

Results

Age ≥ 65 years was associated with decreased survival (54.8%), and females had a lower survival rate than males (p = 0.01). Regarding risk factors, urea concentration (p<0.001), hospital length of stay (p = 0.002), oxygen concentration (p = 0.005), and age (p = 0.02) were associated with death.

Conclusion

Age, hospital length of stay, high blood urea concentration, and low oxygen concentration were associated with death by COVID-19 in the studied population. These findings corroborate with studies conducted in research centers worldwide.

Introduction

A transmissible disease caused by the novel coronavirus (SARS-CoV-2) has increased the number of severe acute respiratory syndrome cases worldwide since December 2019. Although efforts were made to determine the prevalence and factors associated with the epidemiology and severity of COVID-19 [1,2], more than 551 million people were infected worldwide until July 2022, and more than four million died. In the Americas, more than 164 million cases have been confirmed, whereas Brazil has accumulated more than 32 million cases [3].

Many countries have focused on defining and identifying strategies to fight the disease, prevent hospitalizations, and maintain economic activities [46]. One critical point of the disease is its form of presentation, which varies from asymptomatic to very mild or critical symptoms. Symptoms may also persist even after the acute phase, and individuals who initially did not report or have mild symptoms may evolve to sudden health decline or death [4,7,8].

In this sense, identifying factors predisposing to a high risk of hospitalization and death contribute to preventive measures, especially in developing countries facing difficulties in establishing an early diagnosis [8]. Therefore, this study describes the clinical and demographic characteristics, comorbidities, outcomes, survival, and factors associated with mortality of hospitalized patients with COVID-19 in an upper-middle-income city in Brazil.

Methods

Study design and participants

A retrospective cohort study was conducted with patients hospitalized due to COVID-19. Data were collected from the virtual platform eCOVID [2] between January-May 2021, developed by the Center for Strategic Health Technologies of the State University of Paraíba (NUTES/UEPB) in Brazil. Qualified professionals obtained data during the admission of patients in two hospitals in the city. The study was approved by the research ethics committee of the Universidade Estadual da Paraíba (approval number 4.241.971) and followed all ethical aspects involving research in humans and the Declaration of Helsinki. The informed consent form was waived by the ethics committee.

We included hospitalized patients of both sexes, aged 18 or over, diagnosed with COVID-19 using RT-PCR test (nasopharynx swab) [3], and with epidemiological history of COVID-19 and/or relevant clinical symptoms and serological parameters [9,10]. Patients whose COVID-19 diagnosis was discarded or outcomes were not recorded were excluded.

eCOVID platform

The eCOVID platform (ecovid.nutes.uepb.edu.br) was developed to store patient data (e.g., symptoms, comorbidities, vital signs, and laboratory and imaging exams) and facilitate communication among professionals treating patients with COVID-19. The platform allows remote assistance/communication among professionals working in the public Brazilian Unified Health System and the private sector. It also provides a database for epidemiological studies in the city where the study was conducted.

Variables and data collection

The following variables were included for data analysis: (1) profile of patients (age and sex); (2) diagnostic method (RT-PCR, immunoglobulin serology, or clinical-epidemiological); (3) symptoms presented on admission; (4) comorbidities; (5) vital signs; (6) laboratory and imaging exams; (7) risk stratification (subjectively collected by the medical doctor on admission); (8) hospital length of stay (hospital LOS), representing the total number of days of hospital stay; (9) length of invasive mechanical ventilation (IMV); and (10) clinical outcomes (discharge or death). We also obtained laboratory parameters from medical records, such as blood cell count and renal function (i.e., urea and creatinine concentration).

Data from the first (admission) to the last day of hospitalization (hospital discharge or death) were included for analysis. Vital signs, symptoms, and laboratory tests were considered if obtained on admission, while data regarding IMV, hospital LOS, and imaging tests were obtained when the outcome (discharge or death) was recorded.

Data analysis

All statistical analyses were conducted using the SPSS software, version 22 (SPSS, Inc., Chicago, IL, USA).

Categorical data were presented as relative frequency and numerical data as mean and standard error (SE). Patients were divided into survivors (patients discharged) and non-survivors (patients who died). Kolmogorov-Smirnov test assessed data normality, and the unpaired t-test compared data between groups. The chi-square test (Chi2) compared comorbidities, signs, and symptoms between groups. The Cox (proportional hazards) regression investigated the effects of age (< 65 and ≥ 65 years) and sex on death, whereas the survival analysis was performed using the Kaplan-Meier method. We also computed stepwise logistic regression models using the progressive selection technique (i.e., forward selection), in which only significant variables (p ≤ 0.05) and the predictive value remained in the model to identify those interfering with death. A significance level of p ≤ 0.05 was used for all analyses. Since the CDC stated that adults aged ≥ 65 years were at greater risk of COVID-19 complications and death (https://www.cdc.gov/aging/covid19-guidance.html), we have decided to use this cut-off point to stratify individuals into younger vs. older adults.

Missing data were managed using multiple imputations by replacing missing cells with random values from a statistical model based on data distribution and underlying assumptions regarding the nature of the missing data. Five imputed datasets were created, and the final estimates considered the average of different sets of imputed estimates and SE. The multiple imputation approach was chosen because it generates more accurate values than those generated by single imputation methods.

Results

A total of 365 patients were registered on the eCOVID platform; however, only the records of patients who had a positive RT-PCR test for COVID-19 (N = 280) were included in the study.

Clinical characteristics

Table 1 shows the general and clinical characteristics, symptoms, and comorbidities presented by the studied population. Among 280 hospitalized patients with COVID-19 included in our study, 192 were discharged, and 88 died. Approximately 54% of patients were males with mean age of 62.42 years (SE: 1.45). The most common comorbidities were systemic arterial hypertension (SAH) (53%), diabetes mellitus (67%), and obesity (24%). Moreover, 10% of patients had other types of heart disease. Dyspnea was the most reported symptom (82%), followed by cough (59%), fever (57%), muscular pain (22%), headache (15%), and anosmia (11%). Furthermore, 27% of patients were critically ill, and 57% were moderately ill on admission.

Table 1. Clinical characteristics, laboratory tests, signs and symptoms, and comorbidities.

Total (N = 280) Survivors (N = 192) Non-survivors (N = 88) p-value
Clinical characteristics
Sex (M/F) % 54/46 55/45 53/47 -
Age (years) 62.42 (1.45) 58.54 (1.22) 70.87 (1.64) <0.001*
RR (rpm) 23.07 (0.52) 22.51 (0.70) 24.29 (0.93) 0.150
HR (bpm) 86.48 (1.08) 87.82 (1.25) 83.56 (2.21) 0.094
SBP (mmHg) 132.7 (1.61) 134.78 (1.97) 128.18 (3.03) 0.068
SpO2 (%) 93 (0.37) 95 (0.27) 91 (0.94) <0.001*
Laboratory tests
Hemoglobin (g/dL) 12.68 (0.12) 12.83 (0.14) 12.36 (0.23) 0.077
Leukocytes (mm3) 11.47 (0.36) 10.30 (0.40) 14.03 (0.69) <0.001*
Platelets (mm3) 269.4 (6.86) 276 (8.57) 255 (11.87) 0.168
Creatinine (mg/dL) 1.46 (0.14) 1.32 (0.17) 1.76 (0.21) 0.127
Urea (mg/dL) 58.32 (46.47) 44.52 (2.43) 85.28 (6.51) <0.001*
Signs and Symptoms
Days to hospitalization (days) 8.40 (0.30) 8.79 (0.37) 7.55 (0.50) 0.057*
Dyspnea (%) 82 77 92 0.003
Cough (%) 59 60 58 0.925
Fever (%) 57 58 56 0.838
Muscular pain (%) 22 25 16 0.102
Headache (%) 15 15 14 0.800
Ageusia (%) 6 7 6 0.934
Anosmia (%) 11 15 5 0.019*
Runny nose (%) 2 3 2 0.991
Sore throat (%) 2 3 3 0.991
Asthenia (%) 10 12 6 0.126
Joint pain (%) 1 1 1 0.579
Nausea and/or vomit (%) 6 8 5 0.543
Fatigue (%) 2 4 1 0.433
Comorbidities††
Number of comorbidities 1.40 (0.67) 1.28 (0.07) 1.66 (0.12) 0.007*
SAH (%) 53 55 53 0.787
Diabetes (%) 67 30 39 0.178
Obesity (%) 24 23 27 0.522
COPD (%) 3 3 5 0.489
Others cardiopaties (%) 10 6 17 0.005
CKD (%) 4 4 5 0.977
Athsma (%) 2 3 2 0.804
Clinical Evolution
Hospital LOS (days) 6.02 (0.40) 5 (0.95) 8.81 (0.92) <0.001*
IMV duration (days) 1.74 (0.38) 0.53 (0.33) 4.38 (0.65) <0.001*

M: Male, F: Female, RR: Respiratory rate, HR: Heart rate, SBP: Systolic blood pressure, SpO2: Peripheral oxygen saturation, SAH: Systemic arterial hypertension, CKD: Chronic kidney disease, IMV: Invasive mechanical ventilation, LOS: Length of stay, COPD: Chronic obstructive pulmonary disease, rpm: Respiration per minute, bpm: Beats per minute, mmHg: Millimeters of mercury, %: Percentage, g: Grams, mg: Milligrams, dL: Deciliters, mm: Millimeters. Data presented as mean and standard error.

*Comparison between groups using Chi2 test (categorical variables) or unpaired t-test (numerical variables).

Proportions represent the number of people who presented that signs or symptoms.

††Proportions represent the number of people who had that comorbidity.

Age (p = 0.001), dyspnea (p = 0.003), and presence of other heart diseases (p = 0.005) were different between survivors and non-survivors. SAH was the most reported comorbidity in the non-survivor group (53%); this group also presented a high prevalence of cough (58%) and fever (56%).

We observed significant differences in SpO2 (p < 0.001), leukocyte count (p < 0.001), blood urea concentration (p < 0.001), anosmia (p = 0.019), number of associated comorbidities (p = 0.007), hospital LOS (p < 0.001), length of IMV (p < 0.001), and time between symptom onset and hospitalization (p = 0.057).

Survival analysis

The overall model, including age and sex as predictors, significantly improved the fit compared with the null model [χ2 (2) = 8.395, p = 0.01]. With increasing age, the hazard associated with death tended to be greater, even though this predictor was not significant (β = 0.424, p = 0.07). On the other hand, sex was an independent and significant predictor of mortality hazard (β = 0.461, p = 0.03), with time until death higher for males than females.

The survival analysis showed that 81.4% of patients aged < 65 years survived (Fig 1A). The survival rate of patients aged ≥ 65 years reduced to 54.8% and reached 50% in eleven days of hospitalization. In contrast, patients aged < 65 years reached a survival rate of 50% only on the 14th day of hospitalization (p = 0.04). Regarding sex, 67.7% of females and 69.3% of males survived. Females and males reached a 50% survival rate on the 12th and 17th days of hospitalization (p = 0.01), respectively (Fig 1B).

Fig 1.

Fig 1

Survival analysis by (a) age and hospital length of stay and (b) sex and hospital length of stay.

Risk factors associated with mortality

The stepwise logistic regression with a forward selection model included all numerical variables assessed (Table 2). When grouped, urea concentration (p < 0.001), hospital LOS (p = 0.002), SpO2 (p = 0.005), and age (p = 0.02) were better associated with death (Hosmer and Lemeshow test, p = 0.50). These variables were also different between groups. Fig 2 shows the ROC curve for the logistic regression model (AUC: 0.847, SE: 0.26, p < 0.00).

Table 2. Logistic regression of variables associated with death.

RISK OF DEATH
β p-value OR 95%CI
Age 0.02 0.02 1.02 1.00–1.05
SpO2 -0.11 0.005 0.89 0.82–0.96
Hospital LOS 0.10 0.002 1.10 1.03–1.18
Urea 0.03 <0.001 1.03 1.02–1.04
Constant 5.18 0.15 177.94

OR: Odds ratio, 95%CI: Confidence interval, SpO2: Peripheral oxygen saturation, LOS: Length of stay.

Fig 2. ROC curve for the logistic regression model.

Fig 2

Discussion

This study analyzed data from 280 hospitalized patients with COVID-19. The most common comorbidities were SAH, diabetes mellitus, and obesity, while most reported symptoms were dyspnea, cough, and fever. Age ≥ 65 years, low SpO2, high urea concentration, and prolonged hospital LOS were associated with increased risk of death in these patients. Moreover, females had a low survival rate when hospital LOS lasted more than eleven days.

Hospitalization due to COVID-19 is linked to worsening symptoms and increased risk of developing severe acute respiratory syndrome, which increased in Brazil between 2019 and 2020 [11]. Thus, identifying the clinical characteristics of patients who reach severe clinical conditions is a global concern.

Casas-Rojo et al. [12] analyzed data from 15,111 hospitalized patients in 150 hospitals in Spain and found a high prevalence of males in the sample (more than 57% aged > 60 years). These authors also observed that SAH (50.9%), obesity (21.2%), and diabetes mellitus (19.4%) were the most prevalent comorbidities, while the most reported signs and symptoms on admission were fever (63.4%), dry cough (58%), and dyspnea (57.6%). The results of our study were similar to those observed in the Spanish population [12], suggesting a pattern of clinical characteristics of hospitalized patients with severe COVID-19. Similarly, Cabrini et al. [13] evaluated data from 1,591 patients admitted to intensive care units in Italy and found that most hospitalized patients were males (82%) with SAH (49%). Furthermore, 89% of patients aged > 64 years needed IMV, increasing the mortality rate and hospital LOS [11]. In our study, 28% of patients received IMV, and those who died needed this type of support for a longer period (4.38 days). We highlight that prolonged hospital LOS was associated with a high risk of death.

The role of comorbidities in the worsening of COVID-19 has been discussed in some studies. A systematic review by Bradley et al. [14] showed associations between diabetes and COVID-19 severity, progression to acute respiratory distress syndrome, in-hospital mortality, and need for IMV. Persistent hyperglycemia caused by diabetes may worsen the inflammatory condition and immune system through oxidative stress. Other diseases were also prevalent in patients hospitalized due to COVID-19, such as SAH (prevalence of 16.37%) and other cardiovascular diseases (prevalence of 12.11%). As the immune system does not recognize the protection pathways for this new virus, individuals with pre-existing diseases may become more vulnerable to the severe forms of COVID-19 [15].

Although studies showed a high prevalence of SARS-CoV-2 or other types of coronavirus in males [16,17], the survival rate dropped faster in females than males and remained low until the end of the study. The survival analysis conducted by Salinas-Escudero et al. [17,18] with 133 Mexican patients showed a higher mortality in older females, especially those aged > 75 years. We also observed a higher mortality rate in females than males (32.3% vs. 30.7%) but without significant a difference between groups (p = 0.77), probably due to the high rate of deaths unrelated to sex particularities.

Studies showing age as a risk factor for worsening COVID-19 are frequent in the literature [12,13,19]. Li et al. [20] showed that age ≥ 65 years was associated with risk of severe disease and SAH. In our study, the survival rate in females aged ≥ 65 years declined to 50% when hospitalization was longer than eleven days. Also, the mean age of patients who died was 70.87 years, 12 years more than those discharged. Although age is still a controversial risk factor for COVID-19, its role in mortality is well established [21]. In this sense, are the aspects inherent to aging responsible for developing the disease, or is the presence of individual factors (e.g., immune response), comorbidities, and particular aspects of older adults that worsen the response to the viral infection? As already established, chronic diseases are common in older adults and may cause health [16] problems, especially during the COVID-19 infection.

Other factors, such as SpO2, hospital LOS, and blood urea concentration, were associated with mortality in our sample. Blood urea concentration was also associated with COVID-19 severity in the study by Ok et al. [22]. These authors observed that patients who progressed to severe disease had higher urea concentrations than those with moderate disease. Moreover, urea/creatinine ratio, white cell count, C-reactive protein, monocyte/lymphocyte ratio, and neutrophil/lymphocyte ratio were considered predictive factors for disease severity. These findings reinforce that early assessments may identify patients at risk of disease worsening.

Prolonged hospitalization, mainly in older adults, was associated with mortality. Thai et al. [19] showed that patients who died had a mean hospital LOS of eight days, whereas those who survived had a hospital LOS of six days. Prolonged hospitalization may impair muscle strength, quality of life, and functional capacity of older adults [23]. Also, the negative impacts of COVID-19 on physical, cognitive, and social well-being of patients who recovered from prolonged intensive care unit or hospital LOS due to acute respiratory illnesses are already recognized [24].

The limited access of the population to the COVID-19 diagnostic test and its acquisition and availability by the health system may be a potential limitation of this study. Specifically, during hospital stay, some patients were already outside the window of time to detect SARS-CoV-2 using RT-PCR. Therefore, the diagnosis was performed by identifying the immunoglobulins M and G and using clinical and/or radiological evolutions of the patient. The acceptance and use of the eCOVID platform can be considered another limitation of the study. We believe some professionals did not adhere to the platform, which may have caused losses in the registration of patients within hospital units that use the platform. Furthermore, the lack of information about signs and symptoms of COVID-19 may have delayed health care seeking. As a result, patients arrived at the hospital presenting advanced forms of the disease. In this sense, the Unified Health System should accelerate the care for those most vulnerable to developing the severe forms of the disease by mapping and referring symptomatic patients, older adults, and individuals with pre-existing comorbidities to care facilities; thus, avoiding hospitalizations and worse prognoses.

Conclusions

Age, hospital LOS, high blood urea concentration, and low SpO2 were associated with mortality by COVID-19 in the evaluated population. Considering that several variables associated with increased mortality are assessed at hospital admission, this study may guide the development of public health interventions to prevent the clinical evolution of COVID-19 to severe conditions. Furthermore, health professionals can assist and contribute to prevention by early identifying patients with severe COVID-19 in primary care.

Acknowledgments

The authors thank Probatus Academic Services for providing scientific language revision and editing.

Data Availability

The information about data availability is at link https://figshare.com/s/439d0d45b7b3e442728f.

Funding Statement

Yes.This study was financed by the Coordenação de Aperfeiçoamento de Pessoal de Nível Superior – Brasil (CAPES) (Finance Code CAPES EPIDEMIAS 09/2020-grand/award number:23038.013745/2020-69 to H.A.B) and Fundação de Apoio à Pesquisa do Estado da Paraíba – Brasil (FAPESQ) (Finance Code COVID-19 003/2020). The funders The funders had role in study design, decision to publish and preparation of the manuscript.

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Decision Letter 0

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22 Jun 2022

PONE-D-22-12861Risk factors and survival in patients with COVID-19 in northeastern Brazil.PLOS ONE

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When submitting your revision, we need you to address these additional requirements.

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2. Please include your full ethics statement in the ‘Methods’ section of your manuscript file. In your statement, please include the full name of the IRB or ethics committee who approved or waived your study, as well as whether or not you obtained informed written or verbal consent. If consent was waived for your study, please include this information in your statement as well. 

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[NO authors have competing interests]. 

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 This information should be included in your cover letter; we will change the online submission form on your behalf.

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Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Partly

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2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: No

Reviewer #2: Yes

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3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: No

Reviewer #2: Yes

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4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: No

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5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: This is an interesting work from colleagues from Brazil providing insights on epidemiology and risk factors of hospitalised COVID-19 patients.

I have several comments for authors to consider

1. Can you provide percentage of people who were discarded due to unavailability of outcomes? This is important so as to mitigate selection bias.

2. Data analysis: How was the multiple imputation performed? Which software/platform were used?

3. Page 6: what do you mean by "with death. studied outcomes"??

4. Why was the predictive accuracy, sensitivity and ROC of the regression model not calculated?

Did you also account for the multicollinearity while selecting for variables to be included in the multivariate model? Please provide details?

5. The manuscript needs significant editing for language and comprehension.

For example, what do you mean by, "the unfamiliarity of the population with signs and symptoms of COVID-19 may have delayed healthcare seeking" (page 12) - healthcare seeking?

6. Several aspects of the results have not been discussed. Please organise the discussion so as to highlight key points and provide supporting discussion from relevant literature previously reported, if available.

7. In the discussion, suggest also discussing briefly that previous studies have reported prexisting factors such as diabetes are also associated with worse outcomes in COVID-19 patients ((see a metaanalysis by Bradley et al J Diabetes 2022 PMID: 34939735)

8. In the Discussion, you may also provide some indications, based on the findings and experiences from this study, some strategies which may be useful for future. Obviously role of telemedicine may also be discussed including streamlining telemedicine care for both hospitalised and non-hospitalised patients (see PMID: 33796502)

9. If possible, please also provide the ROC figure of the final prognostic model.

Reviewer #2: Dear Author(s),

Thank you for your esteemed efforts in increasing our collective knowledge about the predictors (risk factors) of mortality in hospitalized COVID-19 patients.

Please consider the following points:

1. Abstract: the "background" subsection is so broad and does not convey the objective of the study. Please re-write it.

2. Abstract: add explanation for "hospital LOS"

3. "A transmissible disease (COVID-19) caused by the SARS-CoV-2 virus increased the number of severe acute respiratory syndrome (SARS) cases worldwide since December 2019."

This sentence is not lingustically sound. COVID-19 is not an abbreviation for "a transmissible disease". SARS-CoV-2 is not explained. SARS refers to SARS-CoV-1, so please do not use it here.

4. Introduction: do not use expressions like "to date". Use actual dates to be specific.

5. "The United States of America and Brazil correspond to 71% of cumulative cases of COVID-19 in the Americas (more than 46 million cases)3." How this sentence is useful for your narrative?! US and Brazil are the most populous countries in the region, so it makes sense that they will have the highest number of cases/fatalities.

6. Why did you the age of 65 years old as cut-off point for analysis?

7. How did you decide whether the patient was critically or moderately ill on admission? Which categorization scheme have you used? Please mention that in your Methods section.

8. Age (p = 0.001), dyspnea (p = 0.003), and presence of other heart diseases (p =0.005) were different between groups."

It is unclear which groups do you refer to?

9. In Table 1; you did not add percentages of signs and symptoms. Please add them.

10. In Table 1: you did not add percentages of comorbidities. Please add them.

11. According to your data, the difference between females and males in mortality (32.3% vs. 30.7%) is neither statisitically or clinically signifcant. I do not understand why you insisted to say that females had higher mortality risk than males. It is not true based on your data. Please fix this accross your manuscript.

12. In your limitations section, you did not reflect on your information source (eCOVID-19 platform). Is it mandatory that all hospitalized patients must be registered in this platform? If the answer is "No", then this is an obvious limitation of your dataset that makes it prone to selection bias.

13. Your study design can not be called "retrospective cohort study", because hisotical/retrospective cohort studies require at least two distinct groups of individuals/patients to be involved in the study from the begining. You did something like chart review not a cohort study.

You can not consider the dichtomoy of survivor vs. non-survivor as a justification for calling your study as a cohort because the ground idea of cohort designs is dividing the groups of individuals based on their exposure/predictor/independent variable not their outcome/result/dependent variable.

For the outcome-based comparisons, we perform case-control studies not cohort studies.

14. Your Discussion might benefit from reflecting on hospitalization-related complications:

https://doi.org/10.3390/jcm10040581

Sincerely,

**********

6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: No

**********

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.

PLoS One. 2022 Nov 28;17(11):e0278213. doi: 10.1371/journal.pone.0278213.r002

Author response to Decision Letter 0


1 Aug 2022

Thank you for your consideration and comments.

All adjustments were made to adapt to the journal's standards as requested by the editor in comments 1 to 4.

Below are responses to reviewers.

We would like to thank all considerations made by the reviewers. We clarified and modified the manuscript as suggested. We also appreciate the opportunity to send this new version for peer review.

Reviewer #1: This is an interesting work from colleagues from Brazil providing insights on epidemiology and risk factors of hospitalized COVID-19 patients.

I have several comments for authors to consider

1. Can you provide percentage of people who were discarded due to unavailability of outcomes? This is important so as to mitigate selection bias.

A total of 365 patients were registered on the eCOVID platform. Due to delays in seeking hospital care, lack of information, and unavailability of tests in Brazil, some patients may have undergone the exam outside the ideal window for virus identification. These patients were treated for COVID-19 but only based on the evolution of the clinical picture. We included only those records of patients who had a positive RT-PCR test for COVID-19 (N=280; 76.7%) since this was considered the gold standard for diagnosing COVID-19 worldwide at the time of data collection.

2. Data analysis: How was the multiple imputation performed? Which software/platform were used?

Thank you for your question. All statistical analyses were conducted using the SPSS statistical software, version 22 (SPSS, Inc., Chicago, IL, USA). Missing data were managed using multiple imputations by replacing missing cells with random values from a statistical model based on distribution and underlying assumptions on the nature of the missing data. Five imputed datasets were created, and the final estimates were the average of different sets of imputed estimates and standard errors. The multiple imputation approach was chosen because it generates more accurate values than those generated by single imputation methods.

The above information has also been included in the revised text.

3. Page 6: what do you mean by "with death. studied outcomes"??

Thank you for the comment. This typo was corrected in the new version.

4. Why was the predictive accuracy, sensitivity and ROC of the regression model not calculated? Did you also account for the multicollinearity while selecting for variables to be included in the multivariate model? Please provide details?

Thank you for the suggestion. We have now provided the ROC curve of the regression model in Figure 2. The ROC curve showed a 0.84 predictive capacity for the computed regression model.

Regarding multicollinearity, this was not a problem in our analysis. We used the stepwise regression method to compute the model since it is used to provide an initial screening of variables within a large set of variables; thus, accounting for multicollinearity. We specified the predictors we would like to include, while the SPSS screened which factors contributed to predicting our dependent variable and excluded those who did not. Thus, we usually end up with fewer predictors than we specify. However, those that remain in the model tend to have solid and significant β-coefficients in the expected direction.

5. The manuscript needs significant editing for language and comprehension. For example, what do you mean by, "the unfamiliarity of the population with signs and symptoms of COVID-19 may have delayed healthcare seeking" (page 12) - healthcare seeking?

Thank you for your comment. The scientific writing of the manuscript was revised, and all inconsistencies were corrected.

The term “delayed healthcare seeking” was also corrected for “delayed health care seeking” (with a space) and maintained in the text because it is common in the literature (doi: 10.2147/HIV.S210977; doi: 10.1177/1049732315588083; doi: 10.4102/phcfm.v9i1.1378).

6. Several aspects of the results have not been discussed. Please organise the discussion so as to highlight key points and provide supporting discussion from relevant literature previously reported, if available.

7. In the discussion, suggest also discussing briefly that previous studies have reported prexisting factors such as diabetes are also associated with worse outcomes in COVID-19 patients ((see a metaanalysis by Bradley et al J Diabetes 2022 PMID: 34939735)

8. In the Discussion, you may also provide some indications, based on the findings and experiences from this study, some strategies which may be useful for future. Obviously role of telemedicine may also be discussed including streamlining telemedicine care for both hospitalised and non-hospitalised patients (see PMID: 33796502)

Thank you for comments 6, 7, and 8. Below you can find the changes made to improve the understanding of the discussion.

All key points of the results were included in paragraph 1: epidemiological aspects, comorbidities, signs and symptoms, and mortality.

To optimize the discussion, new information was added in paragraph 4 (page 11).

To answer comment 8, information was added in the last paragraph of the discussion. Telemedicine was not included as a strategy, given difficulties for implementation in Brazil and the low adherence of public health systems. Thus, this would not be a viable strategy from an economic point of view according to the current situation in the country.

9. If possible, please also provide the ROC figure of the final prognostic model.

Thank you for the comment. The ROC figure of the final regression model has been provided (Figure 2).

Reviewer #2: Dear Author(s),

Thank you for your esteemed efforts in increasing our collective knowledge about the predictors (risk factors) of mortality in hospitalized COVID-19 patients.

Please consider the following points:

1. Abstract: the "background" subsection is so broad and does not convey the objective of the study. Please re-write it.

Thanks for the comment. Adjustments were made to the abstract.

2. Abstract: add explanation for "hospital LOS"

Thank you for the comment. Information about the term was added on page 5 (Variables and data collection).

3. "A transmissible disease (COVID-19) caused by the SARS-CoV-2 virus increased the number of severe acute respiratory syndrome (SARS) cases worldwide since December 2019."

This sentence is not linguistically sound. COVID-19 is not an abbreviation for "a transmissible disease". SARS-CoV-2 is not explained. SARS refers to SARS-CoV-1, so please do not use it here.

Thank you for the comment. We made the necessary adjustments to improve the understanding of the text.

4. Introduction: do not use expressions like "to date". Use actual dates to be specific.

Thank you! The text regarding this epidemiological data was updated.

5. "The United States of America and Brazil correspond to 71% of cumulative cases of COVID-19 in the Americas (more than 46 million cases)3." How this sentence is useful for your narrative?! US and Brazil are the most populous countries in the region, so it makes sense that they will have the highest number of cases/fatalities.

Thank you! The text regarding this epidemiological data was updated.

6. Why did you the age of 65 years old as cut-off point for analysis?

Thank you for your comment. It is well documented that the risk of severe COVID-19 increases with age. Since the CDC stated that adults aged ≥ 65 years were at greater risk of COVID-19 complications and death (https://www.cdc.gov/aging/covid19-guidance.html), we have decided to use this cut-off point to stratify individuals into younger vs. older adults. Other studies have also used this age as a cut-off for different analyses, as discussed in the manuscript.

7. How did you decide whether the patient was critically or moderately ill on admission? Which categorization scheme have you used? Please mention that in your Methods section.

Thank you for the comment. The information was added in the “Variables and data collection” of the methods section (page 5).

8. Age (p = 0.001), dyspnea (p = 0.003), and presence of other heart diseases (p =0.005) were different between groups."

It is unclear which groups do you refer to?

Thank you. We explain the subdivision of groups in the second paragraph of the Data Analysis section (Survivors and Non-survivors) and also in the revised paragraph. The aforementioned analyzes were conducted using these two groups, as shown in Table 1.

9. In Table 1; you did not add percentages of signs and symptoms. Please add them.

Thank you for the comment. All signs and symptoms presented in Table 1 (first column) were reported as percentage, as observed by the symbol (%) located next to the referred comorbidity.

10. In Table 1: you did not add percentages of comorbidities. Please add them.

Thank you for the comment. All comorbidities presented in Table 1 (first column) were reported as percentage, as observed by the symbol (%) located next to the referred comorbidity.

11. According to your data, the difference between females and males in mortality (32.3% vs. 30.7%) is neither statisitically or clinically signifcant. I do not understand why you insisted to say that females had higher mortality risk than males. It is not true based on your data. Please fix this accross your manuscript.

Thank you for the comment. Indeed, the data presented in the aforementioned comment indicate that mortality was higher in females than males; however, without statistical significance. In addition, paragraph 5 of the discussion presents the hypothesis that this higher death rate in females was probably due to particularities unrelated to sex. What we discussed in the manuscript concerns survival rate and survival analysis, in which we observed that hospitalized females had a lower survival rate than males.

12. In your limitations section, you did not reflect on your information source (eCOVID-19 platform). Is it mandatory that all hospitalized patients must be registered in this platform? If the answer is "No", then this is an obvious limitation of your dataset that makes it prone to selection bias.

Thank you for your comment. We included information about this limitation in the last paragraph of the discussion section.

13. Your study design can not be called "retrospective cohort study", because hisotical/retrospective cohort studies require at least two distinct groups of individuals/patients to be involved in the study from the begining. You did something like chart review not a cohort study.

You can not consider the dichtomoy of survivor vs. non-survivor as a justification for calling your study as a cohort because the ground idea of cohort designs is dividing the groups of individuals based on their exposure/predictor/independent variable not their outcome/result/dependent variable. For the outcome-based comparisons, we perform case-control studies not cohort studies.

Thank you for the comment. The modification was made in the appropriate place in the methods section (first paragraph, page 4).

14. Your Discussion might benefit from reflecting on hospitalization-related complications:

https://doi.org/10.3390/jcm10040581

Thank you for the comment. We adjusted the discussion section to improve the manuscript and the narrative of the results.

Sincerely,

Attachment

Submitted filename: Response to Reviewers.docx

Decision Letter 1

Claudio Andaloro

15 Aug 2022

PONE-D-22-12861R1Risk factors and survival in patients with COVID-19 in northeastern Brazil.PLOS ONE

Dear Dr. Fernandes,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

==============================

There are 2 major points about the study design raised by a reviewer, please pay attention to these.

==============================

Please submit your revised manuscript by Sep 29 2022 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.

  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.

  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols.

We look forward to receiving your revised manuscript.

Kind regards,

Claudio Andaloro

Academic Editor

PLOS ONE

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: All comments have been addressed

Reviewer #2: (No Response)

**********

2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: The revised manuscript has significantly improved. No further comments. I recommend the manuscript be accepted

Reviewer #2: Dear authors,

Thank you for your esteemed efforts in addressing my previous comments. Unfortunately, there is a couple of critical points that were not properly addressed.

1. Study design:

Case-control studies are retrospective in nature, there is no way to conduct a case-control study prospectively. The reason for this is very simple, distribution of subjects in the study arms "cases" and "controls" is made according to presence of the outcome of interest. The group of individuals who developed the outcome are described as cases, while those who did not experience the outcome are called controls. Therefore, you can not say "retrospective case-control study".

Also, I can't see any elements of case-control design in your workflow. For example, how and from where did you select the controls? which technique did you use for matching?

Your study is more or less a chart review = retrospective analysis for patients records.

2. If you would like to use the STROBE guidelines, please make sure to follow it strictly. I can see multiple discrepancies between your manuscript structure and the STROBE checklist.

Sincerely,

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: No

**********

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.

PLoS One. 2022 Nov 28;17(11):e0278213. doi: 10.1371/journal.pone.0278213.r004

Author response to Decision Letter 1


29 Aug 2022

We would like to thank all considerations made by the reviewers. We clarified and modified the manuscript as suggested. We also appreciate the opportunity to send this new version for peer review.

Reviewer #2: Dear authors,

Thank you for your esteemed efforts in addressing my previous comments. Unfortunately, there is a couple of critical points that were not properly addressed.

1. Study design:

Case-control studies are retrospective in nature, there is no way to conduct a case-control study prospectively. The reason for this is very simple, distribution of subjects in the study arms "cases" and "controls" is made according to presence of the outcome of interest. The group of individuals who developed the outcome are described as cases, while those who did not experience the outcome are called controls. Therefore, you can not say "retrospective case-control study".

Also, I can't see any elements of case-control design in your workflow. For example, how and from where did you select the controls? which technique did you use for matching?

Your study is more or less a chart review = retrospective analysis for patients records.

Response: Thanks for the comment. We updated the study design section with the following: “A retrospective observational cross-sectional study was conducted.”(page 4)

2. If you would like to use the STROBE guidelines, please make sure to follow it strictly. I can see multiple discrepancies between your manuscript structure and the STROBE checklist.

Response: Thanks for the comment. Below is the STROBE check list (the "page" column indicates in which part of the manuscript the information can be found) used, some items were not performed by limitation or were not applicable. Because of this, it is more appropriate to remove from the text the part where the use of the STROBE checklist is mentioned (page 4)

Sincerely

Attachment

Submitted filename: Response to Reviewers 2.docx

Decision Letter 2

Claudio Andaloro

4 Oct 2022

PONE-D-22-12861R2Risk factors and survival in patients with COVID-19 in northeastern Brazil.PLOS ONE

Dear Dr. Fernandes,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

Authors should determine the design of their study properly, as pointed by reviewer 2. Please pay attention to the doubts raised.

Please submit your revised manuscript by Nov 18 2022 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.

  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.

  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols.

We look forward to receiving your revised manuscript.

Kind regards,

Claudio Andaloro

Academic Editor

PLOS ONE

Journal Requirements:

Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice.

[Note: HTML markup is below. Please do not edit.]

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: All comments have been addressed

Reviewer #2: All comments have been addressed

**********

2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: The authors have adequately addressed the comments. I recommend the manuscript be accepted in its current form.

Reviewer #2: 1. Cross-sectional studies can not be described as prospective or retrospective. This is a common mistake.

2. As you said your study is cross-sectional, you do not need to say "observational".

3. The two main types of cross-sectional studies are "descriptive vs. analytical":

https://obgyn.onlinelibrary.wiley.com/doi/full/10.1111/aogs.13331

4. Please update the study design in your abstract accordingly.

5. The study time frame is missed.

6. I still believe that your study is better described as a "retrospective cohort" study.

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: Yes: Sonu Bhaskar

Reviewer #2: No

**********

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PLoS One. 2022 Nov 28;17(11):e0278213. doi: 10.1371/journal.pone.0278213.r006

Author response to Decision Letter 2


20 Oct 2022

Journal Requirements:

Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice.

Response: Thanks for the comments. Below are the changes related to the list of references.

1) A correction was found in relation to reference number 8 (Zhou F, Yu T, Du R, Fan G, Liu Y, Liu Z, et al. Clinical course and risk factors for mortality of adult inpatients with COVID-19 in Wuhan, China: a retrospective cohort study. Lancet. 2020;395(10229):1054-62. doi: 10.1016/s0140-6736(20)30566-3. PMCPMC7270627). In this Article, the units for d-dimer, haemoglobin, and high-sensitivity cardiac troponin I have been corrected to μg/mL (d-dimer), g/L (haemoglobin), and pg/mL (high-sensitivity cardiac troponin I). In figure 1, the start of systematic corticosteroid for non-survivors has been changed to day 13 after illness onset. The appendix has also been corrected. These corrections have been made to the online version as of March 12, 2020, and will be made to the printed version

2) The Original Investigation titled “Baseline Characteristics and Outcomes of 1591 Patients Infected With SARS-CoV-2 Admitted to ICUs of the Lombardy Region, Italy,” (number 13 on the reference list) published April 6, 2020, has been corrected to include the nonauthor collaborator (group) names in a supplement. The doi number remains the same as the first version.

3) In relation to reference 17 titled “Salinas-Escudero G, Carrillo-Vega MF, Granados-Garcia V, Martinez-Valverde S, Toledano-Toledano F, Garduno-Espinosa J. A survival analysis of COVID-19 in the Mexican population. BMC Public Health. 2020;20(1):1616. doi: 10.1186/s12889-020-09721-2.” An amendment to this paper has been published and can be accessed via the original article. Because of this, was included the document (number 18 on reference list) where the correction can be found.

Reviewer #2:

1. Cross-sectional studies can not be described as prospective or retrospective. This is a common mistake.

2. As you said your study is cross-sectional, you do not need to say "observational".

3. The two main types of cross-sectional studies are "descriptive vs. analytical":

https://obgyn.onlinelibrary.wiley.com/doi/full/10.1111/aogs.13331

4. Please update the study design in your abstract accordingly.

5. The study time frame is missed.

6. I still believe that your study is better described as a "retrospective cohort" study

Response: Thanks for the comments. After analyzing the suggested references (comment 3) and observing what is postulated in the book " Foundation of Clinical Research: Applications to practice. Portney, L.G & Watkins, M.P. Third edition. F.A Davis Company, 2015" , this research ranks more appropriately in a retrospective cohort. The necessary modification was made on page 4 and in the abstract (page 2).

The time frame of the study was included on page 4 (lines 2 and 3).

Sincerely,

Attachment

Submitted filename: Response to reviewers.docx

Decision Letter 3

Claudio Andaloro

14 Nov 2022

Risk factors and survival in patients with COVID-19 in northeastern Brazil.

PONE-D-22-12861R3

Dear Dr. Fernandes,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org.

If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Claudio Andaloro

Academic Editor

PLOS ONE

Additional Editor Comments (optional):

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: All comments have been addressed

Reviewer #2: All comments have been addressed

**********

2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: No

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: No further comments. The authors have addressed the comments. I recommend the manuscript be accepted.

Reviewer #2: Dear author(s),

Thank you for addressing all my previous comments. I believe that the manuscript is in a good shape now.

Sincerely,

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: No

Reviewer #2: No

**********

Acceptance letter

Claudio Andaloro

16 Nov 2022

PONE-D-22-12861R3

Risk factors and survival in patients with COVID-19 in northeastern Brazil.

Dear Dr. Fernandes:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

If we can help with anything else, please email us at plosone@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Dr. Claudio Andaloro

Academic Editor

PLOS ONE

Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    Attachment

    Submitted filename: Response to Reviewers.docx

    Attachment

    Submitted filename: Response to Reviewers 2.docx

    Attachment

    Submitted filename: Response to reviewers.docx

    Data Availability Statement

    The information about data availability is at link https://figshare.com/s/439d0d45b7b3e442728f.


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