Abstract
Tubastraea is a genus of azooxanthellate scleractinian corals belonging to the family Dendrophylliidae, which are commonly called sun corals. This genus currently has only seven recognized species. In this paper, we report three new species of Tubastraea, including T. dendroida sp. nov., which has a tree-like colony, T. violacea sp. nov., which has violet polyps, and T. chloromura sp. nov., which has olive green polyps. These species are distinct in their septal structures, as well as their rDNA sequences including the entire ITS1, 5.8S and ITS2, and a segment of the 18S and 28S genes.
Keywords: Scleractinian coral, Azooxanthellate, Ahermatypic coral, Dendrophylliid, South China Sea
BACKGROUND
Ahermatypic corals are scleractinian corals formed by a solitary individual or a small colony of individuals that do not develop into a reef structure (Scott 1984; Schumacher and Zibrowius 1985; Veron 1993). They are typically small, azooxanthellate and live in deeper waters, and therefore are often overlooked in coral community surveys (Lam et al. 2008). This is the case for Tubastraea Lesson, 1830, a genus of azooxanthellate ahermatypic corals in the family Dendrophylliidae. This genus consisting of the species commonly known as sun corals, is mainly distributed in the Indo-Pacific region, but also well-known in the Atlantic, where they were introduced (Creed et al. 2017). Tubastraea currently comprises only seven extant species (Hoeksema and Cairns 2021), including T. coccinea Lesson, 1830, T. diaphana (Dana, 1846), T. faulkneri Wells, 1982, T. floreana Wells, 1982, T. megacorallita Yiu, Chung & Qiu 2021, T. micranthus (Ehernberg, 1834) and T. tagusensis Wells, 1982. Recently, T. aurea (Quoy & Gaimard, 1833) was classified as Australopsammia aurea (Quoy & Gaimard, 1833) (Rowlett 2020). However, in this paper we consider T. aurea (Quoy & Gaimard, 1833) as the valid name, since the decision to classify it otherwise was based only on the fact that the type locality of this species is in the southern hemisphere, rather than on morphological and phylogenetic analysis. The change in classification contradicted the result of a phylogenetic study showing that it is nested within a clade of Turbastraea (Arrigoni et al. 2014).
Species of Tubastraea share several characteristics: 1) their colonies develop from a common basal coenosteum by budding with clear connection among polyps, and their columella are small to moderate size and lack an epitheca; 2) their colonial coralla are firmly attached to substrate; 3) their septal cycles are hexamerally arranged and typically inserted with spongy columella; and 4), their coralla exhibit a rough texture (Cairns 2001; Cairns and Kitahara 2012). Although in most Tubastraea species the septa are not arranged in a Pourtalès plan, those of T. megacorallita are. Because of this fact, Yiu et al. (2021a) removed the lack of this structure from the diagnostic features of this genus. Molecular phylogenetic analysis based on multigene markers (i.e., COI, intergenic spacer between COI and 16S, and a rDNA marker including ITS1, 5.8S, ITS2, and a segment of 18S and 28S) have clarified the classification of Dendrophylliidae (Arrigoni et al. 2014), revealing that, while most other genera of the family represented by at least two species are non-monophyletic, Tubastraea is monophyletic with a strong bootstrap support.
In Hong Kong, five species of Tubastraea have been recorded: T. coccinea, T. diaphana, T. faulkneri, T. megacorallita and T. micranthus (Scott 1984; Clark 1997; Lam et al. 2008; Yiu et al. 2021a). Compared to the zooxanthellate corals that mostly inhabit the shallow waters (< 10 m) (Yeung et al. 2021), azooxanthellate corals including these Tubatraea spp. are mainly distributed in the deeper waters (≥ 10 m), with the exception of T. aurea which was reported from “snorkelling depths” (Scott 1984). While implementing a project studying corallivorous nudibranchs in Hong Kong waters (Hu et al. 2020a b), we found four undescribed species of Tubastraea. One of them, T. megacorallita, has been described recently (Yiu et al. 2021a). In this paper we describe the other three species based on morphological and molecular analyses.
MATERIALS AND METHODS
Sample collection
All samples were collected by SCUBA from Sung Kong and Waglan Island in eastern Hong Kong waters (Fig. 1). They were preserved in 95% ethanol and deposited in the Tropical Marine Biodiversity Collections of the South China Sea (TMBC), Chinese Academy of Sciences, Guangzhou.
Fig. 1.
A map of Hong Kong showing the two sampling sites in this study (red dots), as well as the sampling sites (triangles) of ahermatypic corals in previous studies (Scott 1984; Clark 1997; Lam et al. 2008; Yiu et al. 2021a).
Morphological analysis
Photographs of the specimens were taken using an Olympus OM-D EM1markII camera with a M. Zuiko Digital ED 60mm f2.8 macro lens. Morphological characters defined by Cairns (2001) and Cairns and Kitahara (2012) were used for species description. They included whole colony size, corallite size, fossa depth, intercorallite distance and septa arrangement. The size measurements were performed using a ruler. The following abbreviations were used: GCD, greater calicular diameter; LCD, lesser calicular diameter; S, septa.
DNA extraction, PCR, sequencing and analysis
Genomic DNA was extracted from two specimens in each species using the CTAB method (Stewart and Via 1993). DNA quantity was measured, and purity determined using a NanoDrop ND-1000 spectrophotometer (Thermo Fisher Scientific, USA). DNA quality was checked by 1% agarose gel electrophoresis. Sequences from two mitochondrial regions and one nuclear region were targeted. The first mitochondrial region covers a portion of cytochrome oxidase 1 (COI) gene, while the second mitochondrial region covers the 3' end of COI, intergenic spacer (IGR) between COI and trnM, trnM and the 5'-end of large ribosomal subunit (16S), namely IGR in the rest of the text. The nuclear region covered a portion of rDNA including the entire sequences of ITS1, 5.8S and ITS2, and a portion of 18S and 28S.
Polymerase chain reaction (PCR) was conducted using the extracted DNA as templates to amplify the COI, IGR and rDNA. The partial COI (~750 bp) was amplified using primers designed by Arrigoni et al. (2014): COIDENL (5'-CGCTGGGCGTTTTCTACTAA -3') and COIDENR (5'-GAAATCATTCCAAAGCCAGGT -3'). The amplification program consisted of an initial denaturation step of 94°C for 2 min, followed by 35 cycles of 94°C for 30 sec, 53°C for 1 min, 72°C for 1 min and finally a 7 min extension step at 72°C. The IGR (~500 bp) was amplified using primers designed by Arrigoni et al. (2014): AGAL (5'-CGCATTGAAACACGAGCTTA -3') and DENF (5'-TTTGCTGGTTGGAATTTGGT -3'). Amplification reactions were carried out using the following program: 94°C for 4 min, 35 cycles of 94°C for 1 min, 51°C for 1 min, 72°C for 1 min and a final phase at 72°C for 5 min. The rDNA (~750 bp) was amplified using primers A18S (5'-GATCGAACGGTTTAGTGAGG -3') (Takabayashi et al. 1998) and ITS4 (5'-TCCTCCGCTTATTGATATGC -3') (White et al. 1990), amplifications were performed with the following program; 94°C for 4 min, 40 cycles of 15 sec at 94°C,1 min at 55°C, 30 sec at 72°C and a final phase at 72°C for 5 min. PCR products were sent to BGI Hong Kong for sequencing on an ABI 310 Genetic Analyzer. All new sequences were deposted into GenBank (Table S1).
Alignments of the three genes were conducted separately and trimmed manually to 601 bp for COI, 448 bp for IGR and 684 bp for rDNA using MEGA 7. Sequences were concatenated using SequenceMatrix v.1.7.8 (Vaidya et al. 2011) and then imported to the website version of IQ-Tree (http://iqtree.cibiv.univie. ac.at/; Nguyen et al. 2015) for Maximum Likelihood tree reconstruction with 1,000 ultrafast bootstrap pseudoreplicates (Hoang et al. 2017). ModelTest (Kalyaanamoorthy et al. 2017) incorporated in IQ-Tree was applied for each partition of the concatenated sequences, which detected TPM3u+F+I as the best model for COI, HKY+F+G4 for IGR and K2P+I+G4 for rDNA based on Bayesian Information Criterion. MrBayes v.3.2.7a (Ronquist and Huelsenbeck 2003) was used to perform the Bayesian Inference analysis with four Metropolis-coupled Markov Chain Monte Carlo applied to 10 million generations, sampled at every 1,000 generations with a 25% burn-in. Since the best models detected for the concatenated dataset by ModelTest were not available in MrBayes, they were substituted by the closest overparameterized models (Huelsenbeck and Rannala 2004): GTR+I+G for COI, HKY+I+G for IGR and K2P+I+G for rDNA. The phylogenetic trees were visualized and edited using FigTree v1.4.4. Pairwise genetic distances for the respective COI, IGR and rDNA genes were estimated using MEGA 7 separately based on the p-distance method using the bootstrap method with 10,000 pseudoreplicates for variance estimation. Rates among sites were gamma distributed with invariant sites (G+I) and the gamma parameter was set to four.
RESULTS
SYSTEMATICS
Class ANTHOZOA Ehrenberg, 1834
Order SCLERACTINIA Bourne, 1900
Family DENDROPHYLLIIDAE Gray, 1847
Genus Tubastraea Lesson, 1830
Tubastraea dendroida sp. nov.
(Fig. 2)
urn:lsid:zoobank.org:act:774c42bb-bd84-4f0f-b00f-256ba8d1c90d
Materials examined: Holotype: Colony with 74 corallites, 60 mm in length and 94 mm in height (TMBC030974).
Paratype: Colony with 74 corallites, 13.5 mm in length and 202 mm in height (TMBC030975).
Type locality: Both specimens were collected from Sung Kong (22°11'26.5"N, 114°16'48.4"E) on 28/09/2021 at 17 m depth (Fig. 1).
Etymology: Tubastraea dendroida sp. nov. looks
like a tree branch. The species epithet reflects this morphological character.
Geographic distribution: Currently only known in Hong Kong.
Habitat: Exposed sites with moderate current, rocky substrate, 10–25 m water depth.
Description: Living specimen (Fig. 2A–C) with bright orange tissue covering epithecal wall and corallite. Tentacles yellow, usually withdrawn. Colony dendroid, branching uniplanar, with one elongate, straight axial corallite, and several side branches formed by extra-tentacular budding (Fig 2D). Each specimen with up to 74 corallites varying between 13.5–60 mm in length and 94–202 mm in height. Colony height up to 50 cm. Corallites circular or slightly elliptical (6–8 mm in GCD and 5–7 mm in LCD) with a thin wall. Axial corallites usually biggest among all corallites in a colony. A total of 24 septa present, with 10 to 16 of the septa fused with columella (Table 1). Septa hexamerously arranged (Table 2), containing 3 cycles, with size increasing from inner to outer as S1 = S2 > S3. Septa usually arranged in a Pourtalès plan (Fig. 2E), curving from edge to columella. Columella (Fig. 2E) spongy (2–3 mm in GCD and 1–2 mm in LCD). Fossa 3–11 mm deep. Costae granular. Intercostal striae porous (Fig. 2F).
Fig. 2.
Tubastraea dendroida sp. nov. A–C, photographs of colonies taken in the field. D, skeleton of holotype (left, TMBC030974) and paratype (right, TMBC030975). E, Cross-sectional view of a corallite showing three septal cycles. F, lateral view of a corallite. Scale bars: A–C = 3 cm; D = 1 cm; E–F = 2.5 mm.
Table 1.
Comparison of gross morphological characters among Tubastraea species
Table 2.
Comparison of septal arrangement among Tubastraea species
Taxonomic remarks: Tubastraea dendroida sp. nov. resembles T. micranthus and Dendrophyllia ijimai in that their colonies are uniplanar (Filander et al. 2021). It can be distinguished from T. micranthus in that the latter has a slimmer main “stem”, its three septal cycles are not arranged a Pourtalès plan, and it is usually in dark green or brown colour (Schuhmacher 1984; Cairns and Zibrowius 1997; Sammarco et al. 2010; Filander et al. 2021). However, Tachikawa (2005) reported that T. micranthus had both dark green and orange colour morphs in Japan, with the dark green morph more dominant. Whether this is true, or the orange morph is T. dendroida sp. nov. needs to be determined when specimens are available for examination. The septa of Dendrophyllia ijimai are also arranged in a Pourtalès plan, but this species differs from the new species in having four septal cycles instead of three septal cycles. It is the second species of Tubastraea known to have a Pourtalès plan.
Tubastraea chloromura sp. nov.
(Fig. 3)
urn:lsid:zoobank.org:act:1d107473-b405-468f-9212-8a2fe77db739
Materials examined: Holotype: Colony with 26 corallites, 45 mm in length and 32 mm in height (TMBC030976).
Paratype: Colony with 16 corallites, 57 mm in length and 30 mm in height (TMBC030977).
Type locality: Both specimens were collected from Waglan Island (22°10'51.4"N, 114°18'11.8"E) on 14/03/2021 at 10 m depth (Fig. 1).
Etymology: Tubastraea chloromura sp. nov. has a distinct olive green epithecal wall. The species epithet chloromura (Latin chloro = green, murus = wall) reflects this morphological character.
Geographic distribution: Currently only known in Hong Kong.
Habitat: Exposed sites with moderate current, rocky substrate.
Description: Living specimen (Fig. 3A–B) with olive green tissue covering epithecal wall of corallite, and light green tentacles. Colony phaceloid. Corallites formed by extratentacular budding (Fig 3B), consisting of 16–26 corallites. Colonies between 45–57 mm in length and 30–32 mm in height. Corallites circular (6–10 mm in GCD and 6–11 mm in LCD) with a thin wall. A total of 34–40 septa present, with 10 to 12 of the septa fused with columella (Table 1). Septa hexamerously arranged (Table 2), containing 4 cycles, with increasing size from inner to outer as S1 > S2 > S3 = S4. Septa normally inserted. Septa spongy, highly porous (Fig. 3D). Columella (Fig. 3D) spongy (1.5–4 mm in GCD and 4–6 mm in LCD). Fossa 4–8 mm deep. Costae granular. Intercostal striae porous (Fig. 3E).
Taxonomic remarks: Tubastraea chloromura sp. nov. resembles T. coccinea in gross colony morphology, but its tissues are olive green. It was thought by the first author as a colour variant of T. coccinea when he collected the samples. This new species exhibits sympatric distribution with T. coccinea (Fig 3A). In addition to having a unique tissue colour, T. chloromura sp. nov. has a thinner and more porous septal texture than other Tubastraea species.
Fig. 3.
Tubastraea chloromura sp. nov. A, a colony of the new species (olive green) next to a colony of T. coccinea (red) in the field, a nudibranch Phestilla melanobranchia (pointed by a white arrowhead). B, a colony of the new species (olive green) next to a colony of T. coccinea (red) in laboratory aquarium. C, open polyp. D, skeleton of holotype. E, cross-sectional view of a corallite showing four septal cycles. F, lateral view of a corallite. Scale bars: A–B = 1 cm; C = 5 mm; D = 1 cm; E–F = 5 mm.
Tubastraea violacea sp. nov.
(Fig. 4)
urn:lsid:zoobank.org:act:972E5F06-D434-45CB-8961-8CD65BC6DE38
Materials examined: Holotype: Colony with 130 corallites, 160 mm in length and 83 mm in height (TMBC030978).
Paratype: Colony with 16 corallites, 35 mm in length and 40 mm in height (TMBC030979).
Type locality: The holotype was collected from Sung Kung (22°11'26.5"N, 114°16'48.4"E) (Fig. 1) on 14/03/2021 at 10 m depth. The paratype was collected from Waglan Island (22°10'51.4"N, 114°18'11.8"E) on 28/09/2021 at 10 m depth.
Etymology: Tubastraea violacea sp. nov. has violet tissue covering the corallites. The species epithet reflects this morphological character.
Geographic distribution: Hong Kong (this study) and Canal Woodin, New Caledonia (based on the sequences of Tubastraea sp 2. in Arrigoni et al. 2014)
Habitat: Exposed sites with moderate current, rocky substrate.
Description: Living specimen (Fig. 4A) with pale purple tissue covering epithecal wall, violet tissue covering corallite and translucent yellow tentacles. Colony phaceloid with each long corallite having its own wall. Corallites formed by extratentacular budding (Fig. 4B), consisting of 16–130 corallites. Colonies 35–160 mm in length and 40–83 mm in height. Corallites cylindrical (10–18 mm in GCD and 8–14 mm in LCD) with a thick wall. A total number of 75–87 septa present, with 23–26 of the septa fused with columella (Table 1). Septa hexamerously arranged (Table 2), containing 5 cycles, with the size order of S1 = S2 > S3 > S5 > S4. Septa arranged in a Pourtalès plan. Columella (Fig. 4C) spongy (6.0–8.0 mm in GCD and 2.5–4.0 mm in LCD). Fossa 9–11 mm deep. Costae granular. Intercostal striae porous (Fig. 4D).
Fig. 4.
Tubastraea violacea sp. nov. A, a colony of in the field and opened polyp at right top corner. B, open polyps. C, skeleton of part of the holotype (TMBC030978). C, cross-sectional view of corallite showing the five septal cycles. D, lateral view of a corallite. Scale bars: A–C = 1 cm; D–E = 5 mm.
Taxonomic remarks: Tubastraea violacea sp. nov. is unique among the congeneric species in having violet tissue covering the corallites. It is also remarkable in having a Pourtalès plan of septal arrangement, and that is the third species of Tubastraea has this character. Yiu et al. (2021a) observed that the Pourtalès plan is absent in small corallites of T. megacorallita but it is usually present in corallites at least 17 mm × 15 mm (GCD × LCD) in size. However, all corallites of the type specimens of T. violacea sp. nov. were observed to exhibit a Pourtalès plan. Besides, the same as T. megacorallita, T. violacea sp. nov. has five septal cycles. All other Tubatraea species have three to four septal cycles. Moreover, T. violacea sp. nov. can be distinguished from T. megacorallita in having cylindrical corallites rather than elliptical corallites. Also, the two species are different in their septal size orders.
Molecular analyses
The alignment and concatenation resulted in a dataset of 1.733 bp (COI: 601 bp, IGR: 448 bp, rDNA: 684 bp). Pair-wise sequence comparisons were conducted to determine the inter-and intra-specific p-distances (Table 3). Intraspecific p-distances in the three species are in general very small, with 0% for COI, 0% for IGR, and 0.15% for rDNA in T. violacea sp. nov., 0% for COI, 0.22% for IGR, and 0% for rDNA in T. chloromura sp. nov., and 0% for COI, 0.22% for IGR, and 1.79% for rDNA in T. dendroida sp. nov. The relatively large rDNA p-distances between the two specimens of T. dendroida sp. nov. and between the two species of T. micrnthus indicate the potential of cryptic speciation in this species. Tubastraea violacea sp. nov. is most closely related to Tubastraea sp. 2. HS2883, an undescribed species collected from Caledonia (Arrigoni et al. 2014); the sequences between them had a p-distance of 0% for COI, 0% for IGR, and 0.32–0.48% for rDNA, indicating they are conspecific, despite their differences in tissue colour. The species closest to T. chloromura sp. nov. and Tubastraea dendroida sp. nov. is T. micranthus. Between T. chloromura sp. nov. and T. micranthus, the p-distance was 0.17% for COI, 0–0.22% for IGR, and 0.96% for rDNA. Between T. dendroida sp. nov. and T. micranthus, the p-distance was 0% for COI, 0–0.22% for IGR and 1.29–1.45% for rDNA. In comparison, the p-distance between T. micranthus and T. coccinea was 0% for COI, 0% for IGR and 1.29% for rDNA. Overall, these genetic distances support our designation of the three new species.
Table 3.
Tubastraea intra-and inter-specific uncorrected p-distances (%) for COI/IGR/rDNA. Data obtained in this study are in bold
The ML and BI trees constructed using the concatenated sequences showed the same topology (Fig. 5), with species of the genus Tubastraea forming a monophyletic clade within the family Dendrophylliidae. This result is in agreement with Arrigoni et al. (2014), and supports retention of the name T. aurea, rather than reclassifying the species as Australopsammia aurea (Rowlett 2020). Among the species of Tubastraea used in this analysis, T. dendroida sp. nov. is sister to T. chloromura sp. nov. The (T. dendroida sp. nov. + T. chloromura sp. nov.) clade is sister to T. micranthus. Tubastraea violacea sp. nov. along with Tubastraea sp. 2 HS2883 are sister to Tubastraea sp. 2 HS2884. The ((T. violacea sp. nov. + Tubastraea sp. 2 HS2883) + Tubastraea sp. 2 HS2884) clade is sister to T. coccinea.
Fig. 5.
Phylogenetic tree of the concatenated COI/IGR/rDNA dataset constructed using the Maximum Likelihood method and Bayesian Inference method. Bootstrap values > 70 and Bayesian Inference posterior probability values > 0.7 are shown in the nodes. Data obtained in this study are indicated by an asterisk. # indicates the species name in Rowlett (2020) was Australopsammia aurea.
DISCUSSION
Our discovery of these three new species demonstrate Hong Kong’s high diversity of sun corals. To date, eight of the ten recognized Tubastraea species have been recorded in Hong Kong waters (Scott 1984; Clark 1997; Lam et al. 2008; Yiu et al. 2021a; this study). The addition of these new species has changed our view on the use of several morphological characters in the taxonomy of Tubastraea. Among the previous described species, T. micranthus is the only species whose corallines form a tree-like structure, and the colonies are uniplanar. The discovery of Tubastraea dendroida sp. nov. having these properties yet the main stem of the colony attenuates from the base to the tip indicates the genus is more diverse in colony shape than previously thought. Moreover, a previous study suggested that T. megacorallita is unique among the congeneric species in having a Pourtalès plan of septal arrangement (Yiu et al. 2021a). Our finding of the Pourtalès plan in the corallite septa of Tubastraea violacea sp. nov., and Tubastraea dendroida sp. nov. supports our removal of this character as a diagnostic character of the genus (Yiu et al. 2021a).
We successfully used the three markers developed by Arrigoni et al. (2014) to classify our specimens. However, among them, only rDNA had adequate phylogenetic signal for species delimitation (Figs. S1–S3), although using the concatenated sequences resulted in improved support for some nodes of the trees. The result indicates the need for the adoption of more markers/molecular tools, such as transcriptome-or genome-wide target-enrichment baits (Quattrini et al. 2018; Quek et al. 2020), for more robust phylogenetic analysis of Tubastraea. Nevertheless, our integrated molecular and morphological analyses showed that the three species described in this study can be distinguished from their congeneric species reliably.
Among the three newly described species, Tubastraea chloromura sp. nov., is currently only known in Hong Kong. We found no other very similar gene sequences in public databases. Colonies very similar in morphology with T. dendroida sp. nov. have been reported in Japan as an orange form of T. micranthus (Tachikawa 2005), which indicates potential distribution of T. dendroida sp. nov. in Japan. Furthermore, the type specimens of T. violacea sp. nov. in Hong Kong are violet. However, Arrigoni et al. (2014) reported a yellow Tubastraea sp. 2 with sequences closely matching T. violacea sp. nov. in Canal Woodin, New Caledonia. Therefore, this species may show colour variation and have a wide distribution in tropical to subtropical western Pacific.
The distribution of the three new species is consistent with that of other azooxanthellate dendrophylliids in that they mainly live in exposed and deeper areas (Scott 1984). The nudibranch Phestilla melanobrachia, gastropods Coralliophila costularis, Epidendrium sp. (either E. aureum or E. sordidum) have been reported as common predators of Tubastraea spp. in Hong Kong (Yiu et al. 2021a b). During the field surveys, we also observed a juvenile P. melanobrachia feeding on a colony of T. chloromura sp. nov. (Fig 3A). Therefore, we suspect that it also preys on T. dendroida sp. nov. and T. violacea sp. nov.
Key to species of Tubastraea
1a. Colony branching uniplanar ............... 2
1b. Colony not branching uniplanar ............... 3
2a. Dark green, brown black coenosarc ............... T. micranthus
2b. Orange coenosarc with yellow tentacles ............... T. dendroida sp. nov.
3a. Colony plocoid ............... 4
3b. Colony non-plocoid ............... 5
4a. Corallite with moderately deep and up to 48 septa ............... T. coccinea
4b. Corallite with deep and spongy/shallow fossa and more than 48 septa ............... T. faulkneri
5a. Corallite elliptical ............... T. megacorallita
5b. Corallite non-elliptical ............... 6
6a. Corallite cylindrical ............... 7
6b. Corallite circular ............... 8
7a. Septal arranged in a Pourtalès plan ............... T. violacea sp. nov.
7b. Septal arranged normally ............... 9
8a. Septal size: S1 > S2 > > S3 > S4 or S1 = S2 > S4 = S3 ............... T. diaphana
8b. Septal size: S1 > S2 > S3 = S4 ............... T. chloromura sp. nov.
9a. Corallite with moderately deep fossa and 3 septal cycles ............... T. floreana
9b. Corallite with deep fossa and 3 or 4 septal cycles ............... T. tagusensis
CONCLUSIONS
We described Tubastraea dendroida sp. nov., Tubastraea chloromura sp. nov. and Tubastraea violacea sp. nov. from Hong Kong waters based on morphological and molecular analyses. Like other azooxanthellate corals, these new species occur at exposed areas and deeper waters. Tubastraea dendroida sp. nov. has a tree-like colony that is different in colour and shape from T. micranthus, the other species of this genus with a tree-like colony. Tubastraea chloromura sp. nov. and Tubastraea violacea sp. nov. have distinct colour in the tissues covering their corallites. The three species can be easily recognized by the shape and colour of the colonies. They are also distinct in their corallite structures as well as molecular marker sequences.
Supplementary materials
Phylogenetic tree of the COI dataset constructed using Maximum Likelihood method. Bootstrap values > 70 are shown in the nodes. Data obtained from this study are indicated by an asterisk. # indicates the species name in Rowlett (2020) was Australopsammia aurea.
Phylogenetic tree of the IGR dataset constructed using Maximum Likelihood method. Bootstrap values > 70 are shown in the nodes. Data obtained from this study are indicated by an asterisk. # indicates the species name in Rowlett (2020) was Australopsammia aurea.
Phylogenetic tree of the concatenated rDNA dataset constructed using Maximum Likelihood method. Bootstrap values > 70 are shown in the nodes. Data obtained from this study are indicated by an asterisk. # indicates the species name in Rowlett (2020) was Australopsammia aurea.
GenBank accession numbers of the sequences used in phylogeny reconstruction and species delimitation retrieved from NCBI. Sequences of specimens from this study are in bold and sequences used in pair-wise distance calculations are indicated by an asterisk (*).
Acknowledgments
This work and three new species names were registered with ZooBank under urn:lsid:zoobank.org:pub:55f1e773-b462-4bca-b44e-e99e71a59124. This study was supported by the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) (GML2019ZD0404, SMSEGL20SC02) and Environmental and Conservation Fund of Hong Kong (34/2019) and. We thank Yu Sheung Law for logistic support, Jack Chi Ho Ip and Ting Xu for help with molecular analysis, and Josy Wing Yan Lai and Max Hin Leung for assistance in field surveys.
Footnotes
Authors’ contributions: JWQ initiated the study and revised the manuscript. SKFY conducted sampling, molecular and morphological analysis as well as drafted the manuscript.
Competing interests: SKFY and JWQ declares they have no conflict of interest.
Availability of data and materials: The accession numbers of specimens had been deposited on the GenBank.
Consent for publication: All of the authors agreed to publish the paper.
Ethics approval consent to participate: Not applicable.
References
- Arrigoni R, Kitano YF, Stolarski J, Hoeksema BW, Fukami H, Stefani F, Galli P, Montano S, Castoldi E, Benzoni F. 2014. A phylogeny reconstruction of Dendrophylliidae (Cnidaria, Scleractinia) based on molecular and micromorphological criteria, and its ecological implications. Zool Scr 43:661–688. doi:10.1111/zsc.12072.
- Bourne GC. 1900. Chap. 6. The Anthozoa. In: Lankester E.R. (ed), A Treatise on Zoology. Part II. The Porifera and Coelenterata. Adam & Charles Black, London, UK.
- Cairns SD. 1991. A revision of the ahermatypic Scleractinia of the Galapagos and Cocos Islands. Smithsonian Contributions to Zoology 504:1–44. doi:10.5479/si.00810282.504.
- Cairns SD. 1994. Scleractinia of the Temperate North Pacific. Smithsonian Contributions to Zoology 557:1–150. doi:10.5479/si.00810282.557.i.
- Cairns SD. 2001. A generic revision and phylogenetic analysis of the Dendrophylliidae (Cnidaria: Scleractinia). Smithsonian Contributions to Zoology 615:1–75. doi:10.5479/si.00810282.615.
- Cairns SD, Kitahara MV. 2012. An illustrated key to the genera and subgenera of the recent azooxanthellate Scleractinia (Cnidaria, Anthozoa), with an attached glossary. ZooKeys 227:1–47. doi:10.3897/zookeys.227.3612. . [DOI] [PMC free article] [PubMed]
- Cairns SD, Zibrowius H. 1997. Cnidaria Anthozoa: azooxanthellate Scleractinia from the Philippine and Indonesian regions. Memoires du Museum National d’Histoire Naturelle 172:27–243.
- Clark TH. 1997. The distribution of ahermatypic corals at Cape d’ Aguilar, Hong Kong. The Marine Flora and Fauna of Hong Kong and Southern China IV (ed. B. Morton). Proceedings of the Eighth International Marine Biological Workshop: The Marine Flora and Fauna of Hong Kong and Southern China, Hong Kong, Hong Kong, University Press, Hong Kong.
- Creed JC, Fenner D, Sammarco P, Cairns S, Capel K, Junqueira AOR, Cruz I, Miranda RJ, Carlos-Junior L, Mantelatto MC, Oigman-Pszczol S. 2017. The invasion of the azooxanthellate coral Tubastraea (Scleractinia: Dendrophylliidae) throughout the world: history, pathways and vectors. Biol Invasions 19:283–305. doi:10.1007/s10530-016-1279-y.
- Dana JD. 1846–1849. Zoophytes. United States Exploring Expedition during the years 1838–1842. Lea and Blanchard, Philadelphia 7:1–740, 61 pls. (1846: 1–120, 709–720; 1848: 121–708, 721-740; 1849: atlas pls. 1-61).
- Ehrenberg CG. 1834. Beiträge zur physiologischen Kenntniss der Corallenthiere im allgemeinen, und besonders des rothen Meeres, nebst einem Versuche zur physiologischen Systematik derselben. Abhandlungen der Königlichen Akademie der Wissenschaften, Berlin, Germany.
- Filander ZN, Kitahara MV, Cairns SD, Sink KJ, Lombard AT. 2021. Azooxanthellate Scleractinia (Cnidaria, Anthozoa) from South Africa. ZooKeys 1066:1–198. doi:10.3897/zookeys.1066.69697. . [DOI] [PMC free article] [PubMed]
- Gray JE. 1847. An outline of an arrangement of stony corals. Annals and Magazine of Natural History 19:120–128.
- Hoang DT, Chernomor O, Von Haeseler A, Minh BQ, Vinh LS. 2017. UFBoot2: Improving the ultrafast bootstrap approximation. Mol Biol Evol 35:518–522. doi:10.1093/molbev/msx281. . [DOI] [PMC free article] [PubMed]
- Hoeksema BW, Cairns S. 2021. World List of Scleractinia, Dendrophylliidae Gray, 1847. Available from: http://www. marinespecies.org/aphia.php?p=taxdetails&id=135074. Accessed 1 Dec. 2021.
- Hu J, Zhang Y, Xie JY, Qiu JW. 2020a. A new species of predatory nudibranch (Gastropoda: Trinchesiidae) of the coral Pavona decussata. Zool Stud 59:30. doi:10.6620/ZS.2020.59-30. . [DOI] [PMC free article] [PubMed]
- Hu J, Zhang Y, Yiu SKF, Xie JY, Qiu JW. 2020b. A new species of predatory nudibranch (Gastropoda: Trinchesiidae) of the coral Goniopora. Zool Stud 59:62. doi:10.6620/ZS.2020.59-62. . [DOI] [PMC free article] [PubMed]
- Huelsenbeck JP, Rannala B. 2004. Frequentist properties of Bayesian posterior probabilitiesof phylogenetic trees under simple and complex substitution models. Syst Biol 53:904–913. doi:10.1080/10635150490522629. . [DOI] [PubMed]
- Kalyaanamoorthy S, Minh BQ, Wong TKF, von Haeseler A, Jermiin LS. 2017. ModelFinder: Fast model selection for accurate phylogenetic estimates. Nat Methods 14:587–589. doi:10.1038/nmeth.4285. . [DOI] [PMC free article] [PubMed]
- Lam K, Morton B, Hodgson P. 2008. Ahermatypic corals (Scleractinia: Dendrophylliidae, Oculinidae and Rhizangiidae) recorded from submarine caves in Hong Kong. J Nat Hist 42:729–747. doi:10.1080/00222930701862724.
- Lesson RP. 1830. Voyage autour du monde: exécuté par ordre du roi, sur la corvette de Sa Majesté, la Coquille, pendant les années 1822, 1823, 1824, et 1825, par M. L.I. Duperrey. Zoologie 2, Paris, France.
- Ronquist F, Huelsenbeck JP. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572–1574. doi:10.1093/bioinformatics/btg180. . [DOI] [PubMed]
- Nemenzo F. 1960. Systematic studies on Philippine shallow water scleractinians, IV: Suborder Dendrophylliida. Natural and Applied Science Bulletin 18:1–21.
- Ogawa K, Takahashi K. 1993. A revision of Japanese ahermatypic corals around the coastal region with a guide to identification. I. Genus Tubastraea. Nankiseibutu (The Nanki Biological Society) 35:95–109. (in Japanese)
- Quattrini AM, Faircloth BC, Dueñas LF, Bridge TCL, Brugler MR, Calixto-Botía IF, DeLeo DM, Forêt S, Herrera S, Lee SMY, Miller DJ, Prada C, Rádis-Baptista G, Ramírez-Portilla C, Sánchez JA, Rodríguez E, McFadden CS. 2018. Universal target-enrichment baits for anthozoan (Cnidaria) phylogenomics: New approaches to long-standing problems. Mol Ecol Resour 18(2):281–295. doi:10.1111/1755-0998.12736. . [DOI] [PubMed]
- Quek RZB, Jain SS, Neo ML, Rouse GW, Huang D. 2020. Transcriptome-based target-enrichment baits for stony corals (Cnidaria: Anthozoa: Scleractinia). Mol Ecol Resour 20:807–818. doi:10.1111/1755-0998.13150. . [DOI] [PMC free article] [PubMed]
- Rowlett J. 2020. Indo-Pacific Corals. Self-published, Rowlett.
- Sammarco PW, Portwe SA, Cairns SD. 2010. A new coral species introduced into the Atlantic Ocean -Tubastraea micranthus (Ehrenberg 1834) (Cnidaria, Anthozoa, Scleractinia): An invasive threat? Aquat Invasions 5(2):131–140. doi:10.3391/ai.2010.5.2.02.
- Schuhmacher H. 1984. Reef-building properties of Tubastraea micranthus (Scleractinia, Dendrophylliidae), a coral without zooxanthellae. Mar Ecol Prog Ser 20:93–99.
- Schumacher H, Zibrowius H. 1985. What is hermatypic? Corals Reefs 4:1–9. doi:10.1007/BF00302198.
- Scott PJB. 1984. The corals of Hong Kong. Hong Kong University Press, Hong Kong.
- Tachikawa H. 2005. Azooxanthellate Scleractinia (Hexacorallia, Anthozoa, Cnidaria) Collected From Otsuki, Kochi Prefecture, Japan. Kuroshio Biosphere 2:1–27.
- Takabayashi M, Carter DA, Loh WKT, Hoegh-Guldberg O. 1998. A coral-specific primer for PCR amplification of the internal transcribed spacer region in ribosomal DNA. Mol Ecol 7:925–931. doi:10.1111/j.1365-294X.1998.00368.x.
- Vaidya G, Lohman DJ, Meier R. 2011. Cladistics multi-gene datasets with character set and codon information. Cladistics 27:171–180. doi:10.1111/j.1096-0031.2010.00329.x. . [DOI] [PubMed]
- Veron JEN. 1993. A biogeographic database of hermatypic corals; species of the central Indo-Pacific, genera of the world. Australian Institute of Marine Science. Townsville, Queensland.
- Wells JW. 1982. Notes on Indo-Pacific scleractinian corals, Part 9: New corals from the Galapagos Islands. Pac Sci 36(2):211–219.
- Wells JW. 1983. Annotated list of the scleractinian corals of the Galápagos. University of California Press, Berkley, California, USA.
- White TJ, Bruns T, Lee S, Taylor J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: M. A. Innis, D. H. Gelfand, J. J. Sninsky & T. J. White (Eds). PCR Protocols. A Guide to Methods and Application. Academic Press Inc, San Diego, California, USA.
- Yeung YH, Xie JY, Kwok CK, Kei K, Ang Jr P, Chan LL, Dellisanti W, Cheang CC, Chow KW, Qiu JW. 2021. Hong Kong’s subtropical scleractinian coral communities: Baseline, environmental drivers and management implications. Mar Pollut Bull 167:112289. doi:10.1016/j.marpolbul.2021.112289. . [DOI] [PubMed]
- Yiu SKF, Chung SSW, Qiu JW. 2021a. A new species of the sun coral genus Tubastraea (Scleractinia: Dendrophylliidae) from Hong Kong. Zootaxa 5047(1):1–16. doi:10.11646/zootaxa.5047.1.1. . [DOI] [PubMed]
- Yiu SKF, Chung SSW, Qiu JW. 2021b. New observations on the corallivorous nudibranch Phestilla melanobrachia: morphology, dietary spectrum, and early development. J Molluscan Stud 87(4):eyab034. doi:10.1093/mollus/eyab034.
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Phylogenetic tree of the COI dataset constructed using Maximum Likelihood method. Bootstrap values > 70 are shown in the nodes. Data obtained from this study are indicated by an asterisk. # indicates the species name in Rowlett (2020) was Australopsammia aurea.
Phylogenetic tree of the IGR dataset constructed using Maximum Likelihood method. Bootstrap values > 70 are shown in the nodes. Data obtained from this study are indicated by an asterisk. # indicates the species name in Rowlett (2020) was Australopsammia aurea.
Phylogenetic tree of the concatenated rDNA dataset constructed using Maximum Likelihood method. Bootstrap values > 70 are shown in the nodes. Data obtained from this study are indicated by an asterisk. # indicates the species name in Rowlett (2020) was Australopsammia aurea.
GenBank accession numbers of the sequences used in phylogeny reconstruction and species delimitation retrieved from NCBI. Sequences of specimens from this study are in bold and sequences used in pair-wise distance calculations are indicated by an asterisk (*).