TABLE 4.
Overview of the genes (sorted alphabetically by gene name) to which the differentially methylated CpGs are annotated
| Gene | Full gene name | Freq | Gene | Full gene name | Freq |
|---|---|---|---|---|---|
| ANXA11 | Annexin A11 | LEPREL1 | Prolyl 3‐hydroxylase 2 | ||
| APOB48R | Apolipoprotein B48 receptor | LTBP1 | Latent transforming growth factor beta binding protein 1 | ||
| ARHGEF28 | Rho guanine nucleotide exchange factor 28 | LY86 | Lymphocyte antigen 86 | ||
| B4GALT5 | Beta‐1.4‐galactosyltransferase 5 | MED13L | Mediator complex subunit 13 like | ||
| BCKDHB | Branched chain keto acid dehydrogenase E1 subunit beta | NAT8 | N‐acetyltransferase 8 | ||
| BLNK | B cell linker | NET1 | Neuroepithelial cell transforming 1 | ||
| CD93 | CD93 molecule | NMUR1 | Neuromedin U receptor 1 | ||
| CERS6 | Ceramide synthase 6 | NUCKS1 | Nuclear casein kinase and cyclin dependent kinase substrate 1 | ||
| CES1 | Carboxylesterase 1 | PDE4D | Phosphodiesterase 4D | 2 | |
| CIITA | Class II major histocompatibility complex transactivator | PDK4 | Pyruvate dehydrogenase kinase 4 | ||
| CLASP1 | Cytoplasmic linker associated protein 1 | PDZD8 | PDZ domain containing 8 | ||
| CPSF4L | Cleavage and polyadenylation specific factor 4 like | 2 | PLAGL1 | PLAG1 like zinc finger 1 | |
| CPT1A | Carnitine palmitoyltransferase 1A | PLCXD2 | Phosphatidylinositol specific phospholipase C X domain containing 2 | ||
| CSGALNACT1 | Chondroitin sulfate N‐acetylgalactosaminyltransferase 1 | PPAP2B | Phospholipid phosphatase 3 | ||
| DLGAP1 | DLG associated protein 1 | PRKCA | Protein kinase C alpha | ||
| DTD1 | D‐tyrosyl‐tRNA deacylase 1 | PSTPIP2 | Proline‐serine‐threonine phosphatase interacting protein 2 | ||
| DZIP1L | DAZ interacting zinc finger protein 1 like | PTH2R | Parathyroid hormone 2 receptor | ||
| EFNA5 | Ephrin A5 | RERE | Arginine‐glutamic acid dipeptide repeats | ||
| EHD1 | EH domain containing 1 | RNF166 | Ring finger protein 166 | ||
| EIF4E3 | Eukaryotic translation initiation factor 4E family member 3 | RNF19A | Ring finger protein 19A | ||
| ELMO1 | Engulfment and cell motility 1 | SLC22A23 | Solute carrier family 22 member 23 | ||
| FAM198B | Family with sequence similarity 198 member B | SNTB1 | Syntrophin beta 1 | ||
| FOXN3 | Forkhead box N3 | STARD9 | StAR related lipid transfer domain containing 9 | ||
| FTO | Fat mass and obesity‐associated protein | SUSD1 | Sushi domain containing 1 | ||
| GALNT2 | Polypeptide N‐acetylgalactosaminyltransferase 2 | 2 | SWT1 | SWT1, RNA endoribonuclease homolog | |
| GNAO1 | G protein subunit alpha o1 | TCF25 | Transcription factor 25 | ||
| HAL | Histidine ammonia‐lyase | TCFL5 | Transcription factor like 5 | ||
| HEPN1 | Hepatocellular carcinoma down‐regulated 1 | TEC | Tec protein tyrosine kinase | ||
| IMPA2 | Inositol monophosphatase 2 | TM4SF20 | Transmembrane 4 L six family member 20 | ||
| INPP1 | Inositol polyphosphate‐1‐phosphatase | TMEM45A | Transmembrane protein 45A | ||
| INPP4A | Inositol polyphosphate‐4‐phosphatase type I A | 2 | TPD52L1 | Tumor protein D52 like 1 | |
| INPP5A | Inositol polyphosphate‐5‐phosphatase A | 2 | TSPAN2 | Tetraspanin 2 | |
| KCNQ1 | Potassium voltage‐gated channel subfamily Q member 1 | 2 | TSSC1 | EARP complex and GARP complex interacting protein 1 | |
| KIAA1267 | KAT8 regulatory NSL complex subunit 1 | TULP4 | Tubby like protein 4 | ||
| LDB2 | LIM domain binding 2 | ZEB2 | Zinc finger E‐box binding homeobox 2 |
Note: Genes of uncertain function are not listed; these can be found in Tables S2–S4.
Abbreviations: Freq, frequency (the number of unique differentially methylated CpGs annotated to the gene concerned).