Skip to main content
. 2022 Dec 15;11:e85171. doi: 10.7554/eLife.85171

Table 1. Imaging parameters for the different experiments described.

Experiment Objective Fluorochrome(Excitation/emission wavelengths) Image spacing in z Exposure time per image Number of Image stacks Total time Volume(x, y, z)
Microspheres (Matrigel) 60× DragonGreen
(490/507–530 nm)
41 slices, 1 µm apart 16ms 60 64 s 225.3 µm × 84.5 µm×40 µm
tdTomato parasites (550/579–608 nm)
Fibrin vs Matrigel and TgMIC2 KO directionality 20× Hoechst 33342
(385/420–449 nm)
41 x
1 µm
16ms 120 80 s 665.6 µm × 249.6 µm×40 µm
Force Mapping, WT (Fibrin) 60× tdTomato parasites
(550/579–608 nm)
50x0.5 µm 16ms 60 96 s 225.3 µm × 84.5 µm×24.5 µm
Fibrin (635/666–723 nm)
WT, TgMyoA KO, TgMIC2 KO; Brightfield
(Matrigel, fibrin)
60× N/A: Brightfield 21 x
1 µm
40ms 360 302 s 225.3 µm × 225.3 µm×20 µm
Nuclear size vs constriction
(Matrigel)
20× Hoechst 33342
(385/420–449 nm)
41 x
1 µm
16ms 60 80 s 665.6 µm × 249.6 µm×40 µm
Anti-SAG1 Alexa 548 (550/579–608 nm)
TgMyoA KO Force Map
(Fibrin)
60× Hoechst 33342
(385/420–449 nm)
50x0.5 µm 16ms 60 96 s 225.3 µm × 84.5 µm×24.5 µm
Fibrin (635/666–723 nm)
TgMIC2 KO Force Map
(Fibrin)
60× YFP cytosol (490/507–530 nm) 50x0.5 µm 16ms 60 96 s 225.3 µm × 84.5 µm×24.5 µm
Fibrin (635/666–723 nm)