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. 2023 Jan 17;18(1):e0280278. doi: 10.1371/journal.pone.0280278

A study protocol for the validation of a prognostic model with an emphasis on modifiable factors to predict chronic pain after a new episode of acute- or subacute nonspecific idiopathic, non-traumatic neck pain presenting in primary care

Martine J Verwoerd 1,*, Harriet Wittink 1, Francois Maissan 1, Sander M J van Kuijk 2, Rob J E M Smeets 3
Editor: Aqeel M Alenazi4
PMCID: PMC9844852  PMID: 36649242

Abstract

Background

The primary objective of this study is to identify which modifiable and non-modifiable factors are independent predictors of the development of chronic pain in patients with acute- or subacute nonspecific idiopathic, non-traumatic neck pain, and secondly, to combine these to develop and internally validate a prognostic prediction model.

Methods

A prospective cohort study will be conducted by physiotherapists in 30 primary physiotherapy practices between January 26, 2020, and August 31, 2022, with a 6-month follow-up until March 17, 2023. Patients who consult a physiotherapist with a new episode of acute- (0 to 3 weeks) or subacute neck pain (4 to 12 weeks) will complete a baseline questionnaire. After their first appointment, candidate prognostic variables will be collected from participants regarding their neck pain symptoms, prior conditions, work-related factors, general factors, psychological and behavioral factors. Follow-up assessments will be conducted at six weeks, three months, and six months after the initial assessment. The primary outcome measure is the Numeric Pain Rating Scale (NPRS) to examine the presence of chronic pain. If the pain is present at six weeks, three months, and six months with a score of NPRS ≥3, it is classified as chronic pain. An initial exploratory analysis will use univariate logistic regression to assess the relationship between candidate prognostic factors at baseline and outcome. Multiple logistic regression analyses will be conducted. The discriminative ability of the prognostic model will be determined based on the Area Under the receiver operating characteristic Curve (AUC), calibration will be assessed using a calibration plot and formally tested using the Hosmer and Lemeshow goodness-of-fit test, and model fit will be quantified as Nagelkerke’s R2. Internal validation will be performed using bootstrapping-resampling to yield a measure of overfitting and the optimism-corrected AUC.

Discussion

The results of this study will improve the understanding of prognostic and potential protective factors, which will help clinicians guide their clinical decision making, develop an individualized treatment approach, and predict chronic neck pain more accurately.

Introduction

Neck pain is one of the most prevalent and disabling health conditions, with a substantial impact on public health [1, 2]. The Global Burden of Disease study demonstrated that neck pain is third in the ranking of ‘years lived with disability’ in non-fatal diseases in Europe [3]. Costs related to neck pain are rising mainly due to extended work absence and usage of health care services [1, 4, 5]. In particular, neck pain that becomes chronic causes high healthcare costs [6]. The prevalence of chronic neck pain has increased from 2005 to 2015 by 21% up to approximately 358 million people worldwide, and it is likely to increase further in Western countries due to an aging population [7]. In the Netherlands, pain in the cervical region is the most commonly reported complaint for which patients seek help in physiotherapy practices [8].

Recovery from neck pain and related disability mainly occurs in the first few weeks. Thereafter, the recovery rate is much lower [9, 10]. The reported effect of physiotherapy treatment in patients with chronic musculoskeletal pain is, at best, only moderate [1113]. It is therefore not surprising that defining the natural course and the prognostic factors in people with acute- and subacute neck pain is a top-five priority of the new agenda for Neck Pain Research [14]. Knowledge of prognostic factors can help health care providers to improve clinical decision-making and is a likely key factor in combatting chronification of idiopathic neck pain. Preventing chronicity should be the major focus of physiotherapists in the (sub)acute phase of musculoskeletal pain. Being able to predict which patients with neck pain are likely to develop chronic pain may help prevent chronification of pain in physiotherapy practices.

At the present time the existing literature on prognostic models shows a low performance in predicting chronicity or recovery from neck pain [15, 16], it is thereby not applicable as a starting point for a new prognostic study. A limitation and possible explanation of this low performance is the inclusion of a too-heterogeneous group of neck pain patients. Most studies include (sub)acute neck pain, whiplash-related neck pain, pain with neurological symptoms, and even patients who already have chronic pain [15, 17, 18], although these groups are known to differ in both clinical symptoms and prognosis [1921]. Therefore, it seems useful to pay attention to the pain etiology and pathophysiological mechanisms of the existent pain in classification and inclusion systems [22].

In addition, prognostic research has often focused on factors that are non-modifiable by physiotherapists, such as age and sex [16]. Only clinically modifiable factors have the potential to change patient outcome and are therefore recommended to be included in prognostic research [16, 23]. However, to strengthen a prognostic model, it can be relevant to include some non-modifiable factors. Based on a recent consensus study of potential modifiable prognostic factors, including psychosocial factors in prognostic research for chronification is relevant [24]. It seems that psychosocial factors in particular can be modified. Furthermore, it is known that neurophysiological changes in the chronification of pain are modulated by psychosocial factors [25].

Therefore, there is a need for a prognostic study that identifies modifiable prognostic factors using a biopsychosocial view, that includes only patients with acute- (0 to 3 weeks) or subacute (4 to 12 weeks) nonspecific idiopathic, non-traumatic neck pain, to help prevent chronification of pain in physiotherapy practices. This study should occur in primary care physiotherapy practices and with a cohort of patients of an adequate sample size.

The primary objective of this study is to identify which modifiable and non-modifiable factors are independent predictors of the development of chronic pain in patients with acute- or subacute nonspecific idiopathic, non-traumatic neck pain, and secondly, to combine these to develop and internally validate a prognostic prediction model.

Methods

Study design

The present study is a prospective cohort study of prognostic factors informed by the PROGRESS framework and TRIPOD statement type 1b and specific recommendations for statistical approaches to Type 3 prognostic model research [26, 27]. This study will be reported in accordance with the Transparent Reporting of a multivariable prediction model for Individual Prognosis Or Diagnosis (TRIPOD) statement [27].

Study setting

Potential participants will be selected from 30 primary care physiotherapy practices including 81 physiotherapists between January 26, 2020, and August 31, 2022, and is due to be completed at March 17, 2023 (including reminders and time for response).

For the generalizability of this research, we selected physiotherapists with different backgrounds; physiotherapists pursuing a master’s degree working in primary care and experienced physiotherapists with and without affiliation to an academic institute will include participants.

Ethical approval

The Medical Research Ethics Committee approved that this study (protocol number: 19-766/C) does not apply to the Medical Research Involving Human Subjects Act (WMO). Therefore an official approval of this study by the Medical-Ethical Review Committee (METC) Utrecht is not required under the WMO Utrecht. All data is processed anonymously, and all participants have to sign an informed consent. The participants receive a personal code upon inclusion, which must be submitted at each measurement moment. The measurements will be collected through the secure data transfer system Formdesk [28].

Participants

The patients will be approached if they present with a new episode of acute- (0 to 3 weeks) or subacute (4 to 12 weeks) nonspecific idiopathic, non-traumatic neck pain. To be eligible to take part in the study, participants must meet the following criteria:

  1. The patients are at least 18 years or older.

  2. The patients have a new presentation of neck pain not more than 12 weeks upon onset.

  3. The neck pain region has to fall within the used region presented in Fig 1.

  4. If the patient has had neck pain before, the patients must be relatively free from symptoms for at least three months (Numeric Pain Rating Scale (NPRS) of < 3) prior to this new episode of neck pain.

Fig 1. Neck pain area used for inclusion [31].

Fig 1

These inclusion criteria will effectively exclude the population with chronic pain [29, 30].

The following general and specific exclusion criteria will be examined at an initial history taking by the physiotherapist prior to the recruitment:

Specific exclusion criteria

  1. Neck surgery in the past.

  2. Cervical spine radiculopathy measured with the Upper Limb Neurodynamic Test 1 [32].

  3. Widespread pain (ICD 11); diffuse musculoskeletal pain in at least 4 of 5 body regions and in at least 3 or more body quadrant (as defined by upper-lower / left-right side of the body) and axial skeleton (neck, back, chest, and abdomen).

  4. Pain not caused by a musculoskeletal origin (not located in in the muscles, bones, joints, or tendons) [33].

General exclusion criteria

  1. Inability to read or understand the Dutch language.

The participating physiotherapists record reasons for exclusion during the study period. In addition, an anonymized record will be kept of patients who meet the inclusion criteria but choose not to participate and their reasons for doing so. The treatment the patients receive will be reported. The coding will be done based on the Dutch Physiotherapy Guideline for neck pain [34, 35]. Participation in this study has no influence on the content of the treatment.

Baseline and follow-up procedure

If the patient meets the criteria during the first consultation, the physiotherapist informs the patient orally about the purpose and discusses participant expectations of the study. If the patient indicates verbally that he/she wants to participate in the study, written informed consent is obtained from the participant before the first questionnaire is completed. Subsequently, each participant receives a digital questionnaire sent via a link by email in week one (T0, baseline) and at six weeks (T1), three months (T2), and six months (T3). The T0 questionnaire takes 30–40 minutes to complete, the T1 measurement 20–30 minutes, and the T2 and T3 around 20 minutes. If the participant has not completed a questionnaire after one week, a reminder is sent by email or telephone contact will be made by the therapist who includes the participant. This procedure is repeated one week later, if necessary.

Outcome

The NPRS is used to quantify the presence of chronic pain. If pain is present at all measurement moments, six weeks, three months, and six months with a score of NPRS ≥3, it will be classified as chronic pain [30, 36]. The NPRS is known to have an average reliability (ICC = 0.67 [0.27–0.84]) in neck pain, the minimal detectable change is 2.6 and a minimum clinically important difference of 1.5 in patients with mechanical neck pain [37]. The NPRS is an inventory and evaluation questionnaire, which was found to be valid [38].

Candidate prognostic factors

The candidate prognostic factors are based on our previous systematic review and Delphi study [16, 24]. From the systematic review, we included the variables significantly predictive of pain chronification or non-recovery. Furthermore, we included the variable with a consensus of >70% in the first round of our Delphi study.

Table 1 shows the researched domains, candidate prognostic factors, the measure method used and how the variables will be handled in the statistical analysis.

Table 1. Candidate prognostic factors.

Candidate prognostic factors Measure Range of the scale Handling variables in statistical analysis
Patients’ characteristics
Sex Self-report question Male / Female Dichotomous
Age Self-report question Age in years Continuous
Symptoms
Pain intensity at baseline Numeric Pain Rating Scale (NPRS)
“On a scale of 0 to 10, how much pain do you experience? Where 0 is no pain at all and 10 is the most imaginable pain”
0–10
Higher scores indicate a higher degree of pain.
Continuous
Duration of neck pain In weeks Number of weeks Continuous
Reported pain in different body regions Self-report question:
Do you also experience pain in other parts of your body?
Yes / No Dichotomous
Accompanying headache Self-report question:
Have you experienced accompanying headache(s) since you have neck pain?
Yes / No/ I had headache(s) before the neck pain. Dichotomous
1 = Yes
2 = No or I had headaches before the neck pain
Disability Pain Disability Index (PDI) is a 7-item questionnaire to investigate the magnitude of self-reported pain-related disability. The PDI measures family/home responsibilities, recreation, social activity, occupation, sexual behavior, self-care, and life support [39] 0–70
Higher scores indicate higher interference of pain with daily activity.
Continuous
The sum score will be divided by the entered items.
Work related factors
Happiness at work* Self-report question:
Can you indicate how happy you are with your current job?
Five point Likert scale.
  • Totally unhappy

  • Not happy

  • Neutral

  • Happy

  • Totally happy

Dichotomous
1 = Happy (happy and totally happy)
2 = Not happy (totally unhappy, not happy and neutral)
Job satisfaction* Self-report question:
How much satisfaction do you get from your current job?
Five point Likert scale.
  • Totally no satisfaction

  • No satisfaction

  • Neutral

  • Satisfaction

  • A lot of satisfaction

Dichotomous
1 = Satisfied (satisfaction and a lot of satisfaction)
2 = Not satisfied (totally no satisfaction, no satisfaction and neutral)
Potential to self-modify posture* Self-report question:
Are you able to change positions regularly during your work?
Five point Likert scale.
  • Completely impossible

  • Impossible

  • Neutral

  • Possible

  • Completely possible

Dichotomous
1 = Possible
2 = Impossible
General factors
Lifestyle
Physical activity
Measured by the activity level according to the Dutch Healthy Exercise Norm Dived into three categories:
  1. I don’t move 30 minutes any day a week of moderate intensity.

  2. I’m exactly in between one and three

  3. I am five days or more active per week

Dichotomous
1 = Achieving the Dutch Healthy Exercise Norm (category 3)
2 = Not achieving the Dutch Healthy Exercise Norm (category 1 and 2)
Smoking Self-report question:
Do you smoke?
Yes / No Dichotomous
Alcohol Self-report question:
Do you drink alcohol?
Yes / No Dichotomous
Length and weight Self-report question:
What is your height?
What is your weight?
Body Mass Index (BMI): weight/(length x length in meters) Dichotomous
Sleep quality Adjusted sleep quality question from the Neck Disability Index (NDI) and is subdivided in 4 domains; (1) wake up rested, (2) number of hours disturbed while sleeping, (3) fall asleep, and (4) personal experience sleep quality (1) Yes / No
(2) 0–5 Higher scores indicate more hours disturbed while sleeping
(3) Yes / No difficulty falling asleep
(4) Yes / No personal experience difficulty sleeping or falling asleep
Dichotomous
1 = No negative experience with sleeping (No negative score on one of the four domains)
2 = Negative experience with sleeping (a positive score on one of the four domains)
Psychological and behavior factors
Catastrophizing Pain Catastrophizing Scale (PCS) short version is a 6-item questionnaire that assesses catastrophic thoughts or feelings associated with the experience of pain [40] 0–24
Higher scores indicate more catastrophic thoughts
Continuous
Illness beliefs about recovery Brief Illness Perception Questionnaire-Dutch language version (IPQ-DLV)
Two single questions:
How long do you think your neck pain will continue?
How concerned are you about your illness?
0–10
0 a very short time– 10 forever
Higher scores indicate a maladaptive illness perception
0 not at all concerned– 10 extremely concerned
Higher scores indicate a maladaptive illness perception
Continuous
Treatment beliefs Brief Illness Perception Questionnaire-DLV [41]
Single question:
How much do you think your treatment can help your neck pain?
0–10
0 not at all—10 extremely helpful
A lower score indicates a maladaptive illness perception
Continuous
Depression Depression Anxiety Stress Scale 21-item version (DASS-21) [42] 0–21
Higher scores indicate a higher degree of depression
Continuous
Kinesiophobia Tampa Scale for Kinesiophobia (TSK) 11-item version [43] 11–44
Higher scores indicate a higher degree of kinesiophobia
Continuous
Distress Depression Anxiety Stress Scale 21-item version (DASS-21) [42] 0–21
Higher scores indicate a higher degree of stress
Continuous
Coping Pain Coping Inventory (PCI) [44] is a 33-items questionnaire and is subdivided into six scales: pain transformation, distraction, reducing demands, retreating, worrying, and resting Transforming the classification into an active (pain transformation, distraction and reducing demands) and passive coping strategy (retreating, worrying, resting) Active coping = 12–48
Passive coping = 21–84
Dichotomous
Illness beliefs about pain identity Brief Illness Perception Questionnaire-DLV [41]
Single question:
How well do you feel you understand your illness?
0–10
0 don’t understand at all—10 understand very clearly
A lower score indicates a maladaptive illness perception
Continuous
Hypervigilance Pain Vigilance Awareness Questionnaire (PVAQ) [45] 0–80
Higher scores indicate a higher degree of vigilance
Continuous
Self-efficacy Pain Self-efficacy Questionnaire 2-item version [46] 0–12
Higher scores indicate a higher degree of self-efficacy
Continuous
Remaining factors
Health care provider attitude* Two vignettes consisting of 8 multiple choice questions and 4 open questions
The open questions focused on the history taking, examination and treatment strategy
The multiple-choice questions focus on the advice of the therapist with regard to categorizing of the complaint in type of seriousness, resumption of work and the implementation of daily activities
Biomedical
Biopsychosocial
Dichotomous
Therapeutic relation* Self-report question
How much trust do you have in your healthcare provider/ physiotherapist?
0–10
0 no trust at all– 10 very much confidence
Continuous

*Candidate prognostic factors measured by an unvalidated measurement.

Symptoms

The symptoms are current pain intensity (measured with the NPRS), duration of the neck pain in weeks, and whether the patient experiences pain in multiple body regions, all measured with a single question. Duration of pain will be handled as a continuous variable in our statistical analysis since there is no hard cut-off point between ‘acute’ and ‘sub-acute’ pain. Headaches are surveyed using a three-categorical single question to dichotomize specifically ‘headaches that originated together with neck pain’ and ‘no headaches or headaches that exist before the neck pain’.

The Pain Disability Index (PDI) is a 7-item questionnaire that investigates the extent of self-reported pain-related disability [39]. The PDI measures family/home responsibilities, recreation, social activity, occupation, sexual behavior, self-care, and life support. The questionnaire items are assessed on a 0–10 numeric rating scale in which 0 means no disability and 10 is maximum disability.

Work related factors

The questions about happiness at work, job satisfaction, and the potential to self-modify posture during work are non-validated questions of which the psychometric properties are unknown and have been developed and formulated based on a Delphi study [24]. These are all answered on a Likert scale (1–5), which will be dichotomized in the statistical analysis (Table 1).

General factors

Lifestyle is measured with self-reported questions on different lifestyle domains; physical activity, smoking, alcohol, weight, and sleep quality.

Sleep quality is questioned through an adjusted question from the Neck Disability Index (NDI). The question was adjusted based on a Delphi study, which indicates that the NDI does not sufficiently question the ’sleep quality’ factor [24]. For this reason, the statements "I do not wake up in the morning rested" and "I have trouble falling asleep" were added to the existing 9th question of the NDI questionnaire [47]. Since the question was modified, no psychometric properties are known.

Psychological and behavior factors

Catastrophizing is measured with a shortened validated 6-item version of the Pain Catastrophizing Scale (PCS) that assesses catastrophic thoughts or feelings associated with the experience of pain. Participants are asked to think about a recent painful experience and indicate to what extent they experience each of the six thoughts or feelings when they are in pain. The short version of the PCS assesses each dimension to capture the broad construct of catastrophizing; it compromises the lower-order factors labeled as rumination, magnification, and helplessness [40]. It uses a 5-point scale ranging from 0 (not at all) to 4 (always) [48]. A shortened version of the PCS is used to limit the total measurement duration. Internal, construct, and the smallest detectable change (SDC) are highly comparable to the original PCS [40].

Kinesiophobia is measured using the Tampa Scale for Kinesiophobia 11-item version (TSK-11). This short version assesses both dimensions of kinesiophobia; harm and activity avoidance. The eleven questions are scored from 1 (strongly disagree) to 4 (strongly agree). The psychometric properties of the TSK-11 demonstrate good internal consistency (α = 0.79), responsiveness (SRM = -1,11), test-retest reliability (ICC = 0,81, SEM = 2.54), concurrent validity and predictive validity [43].

In a (sub)acute state of pain, a response such as fear of movement or negative orientation toward pain could exist. However, it is not known when this response is a beneficial level of adaptation or an excessive response to (sub)acute pain. Furthermore, whether it is associated with developing chronicity in neck pain, a specific cut-off point to differentiate between these two levels does not exist. Therefore, our analyses will address catastrophizing and kinesiophobia as continuous factors.

The Depression Anxiety Stress Scale– 21 (DASS-21), recommended by Bijker et al. (2020) [49], is used to map the degree of stress and depression. The DASS-21 consists of 21 questions with three subscales: depression, anxiety, and stress. Each subscale consists of 7 questions with the answer ranging from 0 (not applicable at all or never applicable) to 3 (very definitely or mostly applicable) [42]. The internal consistency and test-retest reliability are sufficient for the DASS, and the convergent and divergent validity was supported [42].

The coping strategy of people with pain symptoms is measured through the Pain Coping Inventory List (PCI). This 33-item questionnaire reliably assesses six specific cognitive and behavioral strategies [44, 50]. The sensitivity and reproducibility of the PCI are acceptable [44]. Transforming the classification into an active or passive coping strategy is included in the content and construct validity. However, it has been validated in studies on chronic pain patients who experience physical complaints or (dis)function [50]. The items are scored using an ordinal measurement level from 1 (rarely) to 4 (very common).

The illness perceptions are measured with the Illness Perception Questionnaire–Dutch language version (IPQ-DLV) [41]. The IPQ-K is a cross-culturally adapted Dutch version of the Brief Illness Perception Questionnaire (BIPQ) [51]. Four out of eight questions from the IPQ-DLV were included in this study to measure patients’ illness perceptions about recovery, treatment beliefs, and pain identity. The IPQ-DLV is an easy-to-understand questionnaire for patients and healthcare professionals. Each question represents a different disease perception with a different outcome measure. The items are scored using an ordinal measurement level from 0–10. The questionnaire has moderate to substantial reliability, acceptable face validity, and acceptable content validity [41]. The IPQ-K is an inventory questionnaire that can also be used evaluatively [41]. The reproducibility appeared to be moderate to good [5153].

The degree of vigilance is assessed by the 16-item Pain Vigilance Awareness Questionnaire (PVAQ). Respondents are asked to think about their behavior in the past two weeks and indicate how often each item is a true reflection of their behavior or feelings. This questionnaire labeled two factors: “attention to pain” and “attention to changes in pain”. The degree of vigilance is rated on a 6-point scale ranging from 0 (never) to 5 (always) [54, 55]. The PVAQ showed good validity, and internal consistency and fair test-retest reliability [45, 54].

The short version of the Pain Self-Efficacy Questionnaire (PSEQ-2) is a robust measure of pain self-efficacy and is recommended by Sleijser-Koehorst et al. (2019) [56]. It appears to be suitable for use in clinical and research settings [46].

Remaining modifiable factors

The therapist’s orientation, biomedical (BM) or biopsychosocial (BPS), is assessed by asking the therapist to fill in two vignettes. Vignettes are a realistic simulation of case situations in daily practice to measure of diagnosis or evaluation by health care providers. It is a promising quality rating for estimating the clinical behavior of care providers and, if constructed correctly, is a valid measuring instrument [57, 58]. Vignette 1 (acute non-specific neck pain) consists of open questions (4) and multiple-choice questions (4). The open questions focus on the history taking, examination, and treatment strategy. The multiple-choice questions focus on the therapist’s advice concerning the complaint in type and seriousness, resumption of work, and of daily activities. Vignette 2 (chronic non-specific neck pain) consist only of the multiple-choice questions (4). The vignettes used are based on standardized vignettes on low back pain [59].

In order to categorize the therapists (BM or BPS), the SCEBS method is used, covering Somatic, Psychological (Cognition, Emotion, and Behavior), and Social dimensions [60]. A therapist with a biomedical orientation believes in a biomedical model of disease, where disability and pain are a consequence of a specific pathology within the spinal tissues, and treatment is aimed at treating the pathology and alleviating the pain [59]. A therapist with a biopsychosocial orientation believes in a biopsychosocial model of disease in which pain does not have to be a consequence of tissue damage and can be influenced by social and psychological factors [59]. The open questions are scored on the emergence of the different dimensions of the SCEBS, whereby the somatic dimension scores as a more biomedical orientation, and the dimensions cognition, emotion, behavior, and social score as biopsychosocial orientation. The multiple-choice questions score as a more biomedical orientation if the therapist is more likely to rate for spinal pathology, recommend a delay in return to work and daily activity [6163]. The scores are merged at the end to a sum score, which categorize a therapist as BM or BPS. Every therapist is categorized by two researchers individually; after scoring, there will be a consensus meeting between the two researchers. A third reviewer makes the final decision if consensus cannot not be reached.

Therapeutic relation is measured by a self-developed single question of which psychometric properties are unknown and was formulated based on a Delphi study [24].

Sample size

To ensure the sample size is adequate in terms of the number of participants (n) and outcome events (E) relative to the number of predictor parameters (p) considered for inclusion, the minimum number of events per predictor parameter (EPP) is calculated recommended by Riley et al. (2019) [64]. To reduce the risk of overfitting and to ensure that the overall risk is estimated precisely, the following criteria need to be met: (1) small optimism in predictor effect estimated as defined by a global shrinkage factor of ≥ 0.85, (2) small absolute difference of ≤ 0.05 in the model’s apparent and adjusted Nagelkerke’s R2, and (3) precise estimation of the overall risk of rate in the population or similarly, precise estimation of the model intercept when predictors are mean-centered [64]. The calculation of the expected value of the (Cox-Snell) R-squared of the new model is based on two included prognostic models and is estimated at R2 = 0.23 [16, 65, 66]. The outcome events (E) are estimated at 45% based on a systematic review by dividing the included number of patients by the number of non-recovery of pain [16]. The number of included candidate predictor parameters for potential inclusion in the new model is based on a systematic review and a consensus study and is estimated at 26, of which 4 are non-modifiable and 22 are potentially modifiable. The a priori sample size calculation for the prognostic model suggests to include a minimum of 598 participants.

Statistical analysis methods and missing data

The statistical analysis is based on the ‘Prognosis Research Strategy (PROGRESS) framework’ type 3 research [26], in which the step-by-step plan will be roughly as follows:

  • Analysis of cases with and without the development of the outcome events (whether or not they developed chronic pain, respectively) will be done to determine if there are significant differences. In case > 5% of incomplete records, data will be imputed. A multiple imputation strategy will be followed in case we assume data are at least missing at random. The number of imputations will be set to the percentage of incomplete records. Imputed values for continuous variables will be drawn using predictive mean matching. In case of evidence of data being MAR (or MCAR), the MAR assumption will be assessed by making a missingness indicator and testing whether incomplete patients differ from those that are incomplete.

  • Identifying the independent predictive capacity of the candidate prognostic variables at baseline and the existence or non-existence of chronic pain measured at six weeks, three, and six months by univariable logistic regression analysis. These analyses will not be used to decide which prognostic factors will be included in the multivariable analyses.

    If the sample size, as calculated, turns out to be adequate, all variables will be include in the multivariable analyses.

  • Multicollinearity between candidate predictors will be assessed using the variance inflation factor. In case the variance inflation factor exceeds 10, we will select which candidate predictor add to the modeling phase based on clinical expertise.

  • The non-variable factors of age, gender, and duration of the pain will be included to strengthen our model. The discriminative ability of the prognostic model will be determined based on the Area Under the receiver operating characteristic Curve (AUC), calibration will be assessed using a calibration plot and formally tested using the Hosmer and Lemeshow goodness-of-fit test, and model fit will be quantified as Nagelkerke’s R2.

  • Internal validation will be performed using bootstrap resampling to estimate the optimism-corrected AUC and to yield a measure of overfitting (i.e., the shrinkage factor). The shrinkage factor (a constant between 0 and 1) will be used to multiply the regression coefficient by. Generally, regression coefficients (and resulting predictions) are too extreme in case of overfitting, which is counteracted by the shrinking of regression coefficients.

Discussion

This prospective cohort study will be the most extensive study in this field to determines prognostic factors for the chronification of acute- or subacute nonspecific idiopathic, non-traumatic neck pain in primary care physiotherapy. In contrast to most other prognostic research studies, this study has a biopsychosocial view and focuses specifically on potentially modifiable factors by a physiotherapist. By selecting patients in primary care physiotherapy practices, we assume that they will represent the usual population consulting the physiotherapist with neck pain. The results of this study will improve the understanding of prognostic and potential protective factors, which will help clinicians guide their clinical decision making, develop an individualized treatment approach, and predict chronic neck pain more accurately.

The candidate prognostic factors in this study are mostly modifiable. The non-modifiable factors of increasing age, sex, duration of neck pain, and reported pain in different body regions have a known prognostic value for neck pain patients [10, 15, 16, 67]. Therefore these will be included in the model development to strengthen the value of our prognostic model. However, their non-modifiable nature means that they have limited use in potential prevention strategies. To pursue the clinical applicability of the model, other potentially relevant and modifiable factors are selected for inclusion based on our systematic review and international Delphi study.

Strengths and limitations

This study includes critical methodological features in order to minimize bias. These features include sampling a representative cohort from a physiotherapy setting with a high follow-up rate [68]. A new strategy for a representative sample size will be used. The rule-of-thumb events per variable (EPV) of ≥ 10 is widely used in the medical literature as the lower limit for developing prediction models that predict a binary outcome. However, this generally accepted minimal sample size criterion has been found lenient when default stepwise predictor selection strategies develop prognostic models. Earlier critiques on EPV as a sample size criterion have identified its weak theoretical and empirical underpinning [69].

The new strategy to achieve an accurate sample size offers us space for 26 candidate prognostic factors in model development to avoid overfitting in our analyses. Because more candidate prognostic factors can lead to model overfitting in small data sets, spurious observed relationships can occur because of regression value distortion and an overestimating predictive performance [64, 70]. The 26 candidate prognostic factors permitted are selected based on our previous systematic review and Delphi study to include only relevant and potential important factors.

Although this study does not influence the therapy the participants receive, the given therapy may influence the outcome and the accuracy and transportability of the model to be developed [71]. The patients receive standard care based on the Dutch Physiotherapy Guideline for neck pain [34]. They may include therapy to modify our candidate prognostic factors and thereby have a risk-reducing effect on chronicity. In addition, there may also be a form of ‘background treatment’; this could include any other treatment that an individual received during our prognostic study (e.g., psychological care) or changes an individual makes to their lifestyle [71]. We will have no information on this form of treatment during this study; however, it could influence the outcome. Nevertheless, we consider the impact on our study findings to be minimal, given (1) the heterogeneity of the factors to be modified, (2) the multiple modalities used by physiotherapists, and (3) the difference in physiotherapists’ backgrounds. Thereby, we will report the physiotherapy treatment the patient received and discuss the possible impact on our study findings (TRIPOD 5C) but do not include the different treatments as a predictor in our model. Moreover, the current setting does reflect clinical practice as it is. This heterogeneity is likely to remain even after implementing of a well-performing model.

Clinical message and future directions

This study protocol describes only the first phase of prognostic model research; model development (including internal validation). Our model should be externally validated using data from another dataset to assess the generalizability of our prognostic model [72]. Thereafter, investigations of impact on decision-making and patient outcomes have to be done to measure our study’s clinical relevance and impact.

Acknowledgments

We want to thank all the physiotherapists who will include and follow their patients for six months. We would also wish to extend our special thanks to all the patients who will participate in this research.

We want to thank all reviewers, Assoc. Prof. Dr. Farnaza Ariffin, Prof. Alice Kongsted, Prof. Saud M. Al-Obaidi Phd PT, and Ass. Prof. Yousef Alshere, for taking the time and effort necessary to review the manuscript. We sincerely appreciate all valuable comments and suggestions which helped us improve the manuscript’s quality.

Data Availability

Data sharing is not applicable to this article as the current study describes the protocol for the data analysis. For the results paper, the datasets generated during and/or analysed during this study will be made available in an open access repository.

Funding Statement

This PhD trajectory and research is partly supported by the Institute of Movement Studies and partly by the Utrecht University of Applied Sciences research voucher. The funding concerns am internal promotion voucher of the University of Applied Sciences. The funders had no role in the study design, data collection, analysis, decision to publish, or manuscript preparation.

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Decision Letter 0

Aqeel M Alenazi

18 Oct 2022

PONE-D-22-19562

A study protocol for the validation of a prognostic model with an emphasis on modifiable factors to predict chronic pain after a new episode of acute- or subacute nonspecific idiopathic, non-traumatic neck pain presenting in primary care.

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Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Does the manuscript provide a valid rationale for the proposed study, with clearly identified and justified research questions?

The research question outlined is expected to address a valid academic problem or topic and contribute to the base of knowledge in the field.

Reviewer #1: Yes

Reviewer #2: Partly

Reviewer #3: Yes

Reviewer #4: Yes

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2. Is the protocol technically sound and planned in a manner that will lead to a meaningful outcome and allow testing the stated hypotheses?

The manuscript should describe the methods in sufficient detail to prevent undisclosed flexibility in the experimental procedure or analysis pipeline, including sufficient outcome-neutral conditions (e.g. necessary controls, absence of floor or ceiling effects) to test the proposed hypotheses and a statistical power analysis where applicable. As there may be aspects of the methodology and analysis which can only be refined once the work is undertaken, authors should outline potential assumptions and explicitly describe what aspects of the proposed analyses, if any, are exploratory.

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: Yes

Reviewer #4: Yes

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3. Is the methodology feasible and described in sufficient detail to allow the work to be replicable?

Descriptions of methods and materials in the protocol should be reported in sufficient detail for another researcher to reproduce all experiments and analyses. The protocol should describe the appropriate controls, sample size calculations, and replication needed to ensure that the data are robust and reproducible.

Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: Yes

Reviewer #4: Yes

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Reviewer #1: No

Reviewer #2: No

Reviewer #3: Yes

Reviewer #4: No

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5. Is the manuscript presented in an intelligible fashion and written in standard English?

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Reviewer #1: Yes

Reviewer #2: Yes

Reviewer #3: Yes

Reviewer #4: Yes

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6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above and, if applicable, provide comments about issues authors must address before this protocol can be accepted for publication. You may also include additional comments for the author, including concerns about research or publication ethics.

You may also provide optional suggestions and comments to authors that they might find helpful in planning their study.

(Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: Dear author, here are my comments

1. Title: acceptable and represents the study objective

2. Introduction: acceptable

3. Objective in the manuscript protocol MUST be the same as the objective in the abstract. Suggest to focus on the modifiable. (please correct the manuscript objective)

4. the inclusion and exclusion criteria are not coherent. Also, the arrangement of the inclusion and exclusion criteria are confusing. Start with inclusion criteria: Patients are 18 years and older; those with a new presentation of neck pain not more than 12 weeks upon onset; no (3); no (4) then for exclusion criteria, What does generalized pain mean? please specify is it generalized all over body pain? and also please arrange according to general and specific exclusions.

5. For the outcomes, there are a lot of scales that you want to use. Please provide a table of the main outcome and all the other outcome measures which includes the scales you are using.

In general, this is a comprehensive study and will provide valuable information for the prognosis of chronic pain among those presenting with acute / subacute neck pain. However, the manuscript protocol needs some adjustment and correction to make it more succinct and understandable to the readers.

Thank you.

Reviewer #2: Thanks for the opportunity to review this protocol. As the data collection is almost finished, I have focused on the reporting of the protocol rather than the design. Generally, I find it clearly reported and the study well thought through.

A few comments for the author to consider.

The study is described as PROGRESS Type 3, consider adding that it is a type 1b according to TRIPOD.

Candidate prognostic factors:

As you are clearly aware, most developed prediction models end out being of little value, because they do not perform well outside of the development sample. Knowing that, I am not sure why you did not use an existing model as starting point and then updated with new predictors if relevant. Please consider addressing that in the introduction or discussion.

For some of the factors listed in Table 1, which are not presented as “unvalidated”, there is no reference provided to the validation of the measure. Please make sure that you either provide supporting information or state it is an unvalidated measure.

You argue for the use of age, gender, and symptom duration in addition to potentially modifiable factors. I agree with that decision but think the same argument would apply to for instance socioeconomic factors. Consider addressing why you see these differently than age, gender, and duration. I follow your argument why it is most helpful to identify modifiable factors, but if unmodifiable are strong determinants of outcome that is important for informing management strategies as well.

Outcome:

Please report the wording of the pain intensity measure (current pain, average pain last x weeks, or??) Note that you have used NPRS for ”Numeric pain rating scale” and for “Neck pain rating scale”.

Analysis plan:

The description of how you will determine if missing data is missing at random is not really clear to me. Consider if it needs rewording.

It is not clear why you perform the univariable analyses. I think it is fine to present these to inform readers about their relationship with the outcome. Perhaps state directly that univariable analyses are not used to decide which prognostic factors will go into the multivariable model.

I am not a fan of considering the inclusion of age and gender an “adjusted” prediction model. I think that tends to mix concepts between prediction and causation. In prediction models, all included variables potentially contribute to predictive performance. You may consider investigating if modifiable predictors interact with age or gender if the sample size allows for that.

Your plan for model reduction is somewhat hidden under internal validation. It would be useful to briefly describe how shrinkage will be used to remove potential predictors. How close to zero should the coefficient by after shrinkage for the factor to be removed from the model?

I recommend that you report how you plan to compare the performance to existing prediction models, including which models you will compare to. How will you determine if it is worthwhile moving on to external validation?

Reviewer #3: PLOS ONE PONE-D-22-19562

A study protocol for the validation of a prognostic model with an emphasis on modifiable factors to predict chronic pain after a new episode of acute- or subacute nonspecific idiopathic, non-traumatic neck pain presenting in primary care.

I highly commend the authors for their high quality work and the potential prospect impact on health care and clinical decision making in the care of neck pain and prediction of potential factors that may lead to chronicity, in deed this is a great valuable research efforts.

However, the following is my humble criticism

Objectives

You wrote ;

“The primary objective of this study is to identify which modifiable and non-modifiable factors are independent predictors of the development of chronic pain in patients with acute- or subacute nonspecific idiopathic, non-traumatic neck pain, and secondly, to combine these to develop and internally validate a prognostic prediction model”.

*With regards to the objectives I fully I agree with the authors . Their objectives are legitimate and rational , and these kind of studies is needed to improve the clinical work of physiotherapist.

However, I should point out that because there is a synchronized positive relationship between pain, and fear related illness behaviors in acute sage most of the psychological factors cannot be modifiable at acute stage because it is natural response to pain. However, this relationship may vanish or persist in most people following subacute stage and may be reinforced in others due to selected environmental biopsychosocial factors as you indicated. The role of the psychological factors mainly fear of/ anticipation of pain and catastrophizing continue to develop and reinforce the pain and related behavior beyond the subacute stage, so the argument that may arise her is whether the emphasis should be directed to screen for the most frequent reinforcers found in the chronic stage and then to be used later in acute or subacute stage as prognosis predictors so that the therapist screen to identify and modify.

Study Settings

You have large Number of physiotherapist included in the study this may have advantage or disadvantage specifically, related to these individual knowledge and understanding of the biopsychological factors, and skills in screening, or treatment implementation of these knowledge in their workplace this may need to elaborated on don you agree .

Participant

“The patients are at least 18 years or older”

Neck pain is common among adults, although it can occur at any age. Are you a wear of the Global Burden of Diseases 2017 study, it demonstrated that the point prevalence of neck pain peaked during the middle ages with the highest burdens in people age 45–49 and 50–54 for men and women, respectively.

Kazeminasab, S., Nejadghaderi, S.A., Amiri, P. et al. Neck pain: global epidemiology, trends and risk factors. BMC Musculoskelet Disord 23, 26 (2022). https://doi.org/10.1186/s12891-021-04957-4

Therefore, including young participant starting from age 18 years may not reflect the day today patient volume in any physical therapy clinical setting. In addition, young individuals are motivated, highly active and may have different biopsychosocial factors than the adults or senior individual.

You may need to reflect on the young age pain behavior psychology if you have a huge number of young individuals or eliminate young individuals as a sub population in your study.

Item 4 “If the patient has had neck pain before, the patients must be relatively free from symptoms for at least three months”

My question to you is how would you assume that this patient has no learning effect from his previous episodes pain related fear experience and behavior , I though you needed an individuals with totally knew pain experience to be able to demonstrate a good predicting tool.

I have reviewed the Delphi survey and your systematic survey I think I perceived that unhealthy life style and physical inactivity were considered separate variables,

I also did not find any mentioned to somatization in your factors, this was mentioned earlier by the Delphi survey could you define it and further elaborate why it was not included

• Her is another confusing problem for the prognostic tool you are about to produce and please allow me to elaborate and explain my worries and its all centered around Kinesiophobia.

Kinesiophobia defined as “an excessive, irrational, and debilitating fear of physical movement and activity resulting from a feeling of vulnerability due to painful injury or reinjury”

It is by itself a central factor in the process of pain developing from acute to chronic stages, The Cognitive Fear Avoidance Model describes that very clearly , it also linked it strongly to catastrophizing, re/injury, avoidance behaviour, and on the long run inactivity, disability, depression, low self-esteem and increasing the risk for a wide range of health problems, functional decline and premature death.

My question is

You have included so many independent factors that have high potential prognostic ability alone, so it become very difficult and confusing to understand the weighting of theses variables to the final prediction scores on your prognostic tool while in reality each one of which is so representative and highly weighted predictor itself such as kinesiophobia , depression, anxiety, low self-esteem. Need to elaborate a bit more on this.

Discussion

Line 338-350 I found the following statement very confusing and not helpful to justify the objectives of the study

338. The given therapy may influence the outcome and the accuracy and transportability of the model to be developed.

340. The patients receive standard care based on the Dutch Physiotherapy Guideline for neck pain.

344-345. We will have no information on this form of treatment during this study; however, it could influence the outcome.

You wrote “Nevertheless, we consider the impact on our study findings to be minimal, given ……..”

In their conclusion Carroll LJ, Hogg-Johnson S, van der Velde G, Haldeman S, Holm LW, Carragee EJ, Hurwitz EL, Côté P, Nordin M, Peloso PM, Guzman J, Cassidy JD. Course and Prognostic Factors for Neck Pain in the General Population: Results of the Bone and Joint Decade 2000 –2010 Task Force on Neck Pain and Its Associated Disorders. Eur Spine J. 2008 Apr;17(Suppl 1):75–82. doi: 10.1007/s00586-008-0627-8. Epub 2008 Feb 29. PMCID: PMC2271093. “General exercise was not prognostic of better outcome; however, several psychosocial factors were prognostic of outcome”.

In their discussion they also have specifically stated that “ Prognosis may also depend on whether or not the exercises themselves were designed to impact the

neck and shoulder areas”.

My question

since the author of the above study concluded only on general exercises, but have raised the potential value of specific designed exercise then this raise the concerns about the type of approach used in these multicenter and by the physiotherapist skills and preferences involved in this study .

The benefit and impact of specific approaches as the directed self treatment exercise for the neck used by well trained therapist such as Maitland, McKenzie, or Shacklock M neurodynamic and others on the outcomes has ben well documented such techniques has prognostic value against psychological factors and chronicity.

For example directional preference exercise by the McKenzie approach help the patient face his one fear of painful movement direction while rehearsing in this direction which help centralized improve and prevent the next episodes of pain and fast return to work.

Line 348-350

You wrote

“Thereby, we will report the physiotherapy treatment

the patient received and discuss the possible impact on our study findings (TRIPOD 5C) but do not include the different treatments as a predictor in our model” .

I think you may need to reconsider these statement in light of the variation of approaches among theses centers to reveal the impact of these specific neck exercise approach on modifying the psychological factors

Reviewer #4: I would like to thank the authors for their time and efforts in drafting this protocol study entitled, “A study protocol for the validation of a prognostic model with an emphasis on modifiable factors to predict chronic pain after a new episode of acute- or subacute nonspecific idiopathic, non-traumatic neck pain presenting in primary care”.

I found it to be of interest and very well written. However, the authors may consider clarifying if the participants in their study will be asked to report pain intensity “in the last 24 hours” or “an average pain intensity” because recall of pain may vary.

I strongly suggest that the authors include the operational definitions for acute and subacute neck pain knowing that determining whether a patient fits into the acute or subacute time-period is not always as precise as we would like to think. In addition, I recommend including the participants’ number of previous episodes of neck pain as a factor in the analysis because number of previous episodes is associated with subsequent outcome in musculoskeletal pain symptom.

Although the time-period “0–4 weeks of symptoms” is well-known definition of “acute” neck pain, during analysis, I suggest (if applicable) exploring the relationship between participants prognostic factors at baseline and outcome for a subgroup of patients with acute neck pain with shorter period (0–2 weeks) “high-acute” and (2-4) “mid-acute” of symptoms.

Lastly, one formatting note: I believe the full stop should be placed after the in-text citation.

Thank You!

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Reviewer #1: Yes: Associate Professor Dr Farnaza Ariffin

Reviewer #2: Yes: Alice Kongsted

Reviewer #3: No

Reviewer #4: Yes: Yousef M. Alshehre, PhD

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Attachment

Submitted filename: PONE-D-22-19562.docx

PLoS One. 2023 Jan 17;18(1):e0280278. doi: 10.1371/journal.pone.0280278.r002

Author response to Decision Letter 0


14 Dec 2022

Reviewer 1

In general, this is a comprehensive study and will provide valuable information for the prognosis of chronic pain among those presenting with acute / subacute neck pain. However, the manuscript protocol needs some adjustment and correction to make it more succinct and understandable to the readers.

Comment 1: Objective in the manuscript protocol MUST be the same as the objective in the abstract. Suggest to focus on the modifiable. (please correct the manuscript objective)

Thank you for making us aware of this. We changed the objective in the abstract of our manuscript on page 2, lines 22 - 25.

The primary objective of this study is to identify which modifiable and non-modifiable factors are independent predictors of the development of chronic pain in patients with acute- or subacute nonspecific idiopathic, non-traumatic neck pain, and secondly, to combine these to develop and internally validate a prognostic prediction model.

Comment 2: the inclusion and exclusion criteria are not coherent. Also, the arrangement of the inclusion and exclusion criteria are confusing. Start with inclusion criteria: Patients are 18 years and older; those with a new presentation of neck pain not more than 12 weeks upon onset; no (3); no (4) Ithen for exclusion criteria, What does generalized pain mean? please specify is it generalized all over body pain? and also please arrange according to general and specific exclusions.

Thank you for these suggestions. We have adjusted the order and changed the wording of the inclusion criteria. We now realize that ‘generalized pain’ is not an internationally accepted or precise term. With our exclusion criterion ‘generalized pain’ we meant the widespread pain as described in the ICD 11: chronic primary pain; diffuse musculoskeletal pain in at least 4 of 5 body regions and at least 3 or more body quadrants (as defined by upper–lower/left–right side of the body) and axial skeleton (neck, back, chest, and abdomen).

We changed this exclusion criterion in:

(page 7, lines 137-139) Widespread pain (ICD 11); diffuse musculoskeletal pain in at least 4 of 5 body regions and at least 3 or more body quadrants (as defined by upper-lower / left-right side of the body) and axial skeleton (neck, back, chest, and abdomen).

We also describe the fourth exclusion criterion more specifically. We changed “pain not caused by a musculoskeletal origin” in:

(page 8, lines 140-141) “Pain not caused by a musculoskeletal origin (not located in the muscles, bones, joints, or tendons)” (34).

In addition, we also categorized the exclusion criteria into general and specific (page 8-9).

Comment 3: For the outcomes, there are a lot of scales that you want to use. Please provide a table of the main outcome and all the other outcome measures which includes the scales you are using.

We hope that we have interpreted this comment well, but we think we already provided a Table with that information, please see Table 1 (page 10-12) In this Table Candidate Prognostic factors, we present the different Candidate prognostic factors, measurement, the range of the scales, and how we will handle variables in our statistical analysis.

Reviewer 2

Thanks for the opportunity to review this protocol. As the data collection is almost finished, I have focused on the reporting of the protocol rather than the design. Generally, I find it clearly reported and the study well thought through.

A few comments for the author to consider.

Comment 1: The study is described as PROGRESS Type 3, consider adding that it is a type 1b according to TRIPOD.

Thank you for this relevant suggestion. We now add that we performing a type 1b study according to TRIPOD.

(page 6, lines 98-102) The present study is a prospective cohort study of prognostic factors informed by the PROGRESS framework and TRIPOD statement type 1b and specific recommendations for statistical approaches to Type 3 prognostic model research (27,28).

Comment 2: Candidate prognostic factors: As you are clearly aware, most developed prediction models end out being of little value, because they do not perform well outside of the development sample. Knowing that, I am not sure why you did not use an existing model as starting point and then updated with new predictors if relevant. Please consider addressing that in the introduction or discussion.

We selected several candidate prognostic factors presented in previously published prognostic models. We found the following candidate prognostic factors in our systematic review: higher age, concomitant LBP of headache, and a previous episode of neck pain. Although the quality of the developed models was low, the studies were graded as low to very low and were thereby not applicable as a specific starting point.

We do describe that we included several prognostic factors found in our systematic review in our method section under candidate prognostic factors and in our discussion. As this may not have been very clear in our manuscript, we make this more specific in the revised manuscript:

(page 9, lines 170-172) “The candidate prognostic factors are based on our previous systematic review and Delphi study. From the systematic review, we included the variables significantly predictive of pain chronification or non-recovery. Furthermore, we included the variable with a consensus of >70% in the first round of our Delphi study.”

(page 20, lines 340-346) “The candidate prognostic factors in this study are mostly modifiable. The non-modifiable factors of increasing age, sex, duration of neck pain and reported pain in different body regions have a known prognostic value for neck pain patients(10,15,23,67). Therefore these will be included in the model development to strengthen the value of our prognostic model.”

Moreover, we agree that our considerations are not very well introduced. We do now in our introduction:

(page 4, lines 71-74) At the present time the existing literature on prognostic models shows a low performance in predicting chronicity or recovery from neck pain(15,16). It is therefore not applicable as a starting point for a new prognostic study. A limitation and possible explanation of this low performance is the inclusion of a too-heterogeneous group of neck pain patients.

(page 5, lines 82-83) Only clinically modifiable factors have the potential to change patient outcome and are therefore recommended to be included in prognostic research(16,24). However, to strengthen a prognostic model, it can be relevant to include some non-modifiable factors. Based on a recent consensus study of potential modifiable prognostic factors, including psychosocial factors in prognostic research for chronification is relevant(25).

Comment 3: For some of the factors listed in Table 1, which are not presented as “unvalidated”, there is no reference provided to the validation of the measure. Please make sure that you either provide supporting information or state it is an unvalidated measure.

Unfortunately, there were no suitable validated measurements for some of our candidate prognostic factors (work-related factors, therapeutic relations, and physiotherapists' attitudes). We describe this in our detailed description of the measurements. However, we agree that more attention must be given to the fact that we measure some factors with unvalidated questions or measurements in Table 1.

We now do that by adding an asterisk to these factors and adding text underneath the Table:

(page 12, line 177) *Candidate prognostic factors measured by an unvalidated measurement.

Comment 4: You argue for the use of age, gender, and symptom duration in addition to potentially modifiable factors. I agree with that decision but think the same argument would apply to for instance socioeconomic factors. Consider addressing why you see these differently than age, gender, and duration. I follow your argument why it is most helpful to identify modifiable factors, but if unmodifiable are strong determinants of outcome that is important for informing management strategies as well.

Thank you for this suggestion. The candidate non-modifiable prognostic factors, age, gender, and symptom durations, all showed promising prognostic capacity in previous studies. Socioeconomic factors, such as social class, marital status, children, level of education, and employment status, were also included in previous studies as potential prognostic factors for pain or perceived non-recovery. Although some of these factors were positively associated with higher pain intensity or perceived non-recovery in the univariate analyses after 6 or 12 months, only employment status remained in one multivariable prognostic model. (Verwoerd, 2019)

However, the impact of different socioeconomic factors on the prevalence, prognosis, and transition of pain is shown in several studies (Larsson B. et al., 2012, Jackson et al., 2015, Palmlöf L et al., 2012). Therefore, we do understand this critical point and concerns. However, we had to make choices in the candidate prognostic factors that we could include in this cohort study concerning the number of possible sample sizes to be achieved. Since too many candidate predictor factors towards a sample size is associated with overfitting. Therefore, we did not include these factors as candidate prognostic factors.

We included variables (1) work status and (2) education level in our patients’ questionnaire. See also our response to comment 6. We use these variables to describe the characteristics of our population, so professionals can decide whether our model can be used within their population.

Comment 5: Outcome: Please report the wording of the pain intensity measure (current pain, average pain last x weeks, or??) Note that you have used NPRS for ”Numeric pain rating scale” and for “Neck pain rating scale”.

We asked the patients to rate their current pain. Our exact question in our questionnaire is: “on a scale of 0 to 10, how much pain do you experience? 0 is no pain at all and 10 is the most imaginable pain.”

We added this specific question to table 1.

Furthermore, in our description of the candidate prognostic factors under symptoms, the symptoms are current pain intensity. (page 13, line 179)

We changed “Neck pain rating scale” in the “Numeric Pain Rating Scale”. Thank you for making us aware of this.

Comment 6: Analysis plan: The description of how you will determine if missing data is missing at random is not really clear to me. Consider if it needs rewording.

It is not clear why you perform the univariable analyses. I think it is fine to present these to inform readers about their relationship with the outcome. Perhaps state directly that univariable analyses are not used to decide which prognostic factors will go into the multivariable model.

Thank you for these comments. We need to describe that we will not use the univariable analyses to decide which prognostic factors will be included in our multivariable analyses. In addition, it may have needed to be clarified why we are performing the univariate analysis. We do this now in our method section, under our statistical analysis methods and missing data (page 18; lines 310-315):

Identifying the independent predictive capacity of the candidate prognostic variables at baseline and the existence or non-existence of chronic pain measured at six weeks, three, and six months by univariable logistic regression analysis. These analyses will not be used to decide which prognostic factors will be included in the multivariable analyses;

Regarding the missing data, we now write (page 18; lines 302-309):

- Analysis of cases with and without the development of the outcome events (whether or not they developed chronic pain, respectively) will be done to determine if there are significant differences. In case > 5% of incomplete records, data will be imputed. A multiple imputation strategy will be followed in case we assume data are at least missing at random. The number of imputations will be set to the percentage of incomplete records. Imputed values for continuous variables will be drawn using predictive mean matching. In case of evidence of data being MAR (or MCAR), the MAR assumption will be assessed by making a missingness indicator and testing whether incomplete patients differ from those that are incomplete.

Comment 7: I am not a fan of considering the inclusion of age and gender an “adjusted” prediction model. I think that tends to mix concepts between prediction and causation. In prediction models, all included variables potentially contribute to predictive performance. You may consider investigating if modifiable predictors interact with age or gender if the sample size allows for that.

We agree that including age and gender as an adjusted factor does not seem right. It is also not sufficiently consistent with our statement that we use these factors as strengthening factors for our model development (page 20, line 340-343):

The non-modifiable factors of increasing age, sex, duration of neck pain and reported pain in different body regions have a known prognostic value for neck pain patients(10,15,23,67), therefore these will be included in the model development to strengthen the value of our prognostic model.

Moreover, in our revised version of our manuscript, we write now in our introduction (page 5, lines 82-83):

However, to strengthen a prognostic model, it can be relevant to include some non-modifiable factors.

We now write in our ‘Statistical analysis methods and missing data’ section (page 18, lines 319-320):

- The non-variable factors of age, gender, and duration of the pain will be included to strengthen the performance of our model. The discriminative ability of the prognostic model will be determined based on the Area Under the receiver operating characteristic Curve (AUC), calibration will be assessed using a calibration plot and formally tested using the Hosmer and Lemeshow goodness-of-fit test, and model fit will be quantified as Nagelkerke’s R2;

Comment 8: Your plan for model reduction is somewhat hidden under internal validation. It would be useful to briefly describe how shrinkage will be used to remove potential predictors. How close to zero should the coefficient by after shrinkage for the factor to be removed from the model?

Thank you for this comment. By shrinking coefficients (slightly) towards 0, the effect of overfitting is counteracted. The internal validation step will not be used to select predictors for the prediction model, as e.g., the Lasso would do. Contrary to parameterwise shrinkage methods, the bootstrap yields a global shrinkage factor that is applied to all regression coefficients.

See our changes at page 19, lines 324-328:

- Internal validation will be performed using bootstrap resampling to estimate the optimism-corrected AUC and to yield a measure of overfitting (i.e., the shrinkage factor).

The shrinkage factor (a constant between 0 and 1) will be used to multiply the regression coefficient by. Generally, regression coefficients (and resulting predictions) are too extreme in case of overfitting, which is counteracted by the shrinking of regression coefficients.

Comment 9: I recommend that you report how you plan to compare the performance to existing prediction models, including which models you will compare to. How will you determine if it is worthwhile moving on to external validation?

Thank you for raising these critical points. Our systematic review showed that the previously developed models for this specific group of patients are based on studies with a high risk of bias and without good predictive performance. So, comparing a newly developed model with these previously developed models is not valid. In addition, we also focus on other variables, in particular modifiable factors, compared to the previously developed models.

Concerning pre-determining whether external validation is relevant, this cannot be determined in advance. A small discriminative ability may be relevant in a population with a high incidence of (chronic)neck pain and may thereby be socially relevant. In addition, if we find evidence that some of the included modifiable factors have a high predictive power, it will be relevant to clinical practice; since a physiotherapist might modify these factors. We would like to refrain from including this dilemma in our protocol, but will undoubtedly include this in the discussion of our results manuscript.

Reviewer 3

A study protocol for the validation of a prognostic model with an emphasis on modifiable factors to predict chronic pain after a new episode of acute- or subacute nonspecific idiopathic, non-traumatic neck pain presenting in primary care.

I highly commend the authors for their high quality work and the potential prospect impact on health care and clinical decision making in the care of neck pain and prediction of potential factors that may lead to chronicity, indeed this is a great valuable research efforts. However, the following is my humble criticism

Comment 1: Objectives You wrote; “The primary objective of this study is to identify which modifiable and non-modifiable factors are independent predictors of the development of chronic pain in patients with acute- or subacute nonspecific idiopathic, non-traumatic neck pain, and secondly, to combine these to develop and internally validate a prognostic prediction model”. *With regards to the objectives I fully I agree with the authors . Their objectives are legitimate and rational , and these kind of studies is needed to improve the clinical work of physiotherapist.

However, I should point out that because there is a synchronized positive relationship between pain, and fear related illness behaviors in acute sage most of the psychological factors cannot be modifiable at acute stage because it is natural response to pain. However, this relationship may vanish or persist in most people following subacute stage and may be reinforced in others due to selected environmental biopsychosocial factors as you indicated. The role of the psychological factors mainly fear of/ anticipation of pain and catastrophizing continue to develop and reinforce the pain and related behavior beyond the subacute stage, so the argument that may arise her is whether the emphasis should be directed to screen for the most frequent reinforcers found in the chronic stage and then to be used later in acute or subacute stage as prognosis predictors so that the therapist screen to identify and modify.

Thank you for this comment. We agree that some of our included factors can be a natural response to pain, especially kinesiophobia and catastrophizing. A low level of kinesiophobia or catastrophizing can be a healthy and beneficial response to pain, giving the body some time and rest to recover. However, the level of some factors, for instance, kinesiophobia and catastrophizing, differ between patients. It is known that an excessively negative orientation toward pain (pain catastrophizing and fear of movement (kinesiophobia) is essential in the etiology of chronic low back pain (Picavet et al, 2002). That is also why we decided to handle the level of kinesiophobia and catastrophizing as continuous factors in our analyses; a specific cut-off point is not known in when it is a healthy or an excessive response that can be associated with or is prognostic for chronicity.

Concerning the potential limited possibility to modify psychological factors in a (sub)acute phase; data suggest that behavioral interventions are associated with concurrent changed in catastrophizing and pain intensity in acute and chronic pain states (George SZ et al., 2008; Phillip J Quartana et al., 2009). Nevertheless, it is difficult to determine whether the stronger magnitude of the relationship for state versus trait pain catastrophizing is not attributable in large part to confounding with the pain experience itself (Phillip J Quartana et al., 2009). However, since we develop a prognostic model for a physical therapist in the acute stage, measuring these psychologic factors in the (sub)acute phase of neck pain is the only option.

Thanks to your critical comment, and since we explicitly considered this, we have clarified this in our revised manuscript (page 14, lines 217-221):

In a (sub)acute state of pain, a response such as fear of movement or negative orientation toward pain could exist. However, it is not known when this response is a beneficial level of adaptation or an excessive response to (sub)acute pain. Furthermore, whether it is associated with developing chronicity in neck pain, a specific cut-off point to differentiate between these two levels does not exist. Therefore, our analyses will address catastrophizing and kinesiophobia as continuous factors.

Comment 2: Study Settings. You have large Number of physiotherapist included in the study this may have advantage or disadvantage specifically, related to these individual knowledge and understanding of the biopsychological factors, and skills in screening, or treatment implementation of these knowledge in their workplace this may need to elaborated on dont you agree .

We agree that there will be a difference in understanding of the biopsychological factors and skills in screening between our included physiotherapists. However, this fact does not directly influence our study because screening the candidate (psychological)prognostic factors will be done with patient-reported questionnaires.

There will also be a difference in the treatment of our included patients. We cover that by including the attitude of the physiotherapists as a candidate prognostic factor.

Suppose our prognostic model will be sufficient and physiotherapists’ attitudes are one of the prognostic factors, next we could try to change these attitudes in practice. In addition, that may also change practice behavior (e.g., biopsychosocial skills) (Verwoerd, 2021).

Comment 3: Participant. “The patients are at least 18 years or older”

Neck pain is common among adults, although it can occur at any age. Are you awear of the Global Burden of Diseases 2017 study, it demonstrated that the point prevalence of neck pain peaked during the middle ages with the highest burdens in people age 45–49 and 50–54 for men and women, respectively. Kazeminasab, S., Nejadghaderi, S.A., Amiri, P. et al. Neck pain: global epidemiology, trends and risk factors. BMC Musculoskelet Disord 23, 26 (2022). https://doi.org/10.1186/s12891-021-04957-4

Therefore, including young participant starting from age 18 years may not reflect the day today patient volume in any physical therapy clinical setting. In addition, young individuals are motivated, highly active and may have different biopsychosocial factors than the adults or senior individual. You may need to reflect on the young age pain behavior psychology if you have a huge number of young individuals or eliminate young individuals as a sub population in your study.

We are aware of the highest burdens of neck pain in different age groups for men and women. However, these numbers are not based on the visiting patients at physiotherapy primary care or patients with non-specific acute- or subacute neck pain. There is no description of these age groups' neck pain; it can be mainly chronic or specific neck pain. Therefore, we will not only include or make subgroups of patients in a particular age group beforehand. Please note that all consecutive patients will be included; hence, we expect to include a very broad range of ages in our study. Moreover, age has been selected as a candidate prognostic factor and may be included if shown to be an important predictor of the outcome.

In addition, the model we will develop will be made for primary care and therefore has to be generalizable to that setting. That is why we must include the entire group with acute and subacute complaints that enter primary care in the Netherlands. This will make the model applicable and clinically relevant in primary care. However, it is an interesting point. We will measure the central tendency in our descriptive statistics. Based on these findings, we can compare the incidence of our patients with neck pain and the one in the global burden of diseases study.

Nevertheless, if age and related factors (high activity, biopsychosocial factors, etc.) significantly impact prognosis, we will find that in our univariate and multivariate analyses.

Comment 4: “If the patient has had neck pain before, the patients must be relatively free from symptoms for at least three months”

My question to you is how would you assume that this patient has no learning effect from his previous episodes pain related fear experience and behavior , I though you needed an individuals with totally knew pain experience to be able to demonstrate a good predicting tool.

We are aware that some patients may have “learned” from their previous pain episodes. However, this was a pragmatic choice as large sample size is needed to develop prognostic models, and we foresaw difficulty collecting “fresh” subjects. We ask the included patients if they had a previous pain episode, and we will present that in the characteristics of our population. We will report on this in the discussion of the results paper as a potential limitation of our study.

Comment 5: I have reviewed the Delphi survey and your systematic survey I think I perceived that unhealthy life style and physical inactivity were considered separate variables, I also did not find any mentioned to somatization in your factors, this was mentioned earlier by the Delphi survey could you define it and further elaborate why it was not included.

Thank you for looking critically at the various studies we conducted prior to this cohort study and the choices we made based on these studies.

In our Delphi study, physical inactivity emerges as a separate variable. However, physical inactivity is one of the domains of a lifestyle. Therefore, we have placed several variables under lifestyle; alcohol use, smoking, BMI, and physical inactivity. We should have made that clear in Table 1. We have adjusted this, so it is clear that these are all different candidate prognostic factors included in our analysis (see Table 1, page 12).

You are right about the variable somatization. Based on our statement that we would include all variables above >70% consensus in our cohort study, this should be included. However, we had to make choices in the number of variables we could include in our study. Achieving a sample size large enough for the number of variables in such a specific group of patients is difficult within the time we have. We included the variables that scored above >70% in the first round of the Delphi. We did this because the degree of bias in the second round of our Delphi study may be high. We have also described this in the discussion of our Delphi study.

We need to describe this clearly in our protocol. We now do this in our method section under 'Candidate prognostic factors' (page 9, line 170-172):

From the systematic review, we included the variables significantly predictive of pain chronification. Furthermore, we included the variable with a consensus of >70% in the first round of our Delphi study.

However, the fact that somatization does emerge as a prognostic or risk factor in various studies could be a reason to include it (Farideh Sadeghian et al., 2012; C K Jørgensen et al. 2000; Mehling WE et al. 2015; Markus Melloh et al. 2013). We will certainly include this possibly not ideal choice in the discussion section of our result manuscript.

Comment 6: Her is another confusing problem for the prognostic tool you are about to produce and please allow me to elaborate and explain my worries and its all centered around Kinesiophobia. Kinesiophobia defined as “an excessive, irrational, and debilitating fear of physical movement and activity resulting from a feeling of vulnerability due to painful injury or reinjury”. It is by itself a central factor in the process of pain developing from acute to chronic stages, The Cognitive Fear Avoidance Model describes that very clearly, it also linked it strongly to catastrophizing, re/injury, avoidance behaviour, and on the long run inactivity, disability, depression, low self-esteem and increasing the risk for a wide range of health problems, functional decline and premature death.

My question is: You have included so many independent factors that have high potential prognostic ability alone, so it become very difficult and confusing to understand the weighting of theses variables to the final prediction scores on your prognostic tool while in reality each one of which is so representative and highly weighted predictor itself such as kinesiophobia , depression, anxiety, low self-esteem. Need to elaborate a bit more on this.

If we understand this question correctly, a part of this question is answered under your comment 1.’

In addition, we also include the potential multi-collinearity between different psychological constructs in our statistical analysis. We have now also described this in our statistical analysis section (page 18, lines 316-318):

Multicollinearity between candidate predictors will be assessed using the variance inflation factor. In case the variance inflation factor exceeds 10, we will select which candidate predictor add to the modeling phase based on clinical expertise.

Thank you for this relevant point about the concrete weighting of the different psychological factors in our prognostic tool. We will certainly include this comment and critically reflect on our outcomes in our future result paper.

Comment 7: Discussion

Line 338-350 I found the following statement very confusing and not helpful to justify the objectives of the study:

- 338. The given therapy may influence the outcome and the accuracy and transportability of the model to be developed.

- 340. The patients receive standard care based on the Dutch Physiotherapy Guideline for neck pain.

- 344-345. We will have no information on this form of treatment during this study; however, it could influence the outcome.

You wrote “Nevertheless, we consider the impact on our study findings to be minimal, given ……..”

In their conclusion Carroll LJ, Hogg-Johnson S, van der Velde G, Haldeman S, Holm LW, Carragee EJ, Hurwitz EL, Côté P, Nordin M, Peloso PM, Guzman J, Cassidy JD. Course and Prognostic Factors for Neck Pain in the General Population: Results of the Bone and Joint Decade 2000 –2010 Task Force on Neck Pain and Its Associated Disorders. Eur Spine J. 2008 Apr;17(Suppl 1):75–82. doi: 10.1007/s00586-008-0627-8. Epub 2008 Feb 29. PMCID: PMC2271093. “General exercise was not prognostic of better outcome; however, several psychosocial factors were prognostic of outcome”.

In their discussion they also have specifically stated that “ Prognosis may also depend on whether or not the exercises themselves were designed to impact the neck and shoulder areas”.

My question since the author of the above study concluded only on general exercises, but have raised the potential value of specific designed exercise then this raise the concerns about the type of approach used in these multicenter and by the physiotherapist skills and preferences involved in this study.

The benefit and impact of specific approaches as the directed self treatment exercise for the neck used by well trained therapist such as Maitland, McKenzie, or Shacklock M neurodynamic and others on the outcomes has ben well documented such techniques has prognostic value against psychological factors and chronicity.

For example directional preference exercise by the McKenzie approach help the patient face his one fear of painful movement direction while rehearsing in this direction which help centralized improve and prevent the next episodes of pain and fast return to work.

Line 348-350

You wrote

“Thereby, we will report the physiotherapy treatment the patient received and discuss the possible impact on our study findings (TRIPOD 5C) but do not include the different treatments as a predictor in our model” .

I think you may need to reconsider these statement in light of the variation of approaches among theses centers to reveal the impact of these specific neck exercise approach on modifying the psychological factors

Although we agree with your statement here, this would require a different study design to assess the influence of various PT approaches on psychological variables.

As described earlier in comment 5, achieving a reliable sample size in a controlled manner is challenging in such a specific research group. We had to make choices based on that. Unfortunately, we were unable to includer the various treatments applied. In addition, if our study is very homogeneous, we will get that back in our external validation. Therefore, we have described in our discussion that we are aware that this may modify the modifiable factors included. However, we give reasons why this effect on our results may also be limited in our discussion section (page 21, lines 368-376):

We will have no information on this form of treatment during this study; however, it could influence the outcome. Nevertheless, we consider the impact on our study findings to be minimal, given (1) the heterogeneity of the factors to be modified, (2) the multiple modalities used by physiotherapists, and (3) the difference in physiotherapists’ backgrounds. Thereby, we will report the physiotherapy treatment the patient received and discuss the possible impact on our study findings (TRIPOD 5C) but do not include the different treatments as a predictor in our model. Moreover, the current setting does reflect clinical practice as it is. This heterogeneity is likely to remain even after implementing of a well-performing model.

We included the physical therapist's variable attitude as a candidate prognostic factor. This will partly obviate that the biopsychosocial therapist may pay more attention to psychosocial factors, and the 'biomedical' therapist pays more attention, for example, to the manual therapeutic techniques you have mentioned.

Reviewer 4

I would like to thank the authors for their time and efforts in drafting this protocol study entitled, “A study protocol for the validation of a prognostic model with an emphasis on modifiable factors to predict chronic pain after a new episode of acute- or subacute nonspecific idiopathic, non-traumatic neck pain presenting in primary care”. I found it to be of interest and very well written.

Comment 1: However, the authors may consider clarifying if the participants in their study will be asked to report pain intensity “in the last 24 hours” or “an average pain intensity” because recall of pain may vary.

Thank you for this comment. See our reaction to comment 5 of reviewer 2.

Comment 2: I strongly suggest that the authors include the operational definitions for acute and subacute neck pain knowing that determining whether a patient fits into the acute or subacute time-period is not always as precise as we would like to think.

We are aware of the wide variance in categorizing acute and sub-acute neck pain. In the literature, we found categorization between <1 week to < 6 weeks for acute neck pain. Most studies comparing the outcomes between the subgroups (acute vs. subacute) handle this variable as a dichotomous variable. In our opinion, there is no hard cut-off point in the duration of the pain and the different outcomes of treatment or prognosis; that is why we handle the duration of neck pain as a continuous variable in our statistical analysis.

We also add that in our manuscript under the description of the measurement ‘symptoms’:

(page 13, lines 181-182) Duration of pain will be handled as a continuous variable in our statistical analysis since there is no hard cut-off point between ‘acute’ and ‘sub-acute’ pain.

However, we use the terms' acute' and 'sub-acute' in our study descriptions, so a more precise description of our categorization is recommended. In our introduction and participants' descriptions, we clarify this is as follows:

(page 5, lines 87-90) Therefore, there is a need for a prognostic study that identifies modifiable prognostic factors using a biopsychosocial view, that includes only patients with acute- (0 to 3 weeks) or subacute (4 to 12 weeks) nonspecific idiopathic, non-traumatic neck pain, to help prevent chronification of pain in physiotherapy practices.

(page 7, lines 119-120) The patients will be approached if they present with a new episode of acute- (0 to 3 weeks) or subacute (4 to 12 weeks) nonspecific idiopathic, non-traumatic neck pain.

Comment 3: In addition, I recommend including the participants’ number of previous episodes of neck pain as a factor in the analysis because number of previous episodes is associated with subsequent outcome in musculoskeletal pain symptom.

Thank you for this suggestion. In our questionnaire, we asked the patients when they experienced the last episode of neck pain. However, patients indicate that they do not know precisely when the last episode was. Besides, it is known that it is challenging to recall both the pain variation and intensity dimensions of neck pain (Irgens et al., 2022). Indicating the number of previous episodes of neck pain by the patients will be even more difficult for patients with more than one episode and is thereby also not a reliable factor for our analysis.

Comment 4: Although the time-period “0–4 weeks of symptoms” is well-known definition of “acute” neck pain, during analysis, I suggest (if applicable) exploring the relationship between participants prognostic factors at baseline and outcome for a subgroup of patients with acute neck pain with shorter period (0–2 weeks) “high-acute” and (2-4) “mid-acute” of symptoms.

Thank you for this comment. See our reaction on ‘comment 2’.

Comment 5: Lastly, one formatting note: I believe the full stop should be placed after the in-text citation.

Thank you for making us aware of this. Since we are using the Vancouver referencing style, the full stop should be placed after the in-text citation. We changed this in our manuscript.

________________________________________

Attachment

Submitted filename: Response to Reviewers.docx

Decision Letter 1

Aqeel M Alenazi

26 Dec 2022

A study protocol for the validation of a prognostic model with an emphasis on modifiable factors to predict chronic pain after a new episode of acute- or subacute nonspecific idiopathic, non-traumatic neck pain presenting in primary care.

PONE-D-22-19562R1

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Additional Editor Comments (optional):

Thank you for addressing the comments and suggestions. Now the paper is accepted.

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Does the manuscript provide a valid rationale for the proposed study, with clearly identified and justified research questions?

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Reviewer #2: Yes

Reviewer #3: Yes

Reviewer #4: Yes

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2. Is the protocol technically sound and planned in a manner that will lead to a meaningful outcome and allow testing the stated hypotheses?

The manuscript should describe the methods in sufficient detail to prevent undisclosed flexibility in the experimental procedure or analysis pipeline, including sufficient outcome-neutral conditions (e.g. necessary controls, absence of floor or ceiling effects) to test the proposed hypotheses and a statistical power analysis where applicable. As there may be aspects of the methodology and analysis which can only be refined once the work is undertaken, authors should outline potential assumptions and explicitly describe what aspects of the proposed analyses, if any, are exploratory.

Reviewer #2: Yes

Reviewer #3: Yes

Reviewer #4: Yes

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Descriptions of methods and materials in the protocol should be reported in sufficient detail for another researcher to reproduce all experiments and analyses. The protocol should describe the appropriate controls, sample size calculations, and replication needed to ensure that the data are robust and reproducible.

Reviewer #2: Yes

Reviewer #3: Yes

Reviewer #4: Yes

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Reviewer #2: No

Reviewer #3: Yes

Reviewer #4: No

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Reviewer #3: Yes

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Please use the space provided to explain your answers to the questions above and, if applicable, provide comments about issues authors must address before this protocol can be accepted for publication. You may also include additional comments for the author, including concerns about research or publication ethics.

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Reviewer #2: Thanks for addressing my comments. I hope you found the reviews helpful and wish you good luck with conducting the study.

Reviewer #3: I thank you the authors for their responses to my criticism and I found that all their responses to be rational and valid

Reviewer #4: A comprehensive study and will provide valuable data for the prognosis of chronic pain among patients with acute and subacute neck pain.

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Reviewer #3: Yes: professor Saud M. Al-Obaidi Ph.D PT

Reviewer #4: No

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Acceptance letter

Aqeel M Alenazi

3 Jan 2023

PONE-D-22-19562R1

A study protocol for the validation of a prognostic model with an emphasis on modifiable factors to predict chronic pain after a new episode of acute- or subacute nonspecific idiopathic, non-traumatic neck pain presenting in primary care.

Dear Dr. Verwoerd:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

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on behalf of

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