Skip to main content
PLOS One logoLink to PLOS One
. 2023 Jan 19;18(1):e0280437. doi: 10.1371/journal.pone.0280437

Human papillomavirus genotype distribution among women with and without cervical cancer: Implication for vaccination and screening in Ghana

Yvonne Nartey 1,*,#, Kwabena Amo-Antwi 2,#, Philip C Hill 3, Edward T Dassah 2, Richard H Asmah 4, Kofi M Nyarko 5, Ramatu Agambire 6, Thomas O Konney 2, Joel Yarney 7, Nelson Damale 8, Brian Cox 9
Editor: Gulzhanat Aimagambetova10
PMCID: PMC9851533  PMID: 36656844

Abstract

Introduction

Determining the high-risk human papillomavirus (HR-HPV) genotypes burden in women with and without cervical cancer afford a direct comparison of their relative distributions. This quest is fundamental to implementing a future population-based cervical cancer prevention strategy in Ghana. We estimated the cervical cancer risk by HPV genotypes, and the HPV vaccine-preventable proportion of cervical cancer diagnosed in Ghana.

Materials and methods

An unmatched case-control study was conducted at the two largest cervical cancer treatment centres in Ghana from 1st October 2014 to 31st May 2015. Cases were women diagnosed with cervical cancer and controls were women without cervical cancer who were seeking care at the two hospitals. Nested multiplex polymerase chain reaction (NM-PCR) was used to detect HPV infection in cervical samples. Logistic regression was used to determine the association between the risk of cervical cancer and identified HPV infection. P ≤0.05 was considered statistically significant.

Results

HPV deoxyribonucleic acid (DNA) data were analysed for 177 women with cervical cancer (cases) and 201 without cancer (controls). Cervical cancer was diagnosed at older ages compared to the age at which controls were recruited (median ages, 57 years vs 34 years; p < 0.001). Most women with cervical cancer were more likely to be single with no formal education, unemployed and less likely to live in metropolitan areas compared to women without cervical cancer (all p-value <0.001). HPV DNA was detected in more women with cervical cancer compared to those without cervical cancer (84.8% vs 45.8%). HR-HPV genotypes 16, 18, 45, 35 and 52 were the most common among women with cervical cancer, while 66, 52, 35, 43 and 31 were frequently detected in those without cancer. HPV 66 and 35 were the most dominant non-vaccine genotypes; HPV 66 was more prevalent among women with cervical cancer and HPV 35 in those without cervical cancer. Cervical cancer risk was associated with a positive HPV test (Adjusted OR (AOR): 5.78; 95% CI: 2.92–11.42), infection with any of the HR-HPV genotypes (AOR: 5.56; 95% CI: 3.27–13.16) or multiple HPV infections (AOR: 9.57 95% CI 4.06–22.56).

Conclusion

Women with cervical cancer in Ghana have HPV infection with multiple genotypes, including some non-vaccine genotypes, with an estimated cervical cancer risk of about six- to ten-fold in the presence of a positive HPV test. HPV DNA tests and multivalent vaccine targeted at HPV 16, 18, 45 and 35 genotypes will be essential in Ghana’s cervical cancer control programme. Large population-based studies are required in countries where cervical cancer is most prevalent to determine non-vaccine HPV genotypes which should be considered for the next-generation HPV vaccines.

Introduction

Cervical cancer is the second common female cancer in Ghana [1]. However, like most low- and middle-income countries (LMICs) access to and uptake of cervical cancer screening and human papillomavirus vaccination are limited in Ghana. Additionally, delayed diagnosis leads to poorer oncologic outcomes, which disproportionately impedes cervical cancer control in Ghana [2, 3]. The recognition that persistent HR-HPV infection causes cervical cancer [4] has engendered a global strategy for cervical cancer prevention in the twenty-first century [5]. The detection of the HPV DNA has become an attractive approach to identifying women at risk of developing cervical cancer. The aetiologic role of HPV of the alpha genus is well documented in several epidemiological studies [6]. The alpha HPVs are classified based on phylogenetic similarity, and their association with cervical intraepithelial lesions and carcinoma [7]. The genotypes 16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66 and 68, are designated high-risk or carcinogenic to humans. Other genotypes, including 26, 53, 69, 73 and 82, have been suggested as probable high-risk group. The low-risk HPV, HPV-42, -43, -6/11 and -44 [8], cause benign hyperproliferative epithelial lesions [9]. In regions of established cervical cancer programs, HPV vaccination given prior to wide HPV exposure prevents about 90% of targeted HPV-related infections, cervical precancer lesions and cancer [10, 11].

In the last 20 years, major efforts have been made worldwide to generate epidemiological data on cervical HPV-DNA. HPV prevalence and genotype distribution are discrepant, mainly caused by several factors, including early sexual debut, risky sexual habits and lack of systematic vaccination and screening programmes [12]. In West Africa (including Ghana), while infections with genotypes 16, 58, 18, 35 and 52 are common in women with normal cytology, types 16, 18, 45, 59 and 35 are most prevalent in women with cervical cancer [13]. Apart from the infection with types 16 and 18, significant variation exists in the distribution of the other HR-HPV genotypes (31, 33, 35, 45, 52, and 58) which contributes up to 30% of the cause of invasive cervical cancer worldwide. Of the risk factors, multiple HPV infections and co-infection with HIV are associated with the highest risk of invasive cervical cancer [14]. The prevalence of HPV DNA positivity has individual and community level significance regarding cervical cancer control. The HPV infection profile in different geographical areas has implications for region-specific HPV DNA testing, vaccine choice, and expected efficacies.

The available HPV vaccines have activity against up to nine HPV types (6, 11, 16,18, 31 33 45 52 58) [15]. The bivalent vaccines and later the quadrivalent vaccine, were introduced in Ghana in the last decade, and from 2013 to 2015, Global Alliance for Vaccines and Immunization (GAVI) supported an HPV demonstration project among 10–14-year-old girls in four regions [16]. The geographic HPV genotype variability has increased the debate about HPV vaccine efficacy in the sub-Saharan [17]. The licensed vaccines were developed based on the virus-like particle of the major papillomavirus protein L1, which is highly genotype-specific [18]. Expectedly, limitations exist in vaccine efficacies against non-vaccine alpha HPV type and the level of cross-protection afforded by these vaccines. More recently, cytologic tests have been replaced by polymerase chain reaction (PCR)-based assays for the presence of HR-HPV in a number of high-income countries [19].

Cervical cancer prevention through vaccination against HPV and early detection and treatment of cervical cancer is critical in the WHO strategy for the disease elimination [20]. The female population in Ghana may be exposed to different levels of risk and time to cervical cancer progressions. Determining HR-HPV genotype distribution in women with or without cervical cancer afford a direct comparison of their relative burden and an estimate of the likely progression into invasive cervical cancer. This quest is fundamental to implementing a population-based cervical cancer preventive strategy in Ghana. We estimated the cervical cancer risk by HPV genotype and the HPV vaccine-preventable proportion of cervical cancer in women seen at Ghana’s two largest cancer treatment centres.

Material and methods

Study design

A case-control study was conducted from October 2014 to May 2015 among women seeking care at Ghana’s two largest tertiary hospitals.

Setting

In the absence of a population-based cervical cancer preventive strategy, several health facilities, including Korle Bu Teaching Hospital (KBTH), Accra and Komfo Anokye Teaching Hospital (KATH), Kumasi, provide opportunist screening for cervical cancer in Ghana. Albeit cervical cancer screening in Ghana is limited, government and non-governmental institutions have actively undertaken projects on cervical cancer. Opportunistic screening for cervical cancer at the two tertiary hospitals started in May 2004 through a John Hopkins Programme for International Education in Obstetrics and Gynecology (JHPIEGO) initiative supported by the Ghana Government and Ministry of Health (MOH). They account for the most significant number of women screened per institution and remain relevant in decisions regarding cervical cancer control in Ghana. The Departments of Obstetrics and Gynaecology and Radiation Oncology of these hospitals provide services for up to 600 women with cervical cancers annually [2].

Recruitment of study participants

Women with or without cervical cancer aged at least 18 years who resided in Ghana for at least three years prior to the study were eligible for inclusion. Cases were women diagnosed with cervical cancer seeking treatment at the two hospitals within the study period. Within the same period, women who did not have cervical cancer but visited the Obstetrics and Gynaecology departments of the two hospitals for other reasons were recruited as controls. Pregnant women or those previously treated for cervical cancer were excluded. Women on hormonal contraceptive methods were excluded from the controls. Cases were recruited consecutively until the desired sample size was attained. For every case recruited, the next eligible control was contacted for inclusion into the study. The cases and controls were recruited by two nurses working at the Radiation and Gynaecologic Oncology clinics at the two tertiary hospitals.

Interviews and DNA sample collection

Two specialist gynaecologists and oncology nurses working at gynaecologic and radiation oncology clinics were trained to obtain informed consent, administer a structured questionnaire, and collect cervical samples. After providing informed consent, a questionnaire covering demographic characteristics, sexual behaviour, reproductive and contraceptive history, genital hygiene, and screening history was administered in English or vernacular (mainly Ga or Twi). The interview and cervical sampling for newly diagnosed cases or the controls were done on the same day, while arrangements were initiated to retrieve paraffin-embedded slides for cases with a histology-confirmed diagnosis.

Cervical sampling was done in the minor procedure theatre (with a capacity for examination under anaesthesia). Participants were examined in the lithotomy position on a gynaecologic table. Under a good light source, a sterile bivalve speculum without a lubricant was inserted into the vagina to visualize the cervix or the cervical tumour. For women with obvious cervical tumour, a cytobrush was gently dabbed at several points on the cervical tumour to ensure adequate exfoliated cervical cancer cells were sampled. The cells were recovered into a pre-labelled tube containing DNAgard solution (Biometrica, San Diego, USA) for DNA preservation at room temperature until DNA extraction.

A cervical punch biopsy was taken in suspected cervical cancer cases with reference to local protocols. As a precaution, a vaginal pack impregnated with silver nitrate or acetoacetic acid was prepared and ready to be applied in the event of provoked vaginal bleeding after a punch biopsy. Paraffin-embedded slides were requested from the reporting laboratories for women with a histology-confirmed cancer diagnosis. In the control subjects, exfoliated cells from the ectocervix and endocervix were obtained using spatula and cytobrush, respectively (Pap Pak® cytology kit, Medical Packaging Corporation, Camarillo, CA, USA), with adherence to manufacturer’s instructions. The samples were smeared uniformly on a pre-labelled slide, and immediately fixed with a mixture of 95% ethanol and 5% polyethylene glycol (carbowax) (BD-TriPath Imaging). The cells remaining on the spatula and the cytobrush were again by washing them into DNAgard solution (Biometrica, San Diego, USA). The biopsy specimens and slides, for the histologic and cytologic assessments, were sent to the pathology department of the respective institution. The Pap results for the control subjects were reported according to Bethesda nomenclature [21], and any precancer lesion was managed according to the World Health Organization (WHO) protocol [22]. The cervical samples in the DNAgard solution (Biometrica, San Diego, USA) and paraffin-embedded samples were analysed for the presence of HPV DNA at the Department of Medical Laboratory Sciences, Molecular Biology laboratory, School of Biomedical and Allied Health Sciences, University of Ghana, Korle-Bu, Accra.

HPV DNA purification, amplification, and detection

HPV DNA isolation was performed with a commercially available kit (Qiagen Ltd, Maryland, USA), following manufacturer’s instructions for the samples stored in the DNAgard solution (Biometrica, San Diego, USA).

For the paraffin-embedded samples, DNA was extracted as using a method described by Lagheden et al. [23] as follows; briefly; one hundred and eighty (180 μL) ATL buffer from a Qiagen DNA extraction kit (Qiagen Ltd, Maryland, USA) was added to the tube and high-heat treated in 120°C for 20 min to melt the paraffin. Within the 5 first minutes the tubes were mixed by tapping the tube to make sure that all of the paraffin was under the surface. After 20 min the samples were incubated at room temperature for 3 minutes, followed by a quick centrifugation. 20μL proteinase K was then added, briefly vortex and incubated in 65°C for 16 hr. The tubes were quickly centrifuged. A solution of 200μL buffer AL (Qiagen Ltd, Maryland, USA) was added and 400μL ethanol, per sample, was prepared. The mixture was added to a DNeasy Mini spin column (Qiagen Ltd, Maryland, USA) and centrifuged 1 min at 8000 rpm. The following steps are performed according to the manufacturer’s protocol except for the volume in the elution step that was changed to 25μL AE buffer (Qiagen Ltd, Maryland, USA).

HPV-DNA detection and identification of the genotypes were carried out by nested multiplex PCR (NMPCR) [23]. Primers for the identification of high-risk genotypes 16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, and 68 and low-risk genotypes 6/11, 42, 43, and 44 were used. The primers were used in four cocktails, each containing four to five different primer pairs. A single consensus forward primer (GP-E6-3F) and two consensus back primers (GP-E7-5B and GP-E7-6B) were used. The PCR reaction mix of 25μl contained 10X PCR buffer (Promega, USA), 2.5 mM MgCl2, 200μM of each of the four oligonucleotide triphosphates (dNTP) (Promega, USA), 15pmols of each E6/E7 consensus primers and 1.25 units of Taq polymerase enzyme (Promega, USA). Four microlitres (4μl) of DNA extracts was used as template for the amplification reactions for samples extracted from cervical cells and 2μl for DNA from paraffin embedded samples. The PCR was carried out using a PE Applied Biosystems 9700 thermal cycler.

The cycling parameters for the first round PCR with E63F/E75B/E76B consensus primers were as follows: 94°C for four minutes (initial denaturation), followed by 40 cycles of 94°C for one minute (denaturation), 40°C for two minutes (annealing), 72°C for two minutes (extension) and a single final elongation step of 72°C for 10 minutes. In the second round PCR, 1μl of first round PCR product, 15pmols of forward and reverse primers for genotyping were used. The other parameters that were used in the first round PCR mix were the same. The cycling parameters were as follows: 94°C for four minutes followed by 35 cycles of 94°C for 30 seconds, 56°C for 30 seconds, 72°C for 45 seconds and a single final elongation step of 72°C for four minutes [24]. Plasmid DNA for HPV 16 and 18 were used as a positive control and the negative control was nuclease free water in all experiments for quality control.

The amplification products were analysed by gel electrophoresis on 2% agarose gel and stained with 0.5μg/ml ethidium bromide. Ten microlitres of each sample was added to 2μl of orange G (5X) gel loading dye for the electrophoresis. A one hundred base pair DNA molecular weight marker (Sigma, MO, USA) was run alongside the PCR products. The gel was prepared and electrophoresed in 1X TAE buffer using a mini gel system at 100 volts for one hour and the gel photographed over a UV transilluminator [24].

Sample size

Overall HPV DNA positivity and multiple HPV infections are critical determinants of cervical cancer risk. HPV prevalence is highest among HIV seropositive women, 75% [25], and lowest, 32.3% [12], in women with rural residence. At a 95% confidence and 80% power, if the true odds ratios in the highest- and lowest-at-risk populations for cervical cancer were assumed to be 2.83 and 1.6 [26], respectively, a sample size of 140 is required to study the risk of cervical cancer in the exposed relative to the unexposed populations. The ratio of controls to cases was 1:1. Allowing 10% for contingency, inappropriate and nonresponses, our estimated sample size was 154 in each group.

Data analysis

Participants’ demographic and HPV infection profiles were summarised using tables, proportions, means and standard deviations, and medians with interquartile ranges (IQR). For the purpose of the analysis, fourteen HPV types (16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66 and 68) were considered high-risk oncogenic types [27]. Four HPV types (6/11, 42, 43 and 44) were considered low-risk oncogenic types (HPV types 6 and 11 were combined). Participants were classified as HPV DNA positive or negative according to whether HPV DNA was detected in cervical samples. The HPV infection detected was further characterised as a single or multiple HPV infections. HPV DNA prevalence was calculated as a percentage of women positive for any HPV type relative to the total number of women with a negative or positive HPV test. HPV DNA positivity was calculated separately for cases and controls, with their respective denominators. Detected HPV types were dichotomised into vaccine types and non-vaccine types to assess the potential efficacy of the approved HPV vaccines. Odd ratios (ORs) and 95% confidence interval (CI) for the association between risk of cervical cancer and HPV DNA positivity, risk group and infection type were estimated using logistic regression. All analysis was conducted in STATA® version 16.1 (STATA Corporation, College Station, TX). P≤0.05 was considered statistically significant.

Ethics

The study was approved by the Committee on Human Research, Publications and Ethics (CHRPE), Kwame Nkrumah University of Science and Technology and KATH (CHRPE/AP/661/19), the Ethics Committees of the University of Otago, New Zealand (Ref: H13/113) and Ghana Health Service (Protocol ID: GHS-ERC: 01/05/14). Written informed consent were obtained from all participants. Respondents were informed in a Ghanaian language (often Twi and Ga) or English about their rights of voluntary participation and withdrawal from the study. They were aware that deciding not to participate in the study would not affect their care at these facilities. The anonymity of the data was assured.

Results

Sociodemographic characteristics

Two hundred and thirty (261) cervical cancer cases were seen over the study period at the two centres, of whom 84 were excluded for various reasons, leaving 177 for analysis (Fig 1). Of the 267 potential controls contacted for inclusion into the study, 201 were included in the final analysis, while 66 were excluded (Fig 1). Hence, HPV DNA data were analysed for 177 women with cervical cancer (cases) and 201 without cancer (control). The sociodemographic characteristics of the cases and control are compared in Table 1. Women with cervical cancer were diagnosed at older ages compared to the age at which controls were recruited into the study (median ages, 57 years vs 34 years; p < 0.001). Women with cervical cancer were more likely to be separated/divorced/widowed or unemployed and less likely to live in the metropolitan area or attain secondary or tertiary education compared to women without cervical cancer (all p-value <0.001). The cases and controls did not differ significantly regarding ethnicity and religion.

Fig 1. Summary of the study participants’ selection.

Fig 1

Table 1. Distribution of baseline characteristics of the subjects.

Characteristics Case Control
n (%) n (%)
Age group at diagnosis (years)
 <40 12 (6.8) 138 (68.7)
 40–49 32 (18.1) 45 (22.4)
 50–59 52 (29.4) 8 (4.0)
 ≥60 81 (45.8) 10 (5.0)
 Median (IQR) 57 (IQR 48.5–70) 34 (IQR 32–58)
Region of residence
 Metropolitan 93 (52.5) 179 (89.1)
 Urban 65 (36.7) 20 (10.0)
 Semi-urban 19 (10.7) 2 (1.0)
Religion
 Christian 152 (85.9) 181 (90.1)
 Muslim/other 25 (14.1) 19 (9.5)
 Unknown 0 (0.0) 1(0.5)
Ethnicity
 Ewe 29 (16.4) 24 (11.9)
 Akan 107 (60.5) 118 (58.7)
 Ga-Adangbe 12 (6.8) 30 (14.9)
 Other 29 (16.4) 29 (14.4)
Marital status
 Never Married 2 (1.1) 60 (29.9)
 Married 83 (46.9) 116 (57.7)
 Separated/divorced/widowed 92 (52.0) 25(12.4)
Level of education
 No formal education 74 (41.8) 21(10.5)
 Primary 35 (19.8) 24 (11.9)
 Secondary 55 (31.1) 113 (56.2)
 Tertiary 12 (6.8) 41(20.4)
 Unknown 1(0.6) 2(1.0)
 Other 35 (19.8) 24 (11.9)
Occupation
 Trader 38 (21.5) 74 (36.8)
 Farmer 31 (17.5) 5 (2.5)
 Teacher 7 (4.0) 6 (3.0)
 Hairdresser/seamstress 2 (1.1) 34 (16.9)
 Other 12 (6.8) 40 (19.9)
 None 82 (46.3) 38 (18.9)
 Unknown 5(2.8) 4(2.0)

HPV DNA positivity

The prevalence of HPV genotypes among those with and those without cervical cancer is shown in Table 2. HPV infections were detected in 84.8% of women with cervical cancer, the majority being the high-risk oncogenic types; HR-HPV infections (89.9%) and LR-HPV infections (10.1%). The most frequently identified HPV genotypes in a descending order of frequency were HPV16 (41.2%), HPV18 (24.9%), HPV45 (16.4%), HPV35 (9.6%) and HPV52 (5.6%). For LR HPV, the non-vaccine HPV genotypes 42, 43 and 44 were more prevalent (7.9%) than the vaccine-type HPV 6/11 (1.1%).

Table 2. The prevalence of vaccine targeted, and non-vaccine targeted human papillomavirus among women with and without cervical cancer in Ghana.

Case (N = 177) Control (N = 201) Total (N = 378)
HPV type Single Multiple Total (%) Single multiple Total (%) Single Multiple Total (%)
HPV - - - 28 (15.8) - - 109 (54.2) - - 137 (36.2)
HPV + 87 62 149 (84.2) 63 29 92 (45.8) 150 91 241 (63.8)
LR HPV+ 2 13 15 (10.1) 8 17 25 (12.4) 10 30 40 (10.6)
HR HPV+ 85 49 134 (89.9) 55 12 67 (33.3) 140 61 201(53.2)
VT-HPV 1
 HPV18 24 20 44 (24.9) 0 1 1 (0.5) 24 21 45 (11.9)
 HPV16 41 32 73 (41.2) 1 1 2 (1.0) 42 33 75 (20.6)
 HPV 31 0 0 0 0 0 0 0 0 0
 HPV 33 0 1 1 (0.6) 1 0 1 (0.5) 1 1 2 (0.5)
 HPV 45 9 20 29 (16.4) 1 4 5 (2.5) 10 24 34 (9.0)
 HPV 52 0 10 10 (5.6) 17 13 30 (14.9) 17 23 40 (10.6)
 HPV 58 0 4 4 (2.3) 2 0 2 (1.0) 2 4 6 (1.6)
 HPV 6/11 0 2 2 (1.1) 2 2 4 (2.0) 2 4 6 (1.6)
 Subtotal 74 89 163 (92.1) 24 21 45 98 110 208 (55.0)
NVT-HPV 2
 HPV 35 3 14 17 (9.6) 3 10 13 (6.5) 6 24 30 (7.9)
 HPV 39 1 7 8 (4.5) 2 4 6 (3.0) 3 11 14 (3.7)
 HPV 51 2 7 7 (4.0) 3 3 6 (3.0) 3 10 13 (3.5)
 HPV 56 1 4 5 (2.8) 3 6 9 (4.5) 4 10 14 (3.7)
 HPV 59 0 3 3 (1.7) 1 1 2 (1.0) 1 4 5 (1.3)
 HPV 66 3 4 7 (4.0) 18 13 31 (15.4) 21 17 39 (10.3)
 HPV 68 1 5 6 (3.4) 3 3 6 (3.0) 4 8 12 (3.2)
 HPV 42 0 2 2 (1.1) 1 3 4 (2.0) 1 5 6 (1.6)
 HPV 43 1 7 8 (4.5) 4 9 13 (6.5) 5 16 21 (5.6)
 HPV 44 1 3 4 (2.3) 1 8 9 (4.5) 2 11 13 (3.4)
 Subtotal 13 56 69 (37.9) 39 60 99 (49.3) 50 116 166 (43.9)

HPV: human papillomavirus; LR HPV: low-risk human papillomavirus HR HPV: high-risk human papillomavirus; VT-HPV: vaccine targeted human papillomavirus; NVT-HPV: non-vaccine targeted human papillomavirus virus

Among women without cervical cancer, the HPV prevalence was 45.8%; HR HPV infection (33.3%) and LR HPV infection (12.4%). The type-specific distribution of single infections, in descending order of frequency was HPV66 (15.4%), HPV52 (14.9%) HPV 35 (6.5%), HPV43 (6.2%), HPV31 (13.5%) and HPV52 (12.8%). With regards to LR HPV, the prevalence of the non-vaccine HPV genotypes 42, 43 and 44 (13%) was six and a half-fold the prevalence of HPV 6/11(2.0%). Non-vaccine types HPV66 and 35 were the most dominant non-vaccine genotypes in women with cervical cancer and those without cervical cancer. HPV 35 was more prevalent among women with cervical cancer, while HPV66 was more prevalent among women without cervical cancer.

Multiple infection with HPV 31 and 33, a vaccine type, were low among women with and those without cervical cancer (Fig 2). The non-vaccine types, HPV 35, 52, and 39, were frequent among women with cervical cancer.

Fig 2. Pattern of common HPV multiple infections in women with and without cervical cancer.

Fig 2

Note: HPV: Human papillomavirus.

Risk of cervical cancer and HPV positivity

Cervical cancer risk was associated with a positive HPV test (AOR 5.78; 95% CI: 2.92–11.42), infection with any of the HR HPV types (AOR: 5.56; 95% CI: 3.27–13.16) and multiple HPV infections (AOR: 9.57 95% CI 4.06–22.56) (Table 3).

Table 3. Risk of cervical cancer by HPV infection.

Characteristic Cases (N = 177) Control (N = 201) Total (N = 378) COR (95% CI) AOR (95% CI)
n (%) n (%) n (%)
HPV DNA positivity
 HPV- 27 (15.3) 109 (54.2) 136 (36.0) 1 1
 HPV+ 150 (84.8) 92 (45.8) 242 (64.0) 6.58 (4.01–10.80) 5.78 (2.92–11.42)
Multiple HPV types
 HPV- 27 (15.3) 109 (54.2) 136 (36.0) 1 1
 HPV+ (1 type) 88 (49.7) 63 (31.3) 151 (40.0) 5.64 (3.32–9.59) 4.48 (2.16–9.27)
 HPV+ (>1 types) 62 (35.0) 29 (14.4) 91 (24.1) 8.63 (4.69–15.88) 9.57 (4.06–22.56)

AOR: Adjusted odds ratio; CI confidence interval, COR: Crude odds ratio; HPV: Human papillomavirus; DNA: deoxyribonucleic acid.

The model included positive HPV DNA test and multiple infection. Cervical cancer risk was associated with a positive HPV test, infection with any of the high-risk HPV types and multiple HPV infections.

Age-specific HPV infection

Women younger than 40 years of age had more (68.7%) single-type and multiple-type infections (Table 4), with the prevalence, generally declining with age.

Table 4. Age-specific prevalence of HPV DNA in control women.

HPV+ (1 type) HPV+ (2 type) HPV+ (3 types) HPV+ (>3 types) Total
(N = 63) (N = 15) (N = 15) (N = 15) (N = 201)
n (%) n (%) n (%) n (%) n (%)
Age group (years)
<40 37 (58.7) 13 (86.7) 4 (66.7) 6 (75.0) 138 (68.7)
40–49 19 (30.2) 1 (6.7) 2 (33.3) 1 (12.5) 45 (22.4)
50–59 3 (4.8) 0 (0.0) 0(0.0) 0(0.0) 8 (4.0)
≥60 4 (6.4) 1 (6.7) 0(0.0) 1(12.5) 10 (5.0)

HPV: Human papillomavirus

Discussion

Accurate epidemiological information on HPV infections is essential for cervical cancer prevention through HPV DNA testing and vaccination with regional-specific HPV preventive vaccines. The HPV genotypes 16, 18, 45, 35 and 52 were the most common types identified in women with cervical cancer, and in decreasing order, genotypes 66, 52, 35, 56 and 45 were prevalent in women without cancer. High-risk HPV infections are highly prevalent among Ghanaian women, with an estimated cervical cancer risk of about six- to ten-fold in a positive HPV test.

The case differed significantly from the controls regarding age, residence, marital status, level of education and occupation. The risk of cervical cancer is higher in rural disease [28]. Most women with cervical cancer were likely to have been referred from primary health care centres in their towns and communities. However, controls were women seeking healthcare for reasons other than cervical cancer. Therefore, controls were likely to live in areas where the tertiary institutions are situated, which are metropolitan.

The HPV genotypes distribution, as observed, is concordant with sub-regional data [13]. The differences in HPV infection profile between women with and without the cancer is dependent on the ability of the immune system to eliminate the infection. The HPV infection profile at any point represents a cocktail of persistent and new infections. Krings et al. reported 6.7% and 21.2% rates of new and old HPV infections respectively, among in a cohort of healthy women after a 4-years of residence in Ghana [29]. HPV 16 and 18, despite their low infection rate among the healthy individuals, were well represented among the cases, confirming their ability to resist clearance. HPV45 showed a similar trend to HPVs 16 and 18.

The bivalent vaccines (containing type 16 and 18) have exhibited significant cross-protection efficacy against CIN from infections of type HPV31 and HPV33 [30]. It is interesting to note that none of the surveyed women tested positive for the HPV 31, a vaccine-targeted HPV. Low infection rates from this genotype have also been reported in earlier studies [29, 31]. This supports the suggestion that HPV31 infections rapidly clear after primary contact, reducing its carcinogenic potential [11]. A similar clearance pattern is seen in HPV 66 infections, particularly in young women [32], which might account for a relatively lower infection rate of the genotype among the cases despite being the highest HPV infection detected in the women without cancer. Infections with HPV35, a nonvaccine genotype, were common irrespective of group, suggesting their possible role in cervical carcinogenesis in Ghana is unclear. Several studies in the sub-region have documented significant levels of HPV 35 infections in women from a wide spectrum of the female population [25, 3335]. Scanty data exist on low-risk HPV infection in Sub-Saharan Africa. The prevalence of condyloma associated low-risk HPV was higher (HPV 6/11 versus HPV 43/44, 2.0% and 11%, respectively) than the average rate in West Africa (2%) and high compared to rates reported in the general population in Southern Africa (4%) and in Eastern Africa (8%). In this study, non-vaccine low-risk types, 43 and 44 featured more prominently than HPV 6/11. These dynamics in low-risk HPV prevalence and distribution may be influenced by lack of systematic HPV vaccination programmes.

Cervical cancer is essentially infective in origin, and persistent high-risk human papillomavirus (HPV) infection is central in tumorigenesis [36, 37]. Co-infection with multiple HPV types is associated with longer infection duration and a higher risk for cervical cancer [38, 39]. Multiple-type infections involving HPV 16, 18, 35, 52 and 45 are likely to persist and elude clearance by the immune system, a prerequisite for the development of the cancer [29, 4042]. In the current study, compared to participants with a negative test, those who tested positive to any high-risk genotype had a 5-10-fold increase in the risk of cervical cancer. HPV 16 and 18, like in other regions, were found to be the main contributors to cervical carcinogenesis in Ghana.

Knowledge of genotypic distribution in a specific population has implications for vaccine choice and predicted impact. Largely, the protection afforded by the HPV vaccine is type-specific [18]. The results of this study indicate that combating persistent infection of HPV 16, 18, 45, 35 and 52 will be essential in consideration for regional specific HPV vaccines and DNA screening tests. The results suggest that 66.1% and 67.2% of cervical cancer diagnosed in Ghana could be prevented with widespread licensed bivalent and quadrivalent vaccination, respectively. Nonavalent vaccine, provides additional cover for HPV 31, 33, 45,52 and 58, with an estimated broader protection against cervical cancer (92.1%).

Age is one of the most important risk factors of HPV infection [43]. The prevalence at different ages, is critical for designing age-specific prophylactic HPV vaccination program. Our study observed two peaks in HPV prevalence. This observation is consistent with available data in Ghana [8, 44]. The highest prevalence was observed in women younger than 40 years. Non-existence of a national or systematic vaccination programme explains the high overall prevalence of the infection.

HPV vaccination of young adolescents in Ghana is possible via the established infrastructure and logistics system provided by the Expanded Program on Immunization (EPI). Initiation of HPV vaccination for young adolescents aged 10–14 years may be appropriate to include most HPV naive young girls [16]. A cervical cancer educational and vaccination program (targeted at upper primary and early junior high schools) could be implemented as part of a national cervical cancer control program. Multiple factors, including host susceptibility to HPV [45] and senescence probably explain the second peak, seen in women older than 60 years. Prioritizing screening for women 50 years and above when resources are limited may be worthwhile because the median age of women with cervical cancer in this study was 57 years, and a third of all the cancers were diagnosed in those aged 50 and above. However, HPV DNA based testing in women aged 30 years and above is the most preferred and widely used cervical cancer screening test globally [46].

The major strength of this study was that it provided the comparative distribution and prevalence of HPV genotype in women with and without cervical cancer at the two largest cervical cancer treatment centres in the country. Information from these centres may have a significant role in decisions regarding the national cervical cancer prevention programmes, i.e., HPV vaccination and HPV DNA testing for the control of cervical cancer in Ghana.

Our study had a few limitations. HPV genotype prevalence and distribution may differ among regions within the same country. Although most cervical cancer diagnosed and treated in Ghana are managed at Korle Bu and Komfo Anokye Teaching Hospitals, this information may not be generalizable to the entire cervical cancer population or the HPV infection burden of the general female population. Nevertheless, our HPV infection profile of women studied is concordant with many studies in Ghana and other countries in the sub-region. Three specimens were collected: exfoliated cervical cells, fresh biopsy, and paraffin-embedded samples. HPV genotyping from a cervical sample is influenced by specimen type [47, 48]. However, a validation study comparing HPV DNA detection rates from exfoliated cervical cells and biopsy specimens from the same subject did not detect a significant difference [49]. Other studies have also reported high levels of agreement between paraffin-embedded tissue with other types of samples. A disadvantage of paraffin-embedded samples is the risk of degradation of DNA and the possibility of a negative test as the sample ages. This phenomenon was unlikely as the specimens were from women newly diagnosed with cervical cancer. HPV DNA detection assays vary in their sensitivity and ability to detect multiple HPV types [50]. The sensitivity of the nested multiplex assay is comparable to that of the PGMY09/11 assay, which is considered one of the most reliable assays for HPV DNA detection and typing. The nested multiplex PCR assay may not detect every HPV genotype associated with cervical cancer, but this is considered unlikely.

While HPV vaccination can be expected to reduce the incidence of cervical cancer in the long-term, it is necessary to reduce the risk of cervical cancer in those already infected. Therefore, on-going cervical screening will be essential to reducing the burden of cervical cancer in Ghana for several decades to come. Currently, Ghana does not have a national HPV screening program for cervical cancer. However, there are some public and private health facilities that offer such services. The current study provides useful information on the type of HPV likely to lead to cervical cancer and may help in the triage of women for follow-ups.

Conclusion

Women with cervical cancer in Ghana have HPV infection with multiple genotypes, including some non-vaccine genotypes, with an estimated cervical cancer risk of about six- to ten-fold in the presence of a positive HPV test. HPV DNA testing for cervical screening and multivalent vaccine targeted at the most prevalent HPV types will be a valuable contribution to improve Ghana’s cervical cancer control programme than the currently available licensed vaccine. Large population-based studies are required in countries where cervical cancer is most prevalent to determine non-vaccine HPV genotypes which should be considered for the next-generation.

Supporting information

S1 File

(DOCX)

Acknowledgments

We would like to thank the participants of this study.

Data Availability

Data cannot be shared publicly because of ethical concerns. Data will be available from the Ghana Health Service Ethics Committee (contact via ethics.research@ghsmail.org) for researchers who meet the criteria for access to confidential data.

Funding Statement

The authors received no specific funding for this work. However, The Department of Preventive and Social Medicine and the Directors’ Cancer Research Trust provided funding for HPV DNA testing. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

References

  • 1.Laryea DO, Awuah B, Amoako YA, Osei-Bonsu E, Dogbe J, Larsen-Reindorf R, et al. Cancer incidence in Ghana, 2012: evidence from a population-based cancer registry. BMC Cancer. 2014;14:362. doi: 10.1186/1471-2407-14-362 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 2.Nartey Y, Hill PC, Amo-Antwi K, Nyarko KM, Yarney J, Cox B. Characteristics of Women Diagnosed with Invasive Cervical Cancer in Ghana. Asian Pac J Cancer Prev. 2018;19(2):357–63. doi: 10.22034/APJCP.2018.19.2.357 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 3.Nartey Y, Hill PC, Amo-Antwi K, Nyarko KM, Yarney J, Cox B. Factors Contributing to the Low Survival Among Women With a Diagnosis of Invasive Cervical Cancer in Ghana. Int J Gynecol Cancer. 2017. [DOI] [PubMed] [Google Scholar]
  • 4.Walboomers JM, Jacobs MV, Manos MM, Bosch FX, Kummer JA, Shah KV, et al. Human papillomavirus is a necessary cause of invasive cervical cancer worldwide. J Pathol. 1999;189(1):12–9. doi: [DOI] [PubMed] [Google Scholar]
  • 5.Loud JT, Murphy J. Cancer Screening and Early Detection in the 21(st) Century. Semin Oncol Nurs. 2017;33(2):121–8. doi: 10.1016/j.soncn.2017.02.002 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 6.Ghittoni R, Accardi R, Chiocca S, Tommasino M. Role of human papillomaviruses in carcinogenesis. Ecancermedicalscience. 2015;9:526-. doi: 10.3332/ecancer.2015.526 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 7.Bernard HU, Burk RD, Chen Z, van Doorslaer K, zur Hausen H, de Villiers EM. Classification of papillomaviruses (PVs) based on 189 PV types and proposal of taxonomic amendments. Virology. 2010;401(1):70–9. doi: 10.1016/j.virol.2010.02.002 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 8.Donkoh ET, Asmah RH, Agyemang-Yeboah F, Dabo EO, Wiredu EK. Prevalence and Distribution of Vaccine-Preventable Genital Human Papillomavirus(HPV) Genotypes in Ghanaian Women Presenting for Screening. Cancer Control. 2022;29:10732748221094721-. doi: 10.1177/10732748221094721 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 9.Egawa N, Doorbar J. The low-risk papillomaviruses. Virus Res. 2017;231:119–27. doi: 10.1016/j.virusres.2016.12.017 [DOI] [PubMed] [Google Scholar]
  • 10.Herrero R, Hildesheim A, Bratti C, Sherman ME, Hutchinson M, Morales J, et al. Population-based study of human papillomavirus infection and cervical neoplasia in rural Costa Rica. J Natl Cancer Inst. 2000;92(6):464–74. doi: 10.1093/jnci/92.6.464 [DOI] [PubMed] [Google Scholar]
  • 11.Lehtinen M, Paavonen J, Wheeler CM, Jaisamrarn U, Garland SM, Castellsague X, et al. Overall efficacy of HPV-16/18 AS04-adjuvanted vaccine against grade 3 or greater cervical intraepithelial neoplasia: 4-year end-of-study analysis of the randomised, double-blind PATRICIA trial. Lancet Oncol. 2012;13(1):89–99. doi: 10.1016/S1470-2045(11)70286-8 [DOI] [PubMed] [Google Scholar]
  • 12.Krings A, Dunyo P, Pesic A, Tetteh S, Hansen B, Gedzah I, et al. Characterization of Human Papillomavirus prevalence and risk factors to guide cervical cancer screening in the North Tongu District, Ghana. PLoS One. 2019;14(6):e0218762. doi: 10.1371/journal.pone.0218762 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 13.Bruni L B-RL, Serrano B, Brotons M, Cosano R, Muñoz J, Bosch FX, et al. X. C. ICO Information Centre on HPV and Cancer (HPV Information Centre). Human Papillomavirus and Related Diseases in Africa. Summary Report 2014-04-08.
  • 14.Liu G, Sharma M, Tan N, Barnabas RV. HIV-positive women have higher risk of human papilloma virus infection, precancerous lesions, and cervical cancer. Aids. 2018;32(6):795–808. doi: 10.1097/QAD.0000000000001765 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 15.Toh ZQ, Kosasih J, Russell FM, Garland SM, Mulholland EK, Licciardi PV. Recombinant human papillomavirus nonavalent vaccine in the prevention of cancers caused by human papillomavirus. Infect Drug Resist. 2019;12:1951–67. doi: 10.2147/IDR.S178381 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 16.Vodicka E, Nonvignon J, Antwi-Agyei KO, Bawa J, Clark A, Pecenka C, et al. The projected cost-effectiveness and budget impact of HPV vaccine introduction in Ghana. Vaccine. 2022;40 Suppl 1:A85–a93. doi: 10.1016/j.vaccine.2021.07.027 [DOI] [PubMed] [Google Scholar]
  • 17.Mujuni F, Mirambo MM, Rambau P, Klaus K, Andreas M, Matovelo D, et al. Variability of high risk HPV genotypes among HIV infected women in Mwanza, Tanzania- the need for evaluation of current vaccine effectiveness in developing countries. Infectious Agents and Cancer. 2016;11(1):49. doi: 10.1186/s13027-016-0097-2 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 18.Wang JW, Roden RB. Virus-like particles for the prevention of human papillomavirus-associated malignancies. Expert Rev Vaccines. 2013;12(2):129–41. doi: 10.1586/erv.12.151 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 19.Chrysostomou AC, Kostrikis LG. Methodologies of Primary HPV Testing Currently Applied for Cervical Cancer Screening. Life (Basel). 2020;10(11). doi: 10.3390/life10110290 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 20.World Health Organization. World Health Assembly adopts global strategy to accelerate cervical cancer elimination Geneva: World Health Organization: World Health Organization; 2022. Available from: https://www.who.int/news/item/19-08-2020-world-health-assembly-adopts-global-strategy-to-accelerate-cervical-cancer-elimination.
  • 21.Solomon D, Davey D, Kurman R, Moriarty A, O’Connor D, Prey M, et al. The 2001 Bethesda System: terminology for reporting results of cervical cytology. Jama. 2002;287(16):2114–9. doi: 10.1001/jama.287.16.2114 [DOI] [PubMed] [Google Scholar]
  • 22.World Health Organization. WHO guideline for screening and treatment of cervical pre-cancer lesions for cervical cancer prevention, second edition. Geneva: World Health Organization. [PubMed]
  • 23.Lagheden C, Eklund C, Kleppe SN, Unger ER, Dillner J, Sundström K. Validation of a standardized extraction method for formalin-fixed paraffin-embedded tissue samples. J Clin Virol. 2016;80:36–9. doi: 10.1016/j.jcv.2016.04.016 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 24.Sotlar K, Diemer D, Dethleffs A, Hack Y, Stubner A, Vollmer N, et al. Detection and typing of human papillomavirus by e6 nested multiplex PCR. Journal of clinical microbiology. 2004;42(7):3176–84. doi: 10.1128/JCM.42.7.3176-3184.2004 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 25.Obiri-Yeboah D, Akakpo PK, Mutocheluh M, Adjei-Danso E, Allornuvor G, Amoako-Sakyi D, et al. Epidemiology of cervical human papillomavirus (HPV) infection and squamous intraepithelial lesions (SIL) among a cohort of HIV-infected and uninfected Ghanaian women. BMC Cancer. 2017;17(1):688. doi: 10.1186/s12885-017-3682-x [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 26.Singini MG, Sitas F, Bradshaw D, Chen WC, Motlhale M, Kamiza AB, et al. Ranking lifestyle risk factors for cervical cancer among Black women: A case-control study from Johannesburg, South Africa. PLoS One. 2021;16(12):e0260319. doi: 10.1371/journal.pone.0260319 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 27.Burd EM. Human papillomavirus and cervical cancer. Clinical microbiology reviews. 2003;16(1):1–17. doi: 10.1128/CMR.16.1.1-17.2003 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 28.Chirenje ZM, Rusakaniko S, Akino V, Mlingo M. A review of cervical cancer patients presenting in Harare and Parirenyatwa Hospitals in 1998. Cent Afr J Med. 2000;46(10):264–7. doi: 10.4314/cajm.v46i10.8566 [DOI] [PubMed] [Google Scholar]
  • 29.Krings A, Boateng G, Dunyo P, Amuah JE, Adams RA, Adunyame L, et al. Dynamics of genotype-specific HPV clearance and reinfection in rural Ghana may compromise HPV screening approaches. Papillomavirus Res. 2019;7:45–51. doi: 10.1016/j.pvr.2018.12.004 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 30.Malagón T, Drolet M, Boily MC, Franco EL, Jit M, Brisson J, et al. Cross-protective efficacy of two human papillomavirus vaccines: a systematic review and meta-analysis. Lancet Infect Dis. 2012;12(10):781–9. doi: 10.1016/S1473-3099(12)70187-1 [DOI] [PubMed] [Google Scholar]
  • 31.Keita N, Clifford GM, Koulibaly M, Douno K, Kabba I, Haba M, et al. HPV infection in women with and without cervical cancer in Conakry, Guinea. Br J Cancer. 2009;101(1):202–8. doi: 10.1038/sj.bjc.6605140 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 32.Louvanto K, Rintala MA, Syrjanen KJ, Grenman SE, Syrjanen SM. Genotype-specific persistence of genital human papillomavirus (HPV) infections in women followed for 6 years in the Finnish Family HPV Study. J Infect Dis. 2010;202(3):436–44. doi: 10.1086/653826 [DOI] [PubMed] [Google Scholar]
  • 33.van Aardt MC, Dreyer G, Pienaar HF, Karlsen F, Hovland S, Richter KL, et al. Unique human papillomavirus-type distribution in South African women with invasive cervical cancer and the effect of human immunodeficiency virus infection. Int J Gynecol Cancer. 2015;25(5):919–25. doi: 10.1097/IGC.0000000000000422 [DOI] [PubMed] [Google Scholar]
  • 34.Maranga IO, Hampson L, Oliver AW, He X, Gichangi P, Rana F, et al. HIV Infection Alters the Spectrum of HPV Subtypes Found in Cervical Smears and Carcinomas from Kenyan Women. Open Virol J. 2013;7:19–27. doi: 10.2174/1874357901307010019 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 35.Didelot-Rousseau MN, Nagot N, Costes-Martineau V, Valles X, Ouedraogo A, Konate I, et al. Human papillomavirus genotype distribution and cervical squamous intraepithelial lesions among high-risk women with and without HIV-1 infection in Burkina Faso. Br J Cancer. 2006;95(3):355–62. doi: 10.1038/sj.bjc.6603252 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 36.Ho GY, Burk RD, Klein S, Kadish AS, Chang CJ, Palan P, et al. Persistent genital human papillomavirus infection as a risk factor for persistent cervical dysplasia. J Natl Cancer Inst. 1995;87(18):1365–71. doi: 10.1093/jnci/87.18.1365 [DOI] [PubMed] [Google Scholar]
  • 37.Muñoz N. Human papillomavirus and cancer: the epidemiological evidence. J Clin Virol. 2000;19(1–2):1–5. doi: 10.1016/s1386-6532(00)00125-6 [DOI] [PubMed] [Google Scholar]
  • 38.van der Graaf Y, Molijn A, Doornewaard H, Quint W, van Doorn LJ, van den Tweel J. Human papillomavirus and the long-term risk of cervical neoplasia. Am J Epidemiol. 2002;156(2):158–64. doi: 10.1093/aje/kwf013 [DOI] [PubMed] [Google Scholar]
  • 39.Trottier H, Mahmud S, Costa MC, Sobrinho JP, Duarte-Franco E, Rohan TE, et al. Human papillomavirus infections with multiple types and risk of cervical neoplasia. Cancer Epidemiol Biomarkers Prev. 2006;15(7):1274–80. doi: 10.1158/1055-9965.EPI-06-0129 [DOI] [PubMed] [Google Scholar]
  • 40.Louvanto K, Syrjänen KJ, Rintala MAM, Grénman SE, Syrjänen SM. Genotype-specific clearance of genital human papillomavirus (HPV) infections among mothers in the Finnish family HPV study. Journal of clinical microbiology. 2010;48(8):2665–71. doi: 10.1128/JCM.00783-10 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 41.Akaaboune M, Kenfack B, Viviano M, Temogne L, Catarino R, Tincho E, et al. Clearance and persistence of the human papillomavirus infection among Cameroonian women. Womens Health (Lond). 2018;14:1745506518805642. doi: 10.1177/1745506518805642 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 42.Schmeink CE, Melchers WJ, Siebers AG, Quint WG, Massuger LF, Bekkers RL. Human papillomavirus persistence in young unscreened women, a prospective cohort study. PLoS One. 2011;6(11):e27937. doi: 10.1371/journal.pone.0027937 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 43.Antonsson A, Cornford M, Perry S, Davis M, Dunne MP, Whiteman DC. Prevalence and risk factors for oral HPV infection in young Australians. PLoS One. 2014;9(3):e91761. doi: 10.1371/journal.pone.0091761 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 44.Awua AK, Adanu RMK, Wiredu EK, Afari EA, Severini A. Differences in age-specific HPV prevalence between self-collected and health personnel collected specimen in a cross-sectional study in Ghana. Infectious Agents and Cancer. 2017;12(1):26. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 45.Althoff KN, Paul P, Burke AE, Viscidi R, Sangaramoorthy M, Gravitt PE. Correlates of cervicovaginal human papillomavirus detection in perimenopausal women. J Womens Health (Larchmt). 2009;18(9):1341–6. doi: 10.1089/jwh.2008.1223 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 46.World Health Organization. New recommendations for screening and treatment to prevent cervical cancer. Geneva: World Health Organization: World Health Organization; 2022 [Available from: https://www.who.int/news/item/06-07-2021-new-recommendations-for-screening-and-treatment-to-prevent-cervical-cancer.
  • 47.Castro FA, Koshiol J, Quint W, Wheeler CM, Gillison ML, Vaughan LM, et al. Detection of HPV DNA in paraffin-embedded cervical samples: a comparison of four genotyping methods. BMC Infectious Diseases. 2015;15(1):544. doi: 10.1186/s12879-015-1281-5 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 48.Rohner E, Edelman C, Sanusi B, Schmitt JW, Baker A, Chesko K, et al. Extended HPV Genotyping to Compare HPV Type Distribution in Self- and Provider-Collected Samples for Cervical Cancer Screening. Cancer Epidemiol Biomarkers Prev. 2020;29(12):2651–61. doi: 10.1158/1055-9965.EPI-20-0674 [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 49.de Sanjose S, Bosch XF, Munoz N, Chichareon S, Ngelangel C, Balaguero L, et al. Screening for genital human papillomavirus: results from an international validation study on human papillomavirus sampling techniques. Diagn Mol Pathol. 1999;8(1):26–31. doi: 10.1097/00019606-199903000-00005 [DOI] [PubMed] [Google Scholar]
  • 50.Roberts CC, Swoyer R, Bryan JT, Taddeo FJ. Comparison of real-time multiplex human papillomavirus (HPV) PCR assays with the linear array HPV genotyping PCR assay and influence of DNA extraction method on HPV detection. Journal of clinical microbiology. 2011;49(5):1899–906. doi: 10.1128/JCM.00235-10 [DOI] [PMC free article] [PubMed] [Google Scholar]

Decision Letter 0

Gulzhanat Aimagambetova

14 Nov 2022

PONE-D-22-28450Human papillomavirus genotype distribution among women with and without cervical cancer: Implication for vaccination and screening in Ghana.PLOS ONE

Dear Dr. Yvonne Nartey,

Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.

Please submit your revised manuscript by December 29, 2022. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.

Please include the following items when submitting your revised manuscript:

  • A rebuttal letter that responds to each point raised by the academic editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'.

  • A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'.

  • An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'.

If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter.

If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols.

We look forward to receiving your revised manuscript.

Kind regards,

Gulzhanat Aimagambetova

Academic Editor

PLOS ONE

Journal requirements:

When submitting your revision, we need you to address these additional requirements.

1.  Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at

https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf  and

https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf

2. Please provide additional details regarding participant consent. In the ethics statement in the Methods and online submission information, please ensure that you have specified what type you obtained (for instance, written or verbal, and if verbal, how it was documented and witnessed). If your study included minors, state whether you obtained consent from parents or guardians. If the need for consent was waived by the ethics committee, please include this information.

3. Our staff editors have determined that your manuscript is likely within the scope of our Early Detection, Screening and Diagnosis of Cancer Call for Papers. This editorial initiative is headed by in-house PLOS editors. This Call for Papers aims to explore recent advances in the early detection of cancer and implications of these advances for patient survival. Additional information can be found on our announcement page: https://collections.plos.org/call-for-papers/early-detection-screening-and-diagnosis-of-cancer/

If you would like your manuscript to be considered for this collection, please let us know in your cover letter and we will ensure that your paper is treated as if you were responding to this call. Please note that being considered for the Call for Papers does not require additional peer review beyond the journal’s standard process and will not delay the publication of your manuscript if it is accepted by PLOS ONE. If you would prefer to remove your manuscript from collection consideration, please specify this in the cover letter.

4. Please include a complete copy of PLOS’ questionnaire on inclusivity in global research in your revised manuscript. Our policy for research in this area aims to improve transparency in the reporting of research performed outside of researchers’ own country or community. The policy applies to researchers who have travelled to a different country to conduct research, research with Indigenous populations or their lands, and research on cultural artefacts. The questionnaire can also be requested at the journal’s discretion for any other submissions, even if these conditions are not met.  Please find more information on the policy and a link to download a blank copy of the questionnaire here: https://journals.plos.org/plosone/s/best-practices-in-research-reporting. Please upload a completed version of your questionnaire as Supporting Information when you resubmit your manuscript.

5. We note that the grant information you provided in the ‘Funding Information’ and ‘Financial Disclosure’ sections do not match.

When you resubmit, please ensure that you provide the correct grant numbers for the awards you received for your study in the ‘Funding Information’ section.

6. Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice.

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

**********

2. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: This is an well written article on the topic of HPV in Ghana. The analysis presented in the paper are really interesting. I would leave a minor comment on enriching the discussion. In the last paragraph, you might include two or three sentences on Ghana's existing HPV screening program and how your study findings can improve the existing approach.

Reviewer #2: Nartey and colleagues present an interesting study on the prevalence of different HPV genotypes among women in Ghana. Studies like this are particularly important in understanding if newer vaccines are needed to treat different strains and the effectiveness of HPV vaccination in other areas. Additional comments are noted below.

*In line 109, authors state that HPV vaccine effectiveness studies have mainly been conducted among Caucasians. While there is a lack of diversity in research participants in biomedical research, this statement ignores the positive gains made in preventing cervical cancer in multiple countries that has had benefits for people across multiple races. Additionally, this statement seems out of place considering the authors do not mention race and ethnicity throughout the article. The authors should consider either removing this statement are include additional information about how research is needed among different races/ ethnicities and results from this study differ from previous studies conducted among majority Caucasian populations.

*It's unclear if the authors are trying to promote the usage of currently available HPV vaccines in Ghana or if they are requesting a new one. It would be helpful if the authors were clearer about this. Especially in lines 470-471 in the conclusion.

**********

6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: Yes: Abdullah Nurus Salam Khan

Reviewer #2: No

**********

[NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.]

While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step.

PLoS One. 2023 Jan 19;18(1):e0280437. doi: 10.1371/journal.pone.0280437.r002

Author response to Decision Letter 0


15 Dec 2022

22nd November, 2022

Dear Dr Aimagambetova,

We thank you for taking the time to carefully read our manuscript and for the valuable comments you have provided, which helped us in improving the revised paper that we are re-submitting. We have made all requested changes, ensured it complies with all the journal requirements.

Yours truly,

Dr Yvonne Nartey

Here is our point-by-point response to the reviewer’s comments:

(Reviewer comments in bold)

This is an well written article on the topic of HPV in Ghana. The analysis presented in the paper are really interesting. I would leave a minor comment on enriching the discussion. In the last paragraph, you might include two or three sentences on Ghana's existing HPV screening program and how your study findings can improve the existing approach.

Response: We have, accordingly, added the following sentence to the last paragraph of the discussion session.

“Currently, Ghana do not have a national HPV screening program for cervical cancer. However, there are some public and private health facilities that offer such services. The current study provides useful information on the type of HPV likely to lead to cervical cancer and may help in the triage of women for follow-ups. “ - Page 20, paragraph 1, line 2.

Nartey and colleagues present an interesting study on the prevalence of different HPV genotypes among women in Ghana. Studies like this are particularly important in understanding if newer vaccines are needed to treat different strains and the effectiveness of HPV vaccination in other areas. Additional comments are noted below.

In line 109, authors state that HPV vaccine effectiveness studies have mainly been conducted among Caucasians. While there is a lack of diversity in research participants in biomedical research, this statement ignores the positive gains made in preventing cervical cancer in multiple countries that has had benefits for people across multiple races. Additionally, this statement seems out of place considering the authors do not mention race and ethnicity throughout the article. The authors should consider either removing this statement are include additional information about how research is needed among different races/ ethnicities and results from this study differ from previous studies conducted among majority Caucasian populations.

Response: We have, accordingly, revised the sentence to reflect the reviewer comment. The sentence has been altered to the following:

“The available HPV vaccines have activity against up to nine HPV types (6, 11, 16,18, 31 33 45 52 58)”. – Page5, paragraph 2, line 7.

It's unclear if the authors are trying to promote the usage of currently available HPV vaccines in Ghana or if they are requesting a new one. It would be helpful if the authors were clearer about this. Especially in lines 470-471 in the conclusion.

Response: We have, accordingly, revised the sentence to reflect the reviewer comment. The sentence has been altered to the following:

“HPV DNA testing for cervical screening and multivalent vaccine targeted at the most prevalent HPV types will be a valuable contribution to Ghana’s cervical cancer control programme than the currently available licensed vaccine.” – page 20, paragraph 2, line 8.

Attachment

Submitted filename: Response to reviewer.docx

Decision Letter 1

Gulzhanat Aimagambetova

2 Jan 2023

Human papillomavirus genotype distribution among women with and without cervical cancer: Implication for vaccination and screening in Ghana.

PONE-D-22-28450R1

Dear Dr. Yvonne Nartey,

We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements.

Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication.

An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org.

If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org.

Kind regards,

Gulzhanat Aimagambetova

Academic Editor

PLOS ONE

Reviewers' comments:

Reviewer's Responses to Questions

Comments to the Author

1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.

Reviewer #1: All comments have been addressed

Reviewer #2: All comments have been addressed

**********

2. Is the manuscript technically sound, and do the data support the conclusions?

The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented.

Reviewer #1: Yes

Reviewer #2: Yes

**********

3. Has the statistical analysis been performed appropriately and rigorously?

Reviewer #1: Yes

Reviewer #2: Yes

**********

4. Have the authors made all data underlying the findings in their manuscript fully available?

The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.

Reviewer #1: Yes

Reviewer #2: Yes

**********

5. Is the manuscript presented in an intelligible fashion and written in standard English?

PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.

Reviewer #1: Yes

Reviewer #2: Yes

**********

6. Review Comments to the Author

Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)

Reviewer #1: This is a very important paper on the topic. Authors have addressed the comments and feedback adequately.

Reviewer #2: The authors did a great job in addressing reviewer comments! I have no additional comments or concerns about this publication.

**********

7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files.

If you choose “no”, your identity will remain anonymous but your review may still be made public.

Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.

Reviewer #1: Yes: Abdullah Nurus Salam Khan

Reviewer #2: No

**********

Acceptance letter

Gulzhanat Aimagambetova

6 Jan 2023

PONE-D-22-28450R1

Human papillomavirus genotype distribution among women with and without cervical cancer: Implication for vaccination and screening in Ghana.

Dear Dr. Nartey:

I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department.

If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org.

If we can help with anything else, please email us at plosone@plos.org.

Thank you for submitting your work to PLOS ONE and supporting open access.

Kind regards,

PLOS ONE Editorial Office Staff

on behalf of

Dr. Gulzhanat Aimagambetova

Academic Editor

PLOS ONE

Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Supplementary Materials

    S1 File

    (DOCX)

    Attachment

    Submitted filename: Response to reviewer.docx

    Data Availability Statement

    Data cannot be shared publicly because of ethical concerns. Data will be available from the Ghana Health Service Ethics Committee (contact via ethics.research@ghsmail.org) for researchers who meet the criteria for access to confidential data.


    Articles from PLOS ONE are provided here courtesy of PLOS

    RESOURCES