Key Points
Question
What were the characteristics and outcomes of patients admitted to COVID-19 treatment centers during Zambia’s first 4 COVID-19 waves?
Findings
In this cohort study of 3876 patients, across-wave analyses of data, including identification of risk factors for in-hospital mortality in Zambia, were in line with data reported elsewhere. Within-wave analyses revealed a pattern in which it appeared that admission of higher-risk patients was prioritized during periods of surging demand for health services during COVID-19 waves.
Meaning
These findings suggest that increased efforts to expand health system capacity and improve health system resiliency in Zambia and other countries with resource-limited health systems are warranted.
This cohort study examines patient characteristics and risk factors for in-hospital death among patients admitted to COVID-19 treatment centers in Zambia during the COVID-19 epidemic.
Abstract
Importance
Few epidemiologic studies related to COVID-19 have emerged from countries in Africa, where demographic characteristics, epidemiology, and health system capacity differ from other parts of the world.
Objectives
To describe the characteristics and outcomes of patients admitted to COVID-19 treatment centers, assess risk factors for in-hospital death, and explore how treatment center admissions were affected by COVID-19 waves in Zambia.
Design, Setting, and Participants
This retrospective cohort study assessed patients admitted to COVID-19 treatment centers in 5 Zambian cities between March 1, 2020, and February 28, 2022.
Exposures
Risk factors for in-hospital mortality, including patient age and severity of COVID-19, at treatment center admission.
Main Outcomes and Measures
Patient information was collected, including inpatient disposition (discharged or died). Differences across and within COVID-19 waves were assessed. Mixed-effects logistic regression models were used to assess associations between risk factors and in-hospital mortality as well as between characteristics of admitted patients and timing of admission.
Results
A total of 3876 patients were admitted during 4 COVID-19 waves (mean [SD] age, 50.6 [19.5] years; 2103 male [54.3%]). Compared with the first 3 waves (pooled), the proportion of patients who were 60 years or older admitted during wave 4, when the Omicron variant was circulating, was significantly lower (250 of 1009 [24.8%] vs 1116 of 2837 [39.3%]; P < .001). Factors associated with in-hospital mortality included older age (≥60 vs <30 years; adjusted odds ratio [aOR], 3.55; 95% CI, 2.34-5.52) and HIV infection (aOR, 1.39; 95% CI, 1.07-1.79). Within waves, patients who were admitted during weeks 5 to 9 had significantly higher odds of being 60 years or older (aOR, 2.09; 95% CI, 1.79-2.45) or having severe COVID-19 at admission (aOR, 2.49; 95% CI, 2.14-2.90) than those admitted during the first 4 weeks.
Conclusions and Relevance
The characteristics of admitted patients during the Omicron wave and risk factors for in-hospital mortality in Zambia reflect data reported elsewhere. Within-wave analyses revealed a pattern in which it appeared that admission of higher-risk patients was prioritized during periods when there were surges in demand for health services during COVID-19 waves. These findings support the need to expand health system capacity and improve health system resiliency in Zambia and other countries with resource-limited health systems.
Introduction
Like many countries, Zambia is experiencing a COVID-19 epidemic characterized by waves in which steep increases in SARS-CoV-2–positive cases are closely followed by surges in patients with COVID-19 requiring hospitalization. The timing and public health impacts of waves are influenced by a variety of factors, including natural and vaccine-induced immunity,1 waning of such immunity,2 seasonality,3 mitigation measures,4 large events,5 and SARS-CoV-2 variant characteristics.6,7,8,9
Many of the differences between waves can be attributed to the ability of SARS-CoV-2 to mutate and produce characteristics that favor increased transmissibility and immune evasion.10,11 Some variant strains have also demonstrated increased (or decreased) virulence.6,7,8,9 When a new variant emerges or a new wave begins, collection and analysis of epidemiologic data provide useful information for researchers interested in understanding how new mutations affect disease pathogenesis and for public health officials assessing how the variant will affect (or has affected) health systems. Reports describing such analyses are available,9,12,13,14,15 but few are from countries in sub-Saharan Africa, where demographic characteristics, epidemiology, and health system capacity differ from other parts of the world.
Understanding how epidemiologic data collected in Zambia changed across and during COVID-19 waves also has potential to help inform future public health responses. The influence of health system capacity is particularly important to elucidate, because limited health system capacity directly affects downstream epidemiologic indicators during periods of surging demand (eg, hospitalization rates may be affected when hospitals are full, and case fatality proportions may be deflated when community COVID-19 deaths occur). In this report, we examine the characteristics of patients admitted to COVID-19 treatment centers during the COVID-19 epidemic in Zambia, assess risk factors for in-hospital death, and explore how characteristics of admitted patients were affected by periods of surging demand.
Methods
COVID-19 Clinical Outcomes Study
We conducted a retrospective cohort study of patients admitted to COVID-19 treatment centers in Zambia from March 1, 2020, through February 28, 2022. Beginning in March 2020, patients diagnosed with probable or confirmed COVID-19 in Zambia were admitted to Ministry of Health COVID-19 treatment centers that had specifically designated isolation and treatment units staffed by clinicians and nurses trained in COVID-19 clinical management. The study was conceived during the early weeks of the COVID-19 epidemic in Zambia and eventually included COVID-19 treatment centers in 5 of Zambia’s largest cities: Lusaka (4 treatment centers), Ndola, Kitwe, Kabwe, and Livingstone.16 The study protocol was approved by the University of Zambia Biomedical Research Ethics Committee. The study protocol was determined to be research according to the Centers for Disease Control and Prevention (CDC) human research protection procedures, but the CDC investigators did not interact with the study participants or have access to identifiable data or specimens for research purposes. Patients provided verbal consent for care and inclusion in the study. This study followed the Strengthening the Reporting of Observational Studies in Epidemiology (STROBE) reporting guideline.
Per national guidelines, admission to COVID-19 treatment centers was recommended for all patients with severe respiratory illness or those with both mild respiratory illness and risk factors for severe disease.17 Patients at participating treatment centers had demographic and clinical data collected at admission and during hospitalization until they were discharged or died. Data were collected using a standardized case record form adapted from the World Health Organization18 and entered into REDCap (Research Electronic Data Capture) electronic data capture tools by trained staff at a later date.19,20 Severe COVID-19 was defined as having an oxygen saturation level below 90%, having a respiratory rate greater than 30 breaths/min, or needing oxygen therapy.21 HIV status was self-reported, and patients with unknown status or who were deemed eligible and consented for HIV testing were tested at admission. Comorbidities were self-reported and included cardiac disease, hypertension, diabetes, other pulmonary disease, active tuberculosis, previous tuberculosis, asthma, kidney disease, liver disease, neurologic disorder, asplenia, malignant neoplasm, and current smoking. The number of comorbidities (not including HIV infection) was summed for each patient.
National Testing Data, Wave Definitions, and Circulating Variants
National data on daily SARS-CoV-2–positive tests and test positivity rates are collected by the Zambia National Public Health Institute and reported publicly.22 Because of fluctuating testing volumes and incomplete data on national hospitalizations, epidemic waves were defined based on visual inspection of an epidemic curve generated using publicly available data (Figure 1).23 The start of a wave was defined as the date on which a stable number of daily SARS-CoV-2–positive tests transitioned to an increasing number of positive test results, provided that the increase was followed by a peak and a subsequent decline in daily positive test results. The end of a wave was defined as the date on which a decreasing number of daily SARS-CoV-2–positive test results following a peak transitioned to a stable number of daily positive test results. The increase in cases shown on the epidemic curve between April 29, 2020, and June 8, 2020, was not considered a wave because COVID-19 had not yet spread nationally in Zambia (a high proportion of the SARS-CoV-2 testing conducted during that time was related to an outbreak in the rural Nakonde District). Data on relative variant genome frequency by region from the Global Initiative on Sharing Avian Influenza Data (GISAID) were used to define the SARS-CoV-2 variant that was circulating during each wave.24
Figure 1. Daily Confirmed SARS-CoV-2 Cases and Percentage of Positivity in Zambia, 2020-2022.

COVID-19 Vaccination in Zambia
Zambia began offering COVID-19 vaccination before the start of wave 3 in April 2021. The ChAdOx1-S COVID-19 vaccine (AstraZeneca) was the first vaccine type available in Zambia, followed by Ad26.COV2.S (Janssen), mRNA-127 (Moderna), BNT162b2 (Pfizer-BioNTech), and BBIBP-CorV (Sinopharm). An additional vaccine dose after completing a primary vaccine series (ie, booster) became available in January 2022. Estimates for the proportion of Zambia’s population that were vaccinated against COVID-19 (ie, ≥1 vaccine dose) were less than 1% at the start of wave 3 and 4.5% at the start of wave 4.25
Statistical Analysis
Data analyses were conducted across waves and within waves. Data from patients admitted during nonwave periods were excluded (approximately 9% of study patients). Across-wave analyses focused on descriptive statistics and comparing wave 4, which was dominated by SARS-CoV-2 variant of concern Omicron (B.1.1.529) (a variant widely reported to be less likely to cause severe COVID-19),6,26,27 with combined data from waves 1, 2, and 3.
Mixed-effects logistic regression models were used to assess associations between risk factors for poor COVID-19 outcomes and in-hospital mortality in both unadjusted and adjusted models. Risk factors included wave of admission, sex, age, number of self-reported comorbidities, HIV status, COVID-19 severity at admission, and COVID-19 treatment center. Mixed-effects models were used to account for the hierarchical structure of the study data (COVID-19 treatment center included as a random-effects term).
Within-wave analyses were used to investigate whether surges in demand for health services altered the demographic profiles and clinical characteristics of patients admitted to COVID-19 treatment centers. Data from admitted patients were aggregated into 4-week segments within wave periods, with the first segment of each wave beginning on the respective wave’s start date. We assumed, based on anecdotal evidence, that patients admitted during the first 4-week segment of a wave were admitted during a period of baseline health system demand, whereas patients admitted during subsequent 4-week segments were admitted during periods of surging health system demand. Age and COVID-19 disease status for patients admitted during periods of baseline demand (first 4 weeks) were compared with subsequent 4-week segments. Associations between age of 60 years or older and severe COVID-19 at admission and being admitted during a period of baseline demand vs surging demand were assessed using mixed-effects logistic regression models.
Data were analyzed using R software, version 4.02 (R Foundation for Statistical Computing). An α = .05 was used with 2-tailed tests to assess statistical significance.
Results
Patients
A total of 312 937 positive SARS-CoV-2 test results were reported in Zambia by the Zambia National Public Health Institute between March 18, 2020, and March 1, 2022. During that same period, 4208 patients were included in the COVID-19 Clinical Outcomes Study, and 3876 (92.1%) were admitted during wave periods (mean [SD] age, 50.6 [19.5] years; 2103 men [54.3%] and 1765 women [45.5%] [data on sex was missing for 8 patients]).
COVID-19 Waves
Four waves were identified during the study period (Figure 1). Among patients admitted to COVID-19 treatment centers during those waves and included in the study, wave 3 had the highest number of admissions and the highest number of deaths (Table 1). Compared with waves 1, 2, and 3 (pooled), wave 4 had a significantly lower proportion of patients who were male (416 of 1012 [41.1%] vs 1687 of 2856 [59.1%]), who were 60 years or older (250 of 1009 [24.8%] vs 1116 of 2837 [39.3%]), who had hypertension (249 of 1012 [24.6%] vs 1276 of 2864 [44.6%]), who had severe COVID-19 at admission (346 of 989 [35.0%] vs 2001 of 2807 [71.3%]), and who died (131 of 909 [14.4%] vs 700 of 2682 [26.1%]). The proportion of HIV-infected patients did not differ between wave 4 (167 of 920 [18.2%]) and waves 1, 2, and 3 (421 of 2300 [18.3%]).
Table 1. Demographic and Clinical Variables by Wave for Patients Admitted to Participating COVID-19 Treatment Centers in Zambia, 2020-2022a,b.
| Variable | Wave 1 (ancestral lineages; June 27 to October 5, 2020) (n = 558) | Wave 2 (Beta variant [B.1.351]; December 22, 2020, to May 10, 2021) (n = 1052) | Wave 3 (Delta variant [B.1.617]; May 24 to September 1, 2021) (n = 1254) | Wave 4 (Omicron variant [B.1.1.529]) October 12, 2021, to February 5, 2022) (n = 1012) | P valuec |
|---|---|---|---|---|---|
| Sex | |||||
| Male | 349/558 (62.5) | 625/1046 (59.8) | 713/1252 (56.9) | 416/1012 (41.1) | <.001 |
| Female | 209/558 (37.5) | 421/1046 (40.2) | 539/1252 (43.1) | 596/1012 (58.9) | |
| Age, mean (SD), y | 48.9 (16.3) | 54.0 (16.4) | 55.5 (18.0) | 42.1 (22.5) | <.001 |
| Age group, y | |||||
| <30 | 72/558 (12.9) | 76/1030 (7.4) | 110/1249 (8.8) | 364/1009 (36.1) | <.001 |
| 30-39 | 87/558 (15.6) | 116/1030 (11.3) | 155/1249 (12.4) | 211/1009 (20.9) | |
| 40-49 | 143/558 (25.6) | 198/1030 (19.2) | 197/1249 (15.8) | 103/1009 (10.2) | |
| 50-59 | 106/558 (19.0) | 231/1030 (22.4) | 230/1249 (18.4) | 81/1009 (8.0) | |
| ≥60 | 150/558 (26.9) | 409/1030 (39.7) | 557/1249 (44.6) | 250/1009 (24.8) | |
| HIV infection | 106/447 (23.7) | 153/913 (16.8) | 162/940 (17.2) | 167/920 (18.2) | .96 |
| Active tuberculosis | 18/558 (3.2) | 17/1052 (1.6) | 22/1254 (1.8) | 38/1012 (3.8) | .008 |
| Diabetes | 95/558 (17.0) | 226/1052 (21.5) | 257/1254 (20.5) | 72/1012 (7.1) | <.001 |
| Hypertension | 203/558 (36.4) | 511/1052 (48.6) | 562/1254 (44.8) | 249/1012 (24.6) | <.001 |
| No. of self-reported comorbiditiesd | |||||
| 0 | 208/558 (37.3) | 342/1052 (32.5) | 460/1254 (36.7) | 475/1012 (46.9) | <.001 |
| 1-2 | 261/558 (46.8) | 600/1052 (57.0) | 667/1254 (53.2) | 446/1012 (44.1) | |
| ≥3 | 89/558 (15.9) | 110/1052 (10.5) | 127/1254 (10.1) | 91/1012 (8.99) | |
| Severe disease at admissione | 303/557 (54.4) | 802/1045 (76.7) | 896/1205 (74.4) | 346/989 (35.0) | <.001 |
| Deathsf | 91/549 (16.6) | 217/980 (22.1) | 392/1153 (34.0) | 131/909 (14.4) | <.001 |
| Vaccinatedg | NA | NA | 45/1254 (3.6) | 182/1012 (17.9) | <.001 |
Abbreviation: NA, not applicable.
Data are presented as number and total number (percentage) of patients unless otherwise indicated. Patients admitted during nonwave periods were not included: before wave 1: 136; after wave 1: 79; after wave 2: 54; after wave 3: 50; and after wave 4: 13.
In cases where the denominator is less than the wave-specific sample size, data were missing.
Comparison of wave 4 and waves 1, 2, and 3 (pooled). The P value for age group refers to 60 years or older vs younger than 60 years. The P value for number of self-reported comorbidities refers to 0 comorbidities vs 1 or more comorbidities. The χ2 test was used for proportions and the Wilcoxon rank sum test for means. Statistical tests do not account for site-level clustering.
Comorbidities were self-reported and included cardiac disease, hypertension, diabetes, other pulmonary disease, active tuberculosis, previous tuberculosis, asthma, kidney disease, liver disease, neurologic disorder, asplenia, malignant neoplasm, and current smoking.
Severe disease at admission is a composite variable for disease status at admission. Severe COVID-19 was defined as 1 or more of the following conditions: oxygen saturation below 90%, respiratory rate greater than 30 breaths/min, and need for oxygen therapy. All other patients were deemed to have mild to moderate COVID-19.
Deaths indicate the mortality status of patients in the hospital (does not include deaths outside the hospital).
Vaccinated indicates 1 or more COVID-19 vaccine doses at admission. Vaccines available in Zambia during this period were Ad26.COV2.S (Janssen), mRNA-127 (Moderna), BNT162b2 (Pfizer-BioNTech), and BBIBP-CorV (Sinopharm).
Risk Factors for In-Hospital Mortality
In the fully adjusted model, admission during wave 2 had significantly lower odds of in-hospital death (compared with wave 4) (adjusted odds ratio [aOR], 0.58; 95% CI, 0.42-0.80), and admission during wave 3 had higher odds of in-hospital death (compared with wave 4) (aOR, 1.15; 95% CI, 0.85-1.55), although the latter association was not significant (Table 2). The fully adjusted model also indicated that patients across all waves who were male (aOR, 1.64; 95% CI, 1.34-2.02), were 60 years or older (aOR, 3.55; 95% CI, 2.34-5.52), had comorbidities (1-2 comorbidities: aOR, 1.52; 95% CI, 1.19-1.94; ≥3 comorbidities: aOR, 2.27; 95% CI, 1.65-3.14), had severe COVID-19 at admission (aOR, 7.20; 95% CI, 5.24-10.07), or had HIV infection (aOR, 1.39; 95% CI, 1.07-1.79) had significantly higher odds of in-hospital mortality compared with their respective reference categories.
Table 2. Risk Factors and Association With In-Hospital Death.
| Risk factor | aOR (95% CI) | |
|---|---|---|
| Model adjusted for treatment center only | Fully adjusted modela | |
| Admission by COVID-19 wave | ||
| Wave 1 | 0.96 (0.70-1.31) | 0.69 (0.47-1.00) |
| Wave 2 | 1.60 (1.25-2.04) | 0.58 (0.42-0.80) |
| Wave 3 | 3.20 (2.55-4.01) | 1.15 (0.85-1.55) |
| Wave 4 | 1 [Reference] | 1 [Reference] |
| Sex | ||
| Male | 1.75 (1.50-2.06) | 1.64 (1.34-2.02) |
| Female | 1 [Reference] | 1 [Reference] |
| Age group, y | ||
| <30 | 1 [Reference] | 1 [Reference] |
| 30-39 | 1.72 (1.13-2.66) | 1.19 (0.72-2.00) |
| 40-49 | 3.12 (2.13-4.65) | 1.28 (0.79-2.10) |
| 50-59 | 4.76 (3.3-7.01) | 1.81 (1.14-2.93) |
| ≥60 | 9.67 (6.93-13.86) | 3.55 (2.34-5.52) |
| HIV | ||
| Infection | 1.11 (0.90-1.38) | 1.39 (1.07-1.79) |
| No infection | 1 [Reference] | 1 [Reference] |
| No. of self-reported comorbidities | ||
| 0 | 1 [Reference] | 1 [Reference] |
| 1-2 | 2.32 (1.94-2.78) | 1.52 (1.19-1.94) |
| ≥3 | 3.65 (2.84-4.70) | 2.27 (1.65-3.14) |
| COVID-19 at admission | ||
| Severe | 12.15 (9.40-15.97) | 7.20 (5.24-10.07) |
| Mild | 1 [Reference] | 1 [Reference] |
Abbreviation: aOR, adjusted odds ratio.
Fully adjusted model includes wave (1-4), sex (male or female), age (<30, 30-39, 40-49, 50-59, or ≥60 years), comorbidity burden (0, 1-2, or ≥3), disease status at admission (mild or severe), COVID-19 vaccination status (vaccinated or not vaccinated), and COVID-19 treatment center (random-effects term).
COVID-19 Treatment Center Admissions Dynamics During Waves
Inspection of trends across all 4 waves indicated that increased proportions of patients at high risk for poor COVID-19 outcomes (ie, ≥60 years of age and/or with severe COVID-19 at admission) were admitted during segments that fell in the middle or, in some cases, at the end of waves vs at the beginning (Figure 2). Indeed, regression modeling that used combined data indicated that patients admitted during weeks 5 to 9 and weeks 10 to 13 had significantly higher odds of being 60 years or older (aOR, 2.09 [95% CI, 1.79-2.45]) at weeks 5-9 and 2.12 [95% CI, 1.72-2.61] at weeks 10-13) or having severe COVID-19 at admission (aOR, 2.49 [95% CI, 2.14-2.90] at weeks 5-9 and 2.90 [95% CI, 2.34-3.61] at weeks 10-13) than patients admitted during the first 4 weeks of a wave (Table 3). This was also true in the wave-specific models for waves 1, 2, and 3 and for weeks 5 through 9 (vs weeks 1 through 4) during wave 4 (Table 3).
Figure 2. Proportion of Patients Admitted During 4-Week Segments Within Waves by Age and COVID-19 Status at Admission .

Table 3. Demographic and Clinical Characteristics and Association With Admission Timing During Waves.
| Timing of patient admission | Age ≥60 y | Severe COVID-19 at admission | |||
|---|---|---|---|---|---|
| No. (%) of patients | aOR (95% CI) | No. (%) of patients | aOR (95% CI) | ||
| Combined model (includes patients from all 4 waves)a | |||||
| Weeks 1-4 | 380/1459 (26.0) | 1 [Reference] | 669/1428 (46.8) | 1 [Reference] | |
| Weeks 5-9 | 694/1646 (42.2) | 2.09 (1.79-2.45) | 1128/1632 (69.2) | 2.49 (2.14-2.90) | |
| Weeks 10-13 | 239/573 (41.7) | 2.12 (1.72-2.61) | 413/567 (72.8) | 2.90 (2.34-3.61) | |
| Weeks 14-17 | 53/168 (31.5) | 1.36 (0.95-1.92) | 137/168 (81.5) | 5.04 (3.38-7.76) | |
| Wave-specific modelsa | |||||
| Wave 1 | |||||
| Weeks 1-4 | 15/89 (16.9) | 1 [Reference] | 32/88 (36.4) | 1 [Reference] | |
| Weeks 5-9 | 60/213 (28.2) | 1.88 (1.02-3.64) | 108/213 (50.7) | 1.92 (1.15-3.25) | |
| Weeks 10-13 | 56/182 (30.8) | 2.13 (1.15-4.16) | 109/182 (59.9) | 2.78 (1.65-4.80) | |
| Weeks 14-17 | 19/74 (25.7) | 1.66 (0.78-3.60) | 54/74 (73.0) | 5.04 (2.59-10.1) | |
| Wave 2 | |||||
| Weeks 1-4 | 60/198 (30.3) | 1 [Reference] | 141/209 (67.5) | 1 [Reference] | |
| Weeks 5-9 | 217/523 (41.5) | 1.63 (1.15-2.35) | 406/526 (77.2) | 1.64 (1.11-2.42) | |
| Weeks 10-13 | 113/244 (46.3) | 2.01 (1.36-3.02) | 197/244 (80.7) | 2.03 (1.28-3.26) | |
| Weeks 14-17 | 19/65 (29.2) | 1.02 (0.54-1.89) | 58/66 (87.9) | 3.49 (1.55-8.97) | |
| Wave 3 | |||||
| Weeks 1-4 | 172/473 (36.4) | 1 [Reference] | 293/446 (65.7) | 1 [Reference] | |
| Weeks 5-9 | 301/612 (49.2) | 1.55 (1.20-1.99) | 477/601 (79.4) | 1.89 (1.41-2.54) | |
| Weeks 10-13 | 69/135 (51.1) | 1.73 (1.16-2.58) | 101/130 (77.7) | 1.74 (1.08-2.87) | |
| Weeks 14-17 | 15/29 (51.7) | 1.58 (0.73-3.43) | 25/28 (89.3) | 2.96 (0.97-12.91) | |
| Wave 4 | |||||
| Weeks 1-4 | 133/699 (19.0) | 1 [Reference] | 203/687 (29.5) | 1 [Reference] | |
| Weeks 5-9 | 116/298 (38.9) | 2.71 (2.00-3.76) | 137/291 (47.1) | 2.28 (1.70-3.07) | |
| Weeks 10-13 | 1/12 (8.3) | 0.39 (0.02-2.09) | 6/11 (54.5) | 3.99 (1.11-15.14) | |
Abbreviation: aOR, adjusted odds ratio.
Model adjusted for COVID-19 treatment center (random-effects term).
Discussion
Demographic profiles, clinical characteristics, and outcomes of patients admitted to COVID-19 treatment centers varied across 4 distinct COVID-19 waves in Zambia. Within waves, we observed a consistent pattern in which the proportion of patients at high risk for poor COVID-19 outcomes increased as waves progressed. This finding was likely indicative of admission prioritization necessitated by a combination of surges in demand for health services and Zambia’s limited health system capacity. These findings are among the first to explore this aspect of the COVID-19 epidemic and support the urgent need to expand health system capacity and improve health system resiliency in Zambia and in other countries with resource-limited health systems.
As reported elsewhere,6,15,26,27 patients admitted to COVID-19 treatment centers during wave 4, when the SARS-CoV-2 Omicron variant was circulating in Zambia, were younger, less likely to have comorbidities, and less likely to have severe COVID-19 at admission. These findings appear to be consistent with observational data that show reduced risk of severe disease with Omicron infection,15,26,27 although the inclusion of patients with incidental COVID-19 infections likely also affected the findings.26 It remains unclear whether the reduced risk of severe disease with Omicron infection reflects partial immunity from vaccination and/or prior infection or whether it is associated with reduced pathogenicity of the Omicron variant.28,29
Beyond wave of admission, other risk factors associated with in-hospital death at COVID-19 treatment centers in Zambia were consistent with previously reported data.30,31 Our finding that HIV infection was significantly associated with in-hospital death is particularly relevant for Zambia, which has an HIV prevalence of 11.1% among persons aged 15 to 49 years,32 as well as other countries in the sub-Saharan region of Africa, which has the world’s highest burden of persons living with HIV.33 Factors that drive this association could be related to poorly controlled HIV infection,16 resulting in immunosuppression and opportunistic infections, as well as residual confounding related to higher risk for noncommunicable diseases in persons living with HIV.34,35
Within-wave data indicating that the proportion of high-risk patient admissions increased during waves suggest that there was prioritization of admissions during periods of surging demand for health services. The apparent prioritization, which was likely necessitated by limited capacity at Zambia’s COVID-19 treatment centers, likely had a direct effect on lower-risk patients seeking COVID-19 treatment center admission. Those lower-risk patients may have been admitted during periods of baseline demand but, because of prioritization, were likely not admitted during periods of surging demand. Although the health outcomes of these patients are unknown, without the care provided in COVID-19 treatment centers, it is possible that they experienced high levels of morbidity and even mortality. Indeed, reports noted that increases in community deaths and all-cause mortality aligned with COVID-19 waves in Zambia.36,37
Addressing health system capacity limitations and implementing practices to improve health system resiliency are critical as Zambia prepares for upcoming COVID-19 waves and future epidemics. Expansion of health system infrastructure is needed, including additional health facilities, hospital beds, ventilators, and oxygen production facilities. Added investments in human resources are similarly needed for the country to develop a larger and better-trained workforce capable of responding to the needs presented by epidemics such as COVID-19. Use of virtual platforms to conduct trainings for health workers is one approach that is already in use in Zambia38 but could benefit from additional resources and wider adoption. Additional practices can also be implemented to improve health system resiliency as it relates to COVID-19. These practices include continuing to implement infection prevention and control practices, using home-based care in lieu of unnecessary hospitalizations, establishing and expanding access for targeted antivirals, and continuing to expand SARS-CoV-2 vaccination. Although the study described in this article was conducted in Zambia, it is likely that resource-limited health systems in other countries experienced challenges when faced with surging demand for health services during COVID-19 waves. Understanding those challenges and the country-specific measures needed to address them will be critical as countries work to develop higher-capacity and more resilient health systems.
Limitations
The findings of this study are subject to at least 6 limitations. First, we used GISAID to correlate SARS-CoV-2 variants with specific waves rather than sequencing specimens from patients in the study. Second, reliable data were not available on national COVID-19–related hospitalization numbers or COVID-19 hospitalizations by facility, which limits our understanding of the reach and generalizability of this study and prevents us from reporting changes in hospitalization rates across waves. Third, this study was performed in hospitalized patients and thus subject to collider bias,39 which might limit the generalizability of these findings beyond hospitalized patients. Fourth, even though we controlled for available covariates, confounding may still be present in our model that assessed risk factors for in-hospital mortality. Fifth, it is possible that the findings from our within-wave analyses were influenced by the use of 4-week segments or reflect the timing of COVID-19 transmission dynamics (eg, spread of infection among specific groups at specific time points during waves) rather than prioritization of treatment center admission toward high-risk patients. Sixth, as with many studies conducted during emergency responses, data completeness was a limitation because staff who were responsible for data collection were also responding to other urgent demands at the COVID-19 treatment centers.
Conclusions
Although the changes in epidemiologic data across waves described in this cohort study largely reflect those reported elsewhere, within-wave analyses revealed a pattern in which surges in demand for health services during COVID-19 waves in Zambia aligned with a prioritization of treatment center admissions toward higher-risk patients. This pattern, which was likely driven by the limited capacity of Zambia’s health system, underscores the need to expand health system capacity and strengthen health system resiliency in Zambia and other countries to prepare for future epidemics.
Data Sharing Statement
References
- 1.Jalkanen P, Kolehmainen P, Häkkinen HK, et al. COVID-19 mRNA vaccine induced antibody responses against three SARS-CoV-2 variants. Nat Commun. 2021;12(1):3991. doi: 10.1038/s41467-021-24285-4 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 2.Levin EG, Lustig Y, Cohen C, et al. Waning immune humoral response to BNT162b2 COVID-19 vaccine over 6 months. N Engl J Med. 2021;385(24):e84. doi: 10.1056/NEJMoa2114583 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 3.D’Amico F, Marmiere M, Righetti B, et al. COVID-19 seasonality in temperate countries. Environ Res. 2022;206:112614. doi: 10.1016/j.envres.2021.112614 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 4.Han Y, Xie Z, Guo Y, Wang B. Modeling of suppression and mitigation interventions in the COVID-19 epidemics. BMC Public Health. 2021;21(1):723. doi: 10.1186/s12889-021-10663-6 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 5.Carter RJ, Rose DA, Sabo RT, Clayton J, Steinberg J, Anderson M; CDC COVID-19 Response Team . Widespread severe acute respiratory syndrome coronavirus 2 transmission among attendees at a large motorcycle rally and their contacts, 30 US jurisdictions, August-September, 2020. Clin Infect Dis. 2021;73(suppl 1):S106-S109. doi: 10.1093/cid/ciab321 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 6.Nyberg T, Ferguson NM, Nash SG, et al. ; COVID-19 Genomics UK (COG-UK) consortium . Comparative analysis of the risks of hospitalisation and death associated with SARS-CoV-2 omicron (B.1.1.529) and delta (B.1.617.2) variants in England: a cohort study. Lancet. 2022;399(10332):1303-1312. doi: 10.1016/S0140-6736(22)00462-7 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 7.Nyberg T, Twohig KA, Harris RJ, et al. Risk of hospital admission for patients with SARS-CoV-2 variant B.1.1.7: cohort analysis. BMJ. 2021;373(1412):n1412. doi: 10.1136/bmj.n1412 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 8.Sheikh A, McMenamin J, Taylor B, Robertson C; Public Health Scotland and the EAVE II Collaborators . SARS-CoV-2 Delta VOC in Scotland: demographics, risk of hospital admission, and vaccine effectiveness. Lancet. 2021;397(10293):2461-2462. doi: 10.1016/S0140-6736(21)01358-1 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 9.Jassat W, Mudara C, Ozougwu L, et al. ; DATCOV author group . Difference in mortality among individuals admitted to hospital with COVID-19 during the first and second waves in South Africa: a cohort study. Lancet Glob Health. 2021;9(9):e1216-e1225. doi: 10.1016/S2214-109X(21)00289-8 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 10.Sabino EC, Buss LF, Carvalho MPS, et al. Resurgence of COVID-19 in Manaus, Brazil, despite high seroprevalence. Lancet. 2021;397(10273):452-455. doi: 10.1016/S0140-6736(21)00183-5 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 11.Tang JW, Tambyah PA, Hui DS. Emergence of a new SARS-CoV-2 variant in the UK. J Infect. 2021;82(4):e27-e28. doi: 10.1016/j.jinf.2020.12.024 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 12.Butt AA, Dargham SR, Chemaitelly H, et al. Severity of illness in persons infected with the SARS-CoV-2 Delta variant vs Beta variant in Qatar. JAMA Intern Med. 2022;182(2):197-205. doi: 10.1001/jamainternmed.2021.7949 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 13.Twohig KA, Nyberg T, Zaidi A, et al. ; COVID-19 Genomics UK (COG-UK) consortium . Hospital admission and emergency care attendance risk for SARS-CoV-2 delta (B.1.617.2) compared with alpha (B.1.1.7) variants of concern: a cohort study. Lancet Infect Dis. 2022;22(1):35-42. doi: 10.1016/S1473-3099(21)00475-8 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 14.Ong SWX, Chiew CJ, Ang LW, et al. Clinical and virological features of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants of concern: a retrospective cohort study comparing B.1.1.7 (Alpha), B.1.351 (Beta), and B.1.617.2 (Delta). Clin Infect Dis. 2022;75(1):e1128-e1136. doi: 10.1093/cid/ciab721 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 15.Maslo C, Friedland R, Toubkin M, Laubscher A, Akaloo T, Kama B. Characteristics and outcomes of hospitalized patients in South Africa during the COVID-19 Omicron wave compared with previous waves. JAMA. 2022;327(6):583-584. doi: 10.1001/jama.2021.24868 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 16.Chanda D, Minchella PA, Kampamba D, et al. COVID-19 severity and COVID-19–associated deaths among hospitalized patients with HIV infection—Zambia, March-December 2020. MMWR Morb Mortal Wkly Rep. 2021;70(22):807-810. doi: 10.15585/mmwr.mm7022a2 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 17.US National Center for Immunization and Respiratory Division of Viral Diseases. Interim Clinical Guidance for Management of Patients with Coronavirus Disease 2019 (COVID-19). Centers for Disease Control and Prevention; 2020. Accessed November 4, 2022. https://stacks.cdc.gov/view/cdc/89980
- 18.World Health Organization. The WHO Global Clinical Platform for COVID-19. Accessed November 4, 2022. https://www.who.int/teams/health-care-readiness-clinical-unit/covid-19/data-platform
- 19.Harris PA, Taylor R, Minor BL, et al. ; REDCap Consortium . The REDCap consortium: building an international community of software platform partners. J Biomed Inform. 2019;95:103208. doi: 10.1016/j.jbi.2019.103208 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 20.Harris PA, Taylor R, Thielke R, Payne J, Gonzalez N, Conde JG. Research electronic data capture (REDCap)–a metadata-driven methodology and workflow process for providing translational research informatics support. J Biomed Inform. 2009;42(2):377-381. doi: 10.1016/j.jbi.2008.08.010 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 21.World Health Organization. COVID-19 Clinical Management Living Guidance. World Health Organization; 2021. Accessed November 4, 2022. https://www.who.int/publications/i/item/WHO-2019-nCoV-clinical-2021-2
- 22.Facebook. Accessed November 4, 2022. https://www.facebook.com/ZMPublicHealth
- 23.Salyer SJ, Maeda J, Sembuche S, et al. The first and second waves of the COVID-19 pandemic in Africa: a cross-sectional study. Lancet. 2021;397(10281):1265-1275. doi: 10.1016/S0140-6736(21)00632-2 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 24.GISAID . Tracking of Variants. Accessed November 4, 2022. https://www.gisaid.org/hcov19-variants/
- 25.Mathieu E, Ritchie H, Ortiz-Ospina E, et al. A global database of COVID-19 vaccinations. Nat Hum Behav. 2021;5(7):947-953. doi: 10.1038/s41562-021-01122-8 [DOI] [PubMed] [Google Scholar]
- 26.Abdullah F, Myers J, Basu D, et al. Decreased severity of disease during the first global omicron variant COVID-19 outbreak in a large hospital in Tshwane, South Africa. Int J Infect Dis. 2022;116:38-42. doi: 10.1016/j.ijid.2021.12.357 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 27.Wolter N, Jassat W, Walaza S, et al. Early assessment of the clinical severity of the SARS-CoV-2 omicron variant in South Africa: a data linkage study. Lancet. 2022;399(10323):437-446. doi: 10.1016/S0140-6736(22)00017-4 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 28.McMahan K, Giffin V, Tostanoski LH, et al. Reduced pathogenicity of the SARS-CoV-2 Omicron variant in hamsters. Clin Transl Rep . 2022;3(4):262-268. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 29.Bentley EG, Kirby A, Sharma P, et al. SARS-CoV-2 Omicron-B.1.1.529 Variant leads to less severe disease than Pango B and Delta variants strains in a mouse model of severe COVID-19. bioRxiv. Preprint posted online December 30, 2021. doi: 10.1101/2021.12.26.474085 [DOI]
- 30.Jassat W, Cohen C, Tempia S, et al. ; DATCOV author group . Risk factors for COVID-19-related in-hospital mortality in a high HIV and tuberculosis prevalence setting in South Africa: a cohort study. Lancet HIV. 2021;8(9):e554-e567. doi: 10.1016/S2352-3018(21)00151-X [DOI] [PMC free article] [PubMed] [Google Scholar]
- 31.Western Cape Department of Health in collaboration with the National Institute for Communicable Diseases, South Africa . Risk factors for coronavirus disease 2019 (COVID-19) death in a population cohort study from the Western Cape Province, South Africa. Clin Infect Dis. 2021;73(7):e2005-e2015. doi: 10.1093/cid/ciaa1198 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 32.Zambia Statistics Agency, Ministry of Health (MOH) Zambia, and ICF. Zambia Demographic and Health Survey 2018. Zambia Statistics Agency, Ministry of Health, and ICF; 2019. Accessed November 4, 2022. https://dhsprogram.com/pubs/pdf/FR361/FR361.pdf
- 33.UNAIDS . AIDSinfo: Global Data on HIV Epidemiology and Response. Accessed November 4, 2022. https://aidsinfo.unaids.org/
- 34.Shah ASV, Stelzle D, Lee KK, et al. Global burden of atherosclerotic cardiovascular disease in people living with HIV: systematic review and meta-analysis. Circulation. 2018;138(11):1100-1112. doi: 10.1161/CIRCULATIONAHA.117.033369 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 35.Patel P, Rose CE, Collins PY, et al. ; NIH HIV/NCD Project Disease Condition Technical Operating Group . Noncommunicable diseases among HIV-infected persons in low-income and middle-income countries: a systematic review and meta-analysis. AIDS. 2018;32(suppl 1):S5-S20. doi: 10.1097/QAD.0000000000001888 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 36.Mwananyanda L, Gill CJ, MacLeod W, et al. COVID-19 deaths in Africa: prospective systematic postmortem surveillance study. BMJ. 2021;372(334):n334. doi: 10.1136/bmj.n334 [DOI] [PMC free article] [PubMed] [Google Scholar]
- 37.Hamukale AHJ, Sinyange N, Fwoloshi S, et al. SARS-CoV-2 Mortality Surveillance among Community Deaths Brought to University Teaching Hospital Mortuary in Lusaka, Zambia, 2020. medRxiv. Preprint posted online November 15, 2021. doi: 10.1101/2021.11.14.21266330 [DOI]
- 38.Boyd MA, Fwoloshi S, Minchella PA, et al. A national HIV clinical mentorship program: enabling Zambia to accelerate control of the HIV epidemic. PLoS Global Public Health. 2022;2(2):e0000074. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 39.Griffith GJ, Morris TT, Tudball MJ, et al. Collider bias undermines our understanding of COVID-19 disease risk and severity. Nat Commun. 2020;11(1):5749. doi: 10.1038/s41467-020-19478-2 [DOI] [PMC free article] [PubMed] [Google Scholar]
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