Table 2:
Comparison of the present study with previous quality metrics of goose genome assembly
| Genomic features | Lion-head goose | Zhedong white goose | Sichuan white goose | Tianfu goose |
|---|---|---|---|---|
| Estimate of genome size (bp) | 1,278,045,811 | 1,208,661,181 | 1,198,802,839 | 1,277,099,016 |
| Total length of contigs (bp) | 1,268,074,106 | 1,086,838,604 | 1,100,859,441 | 1,113,842,245 |
| Total length of scaffolds (bp) | 1,277,289,474 | 1,122,178,121 | 1,130,663,797 | 1,113,913,845 |
| Number of contigs | 1,318 | 60,979 | 53,336 | 2,771 |
| Number of scaffolds | 1,266 | 1,050 | 1,837 | 2,055 |
| Contig N50 (bp) | 21,589,146 | 27,602 | 35,032 | 1,849,874 |
| Scaffold N50 (bp) | 27,064,542 | 5,202,740 | 5,103,766 | 33,116,532 |
| Longest contig (bp) | 91,420,268 | 201,281 | 399,111 | 10,766,871 |
| Longest scaffold (bp) | 98,160,899 | 24,051,356 | 20,207,557 | 70,896,740 |
| GC content | 42.39% | 38.00% | 41.68% | 42.15% |
| No. of predicted protein-coding genes | 21,010 | 16,150 | 16,288 | 17,568 |
| Percentage of repeat sequences | 12.25% | 6.33% | 6.90% | 8.67% |