Skip to main content
. Author manuscript; available in PMC: 2023 Nov 16.
Published in final edited form as: Nature. 2022 Nov 16;611(7937):818–826. doi: 10.1038/s41586-022-05432-3

Table 1.

Summary of TCR CDR3, V and J genes for TCRs used in antigen discovery experiments.

TCR ID TCR
Source
β CDR3 TRBV TRBJ α CDR3 TRAV TRAJ Antigen
A Murine single cell sequencing CSAAWGGSAETLYF TRBV1 TRBJ2-3 CAVSDRGSALGRLHF TRAV7-3*04 TRAJ18 MYH6191-198 (VIQYFASI)
1 Murine single cell sequencing CASSPGQGAYAEQFF TRBV12-2 TRBJ2-1 CAVSSGYGSSGNKLIF TRAV7-5 TRAJ32 Unknown (Not in α-myosin, SBK2, ANP, BNP)
2 Murine single cell sequencing CASKTGYNYAEQFF TRBV19 TRBJ2-1 CALNTGYQNFYF TRAV4-4-DV10 TRAJ49 Unknown (Not in α-myosin, SBK2, ANP, BNP)
3 Murine single cell sequencing CASGGLGGPSQNTLYF TRBV12-2 TRBJ2-4 CALERSTGNYKYVF TRAV13-1 TRAJ40 Unknown (Not in α-myosin, SBK2, ANP, BNP)
4 Murine single cell sequencing CASSDAGYAEQFF TRBV13-3 TRBJ2-1 CALGDSNYQLIW TRAV6-6 TRAJ33 Unknown (Not in α-myosin, SBK2, ANP, BNP)
B Adoptive transfer (Donor, Rec1,3,4) CASSLRRGEQYF TRBV15 TRBJ2-7 CALERASGSWQLIF TRAV13-1 TRAJ22 MYH6191-198 (VIQYFASI)
C Adoptive Transfer (Rec2) CASSLGGTVQDTQYF TRBV12-2 TRBJ2-5 CALGDRNNAGAKLTF TRAV6D-6 TRAJ39 MYH6418-425 (VQQVYYSI)
TCR_pt1 Pt 1 exPBMC (single cell sequencing) CASSPYQSSGANVLTF TRBV9 TRBJ2-6 CALSDRYGGATNKLIF TRAV19 TRAJ32 MYH6443-451 (RINATLETK)