TABLE 1.
Passaged virus | Lineage: | A | B | C | D |
---|---|---|---|---|---|
HSV-SaHVgBpass | Passage # at sequencing: | Passage 20 | Passage 20 | Passage 20 | Passage 20 |
Glycoprotein mutations: | gH-H789Y a | gH-H789Y | gH-H789Y | gH-H789Y | |
gC-R228L | gC-R145W | gC-R147L b | gC-R145W | ||
gC-Y242C | |||||
gB3Apass | Passage # at sequencing: | Passage 26 | Passage 29 | Passage 29 | Passage 29 |
Glycoprotein mutations: | gH-S830N | gH-S830N | gH-G104D | gH-S830N | |
gC-L204F | gB-M742T | gB-A855V | gB-S392F | ||
gC-C286S | gC-P225L | gG-E83stop | gB-V517I | ||
gM-Y407stop | gI-K344extc | gD-P219L | |||
gC-R228W | |||||
gI-K344extc | |||||
ΔgB/gB3Apass | Passage # at sequencing: | Passage 6 | Passage 6 | Passage 6 | Passage 13 |
Glycoprotein mutations: | gH-S830N | gH-W30L | gH-L72P | gH-S830N | |
gH-T76M | gH-W835ext d | gD-Q203H | gH-W835ext d | ||
gD-Q203H | gE-V269M | ||||
gC-S459N |
The gH mutations examined in this study are shown in bold.
Mutations in italics were detected in combination with WT sequence at that position (i.e., mixed sequence). Virus stocks were not plaque purified prior to sequencing.
Cytosine insertion in gI-T341 codon resulted in a frameshift mutation at residue K344. gI-K344ext residues after P343: QIPAPVVTHTNALPDGHRRRVGARGGGWASDAPRGPHDIHPNASPVGIGPRPLAGGTT.
Adenine insertion in gH-W835 codon resulted in a frameshift mutation that extends the gH CT. Full CT of gH-W835ext: KVLRTSVPFFLETRIKGAWLRPFIRPTE.