Finding the Factors of Reduced Genetic Diversity on X Chromosomes of Macaca fascicularis: Male-Driven Evolution, Demography, and Natural Selection

Files in this data supplement:

• Supporting Information: File S1, Figures S1-S4, and Tables S1-S2 (PDF, 802 KB)
• File S1: Supplementary Document (PDF, 324 KB)
• Figure S1: Observed summary statistics for sequence data from (a) two populations (M. fascicularis) and (b) three populations (M. mulatta and M. fascicularis). (PDF, 563 KB)
• Figure S2: A demographic model of macaques (PDF, 360 KB)
• Figure S3: Distribution of X/A diversity ratio in the simulated datasets (PDF, 403 KB)
• Figure S4: Distribution of X/A diversity ratio in the simulated datasets (PDF, 374 KB)
• Table S1: Estimated demographic parameters under the three population model (PDF, 317 KB)
• Table S2: Accuracy of kernel ABC under population divergence models with constant size and expansion and bottleneck (PDF, 324 KB)