Sequence Profiling of the Saccharomyces cerevisiae Genome Permits Deconvolution of Unique and Multialigned Reads for Variant Detection

Supporting Information for Jubin et al., 2014

Files in this Data Supplement:

  • Supporting Information - Figures S1-S5, File S1, and Tables S1-S3 (PDF, 517 KB)
  • Figure S1 - M regions visualization through SGD browser (http://www.yeastgenome.org/). (PDF, 192 KB)
  • Figure S2 - Virtual HTS profile coverage of chromosome II. (PDF, 567 KB)
  • Figure S3 - Forward (F) and reverse (R) strand coverage of 50 nt-reads virtual HTS profile along the whole chromosome II. (PDF, 158 KB)
  • Figure S4 - Application of the g-deNoise filtering on the duplicated histone H4 HHF1 multi-aligned regions. (PDF, 386 KB)
  • Figure S5 - Visualization of reads mapping on the M regions of YBLWTy2-1. (PDF, 152 KB)
  • Table S1 - Functional annotation of M regions along chromosome II. (PDF, 120 KB)
  • Table S2 - Constitutive SNPs found in the U regions in the wild-type mutation accumulation lines. (PDF, 120 KB)
  • Table S3 - Acquired SNPs found in the U regions in the wild-type mutation accumulation lines. (PDF, 121 KB)
  • File S1 - Supporting data (.zip, 852 KB)