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Table 8. Abbreviations for domain descriptions

Domain name

Description

Pfam accession no.

25A_synth

2’-5’-oligoadenylate synthase N-terminal region profile

AT_hook

AT hook motif

PF02178

CSD

"Cold-shock" DNA-binding domain

PF00313

CPSFA

CPSF A subunit region

PF03178

DEAD

DEAD/DEAH box helicase

PF00270

DIM1

Mitosis protein DIM1

PF02966

DSRM

Double-stranded RNA binding motif

PF00035

EFG_C

Elongation factor G C-terminus

PF00679

EFG_IV

Elongation factor G, domain IV

PF03764

GYF

GYF Domain

PF02213

Hat

HAT (Half-A-TPR) repeat

PF02184

Helicase_C

Helicase conserved C-terminal domain

PF00271

HSP70

Hsp70 protein

PF00012

KH

K homology domain

PF00013

MIF4G

Middle domain of eukaryotic initiation factor 4G domain

PF02854

LRR

Leu-rich repeat

PF00560

Mov34

Mov34/MPN/PAD-1 family

PF01398

Myb_DNA_binding

Myb-like DNA-binding domain

PF00249

NLS_BP

Bipartite nuclear localization signal

NOP

Putative snoRNA binding domain

PF01798

Pro_isomerase

Cyclophilin type peptidyl-prolyl cistrans isomerase

PF00160

Pro-rich

Pro-rich

PWI

PWI Domain

PF01480

RNA_pol_Rpb1_R

RNA polymerase Rpb1 C-terminal repeat

PF05001

RIBOSOMAL_L7A

Ribosomal protein L7Ae/L30e/S12e/Gadd45 family

PF01248

RRM

RNA recognition motif

PF00076

RS

Arginine–serine-rich domain

SART_1

SART-1 family

PF003343

Sec63

Sec63 domain

PF02889

SKIP_SNW

SKIP/SNW domain

PF02731

TPR

TPR Domain

PF00515

Tudor

Tudor Domain

PF00567

UCH

Ubiquitin carboxyl-terminal hydrolase

PF00443

WD40

WD domain, G-beta repeat

PF00400

WW

WW domain

PF00397

ZF

Zinc Finger domain

PF04071