. Author manuscript; available in PMC: 2019 May 14.

Published in final edited form as: Nature. 2018 Nov 14;563(7732):501–507. doi: 10.1038/s41586-018-0692-z

Table 1 |.

Comparison of assembly statistics

Genome:	AaegL3	AaegL4	AaegL5	AaegL5 (NCBI)
Genome:	AaegL3	AaegL4	FALCON-Unzip	FALCON-Unzip + Hi-C + polish
Total length (non-N bp)	1,310,092,987	1,254,548,160	1,695,064,654	1,278,709,169
Contig number	36,205	37,224	3,967	2,539
Contig N50 (bp)	82,618	84,074	1,304,397	11,758,062
Contig NG50 (bp)	85,043	81,911	1,907,936	11,758,062
Scaffold number	4,757	6,206	(N/A)	2,310
Scaffold N50 (bp)	1,547,048	404,248,146^*	(N/A)	409,777,670^*
GC content (%)	38.27	38.28	38.16	38.18
Alternative	(N/A)	(N/A)	351,566,101	591,941,260
haplotypes (bp) Alternative	(N/A)	(N/A)	3,823	4,224
haplotypes (contigs)

Scaffold N50 is the length of chromosome 3, N/A: not applicable