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. 2021 Apr 30;13(4):evab040. doi: 10.1093/gbe/evab040

Corrigendum to “Comparative genomics and pan-genomics of the Myxococcaceae, including a description of five novel species: Myxococcus eversor sp. nov., Myxococcus llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogochensis sp. nov., Myxococcus vastator sp. nov., Pyxidicoccus caerfyrddinensis sp. nov. and Pyxidicoccus trucidator sp. nov.” [Genome Biol. Evol. 12(12) (2020) 2289-2302]

James Chambers 1,#, Natalie Sparks 1,#, Natashia Sydney 1, Paul G Livingstone 1,2, Alan R Cookson 1, David E Whitworth 1,
PMCID: PMC8086524  PMID: 33929503

In the species descriptions of the species Myxococcus llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogochensis sp. nov., Myxococcus vastator sp. nov., and Pyxidicoccus caerfyrddinensis sp. nov. the acronyms of the culture collections to which the type strains were deposited contained typographic errors. The corrected species descriptions are provided below:

SPECIES DESCRIPTIONS

Myxococcus llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogochensis sp. nov.

Myxococcus llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogochensis, (llan.fair.pwll.gwyn.gyll.gog.er.ych.wyrn.dro.bwllll.ant.ysil.iog.ogogoch.en'sis. N.L. masc. adj. llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogochensis, pertaining to llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogoch, reflecting its isolation from soil collected in that parish [gridref 53.22°N 4.19°W]).

Vegetative cells are Gram-negative bacilli tapering slightly at the ends, measuring 0.4-0.6 µm x 4.0-7.0 µm in electron micrographs. Colonies exhibit swarming motility and appear pale brown on VY-2 agar (w/v 0.5% dried baker’s yeast, 0.1% CaCl2.2H2O, 1.5% agar). Fruiting bodies are irregular spheroids, orange in colour. Aerobic growth was observed at 30 oC and 35 oC, and at pH 5.0-9.0. Growth was unaffected by the addition of 1-4% NaCl. Hydrolyses esculin, gelatine, p-nitrophenyl-β-D galactopyranoside and urea. Assimilates N-acetyl-glucosamine, adipate, arabinose, glucose, malate, maltose, mannitol, mannose and phenyl acetate. Cells prey with low efficiency upon Escherichia coli TOP10, Clavibacter nebraskensis DSM 7483 and Ustilago maydis. DNA GC content is 68.7 mol%. The draft genome sequence of AM401T is available from GenBank (Accession VIFM00000000). The type strain (AM401T = NBRC 114351T = NCCB 100770T) was isolated from soil collected in the parish of Llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogoch, United Kingdom [gridref 53.22°N 4.19°W].

Myxococcus vastator sp. nov.

Myxococcus vastator (vas.ta’tor L. masc. n. vastator the ravager, after its ability to devastate colonies of prey cells).

Vegetative cells are Gram-negative bacilli tapering slightly at the ends, measuring 0.6-0.7 µm x 3.0-6.0 µm in electron micrographs. Colonies exhibit swarming motility and appear pale brown on VY-2 agar (w/v 0.5 % dried baker’s yeast, 0.1% CaCl2.2H2O, 1.5 % agar). Fruiting bodies are irregular spheroids, orange in colour. Aerobic growth was observed at 30 oC, and at pH 8.0-9.0. Growth was unaffected by the addition of 1 % NaCl. Hydrolyses arginine and urea. Assimilates malate. Cells prey with low efficiency upon Escherichia coli TOP10, Clavibacter nebraskensis DSM 7483 and Ustilago maydis DSM 14603.

DNA GC content is 69.9 mol%. The draft genome sequence of AM301T is available from GenBank (Accession JAAIYB000000000). The type strain (AM301T = NCCB 100768T = NBRC 114352T) was isolated from soil collected in the parish of Llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogoch, United Kingdom [gridref 53.22°N 4.19°W].

Pyxidicoccus caerfyrddinensis sp. nov.

Pyxidicoccus caerfyrddinensis (caer.fyrdd.in.en’sis N.L. masc. adj. caerfyrddinensis from Caerfyrddin, reflecting its isolation from soil sampled near Carmarthen (the Anglicised name for Caerfyrddin), Wales [51.86°N 4.31°W]).

Vegetative cells are Gram-negative bacilli tapering slightly at the ends, measuring 0.7-0.8 µm x 3.0-8.0 µm in electron micrographs. Colonies exhibit swarming motility and appear pale brown on VY-2 agar (w/v 0.5 % dried baker’s yeast, 0.1% CaCl2.2H2O, 1.5 % agar). Fruiting bodies are irregular spheroids, orange in colour. Aerobic growth was observed at 30-40 oC, and at pH 6.0-9.0. Growth was unaffected by the addition of 1-3 % NaCl. Hydrolyses arginine, esculin, gelatine, p-nitrophenyl-β-D galactopyranoside and urea. Cells prey efficiently on Clavibacter nebraskensis DSM 7483, and with low efficiency upon Escherichia coli TOP10 and Ustilago maydis DSM 14603.

DNA GC content is 70.2 mol%. The draft genome sequence of CA032AT is available from GenBank (Accession JAAIYA000000000). The type strain (CA032AT = NCCB 100776T = NBRC 114353T) was isolated from soil collected in Carmarthen, United Kingdom [gridref 51.86°N 4.31°W].


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