Abstract
DNA hybridization was used to establish DNA sequence relationships among seven Drosophila species. Single-copy DNA was isolated from four species within the Drosophila mulleri complex, D. mojavensis, D. arizonensis, D. ritae and D. starmeri. These single-copy DNAs were used as tracers to be hybridized with each other and one additional member of the mulleri complex, D. aldrichi, a member of a closely related complex, D. hydei, and a distantly related species, D. melanogaster . Two methods have been used to determine the relatedness between these species: (1) the extent of duplex formed as measured by binding to hydroxyapatite and (2) the thermal stability of the duplexed DNA. Moderately repetitive DNA was purified from these species and used similarly to determine the divergence of this family of sequences. The rate of nucleotide substitution was estimated to be 0.2 ± 0.1% base pair change per million years for both single-copy and middle-repetitive DNAs. The size of the D. arizonensis genome, a representative of the mulleri complex, was calculated to be 2.2 x 108 base pairs from its kinetic complexity similar to that of D. hydei. The relative amounts (18%) and average reiteration frequency (100 copies) of the middle-repetitive DNA are similar for all Drosophila species studied. Finally, the data are presented in a phylogenetic tree.
Full Text
The Full Text of this article is available as a PDF (1.1 MB).
Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Angerer R. C., Davidson E. H., Britten R. J. Single copy DNA and structural gene sequence relationships among four sea urchin species. Chromosoma. 1976 Jul 8;56(3):213–226. doi: 10.1007/BF00293186. [DOI] [PubMed] [Google Scholar]
- Beverley S. M., Wilson A. C. Molecular evolution of Drosophila and higher Diptera. I. Micro-complement fixation studies of a larval hemolymph protein. J Mol Evol. 1982;18(4):251–264. doi: 10.1007/BF01734103. [DOI] [PubMed] [Google Scholar]
- Crain W. R., Eden F. C., Pearson W. R., Davidson E. H., Britten R. J. Absence of short period interspersion of repetitive and non-repetitive sequences in the DNA of Drosophila melanogaster. Chromosoma. 1976 Jul 30;56(4):309–326. doi: 10.1007/BF00292953. [DOI] [PubMed] [Google Scholar]
- Fristrom J. W., Yund M. A. Genetic programming for development in Drosophila. CRC Crit Rev Biochem. 1973 Sep;1(4):537–570. doi: 10.3109/10409237309105442. [DOI] [PubMed] [Google Scholar]
- Goldberg R. B., Galau G. A., Britten R. J., Davidson E. H. Nonrepetitive DNA sequence representation in sea urchin embryo messenger RNA. Proc Natl Acad Sci U S A. 1973 Dec;70(12):3516–3520. doi: 10.1073/pnas.70.12.3516. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hutton J. R., Wetmur J. G. Effect of chemical modification on the rate of renaturation of deoxyribonucleic acid. Deaminated and glyoxalated deoxyribonucleic acid. Biochemistry. 1973 Jan 30;12(3):558–563. doi: 10.1021/bi00727a032. [DOI] [PubMed] [Google Scholar]
- Jelinek W. R., Toomey T. P., Leinwand L., Duncan C. H., Biro P. A., Choudary P. V., Weissman S. M., Rubin C. M., Houck C. M., Deininger P. L. Ubiquitous, interspersed repeated sequences in mammalian genomes. Proc Natl Acad Sci U S A. 1980 Mar;77(3):1398–1402. doi: 10.1073/pnas.77.3.1398. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Laird C. D., McConaughy B. L., McCarthy B. J. Rate of fixation of nucleotide substitutions in evolution. Nature. 1969 Oct 11;224(5215):149–154. doi: 10.1038/224149a0. [DOI] [PubMed] [Google Scholar]
- MIYAZAWA Y., THOMAS C. A., Jr NUCLEOTIDE COMPOSITION OF SHORT SEGMENTS OF DNA MOLECULES. J Mol Biol. 1965 Feb;11:223–237. doi: 10.1016/s0022-2836(65)80053-5. [DOI] [PubMed] [Google Scholar]
- Mulder M. P., van Duijn P., Gloor H. J. The replicative organization of DNA in polytene chromosomes of Drosophila hydei. Genetica. 1968;39(3):385–428. doi: 10.1007/BF02324479. [DOI] [PubMed] [Google Scholar]
- Prager E. M., Wilson A. C. Congruency of phylogenies derived from different proteins. A molecular analysis of the phylogenetic position of cracid birds. J Mol Evol. 1976 Dec 31;9(1):45–57. doi: 10.1007/BF01796122. [DOI] [PubMed] [Google Scholar]
- Schachat F. H., Hogness D. S. Repetitive sequences in isolated Thomas circles from Drosophila melanogaster. Cold Spring Harb Symp Quant Biol. 1974;38:371–381. doi: 10.1101/sqb.1974.038.01.040. [DOI] [PubMed] [Google Scholar]
- Spradling A. C., Rubin G. M. Drosophila genome organization: conserved and dynamic aspects. Annu Rev Genet. 1981;15:219–264. doi: 10.1146/annurev.ge.15.120181.001251. [DOI] [PubMed] [Google Scholar]