Abstract
The crystal structure of a mutant calmodulin (CaM) lacking Glu-84 has been refined to R = 0.23 using data measured to 2.9-A resolution. In native CaM the central helix is fully extended, and the molecule is dumbbell shaped. In contrast, the deletion of Glu-84 causes a bend of 95 degrees in the linker region of the central helix at Ile-85. However, EF-hand domains 1 and 2 (lobe 1,2) do not touch lobe 3,4. The length, by alpha-carbon separation, of des-Glu84-CaM is 56 A; that of native CaM is 64 A. The shape of des-Glu84-CaM is similar to that of native CaM, as it is bound to the target peptide of myosin light-chain kinase. This result supports the proposal that the linker region of the central helix of CaM functions as a flexible tether.
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Selected References
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- Babu Y. S., Bugg C. E., Cook W. J. Structure of calmodulin refined at 2.2 A resolution. J Mol Biol. 1988 Nov 5;204(1):191–204. doi: 10.1016/0022-2836(88)90608-0. [DOI] [PubMed] [Google Scholar]
- Barbato G., Ikura M., Kay L. E., Pastor R. W., Bax A. Backbone dynamics of calmodulin studied by 15N relaxation using inverse detected two-dimensional NMR spectroscopy: the central helix is flexible. Biochemistry. 1992 Jun 16;31(23):5269–5278. doi: 10.1021/bi00138a005. [DOI] [PubMed] [Google Scholar]
- Heidorn D. B., Seeger P. A., Rokop S. E., Blumenthal D. K., Means A. R., Crespi H., Trewhella J. Changes in the structure of calmodulin induced by a peptide based on the calmodulin-binding domain of myosin light chain kinase. Biochemistry. 1989 Aug 8;28(16):6757–6764. doi: 10.1021/bi00442a032. [DOI] [PubMed] [Google Scholar]
- Heidorn D. B., Trewhella J. Comparison of the crystal and solution structures of calmodulin and troponin C. Biochemistry. 1988 Feb 9;27(3):909–915. doi: 10.1021/bi00403a011. [DOI] [PubMed] [Google Scholar]
- Herzberg O., James M. N. Refined crystal structure of troponin C from turkey skeletal muscle at 2.0 A resolution. J Mol Biol. 1988 Oct 5;203(3):761–779. doi: 10.1016/0022-2836(88)90208-2. [DOI] [PubMed] [Google Scholar]
- Hubbard S. R., Hodgson K. O., Doniach S. Small-angle x-ray scattering investigation of the solution structure of troponin C. J Biol Chem. 1988 Mar 25;263(9):4151–4158. [PubMed] [Google Scholar]
- Ikura M., Clore G. M., Gronenborn A. M., Zhu G., Klee C. B., Bax A. Solution structure of a calmodulin-target peptide complex by multidimensional NMR. Science. 1992 May 1;256(5057):632–638. doi: 10.1126/science.1585175. [DOI] [PubMed] [Google Scholar]
- Kataoka M., Head J. F., Persechini A., Kretsinger R. H., Engelman D. M. Small-angle X-ray scattering studies of calmodulin mutants with deletions in the linker region of the central helix indicate that the linker region retains a predominantly alpha-helical conformation. Biochemistry. 1991 Feb 5;30(5):1188–1192. doi: 10.1021/bi00219a004. [DOI] [PubMed] [Google Scholar]
- Kataoka M., Head J. F., Seaton B. A., Engelman D. M. Melittin binding causes a large calcium-dependent conformational change in calmodulin. Proc Natl Acad Sci U S A. 1989 Sep;86(18):6944–6948. doi: 10.1073/pnas.86.18.6944. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kataoka M., Head J. F., Vorherr T., Krebs J., Carafoli E. Small-angle X-ray scattering study of calmodulin bound to two peptides corresponding to parts of the calmodulin-binding domain of the plasma membrane Ca2+ pump. Biochemistry. 1991 Jun 25;30(25):6247–6251. doi: 10.1021/bi00239a024. [DOI] [PubMed] [Google Scholar]
- Kretsinger R. H., Barry C. D. The predicted structure of the calcium-binding component of troponin. Biochim Biophys Acta. 1975 Sep 9;405(1):40–52. doi: 10.1016/0005-2795(75)90312-8. [DOI] [PubMed] [Google Scholar]
- Manalan A. S., Klee C. B. Calmodulin. Adv Cyclic Nucleotide Protein Phosphorylation Res. 1984;18:227–278. [PubMed] [Google Scholar]
- Matsushima N., Izumi Y., Matsuo T., Yoshino H., Ueki T., Miyake Y. Binding of both Ca2+ and mastoparan to calmodulin induces a large change in the tertiary structure. J Biochem. 1989 Jun;105(6):883–887. doi: 10.1093/oxfordjournals.jbchem.a122773. [DOI] [PubMed] [Google Scholar]
- Meador W. E., Means A. R., Quiocho F. A. Target enzyme recognition by calmodulin: 2.4 A structure of a calmodulin-peptide complex. Science. 1992 Aug 28;257(5074):1251–1255. doi: 10.1126/science.1519061. [DOI] [PubMed] [Google Scholar]
- Nakayama S., Moncrief N. D., Kretsinger R. H. Evolution of EF-hand calcium-modulated proteins. II. Domains of several subfamilies have diverse evolutionary histories. J Mol Evol. 1992 May;34(5):416–448. doi: 10.1007/BF00162998. [DOI] [PubMed] [Google Scholar]
- Persechini A., Blumenthal D. K., Jarrett H. W., Klee C. B., Hardy D. O., Kretsinger R. H. The effects of deletions in the central helix of calmodulin on enzyme activation and peptide binding. J Biol Chem. 1989 May 15;264(14):8052–8058. [PubMed] [Google Scholar]
- Persechini A., Kretsinger R. H. The central helix of calmodulin functions as a flexible tether. J Biol Chem. 1988 Sep 5;263(25):12175–12178. [PubMed] [Google Scholar]
- Rao S. T., Wu S., Satyshur K. A., Ling K. Y., Kung C., Sundaralingam M. Structure of Paramecium tetraurelia calmodulin at 1.8 A resolution. Protein Sci. 1993 Mar;2(3):436–447. doi: 10.1002/pro.5560020316. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Satyshur K. A., Rao S. T., Pyzalska D., Drendel W., Greaser M., Sundaralingam M. Refined structure of chicken skeletal muscle troponin C in the two-calcium state at 2-A resolution. J Biol Chem. 1988 Feb 5;263(4):1628–1647. [PubMed] [Google Scholar]
- Taylor D. A., Sack J. S., Maune J. F., Beckingham K., Quiocho F. A. Structure of a recombinant calmodulin from Drosophila melanogaster refined at 2.2-A resolution. J Biol Chem. 1991 Nov 15;266(32):21375–21380. doi: 10.2210/pdb4cln/pdb. [DOI] [PubMed] [Google Scholar]
- Trewhella J., Blumenthal D. K., Rokop S. E., Seeger P. A. Small-angle scattering studies show distinct conformations of calmodulin in its complexes with two peptides based on the regulatory domain of the catalytic subunit of phosphorylase kinase. Biochemistry. 1990 Oct 9;29(40):9316–9324. doi: 10.1021/bi00492a003. [DOI] [PubMed] [Google Scholar]
- Vijay-Kumar S., Cook W. J. Structure of a sarcoplasmic calcium-binding protein from Nereis diversicolor refined at 2.0 A resolution. J Mol Biol. 1992 Mar 20;224(2):413–426. doi: 10.1016/0022-2836(92)91004-9. [DOI] [PubMed] [Google Scholar]