Abstract
Diabetes mellitus (DM) increases the incidence of age-related cataracts. Currently, no medication is approved or known to delay clinical cataract progression. Using a novel approach based on AI, we searched for drugs with potential cataract surgery-suppressing effects. We developed a drug discovery strategy that combines AI-based potential candidate prediction among 2650 Food and Drug Administration (FDA)-approved drugs with clinical corroboration leveraging multicenter electronic health records (EHRs) of approximately 800,000 cataract patients from the TriNetX platform. Among the top-10 AI-predicted repurposed candidate drugs, we identified three DM diagnostic ICD code groups, such as cataract patients with type 1 diabetes mellitus (T1DM), type 2 diabetes mellitus (T2DM), or hyperglycemia, and conducted retrospective cohort analyses to evaluate the efficacy of these candidate drugs in reducing the risk of cataract extraction. Aspirin, melatonin, and ibuprofen were associated with a reduced 5-, 10-, and 20-year cataract extraction risk in all types of diabetes. Acetylcysteine was associated with a reduced 5-, 10-, and 20-year cataract extraction risk in T2DM and hyperglycemia but not in T1DM patient groups. The suppressive effects of aspirin, acetylcysteine, and ibuprofen waned over time, while those of melatonin became stronger in both genders. Thus, the four repositioned drugs have the potential to delay cataract progression in both genders. All four drugs share the ability to directly or indirectly inhibit cyclooxygenase-2 (COX-2), an enzyme that is increased by multiple cataractogenic stimuli.
Keywords: aging, cataract surgery, pharmacological prevention, aspirin, acetylcysteine, ibuprofen, melatonin
Introduction
Cataract, or opacification of the lens of the eye, is a multifactorial ophthalmologic disease (Shichi, 2004). It is the leading cause of blindness in middle- and low-income countries, accounting for half of all incidences of blindness globally (Ang and Afshari, 2021). According to the National Eye Institute (NEI), cataracts affect an estimated 24.4 million U.S. citizens aged 40 or older. In addition, approximately half of all U.S. citizens aged 65 and older have suffered from cataracts (Desai et al., 1995). Diabetes mellitus (DM) is a risk factor for cataract development, as increased blood sugar levels result in cellular and biochemical damage and eventually opacification of the lens (Drinkwater et al., 2019). While the onset of cataracts in diabetes can be delayed by lifestyle modifications such as dietary changes and smoking cessation, no more than 20% of cataract surgeries are performed on DM patients (Bixler, 2019), suggesting that not all patients partake in such preventative measures. Prevention is crucial to the public health burden of cataracts, and the NEI estimates that a 50% reduction in the cataract progression rate would decrease cataract extraction by 45% (Seddon et al., 1995).
Currently, there are no Food and Drug Administration (FDA)-approved therapies that can prevent, delay, or cure cataracts in humans. The traditional drug discovery process for medication development is lengthy and costly (Mullard, 2014). Drug repurposing is a technique in which already approved drugs are used to treat complex diseases for which they were not initially indicated (Pushpakom et al., 2019). Numerous computational approaches have been developed to identify new treatments for various diseases (Park, 2019; Platania et al., 2020; Gesualdo et al., 2021). Recently, researchers have been increasingly using artificial intelligence (AI)-based algorithms that can analyze large amounts of chemical, genetic, genomic, and biological data to further facilitate the drug repurposing process (Levin et al., 2020; Pan et al., 2022a). Here, we developed a drug repurposing strategy (Figure 1) combining an AI-based drug discovery system with clinical corroboration using a large database of patient electronic health records (EHRs) to identify FDA-approved drug candidates for reducing the risk of cataract extraction in real-world patients with diabetes.
Materials and methods
Trial drug selection using the AI-based drug discovery system
We performed drug repurposing utilizing our AI-based drug discovery system termed KG-Predict, which we have recently developed (Gao et al., 2022; Gao et al., 2023) to identify potential drug candidates for DM cataracts. We first constructed the knowledge graph by extracting multiple types of interactions between drugs, genes, diseases, and phenotypic annotations from various public biomedical datasets that offered high-quality structured information (Figure 1A). Six types of phenome-level associations were collected from Gene Ontology Annotation (GOA) (Ashburner et al., 2000), Genotype-Tissue Expression (GTEx) (GTEx Consortium, 2015), Mouse Genome Informatics (MGI) (Eppig et al., 2017), and Phenomebrowser databases (OntoSIML, 2021). We also obtained two types of genome-level associations from MGI and DrugBank (Wishart et al., 2008). In our previous study, we constructed TreatKB (Xu and Wang, 2013), which included drug-disease treatment relationships mined by NLP techniques from records of patients in the FDA Adverse Event Reporting System (FAERS), FDA drug labels, MEDLINE abstracts, and clinical trial studies. To merge all interactions from different datasets into a knowledge graph, we mapped each entity to an identifier using standard biomedical terminologies. The standardized knowledge graph contained 72,360 nodes, 1,313,075 edges, seven node types, and nine semantic relationships. The statistics of entities and relations are illustrated in Supplementary Table S1.
Candidate drugs were prioritized by KG-Predict (Gao et al., 2022; Gao et al., 2023). Figure 1B provides an overview of the KG-Predict model. The KG-Predict contains an embedding module and a predicting module. The embedding module took the knowledge graph as input and learned low-dimensional embeddings of entities and relationships. Once learned, the predicting module concatenated the embeddings of entities and relations to make link predictions. For each triple (e.g., drug–target–gene), the predicting module could be represented as a ranking function that generated higher scores for true triples and lower scores for false triples. We performed target-based drug repositioning toward DM cataracts. We first obtained 12 DM cataract-associated genes from the published literature (Hashim and Zarina, 2012; Lin et al., 2013; Frankfater et al., 2020; Wu et al., 2020) based on a PubMed search under “cataract” and “diabetes” that included CCDC102A, CRYAA, KIAA1671, PPARD, AKR1B1, RPS6KA2, CACNA1C, VEGFA, VARS1, MMP2, TAC1, and G6PD. The input to KG-Predict is these genes. The output is a list of candidate drugs prioritized based on their genetic, genomic, and phenotypical relevance to diabetes and cataract, as shown in Supplementary Table S2.
Retrospective cohort study design for top-ranked drug candidates
We clinically evaluated the top 10 drug candidates: aspirin, indomethacin, acetylcysteine, theophylline, melatonin, thalidomide, ibuprofen, ephedrine, tamoxifen, and pentoxifylline with deidentified population-level EHR data in TriNetX (TriNetX, 2023). TriNetX Analytics provides secure web-based access to patient EHR data that covers over 90 million unique patients from hospitals, primary care clinics, and specialty treatment providers. The available information on TriNetX includes demographics, diagnoses, procedures, medications, laboratory testing, vital signs, and genomic information. The platform features built-in functions that allow for cohort selection, matching incidence and prevalence analysis, and comparison of characteristics and outcomes between matched cohorts. TriNetX only provides aggregate counts and statistical summaries of deidentified patients, so no protected health information or personal data are available to its users. As a result, the Metro Health System, Institutional Review Board in Cleveland, Ohio, has determined that all research using TriNetX is not human subject research and is therefore exempt from review. We have recently used the TriNetX network platform for large-scale cohort studies (Wang et al., 2021; Wang et al., 2022a; Pan et al., 2022b; Wang et al., 2022b; Wang et al., 2022c; Wang et al., 2022d; Wang et al., 2022e).
Patients were queried in TriNetX and categorized based on their International Classification of Diseases (ICD) code and medication history. Diabetes status was based on the diagnosis of “type 1 diabetes mellitus” (ICD E10) and “type 2 diabetes mellitus” (ICD E11). Hyperglycemia status was based on the diagnosis of “elevated blood glucose level” (ICD R73). Cataract status was based on the diagnosis of “cataract in diseases classified elsewhere” (ICD H25); “other cataracts” (ICD H26); or “age-related cataracts” (ICD H28). The outcomes of interest were cataract extraction, including cataract extraction status (ICD Z98.4), cataract surgery (SNOMED 110473004), or the presence of the intraocular lens (ICD Z96.1). At the time of the study, there were 1,033,763 patients with cataracts and DM. Of these patients, 694,494 subjects had undergone cataract extraction.
We then divided cataract patients into three groups, i.e., the type 1 diabetes mellitus (T1DM) patient group, the type 2 diabetes mellitus (T2DM) patient group, and the hyperglycemia patient group, and conducted a retrospective cohort study to investigate the associations between the top 10 drug candidates and the risk of cataract extraction in each patient group. For a given drug candidate (drug A), we identified a study cohort of patients diagnosed with drug A’s original indication. The study cohort was divided into the exposure cohort and the control cohort (Figure 2). The exposure cohort comprised patients with drug A’s original indication who were prescribed drug A but never underwent cataract extraction before drug prescription. The control cohort comprised patients with drug A’s original indication who never took drug A but rather other drugs with the same indication and who also never underwent cataract extraction before drug prescription. For example, melatonin is used for treating sleep disorders, and we identified patients in the control cohort who were prescribed at least one drug belonging to the class of hypnotics and sedatives (N05C) but never took melatonin. The exposure and control cohorts were then propensity-score-matched at a ratio of 1:1 using nearest neighbor greedy matching with a caliper of 0.1 standardized mean difference (SMD) to account for potential confounding variables. The list of covariates and their standardized name codes and data types in TriNetX is described in Supplementary Table S3. These covariates include demographics (age, sex, and race/ethnicity) and known comorbidities of cataracts, such as hypertension (ICD I10–I16), glaucoma (ICD H40–H42), dry eye syndrome (ICD H04.12), degeneration of the macula and posterior pole (ICD H35.3), tobacco use (ICD Z72.0), and DM drugs (A10).
Cox proportional hazards regression was used to investigate the risk of cataract extraction at various time points after drug prescription (5, 10, and 20 years). The index event was the date of drug prescription. The rate of cataract extraction was our outcome of interest (Figure 2). The analyses were then repeated for subgroups of male and female patients.
Results
Associations of AI-predicted top-ranked drug candidates with risk of extraction in the three DM patient groups
We performed retrospective cohort studies to evaluate the association between the top 10 candidate drugs and cataract extraction over the 5-year study period in three DM patient groups. Figure 3 shows the hazard ratios (HRs) and corresponding 95% confidence intervals (CIs) for the risk of cataract extraction for each drug. Due to an insufficient study sample size, tamoxifen, theophylline, and pentoxifylline were excluded from the T2DM group and hyperglycemia group, and thalidomide was excluded from the three DM patient groups. The characteristics of patients who were prescribed aspirin in the T1DM patient group before and after matching are shown in Table 1. The patient characteristics for other drugs are provided in Supplementary Tables S4–S13. As evidenced in the table, matching rendered comparable exposure and control cohorts with no significant differences among covariates. Aspirin, which is used to treat pain, inflammation, and rheumatoid arthritis, was associated with a significantly lower risk of cataract extraction in the three DM patient groups, with HRs of 0.71 (95% CI: 0.66–0.76), 0.72 (95% CI: 0.71–0.75), and 0.58 (95% CI: 0.55–0.61), respectively. In addition to aspirin, two drugs (melatonin and ibuprofen) were also associated with a significant reduction in the risk of cataract extraction compared to other drugs with comparable indications in the three DM patient groups: melatonin [HR = 0.76 (0.68–0.86), 0.79 (0.74–0.84), and 0.61 (0.55–0.66)] and ibuprofen [HR = 0.62 (0.56–0.68), 0.62 (0.59–0.64), and 0.61 (0.56–0.65)]. Acetylcysteine did not meet the threshold for statistically significant associations with reduced risk of cataract extraction in the T1DM patient group but was significantly associated with decreased cataract extraction in the other two groups with HRs of 0.65 (95% CI: 0.56–0.74) and 0.57 (95% CI: 0.42–0.75), respectively. For the other five drugs (indomethacin, theophylline, ephedrine, tamoxifen, and pentoxifylline), there was no significant reduction in cataract extraction risk. Follow-up analyses were conducted for aspirin, acetylcysteine, melatonin, and ibuprofen.
TABLE 1.
Characteristic | Before matching | After matching | ||||
---|---|---|---|---|---|---|
Aspirin cohort | Non-aspirin cohort | SMD | Aspirin cohort | Non-aspirin cohort | SMD | |
Total no. | 14,376 | 24,180 | 9,608 | 9,608 | ||
Age | 63.6 ± 12.2 | 60.4 ± 13.6 | 0.24* | 62.5 ± 12.2 | 62.3 ± 12.4 | 0.02 |
Sex assigned at birth, % | ||||||
Female | 53.1 | 55.4 | 0.04 | 52.9 | 52.7 | 0.004 |
Male | 46.8 | 44.5 | 0.04 | 47.1 | 47.2 | 0.004 |
Ethnicity, % | ||||||
Hispanic/Latinx | 11.6 | 11.9 | 0.008 | 12.1 | 12.1 | 0.005 |
Non-Hispanic/Latinx | 66.3 | 53.9 | 0.25* | 63.5 | 64.6 | 0.02 |
Race, % | ||||||
African/ U.S. citizens/Black | 25.4 | 19.3 | 0.14* | 23.5 | 24.1 | 0.01 |
White | 60.1 | 57.1 | 0.06 | 60.4 | 61.7 | 0.02 |
Asian | 1.5 | 1.4 | 0.001 | 1.5 | 1.3 | 0.01 |
Comorbidities, % | ||||||
Hypertension | 90.3 | 76.1 | 0.39* | 88.5 | 89.1 | 0.01 |
Tobacco use | 4.8 | 3.9 | 0.04 | 4.8 | 4.5 | 0.01 |
Glaucoma | 26.7 | 11.7 | 0.38* | 19.4 | 19.2 | 0.006 |
Dry eye syndrome | 17.5 | 5.9 | 0.36* | 10.7 | 10.4 | 0.01 |
Degeneration of macula and posterior pole | 17.1 | 5.5 | 0.36* | 10.1 | 9.2 | 0.02 |
Other drugs, % | ||||||
Drugs used in DM | 80.4 | 59.6 | 0.46* | 77.1 | 77.3 | 0.008 |
Note: SMD, standardized mean differences. *SMD, greater than 0.1, is a recommended threshold for declaring an imbalance.
Association of the four candidate drugs with the risk of cataract extraction according to sex assigned at birth over different study periods
As shown in Figures 4, 5, 6, three drugs (aspirin, melatonin, and ibuprofen) were associated with a significantly lower risk of cataract extraction in the three DM patient groups during a study period of 5, 10, or 20 years. Acetylcysteine displayed a significant reduction in the risk of cataract extraction compared with matched individuals who were prescribed other drugs with comparable indications in the T2DM group and hyperglycemia group during a study period of 5–20 years (Figure 7). We further investigated the effects of repurposed drugs on the risk of cataract extraction in men and women separately (Figures 4, 5, 6, 7). We observed that both male and female patients prescribed the four drugs experienced a significantly reduced risk of cataract extraction in the three DM patient groups. We finally analyzed the time trend of reduction in cataract prevalence of the four drugs in the three DM patient groups over 20 years (Figure 8). Melatonin showed a significant reduction in cataract prevalence in a sustained manner over 20 years. Patients who were prescribed aspirin, acetylcysteine, or ibuprofen also had positive effects during a study period of 5–20 years, and their effects waned after that.
Discussion
In this study, we developed a drug repurposing strategy to identify FDA-approved drugs that delay cataract extraction in DM patients. Our approach combines an AI-based drug repurposing system with EHR-based clinical corroboration. We identified aspirin, acetylcysteine, melatonin, and ibuprofen as therapies that may be associated with decreased risk of cataract extraction in diabetic patients with cataracts.
Our study shows that patients with cataracts who were prescribed aspirin experience a lower risk of cataract extraction than matched individuals in all three DM patient groups. Findings from animal models suggest that aspirin may prevent cataract formation by reducing carbamylation (Crompton et al., 1985) of soluble lens proteins, acetylation of lens proteins, inhibition of glycation, improved glucose tolerance, and an indirect antioxidant effect (Mihail, 1990). Our results are also consistent with those of a clinical trial evaluating aspirin in DM cataract patients with rheumatoid arthritis (Cotlier, 1981), in addition to several clinical trials (Heyningen and Harding, 1986; Harding et al., 1989; Klein et al., 2001), further suggesting possible protective mechanisms of aspirin against cataract extraction. However, several other studies report no significant reduction in cataract extraction for patients taking aspirin (Klein et al., 1987; Seddon et al., 1991; Hankinson et al., 1993; Christen et al., 2001). Many such studies focus on aspirin for a wide patient population, not just those with DM, so our finding that aspirin reduces the risk of cataract extraction in DM patients with pain, inflammation, or rheumatoid arthritis should not be extrapolated to all patients with cataracts.
Acetylcysteine is used to treat dry eye syndrome and respiratory diseases. We found that cataract patients who were prescribed acetylcysteine displayed a lower risk of cataract extraction than those prescribed control drugs (mucolytics or eye lubricants) in the T2DM patient group and the hyperglycemia patient group. Acetylcysteine is an endogenously produced antioxidant that scavenges free radicals (Carey et al., 2011). There is evidence in animal models that acetylcysteine reduces cataract formation by serving as a precursor for glutathione, a potent antioxidant (Zhang et al., 2008), and through other antioxidant mechanisms (Aydin et al., 2009).
Melatonin is an endogenous hormone produced by the pineal gland that is indicated for the treatment of sleep disorders. Patients with cataracts who were prescribed melatonin displayed a significantly lower rate of cataract extraction than matched patients in all three DM patient groups. The efficacy of melatonin in preventing cataracts has already been demonstrated in animal models (Abe et al., 1994; Yağci et al., 2006; Khorsand et al., 2016). These studies suggest that melatonin’s antioxidant properties, and its reduction of lipid peroxidation and blood sugar levels, may explain the mechanism by which it prevents cataract formation (Lledó et al., 2022). However, it may also act indirectly by inducing sleep and thus act on circadian genes, either by the downregulation of deleterious, cataractogenic genes such as AKR1 (Franko et al., 2020) or by upregulating protective genes, such as Nrf2 (Xing et al., 2023).
Ibuprofen, which is an NSAID, was identified as a potential candidate drug for delaying cataract extraction. Patients with cataracts who were prescribed ibuprofen had a lower risk of cataract extraction than those prescribed other NSAIDs in all three DM patient groups. Ibuprofen inhibits the enzymes cyclooxygenase-1 and -2, reducing the synthesis of prostaglandins and functioning as a potent antioxidant (Bushra and Aslam, 2010). Several animal studies indicate that ibuprofen possesses anti-cataract activity due to its antioxidant properties (Robert and Harding, 1992) and by binding to lens proteins and preventing cross-linking events that lead to lens opacification (Plater et al., 1997).
The fact that we found that the drugs did not have additive effects in reducing the risk of cataract surgery suggests a possible common mechanism of action, with COX-2 inhibition being a shared target of all four drugs, either via direct or indirect inhibition. COX-2 levels are increased in experimental cataracts (Cao et al., 2018), and levels are increased by known cataractogenic stimuli such as hyperglycemia (Song et al., 2020), UV light (Chan et al., 2015), smoking (Huang and Chen, 2011), low glutathione levels, and oxidative stress (Robert and Harding, 1992). On the contrary, in addition to the well-known inhibition of COX-1/2 by ibuprofen and aspirin, COX-2 protein or RNA levels have been shown to be suppressed by N-acetylcysteine and other antioxidants (Cao et al., 2018; Villagarcía et al., 2018), and by melatonin via ATF6, itself a COX-2 suppressor (Bu et al., 2017).
Our study has several limitations. First, we selected 12 genes that are deemed to be highly associated with DM cataracts as our model’s input to generate a ranked list of candidate drugs. However, our knowledge of genes involved in DM cataracts is still evolving. The AI-based drug prediction system is highly dynamic and can easily incorporate new data and knowledge. Second, the EHR database has limited information on drug usage duration, dosage, and patient compliance; for example, prescriptions may be obtained from outside providers that are not recorded in TriNetX. Due to these limitations, we could not evaluate how the duration, dosage, and compliance of medication use affect the risk of cataract extraction in DM cataract patients. Third, no subgrouping of cataract types (such as cortical, nuclear, posterior subcapsular cataract, and posterior capsule opacification) was performed, as only a small percentage of EHR records contained these sub-diagnoses. Therefore, this study could not detect medications that prevent the extraction of a specific subtype of cataract. Further limitations are dependent on the accuracy of the digital data entry in TriNetX. These include drug utilization, risk factors, patient misdiagnosis, and other possible confounding factors. A potential limitation may arise from propensity score matching. Although patient matching can strictly balance the distribution of covariates between exposure and control cohorts and therefore avoid many confounders, this method cannot account for those confounders that are unobserved or unmeasured due to the observational nature of the study design, which could increase data imbalance and bias. In addition, TriNetX represents patients who had medical encounters with healthcare systems, not a random selection of individuals throughout the United States, so the conclusions drawn from our analyses may not be representative of the entire U.S. citizens population. The generalizability of the results from the TriNetX platform remains unknown and needs to be validated in other populations and all drug recipients.
In conclusion, we believe we have identified drug candidates for delaying cataract extraction in DM patients by combining a knowledge graph-based drug discovery system with clinical corroboration. We identified four drugs (aspirin, acetylcysteine, melatonin, and ibuprofen) that appear to reduce the risk of or delay cataract extraction in this patient population. Our results provide the foundation for future hypothesis-driven clinical studies of these drug candidates to further understand their efficacy.
Funding Statement
This work was supported by the National Eye Institute (grants R01-EY02929 and CWRU), the Visual Sciences Research Center Core (grant P30 EY11373), and by the National Institute on Aging (grant nos. AG057557, AG061388, and AG062272).
Data availability statement
Publicly available datasets were analyzed in this study. These data can be found here: https://trinetx.com/.
Authors’ contributions
RX and VM conceived, designed, and supervised the study. ZG performed the drug prediction and clinical evaluation. RX, VM, ZG, and MG drafted the manuscript. DK contributed critically to the interpretation of the data. All authors approved the manuscript.
Conflict of interest
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
Publisher’s note
All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors, and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.
Supplementary material
The Supplementary Material for this article can be found online at: https://www.frontiersin.org/articles/10.3389/fphar.2023.1181711/full#supplementary-material
References
- Abe M., Reiter R. J., Orhii P. B., Hara M., Poeggeler B. (1994). Inhibitory effect of melatonin on cataract formation in newborn rats: Evidence for an antioxidative role for melatonin. J. Pineal Res. 17 (2), 94–100. 10.1111/j.1600-079x.1994.tb00119.x [DOI] [PubMed] [Google Scholar]
- Ang M. J., Afshari N. A. (2021). Cataract and systemic disease: A review. Clin. Exp. Ophthalmol. 49 (2), 118–127. 10.1111/ceo.13892 [DOI] [PubMed] [Google Scholar]
- Ashburner M., Ball C. A., Blake J. A., Botstein D., Butler H., Cherry J. M., et al. (2000). Gene ontology: Tool for the unification of biology. The gene ontology Consortium. Nat. Genet. 25, 25–29. 10.1038/75556 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Aydin B., Yagci R., Yılmaz F. M., Erdurmus M., Karadağ R., Keskin U., et al. (2009). Prevention of selenite-induced cataractogenesis by N-acetylcysteine in rats. Curr. Eye Res. 34 (3), 196–201. 10.1080/02713680802676885 [DOI] [PubMed] [Google Scholar]
- Bixler J. E. (2019). Cataracts and their treatment in people with diabetes. ADA Clin. Compend. 6-10, 6–10. 10.2337/db20191-6 [DOI] [PubMed] [Google Scholar]
- Bu L. J., Yu H. Q., Fan L. L., Li X. Q., Wang F., Liu J. T., et al. (2017). Melatonin, a novel selective ATF-6 inhibitor, induces human hepatoma cell apoptosis through COX-2 downregulation. World J. Gastroentero 23 (6), 986–998. 10.3748/wjg.v23.i6.986 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bushra R., Aslam N. (2010). An overview of clinical pharmacology of ibuprofen. Oman Med. J. 25 (3), 155–1661. 10.5001/omj.2010.49 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Cao J., Wang T., Wang M. (2018). Investigation of the anti-cataractogenic mechanisms of curcumin through in vivo and in vitro studies. BMC Ophthalmol. 18 (1), 48–8. 10.1186/s12886-018-0711-8 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Carey J. W., Pinarci E. Y., Penugonda S., Karacal H., Ercal N. (2011). In vivo inhibition of l-buthionine-(S, R)-sulfoximine-induced cataracts by a novel antioxidant, N-acetylcysteine amide. Free Radic. Biol. Med. 50 (6), 722–729. 10.1016/j.freeradbiomed.2010.12.017 [DOI] [PubMed] [Google Scholar]
- Chan C. M., Huang C. H., Li H. J., Hsiao C. Y., Su C. C., Lee P. L., et al. (2015). Protective effects of resveratrol against UVA-induced damage in ARPE19 cells. Int. J. Mol. Sci. 16 (3), 5789–5802. 10.3390/ijms16035789 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Christen W. G., Ajani U. A., Schaumberg D. A., Glynn R. J., Manson J. E., Hennekens C. H. (2001). Aspirin use and risk of cataract in posttrial follow-up of Physicians' Health Study I. Arch. Ophthalmol. 119 (3), 405–412. 10.1001/archopht.119.3.405 [DOI] [PubMed] [Google Scholar]
- Cotlier E. (1981). Aspirin effect on cataract formation in patients with rheumatoid arthritis alone or combined with diabetes. Int. Ophthalmol. 3 (3), 173–177. 10.1007/BF00130701 [DOI] [PubMed] [Google Scholar]
- Crompton M., Rixon K. C., Harding J. J. (1985). Aspirin prevents carbamylation of soluble lens proteins and prevents cyanate-induced phase separation opacities in vitro: A possible mechanism by which aspirin could prevent cataract. Exp. Eye Res. 40 (2), 297–311. 10.1016/0014-4835(85)90014-4 [DOI] [PubMed] [Google Scholar]
- Desai M., Pratt L. A., Lentzner H., Robinson K. N. (1995). Trends in vision and hearing among older U.S. citizens. JAMA 273, 1–8. 10.1037/e620682007-001 [DOI] [PubMed] [Google Scholar]
- Drinkwater J. J., Davis W. A., Davis T. M. (2019). A systematic review of risk factors for cataract in type 2 diabetes. Diabetes Metab. Res. Rev. 35 (1), e3073. 10.1002/dmrr.3073 [DOI] [PubMed] [Google Scholar]
- Eppig J. T., Smith C. L., Blake J. A., Ringwald M., Kadin J. A., Richardson J. E., et al. (2017). Mouse genome informatics (MGI): Resources for mining mouse genetic, genomic, and biological data in support of primary and translational research. Sys Genet. 47-73, 47–73. 10.1007/978-1-4939-6427-7_3 [DOI] [PubMed] [Google Scholar]
- Frankfater C., Bozeman S. L., Hsu F. F., Andley U. P. (2020). Alpha-crystallin mutations alter lens metabolites in mouse models of human cataracts. PloS one 15 (8), e0238081. 10.1371/journal.pone.0238081 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Franko A., Berti L., Hennenlotter J., Rausch S., Scharpf M. O., de Angelis M. H., et al. (2020). Transcript levels of aldo-keto reductase family 1 subfamily C (AKR1C) are increased in prostate tissue of patients with type 2 diabetes. J. Pers. Med. 10 (3), 124. 10.3390/jpm10030124 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gao Z., Ding P., Xu R. K. G.-P. (2022). A knowledge graph computational framework for drug repurposing. J. Biomed. Inf. 104133. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gao Z., Winhusen T. J., Gorenflo M., Ghitza U. E., Davis P. B., Kaelber D. C., et al. (2023). Repurposing ketamine to treat cocaine use disorder: Integration of artificial intelligence‐based prediction, expert evaluation, clinical corroboration, and mechanism of action analyses. Addiction. 10.1111/add.16168 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gesualdo C., Balta C., Platania C. B. M., Trotta M. C., Herman H., Gharbia S., et al. (2021). Fingolimod and diabetic retinopathy: A drug repurposing study. Front. Pharmacol. 12, 718902. 10.3389/fphar.2021.718902 [DOI] [PMC free article] [PubMed] [Google Scholar]
- GTEx Consortium (2015). Human genomics. The genotype-tissue expression (GTEx) pilot analysis: Multitissue gene regulation in humans. Science 348, 648–660. 10.1126/science.1262110 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hankinson S. E., Seddon J. M., Colditz G. A., Stampfer M. J., Rosner B., Speizer F. E., et al. (1993). A prospective study of aspirin use and cataract extraction in women. Arch. Ophthalmol. 111 (4), 503–508. 10.1001/archopht.1993.01090040095040 [DOI] [PubMed] [Google Scholar]
- Harding J. J., Egerton M., Harding R. S. (1989). Protection against cataract by aspirin, paracetamol and ibuprofen. Acta Ophthalmol. 67 (5), 518–524. 10.1111/j.1755-3768.1989.tb04102.x [DOI] [PubMed] [Google Scholar]
- Hashim Z., Zarina S. (2012). Osmotic stress induced oxidative damage: Possible mechanism of cataract formation in diabetes. J. Diabetes Complicat 26 (4), 275–279. 10.1016/j.jdiacomp.2012.04.005 [DOI] [PubMed] [Google Scholar]
- Heyningen R., Harding J. (1986). Do aspirin-like analgesics protect against cataract?: A case-control study. lancet 327 (8490), 1111–1113. 10.1016/s0140-6736(86)91834-9 [DOI] [PubMed] [Google Scholar]
- Huang R. Y., Chen G. G. (2011). Cigarette smoking, cyclooxygenase-2 pathway and cancer. Biochim. Biophys. Acta - Rev. C 1815 (2), 158–169. 10.1016/j.bbcan.2010.11.005 [DOI] [PubMed] [Google Scholar]
- Khorsand M., Akmali M., Sharzad S., Beheshtitabar M. (2016). Melatonin reduces cataract formation and aldose reductase activity in lenses of streptozotocin-induced diabetic rat. Iran. J. Med. Sci. 41 (4), 305–313. [PMC free article] [PubMed] [Google Scholar]
- Klein B. E., Klein R., Lee K. E., Danforth L. G. (2001). Drug use and five-year incidence of age-related cataracts: The Beaver Dam Eye Study. Ophthalmology 108 (9), 1670–1674. 10.1016/s0161-6420(01)00656-x [DOI] [PubMed] [Google Scholar]
- Klein B. E., Klein R., Moss S. E. (1987). Is aspirin use associated with lower rates of cataracts in diabetic individuals? Diabetes Care 10 (4), 495–499. 10.2337/diacare.10.4.495 [DOI] [PubMed] [Google Scholar]
- Levin J. M., Oprea T. I., Davidovich S., Clozel T., Overington J. P., Vanhaelen Q., et al. (2020). Artificial intelligence, drug repurposing and peer review. Nat. Biotechnol. 38 (10), 1127–1131. 10.1038/s41587-020-0686-x [DOI] [PubMed] [Google Scholar]
- Lin H. J., Huang Y. C., Lin J. M., Liao W. L., Wu J. Y., Chen C. H., et al. (2013). Novel susceptibility genes associated with diabetic cataract in a Taiwanese population. Ophthalmic Genet. 34 (1-2), 35–42. 10.3109/13816810.2012.736590 [DOI] [PubMed] [Google Scholar]
- Lledó V. E., Alkozi H. A., Sánchez-Naves J., Fernandez-Torres M. A., Guzman-Aranguez A. (2022). Melatonin counteracts oxidative damage in lens by regulation of Nrf2 and NLRP3 inflammasome activity. Exp. Eye Res. 215, 108912. 10.1016/j.exer.2021.108912 [DOI] [PubMed] [Google Scholar]
- Mihail S. (1990). Aspirin in the preventive treatment of cataract. Oftalmol. Buchar. Rom. 1990 34 (1), 43–46. [PubMed] [Google Scholar]
- Mullard A. (2014). New drugs cost US$2.6 billion to develop. Drug Discov. 13 (12), 877. 10.1038/nrd4507 [DOI] [Google Scholar]
- OntoSIML P. (2021). Phenomebrowser. Available at: http://phenomebrowser.net/archive/sider_drug_phenotype.txt .
- Pan X., Lin X., Cao D., Zeng X., Yu P. S., He L., et al. (2022). Deep learning for drug repurposing: Methods, databases, and applications. Wiley Interdiscip. Rev. Comput. Mol. Sci. 12 (4), e1597. 10.1002/wcms.1597 [DOI] [Google Scholar]
- Pan Y., Davis P. B., Kaebler D. C., Blankfield R. P., Xu R. (2022). Cardiovascular risk of gabapentin and pregabalin in patients with diabetic neuropathy. Cardiovasc Diabetol. 21 (1), 170–179. 10.1186/s12933-022-01610-9 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Park K. (2019). A review of computational drug repurposing. Transl. Clin. Pharmacol. 27 (2), 59–63. 10.12793/tcp.2019.27.2.59 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Platania C. B. M., Ronchetti S., Riccardi C., Migliorati G., Marchetti M. C., Di Paola L., et al. (2020). Effects of protein-protein interface disruptors at the ligand of the glucocorticoid-induced tumor necrosis factor receptor-related gene (GITR). Biochem. Pharmacol. 178, 114110. 10.1016/j.bcp.2020.114110 [DOI] [PubMed] [Google Scholar]
- Plater M. L., Goode D., Crabbe J. C. (1997). Ibuprofen protects alpha-crystallin against posttranslational modification by preventing protein cross-linking. Ophthalmic Res. 29 (6), 421–428. 10.1159/000268043 [DOI] [PubMed] [Google Scholar]
- Pushpakom S., Iorio F., Eyers P. A., Escott K. J., Hopper S., Wells A., et al. (2019). Drug repurposing: Progress, challenges and recommendations. Nat. Rev. Drug Discov. 18 (1), 41–58. 10.1038/nrd.2018.168 [DOI] [PubMed] [Google Scholar]
- Robert B., Harding J. J. (1992). Prevention of cataract in diabetic rats by aspirin, paracetamol (acetaminophen) and ibuprofen. Exp. Eye Res. 54 (4), 509–518. 10.1016/0014-4835(92)90129-g [DOI] [PubMed] [Google Scholar]
- Seddon J., Fong D., West S. K., Valmadrid C. T. (1995). Epidemiology of risk factors for age-related cataract. Surv. Ophthalmol. 39 (4), 323–334. 10.1016/s0039-6257(05)80110-9 [DOI] [PubMed] [Google Scholar]
- Seddon J. M., Christen W. G., Manson J. E., Buring J. E., Sperduto R. D., Hennekens C. H. (1991). Low-dose aspirin and risks of cataract in a randomized trial of US physicians. Arch. Ophthalmol. 109 (2), 252–255. 10.1001/archopht.1991.01080020098052 [DOI] [PubMed] [Google Scholar]
- Shichi H. (2004). Cataract formation and prevention. Expert Opin. Investig. Drugs 13 (6), 691–701. 10.1517/13543784.13.6.691 [DOI] [PubMed] [Google Scholar]
- Song X. L., Li M. J., Liu Q., Hu Z. X., Xu Z. Y., Li J. H., et al. (2020). Cyanidin-3-O-glucoside protects lens epithelial cells against high glucose-induced apoptosis and prevents cataract formation via suppressing NF-κB activation and Cox-2 expression. J. Agric. Food Chem. 68 (31), 8286–8294. 10.1021/acs.jafc.0c03194 [DOI] [PubMed] [Google Scholar]
- TriNetX (2023). Analytics Network. Available at: https://trinetx.com .
- Villagarcía H. G., Castro M. C., Arbelaez L. G., Schinella G., Massa M. L., Spinedi E., et al. (2018). N-Acetyl-l-Cysteine treatment efficiently prevented pre-diabetes and inflamed-dysmetabolic liver development in hypothalamic obese rats. Life Sci. 199, 88–95. 10.1016/j.lfs.2018.03.008 [DOI] [PubMed] [Google Scholar]
- Wang L., Berger N. A., Kaelber D. C., Davis P. B., Volkow N. D., Xu R. (2022). Incidence rates and clinical outcomes of SARS-CoV-2 infection with the Omicron and Delta variants in children younger than 5 years in the US. JAMA Pediatr. 176, 811, 813. 10.1001/jamapediatrics.2022.0945 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wang L., Berger N. A., Xu R. (2021). Risks of SARS-CoV-2 breakthrough infection and hospitalization in fully vaccinated patients with multiple myeloma. JAMA Netw. open 4 (11), e2137575. 10.1001/jamanetworkopen.2021.37575 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wang L., Davis P. B., Kaelber D. C., Volkow N. D., Xu R. (2022). Comparison of mRNA-1273 and BNT162b2 vaccines on breakthrough SARS-CoV-2 infections, hospitalizations, and death during the delta-predominant period. JAMA 327 (7), 678–680. 10.1001/jama.2022.0210 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wang L., Davis P. B., Kaelber D. C., Xu R. (2022). COVID‐19 breakthrough infections and hospitalizations among vaccinated patients with dementia in the United States between December 2020 and August 2021. Alzheimer's Dement 19. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wang L., Wang Q., Davis P. B., Volkow N. D., Xu R. (2022). Increased risk for COVID‐19 breakthrough infection in fully vaccinated patients with substance use disorders in the United States between December 2020 and August 2021. World Psychiatry 21 (1), 124–132. 10.1002/wps.20921 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wang W., Kaelber D. C., Xu R., Berger N. A. (2022). Breakthrough SARS-CoV-2 infections, hospitalizations, and mortality in vaccinated patients with cancer in the US between December 2020 and November 2021. JAMA Oncol. 8, 1027–1034. 10.1001/jamaoncol.2022.1096 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wishart D. S., Knox C., Guo A. C., Cheng D., Shrivastava S., Tzur D., et al. (2008). DrugBank: A knowledgebase for drugs, drug actions and drug targets. Nucleic Acids Res. 36, D901–D906. 10.1093/nar/gkm958 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wu T. T., Chen Y. Y., Chang H. Y., Kung Y. H., Tseng C. J., Cheng P. W. (2020). AKR1B1-Induced epithelial–mesenchymal transition mediated by RAGE-oxidative stress in diabetic cataract lens. Antioxidants 9 (4), 273. 10.3390/antiox9040273 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Xing S., Guo Z., Lang J., Zhou M., Cao J., He H., et al. (2023). N-Acetyl-l-cysteine ameliorates gestational diabetes mellitus by inhibiting oxidative stress. Gynecol. Endocrinol. 39 (1), 2189969. 10.1080/09513590.2023.2189969 [DOI] [PubMed] [Google Scholar]
- Xu R., Wang Q. (2013). Large-scale extraction of accurate drug-disease treatment pairs from biomedical literature for drug repurposing. BMC bioinform 14, 181–211. 10.1186/1471-2105-14-181 [DOI] [PMC free article] [PubMed] [Google Scholar]
- Yağci R., Aydin B., Erdurmuş M., Karadağ R., Gürel A., Durmuş M., et al. (2006). Use of melatonin to prevent selenite-induced cataract formation in rat eyes. Curr. Eye Res. 31 (10), 845–850. 10.1080/02713680600899663 [DOI] [PubMed] [Google Scholar]
- Zhang S., Chai F. Y., Yan H., Guo Y., Harding J. J. (2008). Effects of N-acetylcysteine and glutathione ethyl ester drops on streptozotocin-induced diabetic cataract in rats. Mol. Vis. 14, 862–870. [PMC free article] [PubMed] [Google Scholar]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Data Availability Statement
Publicly available datasets were analyzed in this study. These data can be found here: https://trinetx.com/.