Skip to main content
Aging Cell logoLink to Aging Cell
. 2023 Aug 18;22(10):e13964. doi: 10.1111/acel.13964

Bloom syndrome patients and mice display accelerated epigenetic aging

Jamie Lee 1, Joshua Zhang 2, Maeve Flanagan 3, Julian A Martinez 2,4,5, Christopher Cunniff 3, Nicole Kucine 3, Ake T Lu 2,6, Amin Haghani 2,6, Juozas Gordevičius 7, Steve Horvath 2,6, Vivian Y Chang 1,8,9,
PMCID: PMC10577546  PMID: 37594403

Abstract

Bloom syndrome (BSyn) is an autosomal recessive disorder caused by variants in the BLM gene, which is involved in genome stability. Patients with BSyn present with poor growth, sun sensitivity, mild immunodeficiency, diabetes, and increased risk of cancer, most commonly leukemias. Interestingly, patients with BSyn do not have other signs of premature aging such as early, progressive hair loss and cataracts. We set out to determine epigenetic age in BSyn, which can be a better predictor of health and disease over chronological age. Our results show for the first time that patients with BSyn have evidence of accelerated epigenetic aging across several measures in blood lymphocytes, as compared to carriers. Additionally, homozygous Blm mice exhibit accelerated methylation age in multiple tissues, including brain, blood, kidney, heart, and skin, according to the brain methylation clock. Overall, we find that Bloom syndrome is associated with accelerated epigenetic aging effects in multiple tissues and more generally a strong effect on CpG methylation levels.

Keywords: Bloom syndrome, cancer, DNA repair, epigenetic aging


Bloom syndrome is an autosomal recessive disorder caused by germline variants in a DNA repair gene called BLM. Patients with Bloom Syndrome have increased risk of cancer and variable features of accelerated aging. We demonstrate that Bloom Syndrome patients have increased epigenetic aging compared to carriers and that a mouse model of Bloom also shows features of accelerated epigenetic aging in a clock‐ and tissue‐specific manner.

graphic file with name ACEL-22-e13964-g003.jpg

1. INTRODUCTION

Bloom syndrome (BSyn) is caused by biallelic null variants in BLM, which encodes for a DNA helicase protein in the RecQ family that functions in the maintenance of replication fork stability (Bennett & Keck, 2004; Daley et al., 2014). Cells from patients with BSyn demonstrate a 10‐fold increase in the frequency of sister chromatid exchanges (SCEs) compared to normal patients (Chaganti et al., 1974). Additionally, BLM plays a role in telomere maintenance by interacting with telomere proteins TRF1 and TRF2 (Barefield & Karlseder, 2012; Lillard‐Wetherell et al., 2004; Lu, O'Rourke, et al., 2019; Rezazadeh, 2013). While persistent DNA damage is thought to correlate with aging and drive senescence, it is unresolved whether germline variants in BLM cause accelerated aging that can be measured using molecular markers.

Patients with BSyn present with short stature, congenital telangiectatic erythema, and increased susceptibility to infections and cancer, most commonly leukemia, lymphoma, and colorectal cancer (Aktas et al., 2000; Aljarad et al., 2018; Bloom, 1954; Cunniff et al., 2017; Sugranes et al., 2022). Traditional anti‐cancer treatments that cause damage to DNA, such as chemotherapy and radiation, often result in severe life‐threatening toxicities and increased risk of secondary malignancies for patients with BSyn, warranting significant dose modifications from standard practice (Adams et al., 2013; Grasemann et al., 1998; Kataoka et al., 1989). The molecular basis for the early cancers and treatment‐related toxicities seen in patients with Bloom Syndrome is poorly understood beyond the function of BLM in maintaining genomic integrity through its DNA helicase activity.

A different member of the RecQ helicase family of enzymes, WRN, underlies Werner Syndrome (Yu et al., 1996). Werner Syndrome is characterized by signs of premature aging, such as cataracts, early‐onset graying, and skin changes (Chen et al., 2018; de Renty & Ellis, 2017; Takemoto et al., 2013), which are absent in Bloom Syndrome. Yet, cumulative and persistent DNA damage, as seen in BSyn, are thought to contribute to aging (de Winter & Joenje, 2009; Ou & Schumacher, 2018; Ribezzo et al., 2016; Vogel et al., 1999). In fact, it has previously been shown that whole blood from patients with Werner have accelerated epigenetic aging, even after adjusting for chronologic age and blood counts (Maierhofer et al., 2017).

Epigenetic age, an estimator of biological age that can be built from DNA methylation levels, can be a better predictor of health, cancer, and mortality risk than chronological age (Horvath, 2013; Lu, Quach, et al., 2019; Morales Berstein et al., 2022). Epigenetic age acceleration, where the epigenetic age is greater than the chronological age, can occur as the result of segmental progeria such as Down Syndrome (Horvath et al., 2015) and Werner syndrome (Maierhofer et al., 2017). We hypothesized that BSyn patients will have increased epigenetic age due accumulation of DNA damage over time. In this study, we analyzed blood samples from BSyn patients and carriers, as well as a mouse model of Bloom syndrome (Luo et al., 2000), and demonstrate that patients and mice with BSyn have accelerated epigenetic age across multiple measures and tissues.

2. RESULTS

2.1. Human data

We generated and analyzed data from 18 BSyn samples (age range: 1–38 years) and 30 samples from carriers of BSyn (age range: 23–69 years) (Table 1). They represented different germline variants in BLM as well as the Ashkenazi Jewish founder variant noted as Blm Ash (German et al., 1977; Li et al., 1998). There were 2 participants with BSyn with unconfirmed variants but had increased sister chromatid exchange and 2 obligate carriers.

TABLE 1.

Characteristics of patient samples from the Bloom syndrome Registry, Jscreen, and UCLA.

Age at sample collection (years) Condition Sex Variant
0.8 BSyn M BLM ash ; BLM ash
1.8 BSyn F 275delA; 275delA
1.9 BSyn F 1933C > T; 3261delT
2 BSyn F 2695C > T; 3171‐3172insT
2.6 BSyn M BLM ash ; BLM ash
4.3 BSyn M BLM ash ; BLM ash
5 BSyn M 1642C > T; Deletion of exons 11–12
5.8 BSyn M 2695C > T; 2695C > T
6 BSyn M 1642C > T; Deletion of exons 11–12
8.1 BSyn F 3727insA; 3727insA
16 BSyn F BLM ash ; Deletion of exons 3–22
26 BSyn F 2695C > T; 2695C > T
26.6 BSyn F 1933C > T; 1933C > T
27 BSyn F 2695C > T; 2695C > T
32 BSyn M BLM ash ; BLM ash
36.3 BSyn M 2506‐2507delAG; 2506‐2507delAG
37 BSyn M Unknown
38 BSyn M Unknown
23.8 Carrier F BLM ash
24 Carrier F Unknown
24.6 Carrier F BLM ash
25.1 Carrier M BLM ash
27.9 Carrier M Unknown
29.2 Carrier F 3261delT
29.7 Carrier M 275delA
30.8 Carrier F 275delA
31.4 Carrier M 2695C > T
31.7 Carrier M 1933C > T
32 Carrier M BLM ash
32.4 Carrier F 3727insA
33.8 Carrier M BLM ash
34 Carrier M BLM ash
34.3 Carrier M BLM ash
35.8 Carrier F 2695C > T
37.8 Carrier M 3727insA
38 Carrier M 1642C > T
39 Carrier F 1642C > T
40 Carrier M Deletion of exons 11–12
41 Carrier M Deletion of exons 11–12
46 Carrier F 1933C > T
46.6 Carrier M 1933C > T
59 Carrier F Deletion of exons 3–22
62 Carrier M BLM ash
63 Carrier M BLM ash
64 Carrier M BLM ash
65 Carrier M 1642C > T
67.5 Carrier F 2506‐2507delAG
69.4 Carrier M 2506‐2507delAG

In our study, we considered several epigenetic clocks that were implemented in the online DNAm methylation (DNAm) age calculator (see Section 4). First, we used the DNA methylation pan‐tissue clock, which is a multi‐tissue predictor of age developed using 8000 samples from 51 healthy tissues and cell types (Horvath, 2013). It quantitatively measures the cumulative effect of aging using 353 CpG sites and applies to a broad spectrum of tissues and cell types. We showed that patients with BSyn have significantly increased DNAm age according to the pan‐tissue clock (Figure 1a).

FIGURE 1.

FIGURE 1

DNA methylation age of BSyn patients and carriers. (a) Pan‐tissue clock, (b) Skin and blood clock, (c) Hannum clock, (d) GrimAge clock, (e) PhenoAge clock, and (f) telomere length. P‐values calculated by simple linear regression for pan‐tissue, skin and blood, Hannum, GrimAge clocks and telomere length. Quadratic regression used for PhenoAge.

Although the pan‐tissue clock can be used across all tissues, it does not perform as well when using fibroblasts, which are routinely used for in vitro experiments (Horvath, 2013). The skin and blood clock was subsequently developed to estimate chronologic ages of human fibroblasts, keratinocytes, endothelial cells, skin cells, and other tissues (Horvath et al., 2018). While the original pan‐tissue clock did not detect any age acceleration in Hutchinson Gilford Progeria Syndrome (HGPS), the skin and blood clock applied to fibroblast samples from patients with HGPS did detect accelerated epigenetic age. When we applied the skin and blood clock to our samples, we found that patients with BSyn, like HGPS, have significantly increased DNAm age compared to carriers (Figure 1b).

The Hannum blood‐based clock was developed using methylome data from 656 individuals, ages 19 to 101 years, combined with clinical data such as gender and body mass index (BMI) (Hannum et al., 2013). This model has been shown to apply to other human tissues and detects accelerated aging in tumor tissue. Using Hannum's blood‐based clock, we show that patients with BSyn have increased epigenetic age compared to carriers (Figure 1c).

Patients with BSyn also have an increased GrimAge and PhenoAge, two clocks that predict human lifespan and health span, mortality risk, cancer, physical functioning, and Alzheimer's disease (Figure 1d,e; Horvath, 2013; Levine et al., 2018; Lu, Quach, et al., 2019). Of note, GrimAge is also a DNA methylation‐based estimator of smoking pack years (Lu, Quach, et al., 2019). PhenoAge was trained using clinical measures such as coronary heart disease, physical functioning, familial longevity, cognitive impairment, diet, physical activity, obesity, amongst others, and considered 20,169 CpGs (Levine et al., 2018).

During statistical analyses, we compared linear and quadratic regression fits for age versus each of the epigenetic clocks and found linear fit to be sufficient for pan‐tissue, GrimAge, Hannum, and Skin and Blood clocks, while quadratic fit was better for PhenoAge. Therefore, we used simple linear regression to examine differences between BSyn and carriers for the pan‐tissue, GrimAge, Hannum, and Skin and Blood clocks to compare slopes, and quadratic regression for PhenoAge to compare the coefficient of age squared. The Y‐intercepts for Hannum and PhenoAge are negative values most likely because these epigenetic clocks were trained on adult samples and there are no data on how these clocks perform in children. We also demonstrate that the pan‐tissue, SkinBlood, Hannum, GrimAge, and PhenoAge clocks are highly correlated with each other (Figure S1a,b).

Telomeres are repetitive DNA sequences at the ends of chromosomes that shorten with each cell division (Lopez‐Otin et al., 2013). A specialized DNA polymerase known as telomerase is responsible for preserving the repetitive DNA sequences at telomeres (Zvereva et al., 2010). Senescence or apoptosis is triggered when there is DNA damage at telomeres or when telomeres are critically shortened (Fumagalli et al., 2012; Hayflick & Moorhead, 1961; Hewitt et al., 2012). We used DNA methylation‐based estimates of telomere length (Lu, Seeboth, et al., 2019) and found patients with BSyn had significantly shorter telomere length, DNAmTL, compared to carriers (Figure 1f). DNAmTL only exhibits a weak correlation with actual telomere length (r = 0.4), that is, our findings should not be interpreted as statements about actual telomere length. Thus, it is possible that DNAmTL relates to Bloom syndrome while actual telomere length does not. In fact, there are reports of normal telomere length and telomerase activity in BSyn cells (Kaneko et al., 2001). Other studies have shown that BLM functions in alternative lengthening (as opposed to shortening) of telomeres (ALT) independent of telomerase (Acharya et al., 2014; Lu, O'Rourke, et al., 2019; Opresko et al., 2005).

2.2. Mouse studies

We then studied epigenetic aging in a Bloom syndrome mouse model created using embryonic stem cell technology (Luo et al., 2000). Mice with null alleles generated using this approach did not develop to term but the Blm m3 allele gives rise to an aberrant message. Blm m3/m3 mice are viable, fertile, and have increased sister chromatid exchange, as well as cancer predisposition.

Brain, heart, kidney, liver, skin, and blood were sampled from four wildtype C57Bl6 mice (noted as Blm+/+), four heterozygous mice, which were the F1 progeny of wildtype and Blm m3/m3 mice (noted as Blm+/m3), and four homozygous Blm m3/m3 mice all aged between 70–73 days. There were no statistically significant differences between wildtype and heterozygous Blm+/m3 across any of the measured epigenetic clocks (data not shown). Therefore, these groups were combined for downstream analyses.

There was no statistically significant increase in DNAm age according to the mouse pan‐tissue clock (Figure 2). The tissue‐specific mouse clocks showed significantly increased methylation aging in brain (Figure 3a) but not heart, kidney, liver, skin, or blood (Figure 3b–f) in Blm m3/m3 mice compared to wildtype and heterozygous mice. We also found that Blm m3/m3 mice have increased DNAm age according to the murine brain clock in brain, heart, kidney, skin, and blood (Figure 4a–c,e,f), compared to wildtype and heterozygous mice.

FIGURE 2.

FIGURE 2

DNA methylation age of mutant Blm mouse model (m3/m3) compared to wildtype (+/+) and heterozygotes (+/m3) using the Pan‐tissue clock. Data are shown as mean ± SEM with comparisons made using unpaired t‐test.

FIGURE 3.

FIGURE 3

DNA methylation age of mutant Blm mouse model (m3/m3) compared to wildtype (+/+) and heterozygotes (+/m3) using tissue‐specific clocks. Data are shown as mean ± SEM with comparisons made using unpaired t‐test. **p < 0.0021.

FIGURE 4.

FIGURE 4

DNA methylation age of mutant Blm mouse model (m3/m3) compared to wildtype (+/+) and heterozygotes (+/m3) using the brain tissue clock. Data are shown as mean ± SEM with comparisons made using unpaired t‐test. **p < 0.0021, ***p < 0.0002.

Given the surprising result that the murine brain clock measures increased DNAm in Blm m3/m3 mice in brain, heart, kidney, skin, and blood compared to wildtype and heterozygous mice, we applied the other tissue‐specific clocks to all other tissues and found that most did not result in any statistically significant differences (data not shown). We created correlation plots using the pan‐tissue and tissue‐specific clocks and were able to demonstrate that the pan‐tissue clock for mouse appears to have limitations in accurately predicting the ages in specific tissues (Figure S2). Furthermore, we demonstrate that the brain clock can apply to heart and kidney tissues but not to skin and liver.

Epigenome wide association study (EWAS) showed significantly differentially hyper‐ and hypomethylated genes (Figure 5). We used Genomic Regions Enrichment of Annotations Tool (GREAT) to analyze the functional significance of these hyper‐ and hypomethylated regions (McLean et al., 2010). Gene ontology (GO) enrichment analysis showed hypermethylated genes in many biological processes related to DNA conformation and packaging, as well as chromatin assembly, disassembly, and remodeling.

FIGURE 5.

FIGURE 5

Manhattan plot of median Z‐scores from murine epigenome‐wide association study using coded genotypes in a recessive fashion: 0 = WT/ heterozygous, homozygous = 1. The vertical red line indicates location of Blm gene at 7:80454993 using GRCm38/mm10 genome. Horizontal red lines indicate Z‐score ± 6.

Tissue‐specific GREAT analyses also showed hypermethylated regions in DNA packaging and chromatin assembly, as well as genes involved in upregulation of Th1 cells, post‐radiation tumor escape signatures, breast cancer invasiveness and clinical outcome, and acute myeloid leukemia stem cells (Figure 6; Gu et al., 2014, 2016). Classification of protein families found in hypomethylated regions included C‐type lectin and Ly49‐like N‐terminal, which both function in immunity (Brown et al., 2018; Malarkannan, 2006) and could be related to the mild immunodeficiency seen in some patients with BSyn.

FIGURE 6.

FIGURE 6

Tissue‐specific GREAT analyses showing annotation of hyper‐ and hypomethylated regions. Bars on the left indicate the number of annotation genes within the custom mammalian array. Each cell presents unadjusted hypergeometric p‐values (number of overlapped genes) that have an FDR <0.05 and overlapped genes > = 3 in the heatmap. The heatmap color codes the ‐log10 p‐values.

3. DISCUSSION

Bloom syndrome is a rare cancer predisposition syndrome thought to be driven by defective DNA repair leading to genomic instability. There is a wide spectrum of clinical phenotypes seen in disorders caused by genomic instability. For example, Hereditary Breast and Ovarian Cancer (HBOC) syndrome caused primarily by variants in BRCA1/2 which have overlapping functions with BLM, is associated with increased cancer risk without syndromic features (Gudmundsdottir & Ashworth, 2006; Wu et al., 2010; Yoshida, 2021). Fanconi Anemia (FA), on the other hand, is a recessive disorder that exhibits increased chromosomal breakage and is associated with growth abnormalities, congenital malformation, bone marrow failure, increased risk of head and neck cancers, and is also increasingly recognized as having early senescence (Helbling‐Leclerc et al., 2021; Kalb et al., 2006; Nalepa & Clapp, 2018). Lastly, a recent study on patients with short telomere syndromes demonstrated that T cell exhaustion rather than genomic instability led to development of solid cancers (Schratz et al., 2023). These examples highlight gaps in our understanding of genomic instability, cancer, and aging.

A recent study investigating the incidence of cancer in individuals from the Bloom Syndrome Registry revealed that 53% were diagnosed with cancer and 35% of individuals with cancer developed multiple cancers (Sugranes et al., 2022). Yet, cancer surveillance in this rare population is challenging due to the variety of cancers that can develop and lack of evidence‐based guidelines (Cunniff et al., 2018; Walsh et al., 2017). Development of a biomarker of aging and cancer would revolutionize clinical care of BSyn as well as many other cancer predisposition syndromes.

Epigenetic clocks have been shown to be robust markers of age and mortality. This study reports, for the first time, a molecular marker of accelerated aging detected in BSyn humans and mice. Interestingly, when we studied different tissues and different epigenetic clocks in the Bloom mouse model, the brain clock most consistently found accelerated aging in the Bloom mice compared to heterozygous and wildtype mice. This may be explained by the decreased proliferative capacity of postnatal mouse brain resembling cellular features from Bloom mice (Semenov, 2021). Indeed, cells from BSyn patients also display decreased DNA replication (Subramanian et al., 2021) and silencing of BLM in vitro leads to inhibition of viability and proliferation (Feng et al., 2022). This was a surprising result that merits further investigation.

Carriers of BSyn have not been extensively studied and it is unclear whether they have adverse health impacts (Antczak et al., 2013; Prokofyeva et al., 2013). Studies have found increased risk of colorectal cancer and endometrial cancer in heterozygous Blm carriers (Gruber et al., 2002; Schayek et al., 2017) while other studies found no significantly increased prevalence of cancer among carriers (Baris et al., 2007; Cleary et al., 2003; Laitman et al., 2016). This study demonstrates that carriers of BSyn do not appear to have accelerated epigenetic aging compared to BSyn, though we were not able to compare to a population without heterozygous BLM variants. Heterozygous mice also had epigenetic age indistinct from wildtype mice.

This study has important limitations for consideration. Due to the rarity of Bloom syndrome and challenges in obtaining precious human samples, there may be confounding variables in the way that samples were obtained, processed, and stored. In addition, we have limited available data on the study participants about other potential confounders such as smoking packyears. It is known that smoking has a strong effect on GrimAge and PhenoAge and though we lack information on this, it is reasonable to assume that most of the Bloom syndrome participants did not have high smoking pack years since they are children or young adults. Lastly, the Bloom mouse model has known limitations because while it does recapitulate important human Bloom syndrome features such as cancer predisposition and radiation sensitivity, the mouse model is hypomorphic and appears to be fertile, unlike patients with Bloom Syndrome.

Future studies are needed to understand whether accelerated epigenetic aging is associated with cancer or other clinical features seen in BSyn and to fully understand the tissue‐specific differences in methylation in better model systems. Pathways identified in our GREAT analyses provide potential mechanisms driving cancer risk in Bloom Syndrome. These findings are expected to lead to the development of improved biomarkers of disease as well as potential therapeutic opportunities.

4. METHODS

All study participants were consented on protocols approved by the UCLA and Weill Cornell Institutional Review Boards. Blood samples obtained from the Bloom syndrome Registry were collected, processed, and stored in liquid nitrogen until DNA extraction. All other samples were obtained, processed with DNA extraction within 2 days, and then stored at −80 until sequenced. All animal procedures were performed under protocols approved by UCLA animal care and use committees. All mouse samples were obtained, processed with DNA extraction within 2 days, and then stored at −80 until sequenced.

4.1. Methylation analyses

Genomic DNA was extracted from peripheral blood using the PureLink Genomic DNA kit (Thermo Fisher). For human samples, we used the Illumina Infinium Methylation EPIC v2.0 kit (Illumina) and standard Illumina protocols to sequence DNA from BSyn participants and carriers. Briefly, the Illumina bead chip measured bisulfite‐conversion‐based, single‐CpG resolution DNA methylation levels at 866 k CpG sites. The noob normalization method from the minfi R package was used to normalize the human data.

For mouse samples, we used the HorvathMammalMethylChip320 custom mammalian array, which combines a prior custom mammalian array (HorvathMammalMethylChip40) and the 285 k Illumina Mouse Methylation BeadChip (Arneson et al., 2022). The mouse methylation data were normalized using the SeSAMe normalization method (Zhou et al., 2018).

4.2. Epigenetic clock software

The human epigenetic clocks were computed using the online epigenetic clock software to calculate the human epigenetic clocks, https://dnamage.genetics.ucla.edu/new. The mouse clocks were trained and developed in different data sets (“DNA Methylation Age Calculator,”). The underlying software code can be found in the supplements of Mozhui et al. (2022).

4.3. EWAS

The epigenome‐wide association studies (EWAS) were conducted separately in each tissue type using the standardScreeningNumericTrait function from the WGCNA R package (Langfelder & Horvath, 2008). Genotypes were coded as “0” or “1” and used as the trait for the EWAS analysis. For mouse samples, the genotypes were recessively coded as “0” for wildtype and heterozygous mice and “1” for homozygous mice.

4.4. GREAT enrichment analysis

The Genomic Regions Enrichment of Annotations Tool (GREAT) (McLean et al., 2010) was used to identify functional annotations of the top BSyn‐related CpGs from the EWAS analyses through the rGREAT R package (Gu et al., 2014, 2016; Gu & Hubschmann, 2022). By using a custom background consisting of the methylation array for each sample, GREAT performed hypergeometric testing using the top EWAS CpGs as foreground and the methylation array appropriate for human or mouse samples as the background. The top 500 CpGs were used for the mouse samples and the top 1000 CpGs were used for the human samples. Annotations were restricted to those with 5 to 3000 gene sets to avoid multiple comparisons. The settings of “Proximal: 5.0 kb upstream, 1.0 kb downstream, plus Distal: up to 50 kb” were used for the enrichment analysis.

4.5. Mice

Blm m3/m3 mice (strain 01BM1) were procured from the NCI Mouse Repository. Heterozygous mice were bred by crossing Blm m3/m3 and wildtype C57BL/6J mice (strain 000664) from Jackson laboratories. At 70–73 days, male mice were euthanized and whole liver, blood, kidney, heart, skin, and brain tissue were collected for DNA extraction and methylation analyses.

4.6. Statistical analyses

Statistical analyses were performed using Prism GraphPad 9. Data are shown as mean+/− SEM. The associations between human methylation data versus age were modeled using linear regression and quadratic regression. Unpaired t‐tests were used to compare Blm mice to wildtype and heterozygous mice.

AUTHOR CONTRIBUTIONS

JL conducted experiments, sample processing, data analysis, and writing; JZ involved in data analysis and writing. MF, CC, and NK: sample processing, editing. JM involved in data acquisition and editing. AL, AH, and JG involved in data analysis and editing. SH involved in methodology, data analysis, and writing. VYC involved in conceptualization, overall supervision, data acquisition and data interpretation, and writing.

FUNDING INFORMATION

This work was supported by the National Institutes of Health 1K08HL138305 (VYC).

CONFLICT OF INTEREST STATEMENT

Steve Horvath is a founder of the non‐profit Epigenetic Clock Development Foundation which plans to license several patents from his former employer (UC Regents). These patents list SH as inventor. The other authors declare no conflicts of interest.

Supporting information

Figures S1–S2.

ACKNOWLEDGMENTS

We extend thanks to Jeffrey A. Gornbein DrPH for statistical analyses expertise. We thank our excellent core facilities TCGB and UNGC for help with sample processing. We also thank JScreen and the Bloom syndrome Registry for generously providing access to patient samples. We thank the NY Community Trust, which supports the Bloom syndrome Registry. Lastly, we thank the participants and families for their support for research, and who provide inspiration for all our studies.

Lee, J. , Zhang, J. , Flanagan, M. , Martinez, J. A. , Cunniff, C. , Kucine, N. , Lu, A. T. , Haghani, A. , Gordevičius, J. , Horvath, S. , & Chang, V. Y. (2023). Bloom syndrome patients and mice display accelerated epigenetic aging. Aging Cell, 22, e13964. 10.1111/acel.13964

Jamie Lee and Joshua Zhang—co‐first authors.

DATA AVAILABILITY STATEMENT

The mammalian methylation array is available from the Epigenetic Clock Development Foundation (https://clockfoundation.org/).

REFERENCES

  1. Acharya, S. , Kaul, Z. , Gocha, A. S. , Martinez, A. R. , Harris, J. , Parvin, J. D. , & Groden, J. (2014). Association of BLM and BRCA1 during telomere maintenance in ALT cells. PLoS One, 9(8), e103819. 10.1371/journal.pone.0103819 [DOI] [PMC free article] [PubMed] [Google Scholar]
  2. Adams, M. , Jenney, M. , Lazarou, L. , White, R. , Birdsall, S. , Staab, T. , Schindler, D. , & Meyer, S. (2013). Acute myeloid leukaemia after treatment for acute lymphoblastic leukaemia in girl with Bloom syndrome. Journal of Genetic Syndromes & Gene Therapy, 4(8), 1–4. 10.4172/2157-7412.1000177 [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Aktas, D. , Koc, A. , Boduroglu, K. , Hicsonmez, G. , & Tuncbilek, E. (2000). Myelodysplastic syndrome associated with monosomy 7 in a child with Bloom syndrome. Cancer Genetics and Cytogenetics, 116(1), 44–46. 10.1016/s0165-4608(99)00099-0 [DOI] [PubMed] [Google Scholar]
  4. Aljarad, S. , Alhamid, A. , Rahmeh, A. R. , Alibraheem, A. , Wafa, A. , Alachkar, W. , Aljarad, Z. , & Aziz, G. (2018). Bloom syndrome with myelodysplastic syndrome that was converted into acute myeloid leukaemia, with new ophthalmologic manifestations: The first report from Syria. Oxford Medical Case Reports, 2018(12), omy096. 10.1093/omcr/omy096 [DOI] [PMC free article] [PubMed] [Google Scholar]
  5. Antczak, A. , Kluźniak, W. , Wokołorczyk, D. , Kashyap, A. , Jakubowska, A. , Gronwald, J. , Huzarski, T. , Byrski, T. , Dębniak, T. , Masojć, B. , Górski, B. , Gromowski, T. , Nagorna, A. , Gołąb, A. , Sikorski, A. , Słojewski, M. , Gliniewicz, B. , Borkowski, T. , Borkowski, A. , … Sąsiadek, M. M. (2013). A common nonsense mutation of the BLM gene and prostate cancer risk and survival. Gene, 532(2), 173–176. 10.1016/j.gene.2013.09.079 [DOI] [PubMed] [Google Scholar]
  6. Arneson, A. , Haghani, A. , Thompson, M. J. , Pellegrini, M. , Kwon, S. B. , Vu, H. , Maciejewski, E. , Yao, M. , Li, C. Z. , Lu, A. T. , Morselli, M. , Rubbi, L. , Barnes, B. , Hansen, K. D. , Zhou, W. , Breeze, C. E. , Ernst, J. , & Horvath, S. (2022). A mammalian methylation array for profiling methylation levels at conserved sequences. Nature Communications, 13(1), 783. 10.1038/s41467-022-28355-z [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Barefield, C. , & Karlseder, J. (2012). The BLM helicase contributes to telomere maintenance through processing of late‐replicating intermediate structures. Nucleic Acids Research, 40(15), 7358–7367. 10.1093/nar/gks407 [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Baris, H. N. , Kedar, I. , Halpern, G. J. , Shohat, T. , Magal, N. , Ludman, M. D. , & Shohat, M. (2007). Prevalence of breast and colorectal cancer in Ashkenazi Jewish carriers of Fanconi anemia and Bloom syndrome. The Israel Medical Association Journal, 9(12), 847–850. [PubMed] [Google Scholar]
  9. Bennett, R. J. , & Keck, J. L. (2004). Structure and function of RecQ DNA helicases. Critical Reviews in Biochemistry and Molecular Biology, 39(2), 79–97. 10.1080/10409230490460756 [DOI] [PubMed] [Google Scholar]
  10. Bloom, D. (1954). Congenital telangiectatic erythema resembling lupus erythematosus in dwarfs; probably a syndrome entity. A.M.A. American Journal of Diseases of Children, 88(6), 754–758. [PubMed] [Google Scholar]
  11. Brown, G. D. , Willment, J. A. , & Whitehead, L. (2018). C‐type lectins in immunity and homeostasis. Nature Reviews Immunology, 18(6), 374–389. 10.1038/s41577-018-0004-8 [DOI] [PubMed] [Google Scholar]
  12. Chaganti, R. S. , Schonberg, S. , & German, J. (1974). A manyfold increase in sister chromatid exchanges in Bloom's syndrome lymphocytes. Proceedings of the National Academy of Sciences of the United States of America, 71(11), 4508–4512. 10.1073/pnas.71.11.4508 [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Chen, C. L. , Yang, J. S. , Zhang, X. , Tian, T. , Zeng, R. , Zhang, G. H. , & Jia, X. G. (2018). A case report of Werner's syndrome with bilateral juvenile cataracts. BMC Ophthalmology, 18(1), 199. 10.1186/s12886-018-0873-4 [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Cleary, S. P. , Zhang, W. , di Nicola, N. , Aronson, M. , Aube, J. , Steinman, A. , Haddad, R. , Redston, M. , Gallinger, S. , Narod, S. A. , & Gryfe, R. (2003). Heterozygosity for the BLM(ash) mutation and cancer risk. Cancer Research, 63(8), 1769–1771. [PubMed] [Google Scholar]
  15. Cunniff, C. , Bassetti, J. A. , & Ellis, N. A. (2017). Bloom's syndrome: Clinical Spectrum, molecular pathogenesis, and cancer predisposition. Molecular Syndromology, 8(1), 4–23. 10.1159/000452082 [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Cunniff, C. , Djavid, A. R. , Carrubba, S. , Cohen, B. , Ellis, N. A. , Levy, C. F. , Jeong, S. , Lederman, H. M. , Vogiatzi, M. , Walsh, M. F. , & Zauber, A. G. (2018). Health supervision for people with Bloom syndrome. American Journal of Medical Genetics. Part A, 176(9), 1872–1881. 10.1002/ajmg.a.40374 [DOI] [PubMed] [Google Scholar]
  17. Daley, J. M. , Chiba, T. , Xue, X. , Niu, H. , & Sung, P. (2014). Multifaceted role of the topo IIIalpha‐RMI1‐RMI2 complex and DNA2 in the BLM‐dependent pathway of DNA break end resection. Nucleic Acids Research, 42(17), 11083–11091. 10.1093/nar/gku803 [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. de Renty, C. , & Ellis, N. A. (2017). Bloom's syndrome: Why not premature aging?: A comparison of the BLM and WRN helicases. Ageing Research Reviews, 33, 36–51. 10.1016/j.arr.2016.05.010 [DOI] [PMC free article] [PubMed] [Google Scholar]
  19. de Winter, J. P. , & Joenje, H. (2009). The genetic and molecular basis of Fanconi anemia. Mutation Research, 668(1–2), 11–19. 10.1016/j.mrfmmm.2008.11.004 [DOI] [PubMed] [Google Scholar]
  20. DNA Methylation Age Calculator . https://dnamage.genetics.ucla.edu/new
  21. Feng, S. , Qian, X. , Feng, D. , & Zhang, X. (2022). Downregulation of BLM RecQ helicase inhibits proliferation, promotes the apoptosis and enhances the sensitivity of bladder cancer cells to cisplatin. Molecular Medicine Reports, 26(4), 1–10. 10.3892/mmr.2022.12829 [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Fumagalli, M. , Rossiello, F. , Clerici, M. , Barozzi, S. , Cittaro, D. , Kaplunov, J. M. , Bucci, G. , Dobreva, M. , Matti, V. , Beausejour, C. M. , Herbig, U. , Longhese, M. P. , & d'Adda di Fagagna, F. (2012). Telomeric DNA damage is irreparable and causes persistent DNA‐damage‐response activation. Nature Cell Biology, 14(4), 355–365. 10.1038/ncb2466 [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. German, J. , Bloom, D. , Passarge, E. , Fried, K. , Goodman, R. M. , Katzenellenbogen, I. , Laron, Z. , Legum, C. , Levin, S. , & Wahrman, J . (1977). Bloom's syndrome. VI. The disorder in Israel and an estimation of the gene frequency in the Ashkenazim. American Journal of Human Genetics, 29(6), 553–562. [PMC free article] [PubMed] [Google Scholar]
  24. Grasemann, H. , Kremens, B. , & Passarge, E. (1998). Experience treating a patient with Bloom syndrome and acute myelogenous leukemia. Medical and Pediatric Oncology, 30(5), 309–310. [DOI] [PubMed] [Google Scholar]
  25. Gruber, S. B. , Ellis, N. A. , Scott, K. K. , Almog, R. , Kolachana, P. , Bonner, J. D. , Kirchhoff, T. , Tomsho, L. P. , Nafa, K. , Pierce, H. , Low, M. , Satagopan, J. , Rennert, H. , Huang, H. , Greenson, J. K. , Groden, J. , Rapaport, B. , Shia, J. , Johnson, S. , … Offit, K. (2002). BLM heterozygosity and the risk of colorectal cancer. Science, 297(5589), 2013. 10.1126/science.1074399 [DOI] [PubMed] [Google Scholar]
  26. Gu, Z. , Eils, R. , & Schlesner, M. (2016). Complex heatmaps reveal patterns and correlations in multidimensional genomic data. Bioinformatics, 32(18), 2847–2849. 10.1093/bioinformatics/btw313 [DOI] [PubMed] [Google Scholar]
  27. Gu, Z. , Gu, L. , Eils, R. , Schlesner, M. , & Brors, B. (2014). Circlize implements and enhances circular visualization in R. Bioinformatics, 30(19), 2811–2812. 10.1093/bioinformatics/btu393 [DOI] [PubMed] [Google Scholar]
  28. Gu, Z. , & Hubschmann, D. (2022). rGREAT: An R/Bioconductor package for functional enrichment on genomic regions. Bioinformatics, 39, 1–3. 10.1093/bioinformatics/btac745 [DOI] [PMC free article] [PubMed] [Google Scholar]
  29. Gudmundsdottir, K. , & Ashworth, A. (2006). The roles of BRCA1 and BRCA2 and associated proteins in the maintenance of genomic stability. Oncogene, 25(43), 5864–5874. 10.1038/sj.onc.1209874 [DOI] [PubMed] [Google Scholar]
  30. Hannum, G. , Guinney, J. , Zhao, L. , Zhang, L. , Hughes, G. , Sadda, S. , Klotzle, B. , Bibikova, M. , Fan, J. B. , Gao, Y. , Deconde, R. , Chen, M. , Rajapakse, I. , Friend, S. , Ideker, T. , & Zhang, K. (2013). Genome‐wide methylation profiles reveal quantitative views of human aging rates. Molecular Cell, 49(2), 359–367. 10.1016/j.molcel.2012.10.016 [DOI] [PMC free article] [PubMed] [Google Scholar]
  31. Hayflick, L. , & Moorhead, P. S. (1961). The serial cultivation of human diploid cell strains. Experimental Cell Research, 25, 585–621. 10.1016/0014-4827(61)90192-6 [DOI] [PubMed] [Google Scholar]
  32. Helbling‐Leclerc, A. , Garcin, C. , & Rosselli, F. (2021). Beyond DNA repair and chromosome instability‐Fanconi anaemia as a cellular senescence‐associated syndrome. Cell Death and Differentiation, 28(4), 1159–1173. 10.1038/s41418-021-00764-5 [DOI] [PMC free article] [PubMed] [Google Scholar]
  33. Hewitt, G. , Jurk, D. , Marques, F. D. , Correia‐Melo, C. , Hardy, T. , Gackowska, A. , Anderson, R. , Taschuk, M. , Mann, J. , & Passos, J. F. (2012). Telomeres are favoured targets of a persistent DNA damage response in ageing and stress‐induced senescence. Nature Communications, 3, 708. 10.1038/ncomms1708 [DOI] [PMC free article] [PubMed] [Google Scholar]
  34. Horvath, S. (2013). DNA methylation age of human tissues and cell types. Genome Biology, 14(10), R115. 10.1186/gb-2013-14-10-r115 [DOI] [PMC free article] [PubMed] [Google Scholar]
  35. Horvath, S. , Garagnani, P. , Bacalini, M. G. , Pirazzini, C. , Salvioli, S. , Gentilini, D. , di Blasio, A. M. , Giuliani, C. , Tung, S. , Vinters, H. V. , & Franceschi, C. (2015). Accelerated epigenetic aging in down syndrome. Aging Cell, 14(3), 491–495. 10.1111/acel.12325 [DOI] [PMC free article] [PubMed] [Google Scholar]
  36. Horvath, S. , Oshima, J. , Martin, G. M. , Lu, A. T. , Quach, A. , Cohen, H. , Felton, S. , Matsuyama, M. , Lowe, D. , Kabacik, S. , Wilson, J. G. , Reiner, A. P. , Maierhofer, A. , Flunkert, J. , Aviv, A. , Hou, L. , Baccarelli, A. A. , Li, Y. , Stewart, J. D. , … Raj, K. (2018). Epigenetic clock for skin and blood cells applied to Hutchinson Gilford progeria syndrome and ex vivo studies. Aging, 10(7), 1758–1775. 10.18632/aging.101508 [DOI] [PMC free article] [PubMed] [Google Scholar]
  37. Kalb, R. , Neveling, K. , Nanda, I. , Schindler, D. , & Hoehn, H. (2006). Fanconi anemia: Causes and consequences of genetic instability. Genome Dynamics, 1, 218–242. 10.1159/000092510 [DOI] [PubMed] [Google Scholar]
  38. Kaneko, H. , Morimoto, W. , Fukao, T. , Kasahara, K. , & Kondo, N. (2001). Telomerase activity in cell lines and lymphoma originating from Bloom syndrome. Leukemia & Lymphoma, 42(4), 757–760. 10.3109/10428190109099338 [DOI] [PubMed] [Google Scholar]
  39. Kataoka, M. , Kawamura, M. , Hamamoto, K. , Takemiya, M. , & Miki, Y. (1989). Radiation‐induced oesophageal stricture in a case of Bloom's syndrome. Clinical Oncology, 1(1), 47–48. 10.1016/s0936-6555(89)80011-1 [DOI] [PubMed] [Google Scholar]
  40. Laitman, Y. , Boker‐Keinan, L. , Berkenstadt, M. , Liphsitz, I. , Weissglas‐Volkov, D. , Ries‐Levavi, L. , & Friedman, E. (2016). The risk for developing cancer in Israeli ATM, BLM, and FANCC heterozygous mutation carriers. Cancer Genetics, 209(3), 70–74. 10.1016/j.cancergen.2015.12.006 [DOI] [PubMed] [Google Scholar]
  41. Langfelder, P. , & Horvath, S. (2008). WGCNA: An R package for weighted correlation network analysis. BMC Bioinformatics, 9, 559. 10.1186/1471-2105-9-559 [DOI] [PMC free article] [PubMed] [Google Scholar]
  42. Levine, M. E. , Lu, A. T. , Quach, A. , Chen, B. H. , Assimes, T. L. , Bandinelli, S. , Hou, L. , Baccarelli, A. A. , Stewart, J. D. , Li, Y. , Whitsel, E. A. , Wilson, J. G. , Reiner, A. P. , Aviv, A. , Lohman, K. , Liu, Y. , Ferrucci, L. , & Horvath, S. (2018). An epigenetic biomarker of aging for lifespan and healthspan. Aging, 10(4), 573–591. 10.18632/aging.101414 [DOI] [PMC free article] [PubMed] [Google Scholar]
  43. Li, L. , Eng, C. , Desnick, R. J. , German, J. , & Ellis, N. A. (1998). Carrier frequency of the Bloom syndrome blmAsh mutation in the Ashkenazi Jewish population. Molecular Genetics and Metabolism, 64(4), 286–290. 10.1006/mgme.1998.2733 [DOI] [PubMed] [Google Scholar]
  44. Lillard‐Wetherell, K. , Machwe, A. , Langland, G. T. , Combs, K. A. , Behbehani, G. K. , Schonberg, S. A. , German, J. , Turchi, J. J. , Orren, D. K. , & Groden, J. (2004). Association and regulation of the BLM helicase by the telomere proteins TRF1 and TRF2. Human Molecular Genetics, 13(17), 1919–1932. 10.1093/hmg/ddh193 [DOI] [PubMed] [Google Scholar]
  45. Lopez‐Otin, C. , Blasco, M. A. , Partridge, L. , Serrano, M. , & Kroemer, G. (2013). The hallmarks of aging. Cell, 153(6), 1194–1217. 10.1016/j.cell.2013.05.039 [DOI] [PMC free article] [PubMed] [Google Scholar]
  46. Lu, A. T. , Quach, A. , Wilson, J. G. , Reiner, A. P. , Aviv, A. , Raj, K. , Hou, L. , Baccarelli, A. A. , Li, Y. , Stewart, J. D. , Whitsel, E. A. , Assimes, T. L. , Ferrucci, L. , & Horvath, S. (2019). DNA methylation GrimAge strongly predicts lifespan and healthspan. Aging, 11(2), 303–327. 10.18632/aging.101684 [DOI] [PMC free article] [PubMed] [Google Scholar]
  47. Lu, A. T. , Seeboth, A. , Tsai, P. C. , Sun, D. , Quach, A. , Reiner, A. P. , Kooperberg, C. , Ferrucci, L. , Hou, L. , Baccarelli, A. A. , Li, Y. , Harris, S. E. , Corley, J. , Taylor, A. , Deary, I. J. , Stewart, J. D. , Whitsel, E. A. , Assimes, T. L. , Chen, W. , … Horvath, S. (2019). DNA methylation‐based estimator of telomere length. Aging, 11(16), 5895–5923. 10.18632/aging.102173 [DOI] [PMC free article] [PubMed] [Google Scholar]
  48. Lu, R. , O'Rourke, J. J. , Sobinoff, A. P. , Allen, J. A. M. , Nelson, C. B. , Tomlinson, C. G. , Lee, M. , Reddel, R. R. , Deans, A. J. , & Pickett, H. A. (2019). The FANCM‐BLM‐TOP3A‐RMI complex suppresses alternative lengthening of telomeres (ALT). Nature Communications, 10(1), 2252. 10.1038/s41467-019-10180-6 [DOI] [PMC free article] [PubMed] [Google Scholar]
  49. Luo, G. , Santoro, I. M. , McDaniel, L. D. , Nishijima, I. , Mills, M. , Youssoufian, H. , Vogel, H. , Schultz, R. A. , & Bradley, A. (2000). Cancer predisposition caused by elevated mitotic recombination in Bloom mice. Nature Genetics, 26(4), 424–429. 10.1038/82548 [DOI] [PubMed] [Google Scholar]
  50. Maierhofer, A. , Flunkert, J. , Oshima, J. , Martin, G. M. , Haaf, T. , & Horvath, S. (2017). Accelerated epigenetic aging in Werner syndrome. Aging, 9(4), 1143–1152. 10.18632/aging.101217 [DOI] [PMC free article] [PubMed] [Google Scholar]
  51. Malarkannan, S. (2006). The balancing act: Inhibitory Ly49 regulate NKG2D‐mediated NK cell functions. Seminars in Immunology, 18(3), 186–192. 10.1016/j.smim.2006.04.002 [DOI] [PMC free article] [PubMed] [Google Scholar]
  52. McLean, C. Y. , Bristor, D. , Hiller, M. , Clarke, S. L. , Schaar, B. T. , Lowe, C. B. , Wenger, A. M. , & Bejerano, G. (2010). GREAT improves functional interpretation of cis‐regulatory regions. Nature Biotechnology, 28(5), 495–501. 10.1038/nbt.1630 [DOI] [PMC free article] [PubMed] [Google Scholar]
  53. Morales Berstein, F. , McCartney, D. L. , Lu, A. T. , Tsilidis, K. K. , Bouras, E. , Haycock, P. , Burrows, K. , Phipps, A. I. , Buchanan, D. D. , Cheng, I. , PRACTICAL consortium , Martin, R. M. , Davey Smith, G. , Relton, C. L. , Horvath, S. , Marioni, R. E. , Richardson, T. G. , & Richmond, R. C. (2022). Assessing the causal role of epigenetic clocks in the development of multiple cancers: A Mendelian randomization study. eLife, 11. 10.7554/eLife.75374 [DOI] [PMC free article] [PubMed] [Google Scholar]
  54. Mozhui, K. , Lu, A. T. , Li, C. Z. , Haghani, A. , Sandoval‐Sierra, J. V. , Wu, Y. , Williams, R. W. , & Horvath, S. (2022). Genetic loci and metabolic states associated with murine epigenetic aging. eLife, 11. 10.7554/eLife.75244 [DOI] [PMC free article] [PubMed] [Google Scholar]
  55. Nalepa, G. , & Clapp, D. W. (2018). Fanconi anaemia and cancer: An intricate relationship. Nature Reviews. Cancer, 18(3), 168–185. 10.1038/nrc.2017.116 [DOI] [PubMed] [Google Scholar]
  56. Opresko, P. L. , Mason, P. A. , Podell, E. R. , Lei, M. , Hickson, I. D. , Cech, T. R. , & Bohr, V. A. (2005). POT1 stimulates RecQ helicases WRN and BLM to unwind telomeric DNA substrates. The Journal of Biological Chemistry, 280(37), 32069–32080. 10.1074/jbc.M505211200 [DOI] [PubMed] [Google Scholar]
  57. Ou, H. L. , & Schumacher, B. (2018). DNA damage responses and p53 in the aging process. Blood, 131(5), 488–495. 10.1182/blood-2017-07-746396 [DOI] [PMC free article] [PubMed] [Google Scholar]
  58. Prokofyeva, D. , Bogdanova, N. , Dubrowinskaja, N. , Bermisheva, M. , Takhirova, Z. , Antonenkova, N. , Turmanov, N. , Datsyuk, I. , Gantsev, S. , Christiansen, H. , Park‐Simon, T. W. , Hillemanns, P. , Khusnutdinova, E. , & Dörk, T. (2013). Nonsense mutation p.Q548X in BLM, the gene mutated in Bloom's syndrome, is associated with breast cancer in Slavic populations. Breast Cancer Research and Treatment, 137(2), 533–539. 10.1007/s10549-012-2357-1 [DOI] [PubMed] [Google Scholar]
  59. Rezazadeh, S. (2013). On BLM helicase in recombination‐mediated telomere maintenance. Molecular Biology Reports, 40(4), 3049–3064. 10.1007/s11033-012-2379-0 [DOI] [PubMed] [Google Scholar]
  60. Ribezzo, F. , Shiloh, Y. , & Schumacher, B. (2016). Systemic DNA damage responses in aging and diseases. Seminars in Cancer Biology, 37‐38, 26–35. 10.1016/j.semcancer.2015.12.005 [DOI] [PMC free article] [PubMed] [Google Scholar]
  61. Schayek, H. , Laitman, Y. , Katz, L. H. , Pras, E. , Ries‐Levavi, L. , Barak, F. , & Friedman, E. (2017). Colorectal and endometrial cancer risk and age at diagnosis in BLMAsh mutation carriers. The Israel Medical Association Journal, 19(6), 365–367. [PubMed] [Google Scholar]
  62. Schratz, K. E. , Flasch, D. A. , Atik, C. C. , Cosner, Z. L. , Blackford, A. L. , Yang, W. , Gable, D. L. , Vellanki, P. J. , Xiang, Z. , Gaysinskaya, V. , Vonderheide, R. H. , Rooper, L. M. , Zhang, J. , & Armanios, M. (2023). T cell immune deficiency rather than chromosome instability predisposes patients with short telomere syndromes to squamous cancers. Cancer Cell, 41(4), 807–817. 10.1016/j.ccell.2023.03.005 [DOI] [PMC free article] [PubMed] [Google Scholar]
  63. Semenov, M. (2021). Proliferative capacity of adult mouse brain. International Journal of Molecular Sciences, 22(7). 10.3390/ijms22073449 [DOI] [PMC free article] [PubMed] [Google Scholar]
  64. Subramanian, V. , Rodemoyer, B. , Shastri, V. , Rasmussen, L. J. , Desler, C. , & Schmidt, K. H. (2021). Bloom syndrome DNA helicase deficiency is associated with oxidative stress and mitochondrial network changes. Scientific Reports, 11(1), 2157. 10.1038/s41598-021-81075-0 [DOI] [PMC free article] [PubMed] [Google Scholar]
  65. Sugranes, T. A. , Flanagan, M. , Thomas, C. , Chang, V. Y. , Walsh, M. , & Cunniff, C. (2022). Age of first cancer diagnosis and survival in Bloom syndrome. Genetics in Medicine, 24(7), 1476–1484. 10.1016/j.gim.2022.03.008 [DOI] [PubMed] [Google Scholar]
  66. Takemoto, M. , Mori, S. , Kuzuya, M. , Yoshimoto, S. , Shimamoto, A. , Igarashi, M. , Tanaka, Y. , Miki, T. , & Yokote, K. (2013). Diagnostic criteria for Werner syndrome based on Japanese nationwide epidemiological survey. Geriatrics & Gerontology International, 13(2), 475–481. 10.1111/j.1447-0594.2012.00913.x [DOI] [PubMed] [Google Scholar]
  67. Vogel, H. , Lim, D. S. , Karsenty, G. , Finegold, M. , & Hasty, P. (1999). Deletion of Ku86 causes early onset of senescence in mice. Proceedings of the National Academy of Sciences of the United States of America, 96(19), 10770–10775. 10.1073/pnas.96.19.10770 [DOI] [PMC free article] [PubMed] [Google Scholar]
  68. Walsh, M. F. , Chang, V. Y. , Kohlmann, W. K. , Scott, H. S. , Cunniff, C. , Bourdeaut, F. , Molenaar, J. J. , Porter, C. C. , Sandlund, J. T. , Plon, S. E. , Wang, L. L. , & Savage, S. A. (2017). Recommendations for childhood cancer screening and surveillance in DNA repair disorders. Clinical Cancer Research, 23(11), e23–e31. 10.1158/1078-0432.CCR-17-0465 [DOI] [PMC free article] [PubMed] [Google Scholar]
  69. Wu, J. , Lu, L. Y. , & Yu, X. (2010). The role of BRCA1 in DNA damage response. Protein & Cell, 1(2), 117–123. 10.1007/s13238-010-0010-5 [DOI] [PMC free article] [PubMed] [Google Scholar]
  70. Yoshida, R. (2021). Hereditary breast and ovarian cancer (HBOC): Review of its molecular characteristics, screening, treatment, and prognosis. Breast Cancer, 28(6), 1167–1180. 10.1007/s12282-020-01148-2 [DOI] [PMC free article] [PubMed] [Google Scholar]
  71. Yu, C. E. , Oshima, J. , Fu, Y. H. , Wijsman, E. M. , Hisama, F. , Alisch, R. , Matthews, S. , Nakura, J. , Miki, T. , Ouais, S. , Martin, G. M. , Mulligan, J. , & Schellenberg, G. D. (1996). Positional cloning of the Werner's syndrome gene. Science, 272(5259), 258–262. 10.1126/science.272.5259.258 [DOI] [PubMed] [Google Scholar]
  72. Zhou, W. , Triche, T. J., Jr. , Laird, P. W. , & Shen, H. (2018). SeSAMe: Reducing artifactual detection of DNA methylation by Infinium BeadChips in genomic deletions. Nucleic Acids Research, 46(20), e123. 10.1093/nar/gky691 [DOI] [PMC free article] [PubMed] [Google Scholar]
  73. Zvereva, M. I. , Shcherbakova, D. M. , & Dontsova, O. A. (2010). Telomerase: Structure, functions, and activity regulation. Biochemistry, 75(13), 1563–1583. 10.1134/s0006297910130055 [DOI] [PubMed] [Google Scholar]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Figures S1–S2.

Data Availability Statement

The mammalian methylation array is available from the Epigenetic Clock Development Foundation (https://clockfoundation.org/).


Articles from Aging Cell are provided here courtesy of Wiley

RESOURCES