Abstract
Background
The paper presents novel findings of little-known species of rodents, the blind tree mice Typhlomys in Son La Province, Vietnam, with the first morphological and genetic characterisation and taxonomical description of the new species, T.taxuansis. The study also summarises all the data available on this genus species distribution, museum collections and notes on its taxonomy, which are important to establish the proper conservation status of the species. An exhaustive map of the findings is provided, along with a refined taxonomic key for all six currently morphologically characterised species of the genus. It is shown that, based on the data available to date, the genus is still far from complete. Most species, apparently, do not need a special conservation measure; their status may be established as Least Concerns and Near Threatened (B1a+2a) and the current population trend is stable (IUCN).
New information
The paper introduced innovative findings regarding lesser-known rodents, the blind tree mice Typhlomys in Son La Province, Vietnam, along with the primary morphological and genetic identification and taxonomic explanation of the novel species T.taxuansis.
Keywords: Southeast Asia, Vietnam, rodents, taxonomy, biodiversity
Introduction
Platacanthomyidae is a relict rodent family (Musser and Carleton 2005) represented by only two recent genera with 6-7 species (Abramov et al. 2014). For a long time, it was considered an enigmatic family due to the fact that its external morphologies are much like those of dormice (Gliridae), the anatomical structures of the bullae and dentary are more similar to muroids (Miller and Gidley 1918, Musser and Carleton 2005) and their molar occlusal pattern shares a considerable part of features with the Crecitidae (Fejfar and Kalthoff 1999) and Nesomyinae (Ellerman 1940, Ellerman 1949). Their evolutionary relationships have remained uncertain for a long time (Hong 1982) until molecular evidence supported Platacanthomyids as a distinct lineage that composes the most basal clade of Muroidea families (Jansa et al. 2009). Thus, the English common name “pigmy dormice” (Wilson and Cole 2000) as well as the Russian one “Chinese dormouse hamsters” (Sokolov 1984) in this case are obviously misleading. In the latest taxonomic summary of mammals, they are assigned the common name “tree mice” (Giarla 2017), which should be followed today. Taking into consideration its most specific feature, the most common would be the name “blind tree mice” to distinguish it from other groups of arboreal mice.
The type species of the genus, Typhlomyscinereus, was described from Fujian, China (Milne-Edwards 1877) and is now known over a fairly large range in central China (Hong 1982, Wang et al. 1996, Liu et al. 2007, Smith 2008, Cheng et al. 2017). Based on differences in body size and fur colouration, several additional taxonomic entities have been described more recently (Wang et al. 1996, Musser and Carleton 2005) along with a number of related taxa known from isolated highland populations in southern and central China and the Hoang Lien Range in northern Vietnam (Liang 1980, Liu et al. 1984, Liu et al. 2007, Can et al. 2008, Abramov et al. 2012, Abramov et al. 2014). According to a review by Wang et al. (1996), the nominate subspecies T.c.cinereus was found to be distributed in northern Fujian and Zhejiang Provinces and southern Anhui and has also recently been recorded in Guangdong Province, China (Cong et al. 2013). Three other Chinese taxa have restricted ranges. T.c.daloushanensis Wang et Li, 1996, is known from southern Sichuan, Shaanxi, Gansu, Hubei and Guizhou; T.c.guangxiensis Wang et Chen, 1996, is distributed in the southwest of Guangxi; and T.c.jingdongensis Wu et Wang, 1984, was discovered in Yunnan.
The Vietnamese population was initially described by Osgood (1932) as a separate species, T.chapensis, which had long been considered a subspecies of T.cinereus (Corbet and Hill 1991, Wang et al. 1996, Musser and Carleton 2005) until its taxonomic status was restored (Abramov et al. 2014). A recent paper (Cheng et al. 2017) carried out the first successful revision of the genus, based on a combination of morphological and molecular genetic data. The study demonstrated that T.chapensis and T.c.jingdongensis are indistinguishable from each other. Typhlomysc.cinereus and T.c.daloushanensis also show the closest resemblance in dental morphology, but exhibit considerable genetic distances between samples. In a subsequent series of surveys (Hu et al. 2021, Pu et al. 2022), another species was described, along with two more genetic lineages of species rank that still do not have a formal description based on morphological materials. Thus, under the most recent view, the genus comprises five established species, namely cinereus, chapensis, daloushanensis, fengjiensis and nanus. There are also another two putative species, usually called Typhlomys sp. 1 and Typhlomys sp. 2 (Hu et al. 2021), still remaining morphologically unverified (Fig. 1).
Figure 1.
Distribution map for genetically investigated Typhlomys species and lineages.
In spite of these findings, the composition of the genus still cannot be considered completely clear due to the scarcity of museum materials available for study and the obvious fragmentation and disjunctive pattern of the natural area of the genus. Thus, in particular, the southern limit of the distribution of the genus in Indochina and the species composition in Vietnam remain debatable. Little is known about the natural history of these rodents because only a few scientists have been lucky enough to observe them in nature, in their natural habitats in high mountain cloud forests.
Materials and methods
The small terrestrial mammals were trapped by snap traps during one of the recent theriological expeditions organised by the Russian-Vietnamese Tropical Research and Technological Center in Son La Province, Bac Yen District, within Xin Vang, Hang Dong, Ta Xua, Bac Yen, Song Pe, Hong Ngai, Ta Khoa and Hua Nhan communes, within and in the vicinity of Ta Xua Nature Reserve. The field surveys were carried out during the period of 21-30 November 2023.
One individual of Typhlomys (adult female) was obtained on 25 November 2023, in a moist forest in Ta Xua Nature Reserve, 4 km east of Y Xoa Homestay (21,32218 N, 104.495873 E, about 2100 m a.s.l., Fig. 1, point 37). It was used to obtain both morphological (skull and skin) and genetic samples. The whole body of the animal was initially preserved in 70% ethanol, followed by the skull and skin, which were processed for deposit in the Zoological Museum of Moscow State University, Moscow (ZMMU S-210284).
Direct measurements were taken in field and then a set of twenty-three cranial traits were analysed in the laboratory post-skull extraction and boiling. Final skull treatments have been made by larvae of Dermestes sp. obtained from the ZMMU collection, followed by cranial characters taken using digital calipers to the nearest 0.01 mm: Head and body length (LHB), tail length (LT), hind foot length (LHF), length of ear loop (LE), body weight (BW), occipitonasal length (ONL), zygomatic breadth (ZB), interorbital breadth (IB), length of rostrum (LR), breadth of rostrum (BR), breadth of braincase (BBC), height of braincase (HBC), breadth of zygomatic plate (BZP), length of diastema (LD), length of incisive foramina (LIF), breadth of incisive foramina (BIF), length of bony palate (LBP) (palatal bridge), breadth across bony palate at first molars (BBP), postpalatal length (PPL), breadth of mesopterygoid fossa (BMF), length of bulla (LB), crown length of maxillary molar row (CLM1-3), breadth of first upper molar (BM1) crown length of mandibular molar row (CLM1-3), breadth of first lower molar (BM1) following Musser and Newcomb (1983) and Musser et al. (2006).
For comparison, we summarised all data on Typhlomys with genetic species attribution and geographical locality availability, including our current and previously published data (Abramov et al. 2012, Abramov et al. 2014). The total dataset combines 37 points and 74 individuals from Vietnam and China, with 63 individuals attributed to the exact museum voucher or sample (Table 1). We follow the dental nomenclature system of molars proposed by Qiu (1989), who compared both recent and fossil species of Typhlomys.
Table 1.
Geographical locations for Typhlomys sp samples are available (only geographically attributed samples are listed).
| # | Site Sample locality | Latitude (N) | Longitude (E) | Elevation m |
Species | Voucher specimen or tissue sample | Citation |
| 1 | Mt. Qinling, Zhashui County of Shangluo, Shaanxi, China | 33.8 | 109.2 | 1300 | Typhlomysdaloushanensis | (Wu 1990) | |
| 2 | Maozhai Nature Reserve, Sichuan, China | 32.85596 | 10.47216 | 1070 | Typhlomysdaloushanensis | (Liu et al. 2007) | |
| 3 | Mt. Guangwushan, Sichuan, China | 32.57 | 106.74 | Typhlomysdaloushanensis | GWS20210425001 | (Pu et al. 2022) | |
| 4 | Shennongjia forestry region of Hubei,China | 31.54 | 110.40 | 2000-2300 | Typhlomysdaloushanensis | (Liu and Wang 1997) | |
| 5 | Kaixian, Chongqing, China | 31.28 | 108.35 | Typhlomysdaloushanensis | SAF16709 | (Pu et al. 2022) | |
| 6 | Fenjie, Chongqing, China | 30.712946 | 109.562642 | 1880 | Typhlomysfengjiensis | SCNU02580; SCNU02583 | (Pu et al. 2022) |
| 7 | Fenjie, Chongqing, China | 30.662742 | 109.520595 | 1883 | Typhlomysfengjiensis | SCNU02591; SCNU02616 | (Pu et al. 2022) |
| 8 | Shiruguan in Xinglong Town, Fengjie County, Chongqing, China | 30.648639 | 109.489543 | 1579 | Typhlomysfengjiensis | SCNU02544, SCNU02564, SCNU02565 SAF97118, SAF97119 | (Pu et al. 2022) |
| 9 | Fenjie, Chongqing, China | 30.645056 | 109.492861 | 1827 | Typhlomysfengjiensis | SCNU02616; SCNU02615 | (Pu et al. 2022) |
| 10 | Fenjie, Chongqing, China | 30.644861 | 109.491816 | 1857 | Typhlomysfengjiensis | SCNU02564; SCNU02565; SCNU02618; SCNU02623 | (Pu et al. 2022) |
| 11 | Mt, Xingdou, Hubei, China | 30.217 | 108.724 | Typhlomysdaloushanensis | (Pu et al. 2022) | ||
| 12 | Mt.Tianmu, Zhejiang, China | 30.21 | 119.5 | 1100-2300 | Typhlomyscinereus | (Zhuge et al. 1985) | |
| 13 | Mt. Huangshan, Anhui, China | 30.119 | 118.306 | 710 | Typhlomyshuangshanensis | AE1901HS01; AE1902HS02; AE1902HS03 | (Hu et al. 2021) |
| 14 | Badagongshan National Nature Reserve, Hunan, China | 29.65 | 109.83 | Typhlomyscinereus | (Xie et al. 2014) | ||
| 15 | Mt. Jinfo, Chongqing, China | 29.01867 | 107.1905 | 2105 | Typhlomysdaloushanensis | KIZ033551; KIZ033589; KIZ033590; KIZ033594; KIZ033595; KIZ033596 | (Cheng et al. 2017) |
| 16 | Mt. Jinfo, Chongqing, China | 29.00353 | 107.1883 | 1997 | Typhlomysdaloushanensis | KIZ033599; KIZ033600; KIZ033555; KIZ033555; KIZ033556 | (Cheng et al. 2017) |
| 17 | Mt. Jinfo, Chongqing, China | 29.00178 | 107.1891 | 1997 | Typhlomysdaloushanensis | KIZ033552 | (Cheng et al. 2017) |
| 18 | Kuankuoshui of Suiyang County, Guizhou, China | 27.97 | 107.25 | 1600 | Typhlomysdaloushanensis | (Wang et al. 1996) | |
| 19 | Mt. Wuyi, Fujian, China | 27.63675 | 117.9041111 | 400 | Typhlomyscinereus | USNM238223; KIZ:Z201312257 | (Cheng et al. 2017) |
| 20 | Mt. Jiaozi, Yunnan, China | 26.08277778 | 102.84675 | 3252 | Typhlomysnanus | KIZ033585 | (Cheng et al. 2017) |
| 21 | Mt. Jiaozi, Yunnan, China | 26.06661111 | 102.8254444 | 3204 | Typhlomysnanus | KIZ033584; KIZ:033586 | (Cheng et al. 2017) |
| 22 | Libo County of Qiannan, Guizhou, China | 25.35 | 107.92 | 747 | Typhlomys sp. 1 | ROM118593 | (Cheng et al. 2017), (Su et al. 2020) |
| 23 | Mt. Ailao, Yunnan, China | 24.57 | 101.48 | 2572 | Typhlomyschapensis | KIZ033591 | (Cheng et al. 2017) |
| 24 | Mt. Ailao, Yunnan, China | 24.5 | 101.4 | 2791 | Typhlomyschapensis | KIZ031851; KIZ029295 | (Cheng et al. 2017) |
| 25 | Mt. Wuliang, Yunnan, China | 24.35 | 100.7333333 | Typhlomyschapensis | KIZ019150; KIZ019152 | (Cheng et al. 2017) | |
| 26 | Mt. Ailao, Yunnan, China | 24.28419444 | 101.2603889 | 2380 | Typhlomyschapensis | KIZ033589 | (Cheng et al. 2017) |
| 27 | Mt.Daming, Guangxi, China | 23.75 | 108.517 | 1775 | Typhlomyscinereus | (Liang 1980) | |
| 28 | Binlin, Guangxi, China | 23.5 | 108.5 | Typhlomyscinereus | (Wang et al. 1996) | ||
| 29 | Mt. Laojun, Yunnan, China | 23.3 | 103.95 | 2043 | Typhlomys sp. 2 | 1503001 | (Cheng et al. 2017) |
| 30 | Mt. Dawei, Yunnan, China | 23.03661111 | 103.5271667 | 2013 | Typhlomys sp. 2 | 1112103 | (Cheng et al. 2017) |
| 31 | Mt. Dawei, Yunnan, China | 22.91330556 | 103.6977222 | 2038 | Typhlomysnanus | KIZ:028335; KIZ:028336 | (Cheng et al. 2017) |
| 32 | Mt. Huanglian, Yunnan, China | 22.87033333 | 103.2355556 | 2232 | Typhlomyschapensis | KIZ033588 | (Cheng et al. 2017) |
| 33 | Mt, Huanglian, Yunnan, China | 22.87 | 102.28 | 1955 | Typhlomyschapensis | KIZ033587 | (Cheng et al. 2017) |
| 34 | Mt, Huanglian, Yunnan, China | 22.87 | 103.24 | 2232 | Typhlomyschapensis | KIZ:033588 | (Cheng et al. 2017) |
| 35 | Mt. Huanglian, Yunnan, China | 22.867 | 102.2838333 | 1955 | Typhlomyschapensis | KIZ033587 | (Cheng et al. 2017) |
| 36 | Mt. Phan Xi Pang, Lao Cai, Vietnam | 22.35 | 103.77 | 1926 | Typhlomyschapensis | ZIN101563; ZIN1015634; ZIN1015635; ZIN1015636; ZIN101567; ZIN99914; ZIN99916; ZIN100882; ZIN100883; ZIN100411 | (Abramov et al. 2014), (Cheng et al. 2017) |
| 37 | Ta Xua Nature Reserve, Son La, Vietnam | 21.32218 | 104.495873 | 2100 | Typhlomystaxuansis | ZMMU S-210284 | new original data |
For genetic analyses, small pieces of liver were stored in 96% molecular-grade ethanol and used for DNA extraction. The total genomic DNA was extracted using a routine phenol/chloroform/proteinase K protocol (Kocher et al. 1989, Sambrook et al. 1989). The individual has been genotyped by partial Cyt b (398–1140 bp positions), the COI gene (680 bp) and the growth hormone receptor partial sequence gene (GHR, 815 bp) and analysed together with all homologous sequences available in the GenBank (Abramov et al. 2014, Cheng et al. 2017, Hu et al. 2021, Pu et al. 2022). Universal routine PCR protocols have been used to amplify mtDNA fragments as follows: initial denaturation for 1 min 30 sec at 95°C, denaturation for 30 sec at 95°C, annealing for 1 min at 52°C and elongation for 45 sec at 72°C, followed by terminal elongation for 3 min at 72°C. The PCR reaction was performed in a 25µl volume that contained 2.5–3 ml of 10x standard PCR buffer (Fermentas), 50 mM of each dNTP, 2 mM of MgCl2, 10 pmol of each primer, 1 unit of Taq DNA polymerase (Fermentas) and 20–50 ng of total DNA template per tube. The Cyt b gene was amplified directly using primer pairs L14724 (Irwin et al. (1991), 5'-CGAAGCTTGATATGAAAAACCTCGTTG-3') and H15915, 5’-GGAATTCATCTCTCCGGTTTACAAGAC-3' (Kocher et al. 1989). For the COI gene, we sequenced the one-time routine BOLD primers LCO1490 and HCO2198 (5'-GGTCAACAAATCATAAAGATATTGG-3' and 5'-TAAACTTCAGGGTGACCAAAAAATCA-3') and protocols have been used as explained in Hebert et al. (2003). The GHR gene was amplified by the two-round nested scheme explained in Jansa et al. (2009) with primers GHRF1, 5’-GGRAARTTRGAGGAGGRGAACACMATCTT; GHRF50, 5’-TTCTAYARYGATGACTCYTGGGT-3'; GHR930R, 5’-RTAGCCACANGANGAGAGRAA-3'; and GHRendAlt, 5’-GATTTTGTTCAGTTGGTCTGTGCTCAC. The double-stranded DNA products were directly sequenced in both directions using an ABI PRISM 3730xl Genetic Analyzer (Applied Biosystems, USA) and the BigDye® Terminator v.3.1 Cycle Sequencing Kit (Life Technologies Corporation, Carlsbad, CA, USA) in agreement with the manufacturer’s protocol. Sequences obtained were deposited to GenBank database under IDs PP987021-PP987022 and PP987159.
A number of external GenBank deposited sequences (KX778415-KX778416, KC209551-KC209552, KX778366-KX778385, KX778340-KX778360, KX778394-KX778414, KX778361-KX778362; MT219901-MT219904, MT232968-MT232971; OL753459-OL753468, OL693252-OL693261, OL753439-OL753448, OL691088- OL691090) were used as a united dataset. Therefore, this dataset combines all the bulk of genetic information currently available for this genus for all specific populations currently discovered. We also used a number of outgroups exactly as in the paper Hu et al. (2021), namely Jaculusjaculus (KM397186, AJ416890, KM397231), Myospalaxaspalax (AF326272, KP724691, GQ272599) and Rattusrattus (HM217733, EU273707, AM910976) for full integrity.
Sequencing analyses, based on a concatenated 3643-bp-long sequence and individual Cyt b, COI and GHR genes, were conducted in MEGA X (Kumar et al. 2018). The phylogeny was inferred by the Maximum Likelihood Method and the General Time Reversible Model (Nei and Kumar 2000) as they are the most complex, universal and need no initial presumption about the codon evolution mode. The tree with the highest log likelihood (-5938.78) was used. The initial tree for the heuristic search was obtained automatically by applying the Neighbour-Joining and BioNJ algorithms to a matrix of pairwise distances estimated using the Maximum Composite Likelihood (MCL) approach and then selecting the topology with a superior log-likelihood value. A discrete Gamma distribution was used to model evolutionary rate differences amongst sites (5 categories +G parameter = 1.235). The rate variation model allowed for some sites to be evolutionarily invariable ([+I], 45.564% sites). All positions with less than 95% site coverage were eliminated, i.e. fewer than 5% alignment gaps, missing data and ambiguous bases were allowed at any position (partial deletion option), resulting in a total of 1943 positions in the final dataset. Bootstrap values were calculated with 10,000 iterations. Estimates of evolutionary divergence within Typhlomys species have been made by the Cyt b gene, as Nei and Kumar (2000).
Results
The Typhlomys specimen recovered from Ta Xua (Fig. 2) exhibited a specific pattern of craniodental morphology, clearly distinct from that of the Lao Cai population referred to as T.chapensis studied previously (Abramov et al. 2012, Abramov et al. 2014). This applies in particular to the structure of the occlusive pattern of the molars and the general structure of the skull, which is discussed in detail below.
Figure 2.
A new species of Typhlomys from Ta Xua Nature Reserve, specimen BY-60, adult female, external view. Photo of Alexander E. Balakirev. A Dorsal view; B Ventral view; C Lateral view; D Belly, enlarged scale; E Head and backside, enlarged scale; F Distal half of tail with brush; G Hind foot, dorsal view.
The genetic analysis carried out allowed us to establish the level of its genetic uniqueness and its place in the overall diversity of Typhlomys. The phylogenetic tree constructed from the concatenated sequences of the three genes is shown in Fig. 3.
Figure 3.
Phylogenetic tree (ML, Cyt b, COI, GHR concatenated dataset, GTR+G+I) for species and genetic lineages of Typhlomys. Bootstrap values over nodes; most ambiguous nodes are marked by black dotes.
Our aims did not include constructing a detailed phylogeny and estimating divergence times; the analysis was performed for taxonomic purposes to accurately assign genetic attributions to the samples. As can be seen, the phylogenetic reconstruction data clearly indicate that the obtained sample belongs to the cinereus species group, while the characteristic genetic distances clearly reach the species level (Table 2) and are in the range of 0.105-0.196 (Cyt b, K2P). Genetic trees obtained for individual genes have the same topology, differing only in the level of support. Surprisingly, out of the established species of the genus, the closest relative is the recently described T.fengjiensis. It can also be seen that the closest related sequence available corresponds to one of the Typhlomys sp. 2 samples (Hu et al. 2021) from Mt. Laojun, Yunnan, China, N23.30 E103.95 (points 29 in Fig. 1). Their divergence level is 0.025 (K2P), so there is a reason to suppose that they belong to the same species.
Table 2.
Estimates of evolutionary divergence within Typhlomys species as accessed by the Cyt b gene (Nei and Kumar 2000). Standard error estimates are shown above the diagonal. Analyses were conducted using the Maximum Composite Likelihood model (Tamura et al. 2004).
| Intergroup divergence | Intragroup divergence | ||||||||||
| T.daloushanensis | T.chapensis | T.cinereus | T.fengjiensis | T.nanus | T. sp. 1 | T. sp. 2 (4-1) | T.taxuansis | ||||
| T.daloushanensis | 0.0177 | 0.0159 | 0.0127 | 0.0186 | 0.0180 | 0.0142 | 0.0141 | T.daloushanensis | 0.0188 | 0.0030 | |
| T.chapensis | 0.2031 | 0.0165 | 0.0176 | 0.0131 | 0.0039 | 0. 0168 | 0.0202 | T.chapensis | 0.0117 | 0.0024 | |
| T.cinereus | 0.1967 | 0.2127 | 0.0136 | 0.0163 | 0.0172 | 0.0148 | 0.0160 | T.cinereus | 0.0970 | 0.0089 | |
| T.fengjiensis | 0.1263 | 0.1947 | 0.1666 | 0.0180 | 0.0179 | 0.0128 | 0.0118 | T.fengjiensis | 0.0080 | 0.0019 | |
| T.nanus | 0.2130 | 0.1410 | 0.2086 | 0.2044 | 0.0129 | 0.0171 | 0.0198 | T.nanus | 0.0466 | 0.0063 | |
| T. sp. 1 | 0.1971 | 0.0193 | 0.2086 | 0.1874 | 0.1322 | 0.0175 | 0.0200 | T. sp. 1 | 0.0000 | 0.0000 | |
| T. sp. 2 (voucher 4-1) | 0.1335 | 0.1759 | 0.1729 | 0.1099 | 0.1870 | 0.1768 | 0.0138 | T. sp. 2 (voucher 4-1) | n/c | n/c | |
| T.taxuansis | 0.1290 | 0.2007 | 0.1775 | 0.1050 | 0.2037 | 0.1906 | 0,1179 | T.taxuansis | 0.0934 | 0.0165 | |
Data resources
The prepared skull and flat skin of the holotype are deposited in the Zoological Museum of Moscow State University, Moscow (ZMMU S-210284). Genetic data for new samples are deposited in GenBank under IDs PP987021-PP987022 and PP987159.
Taxon treatments
Typhlomys taxuansis sp. nov.
B35EB204-2034-5FFB-A16C-95F95F930450
B6350DEA-E691-45AC-A1EF-C8BC73327045
Holotype: ZMMU S-210284 skull and flat skin (field number: BY-60), adult female (Figs. 2 and 4) collected on 25 November 2023, by Alexander E. Balakirev and Bui Xuan Phuong. The specimen deposited at the Zoological Museum of Moscow State University, Moscow, Russia, is shown in Fig. 4.
Figure 4.
The holotype of Typhlomystaxuansis, skull, ZMMU S-210284 (field number: BY-60, adult female). A Dorsal view; B Ventral view; C Lateral view; D Lower jaw, dorsal view; E Lower jaw, lateral view; H M1-M3 upper molars, occlusal pattern, enlarged scale; I m1-m3 lower molars, occlusal pattern, enlarged scale.
Materials
Type status: Holotype. Occurrence: catalogNumber: ZMMU S-210284; recordNumber: BY-60; recordedBy: Alexander E. Balakirev; individualCount: 1; sex: female; lifeStage: adult; occurrenceStatus: present; preparations: skin; skull; disposition: in collection; associatedSequences: GenBank: PP987021-PP987022 and PP987159; occurrenceID: D570D565-0C0F-566C-8D44-DE2C3E91708F; Taxon: scientificName: Typhlomystaxuansis; Location: higherGeographyID: Ta Xua Nature Reserve, prov Son La, Vietnam; higherGeography: Asia; continent: Asia; country: Vietnam; countryCode: VN; stateProvince: Son La; county: Bac Yen; locality: 4 km east from Y Xoa Homestay; verbatimLocality: 4 km east from Y Xoa Homestay; minimumElevationInMeters: 2000; maximumElevationInMeters: 2200; decimalLatitude: 21.32218; decimalLongitude: 104.495873; geodeticDatum: WGS84
Description
Measurements of holotype (mm): BM = 21.10 g; HB = 85.0; TL = 117.0; HL = 25.0; EL = 18.0; ONL = 25.92; ZB = 13.85; IB = 5.59; LR = 8.34; BR = 3.67; BBC = 11.49; HBC = 8.55; ZBP = 1.78; LD = 7.08; LIF = 1.53; BIF = 1.87; LBP = 11.27; BBP = 4.00; PPL = 9.21; BMF = 1.78; LB = 3.42; CLM1-3 = 4.14; BM1 = 1.18; CLM1-3 = 4.29; and BM1 = 1.04.
One of the larger species within Typhlomys (HB = 85; ONL = 25.92). Vibrissae very long white; ears prominent, almost bare; eyes vestigial (Fig. 2). Dorsal body colouration: dark grey; entire ventral body from chin to anus, including inner side of limbs to wrists and knees; greyish due to dark grey hair base and white tip. Fingers four at fore-limbs and five on hind ones; hind feet slender and elongated (HL = 25 mm); plantar palms of all limbs light brown; fingers pale whitish; skin on dorsal surfaces of hind feet brownish, covered with slender hair. Tail long, well exceeding head and body length (TL = 117 mm), with scale rings; proximal third of the tail covered with extremely short and sparse hairs, back part is covered with longer hairs than the ventral side; and the distal half of the tail has tufts of long, dark grey hairs with no white inclusions.
The braincase is generally dome-shaped and relatively high due to its large size (HBC = 8.55 mm). The rostrum is straight beyond the upper incisors. Tympanic bullas are small. Zygomatic plate narrow; zygomatic arch strait, not incurvate on approximately equal thickness throughout its length. The incisive openings are small, rounded and have a pointed anterior edge. The bony palate is pierced by two pairs of additional symmetrical foramina, with the first pair, located under the rostrum, being approximately half as long as the posterior pair, located between the teeth. Diagonal bone trabeculae are clearly visible deep inside them. Dental formula is usual for the genus 1.0.0.3/1.0.0.3 = 16. M1, with almost equally wide anteroloph and posteroloph. M1 antherofosette is divided into two separate parts (Fig. 4H). The first molars of the upper jaws have six dark fossette-shaped structures; the first lower molars have only five dark fossette-shaped structures; the second upper and lower ones have four fosettes; and the third molars have two and four. The mesofossette on M1 is open on only the lingual sides. M2 with anterofossette, divided by a complete, well developed mesofosette; m1 with two antherofossettids and a closed mesofossettid. Anterofossettids are present in m2, but relatively short. m3 mesolophid has a crescent shape due to the facet protruding from the lingual side (Fig. 4H).
Diagnosis
The new species, morphologically, is most similar to T.daloushanensis, but can be distinguished, based on its dental and skull morphology. Based on genetic diversity, the most relative genetic lineage is T.fengjiensis. It obviously differs from geographically most adjacent species T.chapensis and T.nanus by a more flattened braincase; from all known Typhlomys species, except for T.cinereus, by zygomatic arch with deeper incurve; from T.cinereus by mesofossette on M1 open on both buccal and lingual sides rather than open on the buccal side only; and from T.nanus by posterofossettid on M1 present. The new species further differs from other species, except T.daloushanensis, by anterofossette on M2 present.
Etymology
The specific Latin name taxuansis composed as an adjective refers to its type locality in Ta Xua Nature Reserve, Son La Province, Bac Yen District, Vietnam. Due to the sampling location being the southernmost location currently known for this genus, we suggest “southern blind tree mouse” as the English common name.
Distribution
The new species is currently obtained only from the type locality, but may also be distributed in the adjacent mountainous areas in the northern-western part of Vietnam, north of the Da River. A close genetic similarity between the specimens and the Yunnan findings was found. Additionally, the genetic relationship with the cinereus group species, widespread in central and eastern China, suggests that the range of this species may extend eastwards to the provinces of north-eastern Vietnam, as well as the Chinese Province of Guanxi. Based on the ecological characteristics of habitats, it may also be distributed southwards, for example, at the Annamite Range, both on the Laotian and Vietnamese sides, but there are still no notes on its findings to the south from the Da River.
Ecology
The specimen investigated was captured in moist, misty mountainous forests at mid-altitudes (2000–2200 m a.s.l.). Sympatric species include Neotetracussinensis, Eothenomysmiletus, Dremomysornatus, Dremomysgularis, Niviventerlotipes, Niviventerfulvescens, Muspahari and Leopoldamysedwardsi, these being mostly the species of the Chinese mountain faunistic complex.
Conservation
The genus Typhlomys has recently been assessed for the IUCN Red List of Threatened Species in 2016. The only species recognised there to date, Typhlomyscinereus, is listed as Least Concern (Smith 2016). This is obviously outdated information and does not reflect current taxonomy improvements in this group. In fact, data on the conservation status of this rather exotic group of rodents is almost non-existent for most species. Here, we will try to close this gap to some extent, relying on modern data.
Based on literature sources and original data, we can compose a distribution map for the genus Typhlomys as shown in Fig. 1. The range area of the species, estimated from an ellipse containing all reliable finds, may range from about 1.27 mln km2 for T.cinereus with T.huangshanensis, 330000 km2 for T.daloushanensis, 60000–70000 for T.chapensis and T.nanus, about 12000 km2 for T.taxuansis to only 80–100 km2 for T.fenjiensis. At the same time, the real area of mountain forest within this zone is 10–20 times smaller. This circumstance is obviously of the utmost importance for environmental protection.
In agreement with IUCN rules (Anonymous 2001, Anonymous 2012), there are five quantitative criteria that are used to determine whether a taxon is threatened or not and, if threatened, to which category of threat it belongs (Critically Endangered, Endangered or Vulnerable). These five criteria are: population size reduction (past, present and/or projected); geographic range size and fragmentation, few locations, decline or fluctuations; small and declining population size and fragmentation, fluctuations or a few subpopulations; a very small population or very restricted distribution; and quantitative analysis of extinction risk.
Of the five circumstances given, only geographic range size and fragmentation match these species’ situation. The data currently available does not suggest either a very small population or any decline or reduction in population. For T.cinereus proper and T.daloushanensis, their natural ranges and the number of localities where the animals are listed allow for confirmation of their Least Concern (LC) status. For another, more profound inspection of needs. In agreement with IUCN rules, to qualify for criterion geographic range size and fragmentation, the general distributional threshold must first be met for one of the categories of threat, either in terms of extent of occurrence (EOO) or area of occupancy (AOO). The taxon must then meet at least two of the three options listed for this criterion. The options are: (a) severely fragmented or known to exist in no more than “X” locations; (b) continuing decline; or (c) extreme fluctuation (IUCN Anonymous 2001, IUCN Anonymous 2012). Of these criteria, only B1a is obviously applicable for all other species — fragmentation of the area due to the natural fragmentation of landscapes. It should be noticed that, within the category, T.nanus, T.taxuansis and T.fengjiensis could formally be classified as VU (Vulnerable) according to criterion B1 (Extent of Occurrence EOO) and, according to subcategory B2a (Area of Occupancy AOO). For T.fengjiensis, it is possible even to be Endangered due to the less than ten closely situated localities currently identified. However, there is still a little information about the natural situation to date.
For T.taxuansis, the range area of the species, estimated from an ellipse containing known finds, including closely-related Chinese samples, covers about 12,000 km2. At the same time, the real area of cloud forest vegetation within this zone is 10–20 times smaller. On the other hand, there is every reason to believe that the species is distributed much more widely, out of cloud forests and may well be in karst vegetation covering many hundreds of square kilometres in the regions of northern Indochina and southern China. It should also be noted that, in accordance with the IUCN rules, in the absence of any plausible threat to the taxon, the term "location" cannot be used and the subcriteria that refer to the number of locations will not be met. As far as is known to date, all the species apparently show neither a noticeable decrease in abundance (b) nor significant fluctuations (c) in relation to the size of the range or the number of individuals.
Thus, we believe that the category Least Concern may be applied to T.cinereus and T.daloushanensis, along with Near Threatened B1a+2a and that the current population trend is stable for T.chapensis, T.nanus, T.taxuansis and T.fengjiensis species. The main threats to its conservation are not primarily linked to direct impacts and population reduction, but rather to its association with specific and highly- specialised habitat types, such as high-level mountain and cloud forest vegetation, which may limit the potential distribution for many species.
Taxon discussion
The molecular dating analyses suggested that divergences within Typhlomys started during the middle or late Miocene. Divergence in the Miocene is usually considered a genus-level diversification (Jansa et al. 2009). In China, remains of several species of blind tree mice have been found in the Upper Miocene (Qiu 1989, Qiu and Ni 2019), Pliopleistocene (Qiu Z and Jin C-Z 2017), Lower Pleistocene (Zheng 1993,Fejfar and Kalthoff 1999, Zheng 2004, Jin et al. 2009, Wang et al. 2014) and lower Upper Pleistocene. This timing is congruent with fossil records of Platacanthomyidae (Qiu 1989). A special pattern of tooth morphology was also found in four congeneric fossil species from the late Miocene to the Pleistocene in China (Qiu 1989, Zheng 1993). However, the recent species available only differed from each other by appearance, size and tender features of pelage colour. The patterns and structures of their molar teeth for many species are rather similar. Considerable differences in tooth size and tooth crown height were observed in fossil species, but the patterns and structures of teeth have remained stable since the early Pleistocene. However, as we can see, in a number of cases, quite distinct morphological features of the structure of the chewing surface can be detected, marking the species.
The palaeontological history of Typhlomys in Vietnam has been largely unknown until recently, but this year a fossil of Typhlomysstegodontis sp. nov. was described, based on a maxillary fragment and isolated teeth from the Middle Pleistocene Tham Hai cave locality in northern Vietnam (Lang Son Province, about 200 km NE from Ta Xua). This first finding of the fossil Platacanthomyidae in Vietnam fills the Middle Pleistocene gap in the palaeontological record of the family (Lopatin 2024). Interestingly, the parafossette M1 in the holotype of the fossil T.stegodontis is obviously bifurcated, with an anterolingual branch reaching the enamel wall of the tooth. This structure is largely similar to the completely isolated additional fossette region observed in M1 T.taxuansis, constituting one of its unique features. This similarity, as well as the geographical location of the finding, suggests an evolutionary relationship between these taxa. Unfortunately, the third upper molar of the fossil species has not yet been discovered, but surveys continue.
The distribution of the different Typhlomys species demonstrates a distinct geographic pattern, which could be partly due to the complex topography and low dispersal ability of many animals (Fu and Zeng 2008, Zhou et al. 2012, Cheng et al. 2017, Hinckley et al. 2020). On the other hand, in Yunnan, scattered mountain ranges with elevations over 3000 m., such as the Wuyi and Huangshan Mountains, form patches of “sky islands” favoured allopatry in isolated areas (McCormack et al. 2009). It should be noted that, taking into account new data, these islands of high-mountain habitats are occupied by representatives of the chapensis group and the cinereus group, which are mainly distributed in the east and often occupy lower-lying habitats. In addition, mountains provide a wide altitudinal range that helps buffer climate changes and has provided initially continuously suitable habitats for Typhlomys since the early Late Miocene (Wu et al. 2013, He et al. 2019). This may indicate that, during the Late Miocene, when the most rapid speciation within the genus Typhlomys occurred, this taxon may have been a less pronounced montane group. Some of the originally temperate montane populations could have been locked within a lower montane region and were forced to adapt to an increasingly high-altitude climate as the mountains rose and montane vegetation belts moved in the Pleistocene. This may explain the proximity of ranges with true allopatry of T.nanus, T.cheapens, T.taxuansis and several as yet undescribed species and forms in the mountains of Yunnan and northern Vietnam. Lately, the complex topography of Yunnan mountains may facilitate allopatric speciation by physical isolation, eventually resulting in a series of endemic species with narrow isolated areas. Up till now, there are still a number of populations without genetic attribution from many regions (Pu et al. 2022). Thus, the number of species of the genus Typhlomys in China and Vietnam still requires further profound biodiversity surveys, taxonomic and phylogenetic studies, which may result in many interesting findings.
Identification Keys
Key to the established species of Typhlomys
| 1 | Braincase flattened, molars wide, anterofossette on M1 relatively wide, mesofossettid on m1 closed | 2 |
| – | Braincase dome-shaped, molars narrow, anterofossette on M1 narrow, mesofossettid on m1 open buccally | 4 |
| 2 | ONL < 23.0 mm, LD < 11.0 mm, dorsal surface of hind feet covered with blackish hairs | T.cinereus* |
| – | ONL > 23.7 mm, LD > 11.4 mm, hind feet dorsal surface yellowish-white or dark | 3 |
| 3 | ONL > 23.7 mm, LD > 11.4 mm, hind feet dorsal surface yellowish | T.daloushanensis |
| – | ONL even larger, 25.38 ± 0.77 mm, Zygomatic arch incurved at posterior two-fifths, anterior part narrower than posterior part. Dorsal surfaces of hind feet brown, covered with dark hair | T.fengjiensis |
| 4 | ONL > 21.6 mm, LD > 10.6 mm, IB > 5.0 mm, posterofossettid and posterolophid on m1 present | 5 |
| – | ONL < 22.2 mm, LD < 10.2 mm, IB < 4.9 mm, posterofossettid absent on m1, anterolingual end of m2 fillet-shaped | T.nanus |
| 5 | There are three linear parallel fossettes on m3, m1 antherofosette single, linear | T.chapensis** |
| – | m3 mesolophid has a crescent shape due to the facet protruding from the lingual side, so there are only two fossettes present. m1 antherofosette is divided into two separate parts. Dorsal surfaces of hind feet are brown; the tail brush is without whitish hairs. | T.taxuansis |
Notes:* T.cinereus includes T.c.jingdongensis as a younger synonym. **: T.chapensis includes T.c.guangxiensis as a younger synonym.
Supplementary Material
Acknowledgements
This study was realised with the support of the Joint Russian-Vietnamese Tropical Research and Technological Center, Hanoi, Vietnam under programme E.1.2. task 4. We thank the local authorities of the Bac Yen District of Son La Province, Vietnam, for accompanying our surveys and Dr. Sergei V. Kruskop and Ms. Yulia A. Ermilina (from the Zoological Museum of Moscow State University, Moscow, Russia) for giving access to the collections under their care. We also thank Dr. Dinh The Dung and Dr. Tran Huu Coi (both from the Joint Vietnam-Russia Tropical Research and Technological Center, Hanoi, Vietnam), who put considerable effort into the expedition preparations. Pham Mai Phuong MD helped us prepare a distribution map. We are also very grateful to Dr. Nedko Nedyalkov and anonymous reviewer for their helpful and constructive comments on an earlier version of the manuscript.
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