Skip to main content
Biochemical Journal logoLink to Biochemical Journal
. 1982 Oct 15;208(1):77–82. doi: 10.1042/bj2080077

Purification of a protein having pore forming activity from the rat liver mitochondrial outer membrane.

M Lindén, P Gellerfors, B D Nelson
PMCID: PMC1153931  PMID: 6297464

Abstract

A protein with pore-forming activity has been isolated from the outer membrane of rat liver mitochondria. The purification involves sucrose gradient centrifugation, differential centrifugation in the presence of Triton X-100, and DEAE-Sepharose and CM-Sepharose chromatography. The yield of the purified protein was approx. 2% of the total outer membrane proteins. The protein, when inserted into soya bean phospholipid vesicles, increases the [3H]sucrose permeability of the vesicles but had no effect on the permeability of high-molecular-weight [14C]dextran (Mr 70 000). The protein is very active, since as little as 3-4 micrograms of protein per mg of phospholipid is required for the complete release of [3H]sucrose from the vesicles. Sucrose diffusion channels could not be reconstituted with other membrane proteins such as rat liver cytochrome oxidase or cytochrome b5. Purified pore protein revealed a single band of apparent Mr 30000 when resolved by sodium dodecyl sulphate/polyacrylamide-gel electrophoresis. This polypeptide could be further resolved by isoelectric focusing into a major (pI7.9) and two relatively minor (pI7.6 and 7.2) components. Proteolytic mapping with V8 proteinase from Staphylococcus aureus suggests that these probably represent a single component showing charge heterogeneity. The reason for the charge heterogeneity is not known. The amino acid composition of the protein revealed 47.8% polar amino acids with a relatively high lysine content.

Full text

PDF
81

Images in this article

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Brierley G., O'Brien R. L. Compartmentation of heart mitochondria. II. Mitochondrial adenine nucleotides and the action of atractyloside. J Biol Chem. 1965 Nov;240(11):4532–4539. [PubMed] [Google Scholar]
  2. Capaldi R. A., Vanderkooi G. The low polarity of many membrane proteins. Proc Natl Acad Sci U S A. 1972 Apr;69(4):930–932. doi: 10.1073/pnas.69.4.930. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Chen R., Krämer C., Schmidmayr W., Chen-Schmeisser U., Henning U. Primary structure of major outer-membrane protein I (ompF protein, porin) of Escherichia coli B/r. Biochem J. 1982 Apr 1;203(1):33–43. doi: 10.1042/bj2030033. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Cleveland D. W., Fischer S. G., Kirschner M. W., Laemmli U. K. Peptide mapping by limited proteolysis in sodium dodecyl sulfate and analysis by gel electrophoresis. J Biol Chem. 1977 Feb 10;252(3):1102–1106. [PubMed] [Google Scholar]
  5. Colombini M. A candidate for the permeability pathway of the outer mitochondrial membrane. Nature. 1979 Jun 14;279(5714):643–645. doi: 10.1038/279643a0. [DOI] [PubMed] [Google Scholar]
  6. Colombini M. Structure and mode of action of a voltage dependent anion-selective channel (VDAC) located in the outer mitochondrial membrane. Ann N Y Acad Sci. 1980;341:552–563. doi: 10.1111/j.1749-6632.1980.tb47198.x. [DOI] [PubMed] [Google Scholar]
  7. Elhammer A., Dallner G., Omura T. Glycosylation of rat liver cytochrome b5 on the ribosomal level. Biochem Biophys Res Commun. 1978 Oct 16;84(3):572–580. doi: 10.1016/0006-291x(78)90744-1. [DOI] [PubMed] [Google Scholar]
  8. Freitag H., Neupert W., Benz R. Purification and characterisation of a pore protein of the outer mitochondrial membrane from Neurospora crassa. Eur J Biochem. 1982 Apr;123(3):629–636. doi: 10.1111/j.1432-1033.1982.tb06578.x. [DOI] [PubMed] [Google Scholar]
  9. Gellerfors P., Lindén M. Biogenesis of the outer mitochondrial membrane in isolated rat hepatocytes. FEBS Lett. 1981 May 5;127(1):91–93. doi: 10.1016/0014-5793(81)80348-1. [DOI] [PubMed] [Google Scholar]
  10. Hancock R. E., Decad G. M., Nikaido H. Identification of the protein producing transmembrane diffusion pores in the outer membrane of Pseudomonas aeruginosa PA01. Biochim Biophys Acta. 1979 Jul 5;554(2):323–331. doi: 10.1016/0005-2736(79)90373-0. [DOI] [PubMed] [Google Scholar]
  11. Laemmli U. K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 1970 Aug 15;227(5259):680–685. doi: 10.1038/227680a0. [DOI] [PubMed] [Google Scholar]
  12. Luckey M., Nikaido H. Diffusion of solutes through channels produced by phage lambda receptor protein of Escherichia coli: inhibition by higher oligosaccharides of maltose series. Biochem Biophys Res Commun. 1980 Mar 13;93(1):166–171. doi: 10.1016/s0006-291x(80)80261-0. [DOI] [PubMed] [Google Scholar]
  13. Mannella C. A., Bonner W. D., Jr X-ray diffraction from oriented outer mitochondrial membranes. Detection of in-plane subunit structure. Biochim Biophys Acta. 1975 Dec 1;413(2):226–233. doi: 10.1016/0005-2736(75)90106-6. [DOI] [PubMed] [Google Scholar]
  14. Nakae T. Identification of the outer membrane protein of E. coli that produces transmembrane channels in reconstituted vesicle membranes. Biochem Biophys Res Commun. 1976 Aug 9;71(3):877–884. doi: 10.1016/0006-291x(76)90913-x. [DOI] [PubMed] [Google Scholar]
  15. O'Farrell P. H. High resolution two-dimensional electrophoresis of proteins. J Biol Chem. 1975 May 25;250(10):4007–4021. [PMC free article] [PubMed] [Google Scholar]
  16. O'Farrell P. Z., Goodman H. M., O'Farrell P. H. High resolution two-dimensional electrophoresis of basic as well as acidic proteins. Cell. 1977 Dec;12(4):1133–1141. doi: 10.1016/0092-8674(77)90176-3. [DOI] [PubMed] [Google Scholar]
  17. Parsons D. F., Williams G. R., Chance B. Characteristics of isolated and purified preparations of the outer and inner membranes of mitochondria. Ann N Y Acad Sci. 1966 Jul 14;137(2):643–666. doi: 10.1111/j.1749-6632.1966.tb50188.x. [DOI] [PubMed] [Google Scholar]
  18. Peterson G. L. A simplification of the protein assay method of Lowry et al. which is more generally applicable. Anal Biochem. 1977 Dec;83(2):346–356. doi: 10.1016/0003-2697(77)90043-4. [DOI] [PubMed] [Google Scholar]
  19. Pfaff E., Klingenberg M., Heldt H. W. Unspecific permeation and specific exchange of adenine nucleotides in liver mitochondria. Biochim Biophys Acta. 1965 Jun 15;104(1):312–315. doi: 10.1016/0304-4165(65)90258-8. [DOI] [PubMed] [Google Scholar]
  20. Roos N., Benz R., Brdiczka D. Identification and characterization of the pore-forming protein in the outer membrane of rat liver mitochondria. Biochim Biophys Acta. 1982 Apr 7;686(2):204–214. doi: 10.1016/0005-2736(82)90114-6. [DOI] [PubMed] [Google Scholar]
  21. WERKHEISER W. C., BARTLEY W. The study of steady-state concentrations of internal solutes of mitochondria by rapid centrifugal transfer to a fixation medium. Biochem J. 1957 May;66(1):79–91. doi: 10.1042/bj0660079. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Wielburski A., Kuźela S., Nelson B. D. Studies on the assembly of cytochrome oxidase in isolated rat hepatocytes. Biochem J. 1982 Apr 15;204(1):239–245. doi: 10.1042/bj2040239. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Wojtczak L., Zaluska H. On the impermeability of the outer mitochondrial membrane to cytochrome c. I. Studies on whole mitochondria. Biochim Biophys Acta. 1969 Oct 14;193(1):64–72. doi: 10.1016/0005-2736(69)90059-5. [DOI] [PubMed] [Google Scholar]
  24. Zalman L. S., Nikaido H., Kagawa Y. Mitochondrial outer membrane contains a protein producing nonspecific diffusion channels. J Biol Chem. 1980 Mar 10;255(5):1771–1774. [PubMed] [Google Scholar]

Articles from Biochemical Journal are provided here courtesy of The Biochemical Society

RESOURCES