Abstract
The Mutator transposable element system of maize has been used to isolate mutations at many different genes. Six different classes of Mu transposable elements have been identified. An important question is whether particular classes of Mu elements insert into different genes at equivalent frequencies. To begin to address this question, we used a small number of closely related Mutator plants to generate multiple independent mutations at two different genes. The overall mutation frequency was similar for the two genes. We then determined what types of Mu elements inserted into the genes. We found that each of the genes was preferentially targeted by a different class of Mu element, even when the two genes were mutated in the same plant. Possible explanations for these findings are discussed. These results have important implications for cloning Mu-tagged genes as other genes may also be resistant or susceptible to the insertion of particular classes of Mu elements.
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Selected References
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- Barker R. F., Thompson D. V., Talbot D. R., Swanson J., Bennetzen J. L. Nucleotide sequence of the maize transposable element Mul. Nucleic Acids Res. 1984 Aug 10;12(15):5955–5967. doi: 10.1093/nar/12.15.5955. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bennetzen J. L., Swanson J., Taylor W. C., Freeling M. DNA insertion in the first intron of maize Adh1 affects message levels: cloning of progenitor and mutant Adh1 alleles. Proc Natl Acad Sci U S A. 1984 Jul;81(13):4125–4128. doi: 10.1073/pnas.81.13.4125. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Brown W. E., Robertson D. S., Bennetzen J. L. Molecular analysis of multiple mutator-derived alleles of the bronze locus of maize. Genetics. 1989 Jun;122(2):439–445. doi: 10.1093/genetics/122.2.439. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Chandler V. L., Hardeman K. J. The Mu elements of Zea mays. Adv Genet. 1992;30:77–122. doi: 10.1016/s0065-2660(08)60319-3. [DOI] [PubMed] [Google Scholar]
- Chandler V., Rivin C., Walbot V. Stable non-mutator stocks of maize have sequences homologous to the Mu1 transposable element. Genetics. 1986 Nov;114(3):1007–1021. doi: 10.1093/genetics/114.3.1007. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Chen C. H., Oishi K. K., Kloeckener-Gruissem B., Freeling M. Organ-specific expression of maize Adh1 is altered after a Mu transposon insertion. Genetics. 1987 Jul;116(3):469–477. doi: 10.1093/genetics/116.3.469. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Chomet P., Lisch D., Hardeman K. J., Chandler V. L., Freeling M. Identification of a regulatory transposon that controls the Mutator transposable element system in maize. Genetics. 1991 Sep;129(1):261–270. doi: 10.1093/genetics/129.1.261. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Dooner H. K., Nelson O. E. Genetic control of UDPglucose:flavonol 3-O-glucosyltransferase in the endosperm of maize. Biochem Genet. 1977 Jun;15(5-6):509–519. doi: 10.1007/BF00520194. [DOI] [PubMed] [Google Scholar]
- Fedoroff N. V., Furtek D. B., Nelson O. E. Cloning of the bronze locus in maize by a simple and generalizable procedure using the transposable controlling element Activator (Ac). Proc Natl Acad Sci U S A. 1984 Jun;81(12):3825–3829. doi: 10.1073/pnas.81.12.3825. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Feinberg A. P., Vogelstein B. A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal Biochem. 1983 Jul 1;132(1):6–13. doi: 10.1016/0003-2697(83)90418-9. [DOI] [PubMed] [Google Scholar]
- Fleenor D., Spell M., Robertson D., Wessler S. Nucleotide sequence of the maize Mutator element, Mu8. Nucleic Acids Res. 1990 Nov 25;18(22):6725–6725. doi: 10.1093/nar/18.22.6725. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Freeling M., Bennett D. C. Maize Adh1. Annu Rev Genet. 1985;19:297–323. doi: 10.1146/annurev.ge.19.120185.001501. [DOI] [PubMed] [Google Scholar]
- Hama C., Ali Z., Kornberg T. B. Region-specific recombination and expression are directed by portions of the Drosophila engrailed promoter. Genes Dev. 1990 Jul;4(7):1079–1093. doi: 10.1101/gad.4.7.1079. [DOI] [PubMed] [Google Scholar]
- Hardeman K. J., Chandler V. L. Characterization of bz1 mutants isolated from mutator stocks with high and low numbers of Mu1 elements. Dev Genet. 1989;10(6):460–472. doi: 10.1002/dvg.1020100607. [DOI] [PubMed] [Google Scholar]
- Hershberger R. J., Warren C. A., Walbot V. Mutator activity in maize correlates with the presence and expression of the Mu transposable element Mu9. Proc Natl Acad Sci U S A. 1991 Nov 15;88(22):10198–10202. doi: 10.1073/pnas.88.22.10198. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Larson R. L., Coe E. H., Jr Gene-dependent flavonoid glucosyltransferase in maize. Biochem Genet. 1977 Feb;15(1-2):153–156. doi: 10.1007/BF00484558. [DOI] [PubMed] [Google Scholar]
- McLaughlin M., Walbot V. Cloning of a mutable bz2 allele of maize by transposon tagging and differential hybridization. Genetics. 1987 Dec;117(4):771–776. doi: 10.1093/genetics/117.4.771. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Nash J., Luehrsen K. R., Walbot V. Bronze-2 gene of maize: reconstruction of a wild-type allele and analysis of transcription and splicing. Plant Cell. 1990 Nov;2(11):1039–1049. doi: 10.1105/tpc.2.11.1039. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Patterson G. I., Harris L. J., Walbot V., Chandler V. L. Genetic analysis of B-Peru, a regulatory gene in maize. Genetics. 1991 Jan;127(1):205–220. doi: 10.1093/genetics/127.1.205. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Qin M. M., Ellingboe A. H. A transcript identified by MuA of maize is associated with Mutator activity. Mol Gen Genet. 1990 Dec;224(3):357–363. doi: 10.1007/BF00262429. [DOI] [PubMed] [Google Scholar]
- Qin M. M., Robertson D. S., Ellingboe A. H. Cloning of the Mutator transposable element MuA2, a putative regulator of somatic mutability of the a1-Mum2 allele in maize. Genetics. 1991 Nov;129(3):845–854. doi: 10.1093/genetics/129.3.845. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ralston E. J., English J. J., Dooner H. K. Sequence of three bronze alleles of maize and correlation with the genetic fine structure. Genetics. 1988 May;119(1):185–197. doi: 10.1093/genetics/119.1.185. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Talbert L. E., Patterson G. I., Chandler V. L. Mu transposable elements are structurally diverse and distributed throughout the genus Zea. J Mol Evol. 1989 Jul;29(1):28–39. doi: 10.1007/BF02106179. [DOI] [PubMed] [Google Scholar]
- Taylor L. P., Walbot V. Isolation and characterization of a 1.7-kb transposable element from a mutator line of maize. Genetics. 1987 Oct;117(2):297–307. doi: 10.1093/genetics/117.2.297. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Veit B., Vollbrecht E., Mathern J., Hake S. A tandem duplication causes the Kn1-O allele of Knotted, a dominant morphological mutant of maize. Genetics. 1990 Jul;125(3):623–631. doi: 10.1093/genetics/125.3.623. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Walbot V. Reactivation of Mutator transposable elements of maize by ultraviolet light. Mol Gen Genet. 1992 Sep;234(3):353–360. doi: 10.1007/BF00538694. [DOI] [PubMed] [Google Scholar]
- Walbot V. The Mutator transposable element family of maize. Genet Eng (N Y) 1991;13:1–37. doi: 10.1007/978-1-4615-3760-1_1. [DOI] [PubMed] [Google Scholar]
- Werr W., Frommer W. B., Maas C., Starlinger P. Structure of the sucrose synthase gene on chromosome 9 of Zea mays L. EMBO J. 1985 Jun;4(6):1373–1380. doi: 10.1002/j.1460-2075.1985.tb03789.x. [DOI] [PMC free article] [PubMed] [Google Scholar]