Abstract
EBP (emopamil-binding protein) is a high-affinity binding protein for [3H]emopamil and belongs to the family of so-called sigma receptors. Mutations that disrupt EBP's 3beta-hydroxysteroid sterol delta8-delta7 isomerase activity (EC 5.3.3.5) impair cholesterol biosynthesis and cause X-chromosomal dominant chondrodysplasia punctata. We identified a human cDNA for a novel EBPL (EBP-like protein) with a calculated mass of 23.2 kDa. Amino acid sequence alignments and phylogenetic analysis revealed that EBPL is distantly related to EBP (31% identity and 52% similarity) and found in animals but not in plants. EBPL is encoded by four exons on human chromosome 13q14.2 covering 30.7 kb, and a partially processed EBPL pseudogene was found on 16q21. The EBPL mRNA was expressed ubiquitously and most abundant in liver, lung and kidney. Upon heterologous expression in yeast EBPL had no detectable 3beta-hydroxysteroid sterol delta8-delta7 isomerase and sigma-ligand-binding activity. Nine out of ten amino acid residues essential for catalytic activity of EBP were conserved in EBPL. Replacement of the only differing residue (EBP-Y111W) reduced catalytic activity of EBP. Transfer of the divergent residue from EBP to EBPL (EBPL-W91Y) and chimaerization of EBP and EBPL at various positions failed to restore catalytic activity of EBPL. Chemical cross-linking induced homodimerization of EBPL and EBP. Whereas mevinolin increased the mRNA for EBP and DHCR7 (delta7-sterol reductase) in HepG2 cells, it had no effect on mRNAs for EBPL and sigma1 receptor, indicating that EBP and EBPL expression are not co-ordinated. We propose that EBPL has a yet-to-be-discovered function other than cholesterol biosynthesis.
Full Text
The Full Text of this article is available as a PDF (393.2 KB).
Selected References
These references are in PubMed. This may not be the complete list of references from this article.
- Ashman W. H., Barbuch R. J., Ulbright C. E., Jarrett H. W., Bard M. Cloning and disruption of the yeast C-8 sterol isomerase gene. Lipids. 1991 Aug;26(8):628–632. doi: 10.1007/BF02536427. [DOI] [PubMed] [Google Scholar]
- Aughton David J., Kelley Richard I., Metzenberg Aida, Pureza Vincent, Pauli Richard M. X-linked dominant chondrodysplasia punctata (CDPX2) caused by single gene mosaicism in a male. Am J Med Genet A. 2003 Jan 30;116A(3):255–260. doi: 10.1002/ajmg.a.10852. [DOI] [PubMed] [Google Scholar]
- Aydar Ebru, Palmer Christopher P., Klyachko Vitaly A., Jackson Meyer B. The sigma receptor as a ligand-regulated auxiliary potassium channel subunit. Neuron. 2002 Apr 25;34(3):399–410. doi: 10.1016/s0896-6273(02)00677-3. [DOI] [PubMed] [Google Scholar]
- Bae S., Seong J., Paik Y. Cholesterol biosynthesis from lanosterol: molecular cloning, chromosomal localization, functional expression and liver-specific gene regulation of rat sterol delta8-isomerase, a cholesterogenic enzyme with multiple functions. Biochem J. 2001 Feb 1;353(Pt 3):689–699. doi: 10.1042/0264-6021:3530689. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Braverman N., Lin P., Moebius F. F., Obie C., Moser A., Glossmann H., Wilcox W. R., Rimoin D. L., Smith M., Kratz L. Mutations in the gene encoding 3 beta-hydroxysteroid-delta 8, delta 7-isomerase cause X-linked dominant Conradi-Hünermann syndrome. Nat Genet. 1999 Jul;22(3):291–294. doi: 10.1038/10357. [DOI] [PubMed] [Google Scholar]
- Dussossoy D., Carayon P., Belugou S., Feraut D., Bord A., Goubet C., Roque C., Vidal H., Combes T., Loison G. Colocalization of sterol isomerase and sigma(1) receptor at endoplasmic reticulum and nuclear envelope level. Eur J Biochem. 1999 Jul;263(2):377–386. doi: 10.1046/j.1432-1327.1999.00500.x. [DOI] [PubMed] [Google Scholar]
- Felsenstein J. An alternating least squares approach to inferring phylogenies from pairwise distances. Syst Biol. 1997 Mar;46(1):101–111. doi: 10.1093/sysbio/46.1.101. [DOI] [PubMed] [Google Scholar]
- Fitzky B. U., Witsch-Baumgartner M., Erdel M., Lee J. N., Paik Y. K., Glossmann H., Utermann G., Moebius F. F. Mutations in the Delta7-sterol reductase gene in patients with the Smith-Lemli-Opitz syndrome. Proc Natl Acad Sci U S A. 1998 Jul 7;95(14):8181–8186. doi: 10.1073/pnas.95.14.8181. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gogarten J. P., Olendzenski L. Orthologs, paralogs and genome comparisons. Curr Opin Genet Dev. 1999 Dec;9(6):630–636. doi: 10.1016/s0959-437x(99)00029-5. [DOI] [PubMed] [Google Scholar]
- Grebenok R. J., Ohnmeiss T. E., Yamamoto A., Huntley E. D., Galbraith D. W., Della Penna D. Isolation and characterization of an Arabidopsis thaliana C-8,7 sterol isomerase: functional and structural similarities to mammalian C-8,7 sterol isomerase/emopamil-binding protein. Plant Mol Biol. 1998 Nov;38(5):807–815. doi: 10.1023/a:1006028623875. [DOI] [PubMed] [Google Scholar]
- Hanner M., Moebius F. F., Flandorfer A., Knaus H. G., Striessnig J., Kempner E., Glossmann H. Purification, molecular cloning, and expression of the mammalian sigma1-binding site. Proc Natl Acad Sci U S A. 1996 Jul 23;93(15):8072–8077. doi: 10.1073/pnas.93.15.8072. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hanner M., Moebius F. F., Weber F., Grabner M., Striessnig J., Glossmann H. Phenylalkylamine Ca2+ antagonist binding protein. Molecular cloning, tissue distribution, and heterologous expression. J Biol Chem. 1995 Mar 31;270(13):7551–7557. doi: 10.1074/jbc.270.13.7551. [DOI] [PubMed] [Google Scholar]
- Hayashi T., Su T. P. Regulating ankyrin dynamics: Roles of sigma-1 receptors. Proc Natl Acad Sci U S A. 2001 Jan 9;98(2):491–496. doi: 10.1073/pnas.98.2.491. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hedges S. Blair. The origin and evolution of model organisms. Nat Rev Genet. 2002 Nov;3(11):838–849. doi: 10.1038/nrg929. [DOI] [PubMed] [Google Scholar]
- Hellewell S. B., Bruce A., Feinstein G., Orringer J., Williams W., Bowen W. D. Rat liver and kidney contain high densities of sigma 1 and sigma 2 receptors: characterization by ligand binding and photoaffinity labeling. Eur J Pharmacol. 1994 Jun 15;268(1):9–18. doi: 10.1016/0922-4106(94)90115-5. [DOI] [PubMed] [Google Scholar]
- Herman G. E. X-Linked dominant disorders of cholesterol biosynthesis in man and mouse. Biochim Biophys Acta. 2000 Dec 15;1529(1-3):357–373. doi: 10.1016/s1388-1981(00)00160-8. [DOI] [PubMed] [Google Scholar]
- Jackson M. R., Nilsson T., Peterson P. A. Identification of a consensus motif for retention of transmembrane proteins in the endoplasmic reticulum. EMBO J. 1990 Oct;9(10):3153–3162. doi: 10.1002/j.1460-2075.1990.tb07513.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kelley R. I. Diagnosis of Smith-Lemli-Opitz syndrome by gas chromatography/mass spectrometry of 7-dehydrocholesterol in plasma, amniotic fluid and cultured skin fibroblasts. Clin Chim Acta. 1995 Apr 30;236(1):45–58. doi: 10.1016/0009-8981(95)06038-4. [DOI] [PubMed] [Google Scholar]
- Kim J. H., Lee J. N., Paik Y. K. Cholesterol biosynthesis from lanosterol. A concerted role for Sp1 and NF-Y-binding sites for sterol-mediated regulation of rat 7-dehydrocholesterol reductase gene expression. J Biol Chem. 2001 Mar 13;276(21):18153–18160. doi: 10.1074/jbc.M101661200. [DOI] [PubMed] [Google Scholar]
- Kyte J., Doolittle R. F. A simple method for displaying the hydropathic character of a protein. J Mol Biol. 1982 May 5;157(1):105–132. doi: 10.1016/0022-2836(82)90515-0. [DOI] [PubMed] [Google Scholar]
- Liu X. Y., Dangel A. W., Kelley R. I., Zhao W., Denny P., Botcherby M., Cattanach B., Peters J., Hunsicker P. R., Mallon A. M. The gene mutated in bare patches and striated mice encodes a novel 3beta-hydroxysteroid dehydrogenase. Nat Genet. 1999 Jun;22(2):182–187. doi: 10.1038/9700. [DOI] [PubMed] [Google Scholar]
- Milunsky Jeff M., Maher Thomas A., Metzenberg Aida B. Molecular, biochemical, and phenotypic analysis of a hemizygous male with a severe atypical phenotype for X-linked dominant Conradi-Hunermann-Happle syndrome and a mutation in EBP. Am J Med Genet A. 2003 Jan 30;116A(3):249–254. doi: 10.1002/ajmg.a.10849. [DOI] [PubMed] [Google Scholar]
- Moebius F. F., Hanner M., Knaus H. G., Weber F., Striessnig J., Glossmann H. Purification and amino-terminal sequencing of the high affinity phenylalkylamine Ca2+ antagonist binding protein from guinea pig liver endoplasmic reticulum. J Biol Chem. 1994 Nov 18;269(46):29314–29320. [PubMed] [Google Scholar]
- Moebius F. F., Reiter R. J., Bermoser K., Glossmann H., Cho S. Y., Paik Y. K. Pharmacological analysis of sterol delta8-delta7 isomerase proteins with [3H]ifenprodil. Mol Pharmacol. 1998 Sep;54(3):591–598. doi: 10.1124/mol.54.3.591. [DOI] [PubMed] [Google Scholar]
- Moebius F. F., Soellner K. E., Fiechtner B., Huck C. W., Bonn G., Glossmann H. Histidine77, glutamic acid81, glutamic acid123, threonine126, asparagine194, and tryptophan197 of the human emopamil binding protein are required for in vivo sterol delta 8-delta 7 isomerization. Biochemistry. 1999 Jan 19;38(3):1119–1127. doi: 10.1021/bi981804i. [DOI] [PubMed] [Google Scholar]
- Moebius F. F., Striessnig J., Glossmann H. The mysteries of sigma receptors: new family members reveal a role in cholesterol synthesis. Trends Pharmacol Sci. 1997 Mar;18(3):67–70. doi: 10.1016/s0165-6147(96)01037-1. [DOI] [PubMed] [Google Scholar]
- Roberti Rita, Bennati Anna Maria, Galli Giovanni, Caruso Donatella, Maras Bruno, Aisa Cristina, Beccari Tommaso, Della Fazia Maria Agnese, Servillo Giuseppe. Cloning and expression of sterol Delta 14-reductase from bovine liver. Eur J Biochem. 2002 Jan;269(1):283–290. doi: 10.1046/j.0014-2956.2001.02646.x. [DOI] [PubMed] [Google Scholar]
- Silve S., Dupuy P. H., Ferrara P., Loison G. Human lamin B receptor exhibits sterol C14-reductase activity in Saccharomyces cerevisiae. Biochim Biophys Acta. 1998 Jun 15;1392(2-3):233–244. doi: 10.1016/s0005-2760(98)00041-1. [DOI] [PubMed] [Google Scholar]
- Silve S., Dupuy P. H., Labit-Lebouteiller C., Kaghad M., Chalon P., Rahier A., Taton M., Lupker J., Shire D., Loison G. Emopamil-binding protein, a mammalian protein that binds a series of structurally diverse neuroprotective agents, exhibits delta8-delta7 sterol isomerase activity in yeast. J Biol Chem. 1996 Sep 13;271(37):22434–22440. doi: 10.1074/jbc.271.37.22434. [DOI] [PubMed] [Google Scholar]
- Zhang M. Q. Statistical features of human exons and their flanking regions. Hum Mol Genet. 1998 May;7(5):919–932. doi: 10.1093/hmg/7.5.919. [DOI] [PubMed] [Google Scholar]