Skip to main content
Mycology logoLink to Mycology
. 2025 May 27;17(1):2493072. doi: 10.1080/21501203.2025.2493072

Taxonomic contributions to Pleosporales and Kirschsteiniotheliales from the Xizang Autonomous Region, China

Shu-Cheng He a,b, Kevin D Hyde a,b,c,✉, Ruvishika S Jayawardena b, Vinodhini Thiyagaraja a, Dhanushka N Wanasinghe d,e, Yun-Wei Zhao a,f, Zhi-Yang Wang a,g, Tong Cai h, Yan-Yan Yang a,b, F Al-Otibi c, Zhuliang Yang a,✉, Qi Zhao a,✉
PMCID: PMC13007439  PMID: 41878510

ABSTRACT

The Xizang Autonomous Region, China, is a key ecological security barrier, renowned for its rich biodiversity and unique resources. It supports diverse life forms, including fungi, which are vital for ecological balance and the restoration of the region’s ecosystems. This study presents the results of a microfungal survey conducted on the Plateau, focusing on the orders Pleosporales and Kirschsteiniotheliales within the class Dothideomycetes. Based on morphological characteristics and multi-gene (ITS, LSU, SSU, tef1, tub2, and rpb2) phylogeny analyses, we report the discovery of 10 new taxa, including one new genus Neotriplosphaeria and nine new species, Kirschsteiniothelia linzhiensis, K. yadongensis, Neotriplosphaeria yadongensis, Periconia linzhiensis, Tetraploa linzhiensis, Torula dingjieensis, T. yadongensis, Trichobotrys motuoensis, Triseptatospora yadongensis, and one new host record Periconia spodiopogonis. The findings provide valuable insights into the morphological and phylogenetic relationships of these fungi, highlighting the Plateau’s significant role in fungal diversity. This study enriches our understanding of fungal biodiversity in extreme environments and underscores the importance of continued exploration in this region.

KEYWORDS: 10 new taxa, Dothideomycetes, phylogeny, taxonomy, saprobic

1. Introduction

Xizang Autonomous Region, China, as an important national ecological security barrier, is one of the richest regions in the world in terms of biodiversity and unique biological resources. It is called a rare “green gene bank” and “natural science museum” in the world (Wang et al. 2023b). It provides a good living and reproduction space for all kinds of animals, plants, and fungi (Yang et al. 2017; Zhan et al. 2022). As a large group of eukaryotic organisms, fungi are a crucial part of the biodiversity of the plateau and play an important role in the ecological balance and restoration of the region (Yang et al. 2010). In the past years, especially from 2010 to 2024, researchers have carried out large-scale investigations and research on fungi in the Qinghai-Xizang Plateau, and have achieved gratifying and important results (Huang et al. 2015; Su et al. 2015; Ren et al. 2016; Timdal et al. 2016; Zhao et al. 2016; Chen et al. 2017, 2020; Shi et al. 2018; Pem et al. 2019, 2024; Phookamsak et al. 2019; Hyde et al. 2020, 2021; Boonmee et al. 2021; Chethana et al. 2021; Liu et al. 2022; Ma et al. 2023, 2025; Xu et al. 2023a, 2023b, 2024a, 2024b; He et al. 2024a; Wang et al. 2024a, 2024b; Phurbu et al. 2024). However, the remarkable species profusion within the region implies that a considerable number of fungi have yet to be identified.

Pleosporales, one of the largest orders within the class Dothideomycetes, was formally introduced by Barr (1987). It is a highly diverse order, currently encompassing 91 families and 653 genera (Hyde et al. 2024b). Members of Pleosporales are primarily characterised by their production of perithecial ascomata, which are flask-shaped fruiting bodies that typically possess a papillate, ostioles, the asexual morph being mainly coelomycetous and hyphomycetous (Hyde et al. 2013; Hongsanan et al. 2020; Pem et al. 2024). Pleosporales fungi have a global distribution in various ecosystems, ranging from terrestrial to aquatic environments (Hongsanan et al. 2020). They exhibit a high abundance in temperate regions and have been identified in soils, decaying wood, and plant debris (Hongsanan et al. 2020). In addition, some species of Pleosporales were reported as plant pathogens that can cause diseases in economically important crops, such as Alternaria, Bipolaris, Leptosphaeria, Phaeosphaeria, and Pyrenophora (Tanaka et al. 2015; El-Demerdash 2018; Jayawardena et al. 2019a, 2019b, 2022, 2025; Bhunjun et al. 2020). Kirschsteiniotheliales was introduced by Hernández-Restrepo et al. (2017) based on phylogenetic analysis to accommodate Kirschsteiniotheliaceae, with Kirschsteiniothelia as the type genus. Kirschsteiniotheliales currently encompasses one family and two incertae sedis genera (Hyde et al. 2024b).

Supported by the Second Tibetan Plateau Scientific Expedition and Research Program, seven field trips were carried out in the southeast of Xizang Autonomous Region, China (He et al. 2023, 2024b; Thiyagaraja et al. 2024) and more than 26 specimens of Pleosporales and Kirschsteiniotheliales were collected. In this paper, we used morphological data together with phylogenetic analysis of the internal transcribed spacer region (ITS), the large subunit rDNA (LSU), the beta-tubulin (tub2), the translation elongation factor 1-α (tef1) gene, and RNA polymerase II second-largest subunit (rpb2) to assess the systematic position of these specimens.

2. Materials and methods

2.1. Collection, fungal isolation, and morphology

Specimens were collected from Xizang Autonomous Region, China, following the methods of He et al. (2024b). The specimens were observed under a NIKON MODEL C-PSN Series dissecting stereo microscope (Nikon, Japan). Using a surgical needle transferred into a clean slide and photographed with the NIKON ECLIPSE Ni-U microscope imaging system (Nikon, Japan), observations of conidiophores, conidiogenous cells, and conidia were carried out. A photoplate was made using Adobe Photoshop CC 2019. The fungal structures were measured using Image Frame Work software. Pure cultures were obtained via single spore isolation using potato dextrose agar (PDA) as described in Senanayake et al. (2020) and incubated at 25 °C for one week. The pure cultures were deposited at the Kunming Institute of Botany Culture Collection (KUNCC). Specimens were deposited at the Herbarium of Cryptogams Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China (KUN-HKAS). Facesoffungi and Index Fungorum numbers were registered following the protocol described in Jayasiri et al. (2015) and Index Fungorum in 2025, respectively.

2.2. DNA extraction, PCR amplification, and sequencing

The mycelia growing on a Potato Dextrose Agar (PDA) plate were used to extract DNA using the Trilief™ Plant Genomic DNA Kit (Tsingke Biological Technology Co., Ltd. in Beijing, China). When the fungi did not germinate or grow in culture, DNA was directly extracted using a DNA extraction kit (E.Z.N.A.® Forensic DNA kit, D3591-01, Omega Bio-Tek), following the manufacturer instructions (Telle and Thines 2008). The primer pairs ITS5/ITS4 (White et al. 1990), NS1/NS4 (White et al. 1990), LR0R/LR5 (Vilgalys and Hester 1990), T1/T22 (O’Donnell and Cigelnik 1997), EF1-983F/EF1-2218 R (Carbone and Kohn 1999), and fRPB2-5F/fRPB2-7cR (Liu et al. 1999) were used for amplification of the internal transcribed spacer region ITS1-5.8S-ITS2 (ITS), the large subunit rDNA (LSU), the beta-tubulin (tub2), the translation elongation factor 1-α (tef1) gene, and RNA polymerase II second-largest subunit (rpb2), respectively. The polymerase chain reaction (PCR) reaction was performed in a 25 μL reaction volume, comprising 21 μL PCR Mix (2× Rapid Taq Master Mix, Vazyme Biotech Co., Ltd., Nanjing, China), 1 μL of each primer, 2 μL DNA template (Table 1). The PCR products were visualised using agarose gel electrophoresis. The materials together with the targeted bands were sent to Sangon Biotech Co. Ltd., Kunming, China, for sequencing. The newly generated sequences were submitted to the GenBank (Tables 2–7).

Table 1.

Locus, primers, and PCR amplification conditions used in this study.

Locus Primers PCR amplification conditions
SSU NS1/NS4 95 °C: 5 min, (95 °C: 15 s, 55 °C: 15 s, 72 °C: 15 s) × 40 cycles
ITS ITS5/ITS4
LSU LR0R/LR5  
tef1 EF1-983F/EF1-2218R 95 °C: 5 min, (95 °C: 45 s, 52 °C: 45 s, 72 °C: 70 s) × 35 cycles
rpb2 fRPB2-5F/fRPB2-7cR 95 °C: 5 min, (95 °C: 45 s, 55 °C: 120 s, 72 °C: 50 s) × 35 cycles

Table 2.

GenBank accession numbers of the taxa in this study of Kirschsteiniothelia.

Taxon Voucher GenBank accession numbers
ITS LSU SSU
Kirschsteiniothelia acutispora MFLU21-0127 OP120780 ON980758 ON980754
Kirschsteiniothelia aethiops MFLUCC 16-1104 MH182583 MH182589 MH182615
Kirschsteiniothelia aethiops MFLUCC 15-0424 KU500571 KU500578 KU500585
Kirschsteiniothelia aquatica MFLUCC 16-1685 MH182587 MH182594 MH182618
Kirschsteiniothelia arasbaranica IRAN 2508C KX621983 KX621984 KX621985
Kirschsteiniothelia atra DEN MG602687 N/A N/A
Kirschsteiniothelia bulbosapicalis GZCC 23-0732 PQ248937 PQ248933 PQ248929
Kirschsteiniothelia cangshanensis MFLUCC 16-1350 MH182584 MH182592 N/A
Kirschsteiniothelia chiangmaiensis MFLUCC 23-0209 OR575473 OR575474 OR575475
Kirschsteiniothelia crustacea MFLU21-0129 MW851849 MW851854 N/A
Kirschsteiniothelia dendryphioides KUNCC 10431 OP626354 PQ248935 PQ248931
Kirschsteiniothelia distoseptata HKAS 131382 OR714747 N/A OR743200
Kirschsteiniothelia dujuanhuensis HKAS 129177 OQ874971 OQ732682 OQ875039
Kirschsteiniothelia dushanensis GZCC19-0415 OP377845 MW133830 MW134610
Kirschsteiniothelia ebriosa CBSH-23379 N/A LT985885 N/A
Kirschsteiniothelia emarceis FLU10-0037 NR_138375 NG059454 N/A
Kirschsteiniothelia extensum MFLU21-0130 MW851850 MW851855 N/A
Kirschsteiniothelia fluminicola MFLUCC 16-1263 MH182582 MH182588 N/A
Kirschsteiniothelia guangdongensis ZHKUCC 22-0233 OR164946 OR164974 N/A
Kirschsteiniothelia guizhouensis GZCC 24-0034 PQ404852 PQ404856 PQ404859
Kirschsteiniothelia inthanonensis MFLUCC 23-0277 OR762773 OR762781 OR764784
Kirschsteiniothelia laojunensis KUN.L 88727 PP081651 PP081658 N/A
Kirschsteiniothelia lignicola MFLUCC 10-0036 HQ441567 HQ441568 HQ441569
Kirschsteiniothelia linzhiensis HKAS 144539* PV484695 PQ675402 PQ675362
Kirschsteiniothelia linzhiensis HKAS 144540* PV484696 PQ675403 PQ675363
Kirschsteiniothelia longiconidiophora KUNCC:23-13756 OR589303 OR600952 OR743201
Kirschsteiniothelia longirostrata GZCC 23-0733 PQ248939 PQ248934 PQ248930
Kirschsteiniothelia longispora HKAS 136268 PQ038266 PQ038273 PQ046108
Kirschsteiniothelia nabanheensis HJAUP C2004 OQ023197 OQ023273 OQ023038
Kirschsteiniothelia phoenicis MFLUCC 18-0216 MG859978 MG860484 MG859979
Kirschsteiniothelia pini UESTCC24.0131 PP835321 PP835315 PP835318
Kirschsteiniothelia puerensis ZHKUCC:22-0271 N/A NG_242017 OP451020
Kirschsteiniothelia ramus GZCC:23-0596 OR098711 OR091333 N/A
Kirschsteiniothelia rostrata MFLUCC 15-0619 KY697280 KY697276 KY697278
Kirschsteiniothelia saprophytica MFLUCC_23-0275 OR762774 OR762783 N/A
Kirschsteiniothelia septemseptata FLU21-0126 OP120779 ON980757 ON980752
Kirschsteiniothelia sichuanensis HKAS 134908 PP785368 PP784322 N/A
Kirschsteiniothelia sp. CX79B2 OQ645272 OQ645286 OQ645279
Kirschsteiniothelia sp. SICAUCC 23-0043 PP060659 PP057952 PP003820
Kirschsteiniothelia sp. SICAUCC 23-0044 PP060660 PP057953 PP003821
Kirschsteiniothelia sp. HJAUP C1209 PP505546 PP506568 PP527763
Kirschsteiniothelia sp. HJAUP C1501 PP505547 PP506569 N/A
Kirschsteiniothelia sp. HJAUP C1273 PP505548 PP506566 PP506565
Kirschsteiniothelia sp. HJAUP C1313 PP505549 PP506562 PP506563
Kirschsteiniothelia sp. KUNCC:23-13755 N/A N/A OR743199
Kirschsteiniothelia spatiosum MFLU21-0128 OP077294 N/A ON980753
Kirschsteiniothelia submersa MFLUCC 15-0427 KU500570 KU500577 KU500584
Kirschsteiniothelia tectonae MFLUCC 12-0050 KU144916 KU764707 N/A
Kirschsteiniothelia thailandica MFLUCC 20-0116 MT985633 MT984443 MT984280
Kirschsteiniothelia thujina JF13210 KM982716 KM982718 KM982717
Kirschsteiniothelia vinigena CBSH-23378 N/A NG075229 N/A
Kirschsteiniothelia weiningensis GZCC 24-0072 PQ404851 PQ404855 PQ404858
Kirschsteiniothelia xishuangbannaensis ZHKUCC 22-0220 OP289566 OP303181 OP289564
Kirschsteiniothelia xishuiensis GZCC 24-0052 PQ404850 PQ404854 PQ404857
Kirschsteiniothelia yadongensis HKAS 144543* PQ684985 PV483694 PV483715
Kirschsteiniothelia yadongensis HKAS 144544* PQ684986 PV483695 PV483716
Kirschsteiniothelia zizyphifolii MFLUCC 23-0270 OR762768 OR762776 OR764779
Homortomyces combreti CPC 19808 JX517281 JX517291 N/A
Homortomyces tamaricis MFLUCC 13–0441 NR_155161 NG_059495 N/A

The newly generated sequences are shown in gray shade, and the type strains are marked with an asterisk (*). Other type strains are in bold. ‘N/A’ indicates that the data are not available in GenBank.

Table 3.

GenBank accession numbers of the taxa in this study of Astrosphaeriellaceae.

Taxon Voucher GenBank accession numbers
LSU SSU tef1
Acrocordiopsis patilii MFLU 18-0533 MN017850 MN017916 N/A
Acrocordiopsis patilii BCC 28166 GU479772 GU479736 N/A
Acuminatispora palmarum MFLU:18-1068 MH390437 MH390401 MH399248
Acuminatispora palmarum MFLU:18-1069 MH390438 MH390402 MH399249
Aquatospora cylindrica MFLUCC 18-1287 MN913715 MT864327 MT954375
Astrosphaeriella bambusae MFLU:12-2471 KT955461 N/A KT955424
Astrosphaeriella fusispora MFLUCC 10-0555 KT955462 KT955443 KT955425
Astrosphaeriella neofusispora MFLU:11-0197 KT955463 KT955444 KT955426
Astrosphaeriella stellata MFLU 18-2030 JN846723 JN846733 N/A
Astrosphaeriella thailandica MFLU:11-0227 KT955465 KT955445 KT955427
Astrosphaeriella thysanolaenae MFLU:11-0222 KT955466 KT955446 KT955428
Astrosphaeriellopsis bakeriana CBS 115556 GU301801 N/A GU349015
Astrosphaeriellopsis caryotae MFLU:17-1255 NG_058605 NG_063660 MF588974
Caryospora aquatica MFLU:11-1083 NG_059058 MH057850 N/A
Caryospora quercus MFLU:18-2151 NG_066440 MK347869 N/A
Caryospora submersa MFLU:18-1539 NG_073802 N/A N/A
Mycopepon smithii GMB0202 MH049445 MH049453 N/A
Mycopepon smithii LGS20 MH049442 MH049450 N/A
Mycopepon smithii SMH 1609 AF279400 AF279399 N/A
Pithomyces caryotae MFLUCC 13-0828 MF588999 NG_063662 MF588978
Pithomyces flavus MTCC 12224 KP814133 KP814134 N/A
Pithomyces licualae MFLUCC 17-2031 NG_059846 NG_063661 N/A
Pithomyces esuvius MTCC 12224 KP814136 KP814137 N/A
Pteridiospora arengae MFLUCC 15-0289 NG_228976 ON650678 ON734017
Pteridiospora bambusae MFLU:18-0071 MG831565 MG831566 MG833012
Pteridiospora chiangraiensis MFLUCC 11-0162 KT955480 KT955459 KT955442
Pteridiospora javanica MFLUCC 11-0159 KJ742940 KJ739607 KJ739605
Quercicola fusiformis MFUCC 18-0479 MK348009 MK347898 MK360085
Quercicola guttulospora MFLU:18-2192 MK348010 MK347899 MK360086
Triseptatospora calami MFLUCC 15-0305 N/A ON650705 ON734018
Triseptatospora yadongensis HKAS 134939* PQ675404 PQ675364 PQ671461
Triseptatospora yadongensis HKAS 134940* PQ675405 PQ675365 PQ671462
Xenoastrosphaeriella aquatica CGMCC 3.20683 MZ420753 MZ420754 MZ442701
Xenoastrosphaeriella aquatica DLUCC 0869 MZ420752 MZ420755 MZ442700
Xenoastrosphaeriella tornata MFLUCC 11-0196 KT955467 KT955447 KT955429
Xenoastrosphaeriella tornata KUMCC 18-0194 MT659668 MT659669 MT653597
Murispora bromicola MFLUCC 15-0031 NG_059595 KT305996 KT305999
Murispora kazachstanica CBS 148424 NG_088293 NG_081421 OK019410

The newly generated sequences are shown in gray shade, and the type strains are marked with an asterisk (*). Other type strains are in bold. ‘N/A’ indicates that the data are not available in GenBank.

Table 4.

GenBank accession numbers of the taxa in this study of Dictyosporiaceae.

Taxon Voucher GenBank accession numbers
ITS LSU SSU tef1
Aquadictyospora clematidis MFLU 172080 MT310592 MT214545 MT226664 MT394727
Aquadictyospora lignicola MFLUCC 17-1318 MF948621 MF948629 N/A N/A
Dendryphiella paravinosa CPC26176 KX228257 KX228309 N/A N/A
Dendryphiella vinosa MFLU200444 MT907477 MT907480 N/A N/A
Dictyocheirospora aquatica KUMCC 15-0305 KY320508 KY320513 AB787223 AB808489
Dictyocheirospora bannica KH332 LC014543 AB807513 MH381759 N/A
Dictyocheirospora pseudomusae yone 234 LC014550 AB807520 AB797230 AB808496
Dictyosporium alatum ATCC 34953 NR_077171 DQ018101 DQ018080 N/A
Dictyosporium elegans NBRC 32502 DQ018087 DQ018100 DQ018079 N/A
Dictyosporium meiosporum MFLUCC 10-0131 KP710944 KP710945 KP710946 N/A
Dictyosporium nigroapice MFLUCC 17-2053 MH381768 MH381777 MH381762 MH388821
Dictyosporium olivaceosporum KH375 LC014542 AB807514 AB797224 AB808490
Dictyosporium pandanicola MFLUCC 18-0331 MZ490792 MZ490776 N/A MZ501208
Dictyosporium tetrasporum KT2865 LC014551 AB807519 AB797229 AB808495
Dictyosporium tratense MFLUCC 17-2052 MH381767 MH381776 MH381761 MF388820
Gregarithecium curvisporum KT922 AB809644 AB807547 AB797257 AB808523
Jalapriya pulchra MFLU17-1683 MF948628 MF948636 N/A MF953171
Jalapriya toruloides CBS209.65 DQ018093 DQ018104 DQ018081 N/A
Neodendryphiella brassaiopsidis MHZU:23-0113 OR365455 OR365485 OR365491 N/A
Neodendryphiella michoacanensis CBS:144323 NR_160583 NG_066395 N/A N/A
Neodendryphiella tarraconensis CBS:144324 NR_160582 NG_066394 N/A N/A
Paradictyocheirospora tectonae NFCCI:4878 NR_189839 NG_241935 N/A MW854832
Pseudocoleophoma calamagrostidis KT3284 LC014592 LC014609 LC014604 LC014614
Pseudocoleophoma flavescens CBS178.93 N/A GU238075 GU238216 N/A
Pseudocoleophoma polygonicola KT731 AB809634 AB807546 AB797256 AB808522
Pseudodictyosporium elegans CBS 688.93 MH862454 MH874101 DQ018084 N/A
Pseudodictyosporium thailandica MFLUCC 16-0029 KX259520 KX259522 KX259524 KX259526
Trichobotrys effusa JAUCC 6359 PP406377 PP407503 PP407508 PP405621
Trichobotrys effusus SNC73 PP592489 PP621120 PP639248 PP761036
Trichobotrys meilingensis JAUCC 4985 PP406380 PP407504 PP407509 PP405623
Trichobotrys motuoensis HKAS 144531* PQ684987 PQ675406 PQ675366 PQ671463
Trichobotrys motuoensis HKAS 144532* PQ684988 PQ675407 PQ675367 PQ671464
Trichobotrys sinensis KUNCC 23-14554 OR233595 OR335805 OR501421 OR547995
Trichobotrys yunjushanensis JAUCC 4987 PP406378 PP407506 PP407511 PP405622
Verrucoccum coppinsii E. 00814291 NR_177147 NG_153929 NG_081399 N/A
Verrucoccum spribillei MSC 31786 NR_177539 NG_088165 NG_087876 N/A
Vikalpa grandispora KUNCC 22-12425 OP526638 OP526648 OP526628 OP542240
Vikalpa sphaerica CGMCC 3.20682 OP526639 OP526649 OP526629 OP542241
Periconia igniaria CBS 379.86 LC014585 AB807566 AB797276 AB808542
Periconia igniaria CBS 845.96 LC014586 AB807567 AB797277 AB808543

The newly generated sequences are shown in gray shade, and the type strains are marked with an asterisk (*). Other type strains are in bold. ‘N/A’ indicates that the data are not available in GenBank.

Table 5.

GenBank accession numbers of the taxa in this study of Periconia.

Taxon Voucher GenBank accession numbers
SSU ITS LSU tef1
Periconia algeriana CBS 321.79 N/A MH861212 MH872979 N/A
Periconia alishanica KUMCC 19-0174 N/A MW063167 MW063231 MW183792
Periconia alishanica NCYUCC 19-0186 N/A MW063166 MW063230 MW183791
Periconia ananasi MFLUCC:21-0155 OL606142 OL753685 OL606153 OL912946
Periconia aquatica MFLUCC16-0912 N/A KY794701 KY794705 KY814760
Periconia arecacearum MFLU 19-0803 PP639222 PP592462 PP621090 PP828795
Periconia artemisiae KUMCC 20-0265 MW448658 MW448657 MW448571 MW460898
Periconia atropurpurea CBS 381.55 N/A MH857524 MH869061 N/A
Periconia banksiae CBS 129526 N/A JF951147 NG_064279 N/A
Periconia byssoides MFLUCC17-2292 MK347858 MK347751 MK347968 MK360069
Periconia byssoides MFLUCC18-1553 MK347914 MK347806 MK348025 MK360068
Periconia caespitosa LAMIC 110/16 N/A MH051906 MH051907 N/A
Periconia calamagrostidicola CBS H-25342 N/A NR_197928 PP791460 PP780620
Periconia celtidis MFLU 19-2784 N/A NR_174830 NG_079543 N/A
Periconia chengduensis UESTCC 22.0140 OP956046 OP955977 OP956002 OP961443
Periconia chiangraiensis MFLU 21-0280 OL606143 OL753686 OL606154 OL912947
Periconia chimonanthi KUMCC 20-0266 MW448656 NR_176752 MW448572 MW460897
Periconia circinata CBS 263.37 N/A MW810265 MH867413 MW735660
Periconia citlaltepetlensis ENCB 140251 N/A MH890645 MT625978 N/A
Periconia citlaltepetlensis IOM 325319.2 N/A MT649221 MT649216 N/A
Periconia cookei UESTCC 22.0134 OP956037 OP955968 OP955993 N/A
Periconia cortaderiae MFLUCC 15-0457 KX986345 KX965732 KX954401 KY310703
Periconia cynodontis CGMCC 3.23927 OP909920 OP909925 OP909921 OP961434
Periconia cyperacearum CPC 32138 N/A MH327815 MH327851 N/A
Periconia delonicis MFLUCC 17-2584 MK347832 N/A MK347941 MK360071
Periconia didymosporum MFLU 15-0058 KP761738 KP761734 KP761731 KP761728
Periconia digitata CBS 510.77 AB797271 LC014584 AB807561 AB808537
Periconia elaeidis MFLUCC 17-0087 MH108551 MG742713 MH108552 N/A
Periconia endophytica ZHKUCC 23-0995 PP277722 OR995582 OR995588 PP025968
Periconia epilithographicola MFLUCC21-0153 OL606144 OL753687 OL606155 OL912948
Periconia festucae CGMCC 3.23929 OP956042 OP955973 OP955998 OP961439
Periconia floridana CBS 150884   NR_197917 NG_244042  
Periconia genistae CBS 322.79 N/A MH861213 MH872980 N/A
Periconia homothallica CBS 139698 AB797275 AB809645 NG_059397 AB808541
Periconia igniaria CBS 298.66 N/A MH858798 MH870438 N/A
Periconia igniaria CBS 583.66 N/A MH858888 MH870553 N/A
Periconia imperatae UESTCC 22.0145 OP956048 OP955979 OP956004 OP961445
Periconia kunmingensis HKAS:102239 OR225814 MH892346 MH892400 MH908963
Periconia lateralis CBS 292.36 N/A MH855804 MH867311 N/A
Periconia linzhiensis HKAS 144526* PQ675368 PQ684989 PQ675408 PQ671465
Periconia linzhiensis HKAS 144525* PQ675369 PQ684990 PQ675409 PQ671466
Periconia macrospinosa CPC 22898 KP184080 KP183999 KP184038 N/A
Periconia minutissima MFLUCC 15-0245 N/A KY794703 KY794707 N/A
Periconia muchuanensis HKAS 135150 PQ066546 PQ067783 PQ067698 PQ278553
Periconia neobrittanica CBS 146062 N/A MN562149 MN567656 N/A
Periconia neominutissima CBS 149514 N/A NR_189522 NG_242103 N/A
Periconia palmicola MFLUCC 14-0400 MN648319 N/A MN648327 MN821070
Periconia penniseti CGMCC 3.23928 OP956040 OP955971 OP955996 OP961437
Periconia philadelphiana CPC 42854 N/A OQ628486 OQ629068 N/A
Periconia prolifica CBS 209.64 N/A NR_160097 MH870050 N/A
Periconia pseudobyssoides UESTCC 22.0135 OP956034 OP955965 OP955990 OP961431
Periconia pseudobyssoides UESTCC 22.0147 OP956044 OP955975 OP956000 OP961441
Periconia pseudodigitata CBS 139699 AB797274 LC014591 AB807564 AB808540
Periconia sahariana CBS 320.79 N/A MH861211 MH872978 N/A
Periconia salina MFLU 19-1235 MN017912 MN047086 MN017846 N/A
Periconia shannanensis HKAS 134945 PP968558 PP968552 PP968555 PP226770
Periconia sichuanensis CGMCC 3.25598 PQ066545 PQ067867 PQ067697 PQ278551
Periconia spodiopogonis CGMCC 3.23932 OP956032 OP955963 OP955988 OP961429
Periconia spodiopogonis HKAS 135635* PQ675370 PP952765 N/A N/A
Periconia submersa MFLUCC 16-1098 N/A KY794702 KY794706 KY814761
Periconia thailandica MFLUCC 17-0065 KY753889 KY753887 KY753888 N/A
Periconia thysanolaenae KUMCC 20-0262 NG_081407 MW442967 MW444850 MW460896
Periconia variicolor CBS 120374 N/A DQ336713 N/A N/A
Periconia verrucosa UESTCC 22.0136 OP956035 OP955966 OP955991 OP961432
Periconia wurfbainiae ZHKUCC 23-0999 PP277726 OR995586 OR995592 PP025972
Periconia yangjiangensis ZHKUCC 23-0997 PP277724 OR995584 OR995590 PP025970
Massarina cisti CBS 266.62 FJ795490 LC014568 AB807539 AB808514
Massarina pandanicola MFLU:18-0004 NG_065725 MG646958 NG_064488 MG646986

The newly generated sequences are shown in gray shade, and the type strains are marked with an asterisk (*). Other type strains are in bold. ‘N/A’ indicates that the data are not available in GenBank.

Table 6.

GenBank accession numbers of the taxa in this study of Tetraplosphaeriaceae.

Taxon Voucher GenBank accession numbers
SSU ITS LSU
Aquatisphaeria thailandica MFLUCC 21-0025 MW890967 MW890969 MW890763
Aquatisphaeria thailandica DLUCC B151 MW890968 N/A MW890764
Byssolophis sphaerioides IFRDCC 2053 GU296140 N/A GU301805
Ernakulamia cochinensis MFLUCC 18-1237 MT864326 MT627670 MN913716
Ernakulamia krabiensis MFLUCC 18-0237 MK347880 MK347773 MK347990
Ernakulamia tanakae NFCCI 4615 N/A MN937229 MN937211
Neotriplosphaeria yadongensis HKAS 144527* PQ675371 PQ684991 PQ675410
Neotriplosphaeria yadongensis HKAS 144528* PQ675372 PQ684992 PQ675411
Parapolyplosphaeria thailandica MFLU 15-3273 N/A KU248766 KU248767
Polyplosphaeria fusca KT1616 AB524463 AB524789 AB524604
Polyplosphaeria guizhouensis GZCC 23-0598   OR427327 OR438888
Polyplosphaeria hainanensis GZCC 23-0599 OR438285 OR427323 OR438889
Polyplosphaeria nabanheensis KUMCC 16-0151 MH260352 MH275078 MH260312
Polyplosphaeria pandanicola KUMCC 17-0180 MH260353 MH275079 MH260313
Pseudopolyplosphaeria guizhouensis GZCC 19-0247 OR134445 N/A N/A
Pseudotetraploa bambusicola CGMCC 3.20939 ON332923 ON332915 ON332933
Pseudotetraploa curviappendiculata HC:4930 AB524467 AB524792 AB524608
Pseudotetraploa longissima HC:4933 AB524471 AB524796 AB524612
Pseudotetraploa rajmachiensis NFCCI 4618 N/A MN937222 MN937204
Pseudotetraploa yunnanensis KUNCC 10464 N/A OR449073 OR438891
Quadricrura bicornis CBS 125427 AB524472 AB524797 AB524613
Quadricrura meridionalis CBS 125684 AB524473 AB524798 AB524614
Shrungabeeja aquatica MFLUCC 18-0664 N/A MT627722 MT627663
Shrungabeeja fluviatilis GZCC 20-0505 OP377989 OP377804 OP377903
Shrungabeeja longiappendiculata BCC 76463 KT376471 KT376474 KT376472
Shrungabeeja vadirajensis MFLUCC 17-2362 N/A MT627681 MN913685
Tetraploa aquatica MFLU 19-0995 N/A MT530448 MT530452
Tetraploa aristata CBS 996.70 AB524486 AB524805 AB524627
Tetraploa bambusae KUMCC 21-0844 ON077073 ON077078 ON077067
Tetraploa cylindrica KUMCC 20-0205 MT893203 MT893205 MT893204
Tetraploa cylindrica ZHKUCC 22-0087 ON555690 ON555689 ON555688
Tetraploa dashaoensis KUMCC 21-0010 OL473556 OL473549 OL473555
Tetraploa dwibahubeeja NFCCI 4621 N/A MN937226 MN937208
Tetraploa endophytica CBS 147114 N/A KT270279 MW659165
Tetraploa hainanensis GZCC 23-0601 OR438286 OR427325 OR438892
Tetraploa juncicola CBS 149046 N/A ON603780 ON603800
Tetraploa lignicola KUNCC 10794 ON422300 ON422286 ON422294
Tetraploa linzhiensis HKAS 144535* PQ675373 PQ684993 PQ675412
Tetraploa linzhiensis HKAS 144536* PQ675374 PQ684994 PQ675413
Tetraploa nagasakiensis KT 1682 AB524489 AB524806 AB524630
Tetraploa obpyriformis KUMCC 21-0011 OL473557 OL473558 OL473554
Tetraploa oryzae MFLU 23-0195 OR458352 OR438372 OR438841
Tetraploa palmae HKAS 115638 PP639245 N/A PP621116
Tetraploa phoenicis HKAS 115675 PP639246 PP592486 PP621117
Tetraploa pseudoaristata NFCCI 4624 N/A MN937232 MN937214
Tetraploa puzheheiensis KUMCC 20-0151 N/A MT627744 MT627655
Tetraploa sasicola KT 563 AB524490 AB524807 AB524631
Tetraploa scheueri CY112 N/A HQ607964 N/A
Tetraploa sp. HKAS 131566 N/A PP768923 PP768935
Tetraploa thailandica MFLUCC 21-0030 MZ413274 MZ412518 MZ412530
Tetraploa thrayabahubeeja NFCCI 4627 N/A MN937235 MN937217
Tetraploa wurfbainiae MHZU 23-0231 OR626043 OR626039 OR626041
Tetraploa yakushimensis KT 1906 AB524491 AB524808 AB524632
Tetraploa yunnanensis MFLUCC 19-0319 MT864341 MT627743 MN913735
Triplosphaeria acuta KT 1170 AB524492 AB524809 AB524633
Triplosphaeria cylindrica KT 1800 AB524494 AB524810 AB524635
Triplosphaeria maxima KT 870 AB524496 AB524812 AB524637
Murispora aquatica MFLU 19-0990 MN325077 MN325085 MN325075
Murispora cardui MFLU 15-2248 NG_063589 NR_171721 KT709176

The newly generated sequences are shown in gray shade, and the type strains are marked with an asterisk (*). Other type strains are in bold. ‘N/A’ indicates that the data are not available in GenBank.

Table 7.

GenBank accession numbers of the taxa in this study of Torula.

Taxon Voucher GenBank accession numbers
ITS LSU SSU rpb2 tef1
Torula acaciae CPC 29737 KY173471 KY173560 N/A KY173594 N/A
Torula aquatica MFLUCC 16-1115 MG208167 MG208146 N/A MG207977 N/A
Torula aquatica DLUCC 0550 MG208166 MG208145 N/A MG207976 MG207996
Torula breviconidiophora KUMCC 18-0130 MK071670 MK071672 MK071697 N/A MK077673
Torula calceiformis HKAS 125551 OP751055 OP751053 OP751051 OQ630510 OQ630512
Torula calceiformis HKAS 125552 OP751054 OP751052 OP751050 OQ630511 OQ630513
Torula camporesii KUMCC 19-0112 MN507400 MN507402 MN507401 MN507404 MN507403
Torula chiangmaiensis KUMCC 16-0039 MN061342 KY197856 KY197863 N/A KY197876
Torula chinensis UESTCC 22-0085 OQ127986 OQ128004 OQ127995 N/A N/A
Torula chromolaenae KUMCC 16-0036 MN061345 KY197860 KY197867 KY197873 KY197880
Torula chromolaenae MFLUCC 20-0237 MW412524 MW412518 MW412515 MW422161 MW422158
Torula dingjieensis HKAS 144529* PQ684995 PQ675414 PQ675375 PQ671471 PQ671467
Torula dingjieensis HKAS 144530* PQ684996 PQ675415 PQ675376 PQ671472 PQ671468
Torula fici CBS 595.96 KF443408 KF443385 KF443387 KF443395 KF443402
Torula fici KUMCC 16-0038 MN061341 KY197859 KY197866 KY197872 KY197879
Torula gaodangensis MFLUCC 17-0234 MF034135 NG_059827 MF034134 N/A N/A
Torula goaensis MTCC 12620 NR_159045 NG_060016 N/A N/A N/A
Torula herbarum CPC 24414 KR873260 KR873288 N/A N/A N/A
Torula hollandica CBS 220.69 NR_132893 NG_064274 KF443389 KF443393 KF443401
Torula hydei KUMCC 16-0037 MN061346 MH253926 MH253928 N/A N/A
Torula lancangjiangensis HKAS 112709 NR_175706 NG_081516 NG_078759 MW729780 MW729785
Torula lancangjiangensis B03 MZ538529 MZ538563 N/A N/A MZ567104
Torula longan ZHKUCC 22-0121 OR194035 OR194027 OR194032 OR228535 OR228537
Torula longan ZHKUCC 22-0122 OR194036 OR194028 OR194033 OR228536 OR228538
Torula luguhuensis KUNCC 22-12427 OQ729758 OQ947766 N/A OQ999002 OQ999004
Torula mackenziei MFLUCC 13-0839 MN061344 KY197861 KY197868 KY197874 KY197881
Torula mackenziei HKAS 112705 MW723058 MW879525 MW774581 N/A N/A
Torula masonii CBS 245.57 NR_145193 NG_058185 N/A N/A N/A
Torula masonii MFLUCC 20-0239 MW412523 MW412517 MW412514 MW422160 MW422157
Torula phytolaccae ZHKUCC 22-0107 ON611796 ON611800 ON611798 ON660879 ON660881
Torula phytolaccae ZHKUCC 22-0108 ON611795 ON611799 ON611797 ON660878 ON660880
Torula pluriseptata MFLUCC 14-0437 MN061338 KY197855 KY197862 KY197869 KY197875
Torula polyseptata MFLUCC 17-1495 MT214382 MT214476 MT214427 MT235830 MT235791
Torula sichuanensis UESTCC 22-0087 OQ127981 OQ127999 OQ127990 N/A N/A
Torula snbmersa UESTCC 22-0086 OQ127985 OQ128003 OQ127994 N/A N/A
Torula suae CGMCC 3.24259 OP359406 OP359415 OP369300 OP476730 OP471618
Torula sundara UESTCC 22-0125 OQ127984 OQ128002 OQ127993 N/A N/A
Torula sundara UESTCC 22-0088 OQ127983 OQ128001 OQ127992 N/A N/A
Torula sundara MFLU 21-0089 OM276824 OM287866 N/A N/A N/A
Torula thailandica MFLU:19-2856 MN907426 MN907427 MN907428 N/A N/A
Torula yadongensis HKAS 144533* PQ684997 PQ675416 PQ675377 PQ671473 PQ671469
Torula yadongensis HKAS 144534* PQ684998 PQ675417 PQ675378 PQ671474 PQ671470
Cylindrotorula indica NFCCI:4836 MT339444 MT339442 N/A MT321490 MT321492
Cylindrotorula indica NFCCI:4837 MT339445 MT339443 N/A MT321491 MT321493

The newly generated sequences are shown in gray shade, and the type strains are marked with an asterisk (*). Other type strains are in bold. ‘N/A’ indicates that the data are not available in GenBank.

2.3. Phylogenetic analyses

The raw sequences were assembled using SeqMan (Katoh et al. 2005). Comparison with GenBank data was conducted to identify their close relatives. The assembled sequences were compared with GenBank data to identify their closest related taxa. Each gene matrix was aligned separately using MAFFT v. 6.8 (Katoh et al. 2005). The aligned datasets were then manually edited with BioEdit v. 7.0.9 (Hall 1999). SequenceMatrix v. 1.7.8 (Vaidya et al. 2011) was used to combine these datasets. The combined alignment was subsequently used for maximum likelihood (ML) and Bayesian inference (BI) analyses.

The ML analysis was performed using RAxML-HPC2 on XSEDE v. 8.2.10 on the CIPRES Science Gateway v. 3.3 (Miller et al. 2010) with default parameters. The adjustments were made by setting the bootstrap iterations to 1,000, and the substitution model was defined as GTR+GAMMA+I. MrModeltest v. 2.3 was utilised to determine the optimal model for each gene. The BI analysis was conducted using MrBayes v. 3.2.6 (Ronquist et al. 2012). Six simultaneous Markov Chain Monte Carlo (MCMC) chains ran for 500,000 generations, and trees were sampled every 1,000th generation until the standard deviation of the split frequencies dropped below 0.01. The first 25% of generations were discarded as the burn-in phase (Huelsenbeck and Ronquist 2001). The remaining ones were used to calculate Posterior probabilities (PP). The resulting phylogenetic tree was visualised using FigTree v. 1.4.0 and further edited using Adobe Illustrator 2020 and Adobe Photoshop CC 2019.

3. Results

Kirschsteiniotheliales Hern-Restr., R.F. Castañeda, Gené & Crous

Kirschsteiniotheliaceae Boonmee & K.D. Hyde

For Kirschsteiniothelia, 56th taxa were used (Table 2) to assess the taxonomic placement of new isolates using combined three loci (SSU: 1–926 bp; LSU: 927–1,714 bp; ITS: 1,715–2,168 bp), with Homortomyces combreti and H. tamaricis (Wijayawardene et al. 2014) as the outgroup. The ML and BI methods were used to obtain the phylogenetic results (Figure 1). The total character number of combined sequences was 2,168 including gaps. The matrix had 909 distinct alignment patterns, with 22.74% of undetermined characters or gaps. Estimated base frequencies were as follows: A = 0.229197, C = 0.252822, G = 0.299630, T = 0.218352; substitution rates: AC = 1.435134, AG = 2.861902, AT = 0.965679, CG = 1.486506, CT = 6.142113, GT = 1.000000; gamma distribution shape parameter α = 0.532956. The best-scoring RAxML tree had a final likelihood value of −15,870.140997. The ML tree topology was similar to the one inferred from BI analysis. Our specimens Kirschsteiniothelia linzhiensis (HKAS 144539 & HKAS 144540) and K. yadongensis (HKAS 144543 & HKAS 144544) formed distinct monophyletic clades with K. aqutica and K. phoenicis with support value of (100% ML/1.00 PP), respectively.

Figure 1.

Figure 1.

Maximum likelihood tree of Kirschsteiniothelia from a four-locus dataset (ITS, SSU, and LSU). RAxML bootstrap support values (ML ≥ 70%) and Bayesian posterior probability (PP ≥ 0.90) are shown at the nodes (ML/PP). The scale bar indicates 0.05 changes per site. Homortomyces combreti (CPC 19808) and H. tamaricis (MFLUCC 13-0441) were selected as outgroup taxa. The type strains are in bold while the newly generated sequences are indicated in red.

Kirschsteiniothelia D. Hawksw., Bot. J. Linn. Soc. 91: 182 (1985)

Kirschsteiniothelia was introduced by Hawksworth (1985) and was initially classified under Pleosporaceae with Kirschsteiniothelia aethiops as the type species, which was later moved to Pleomassariaceae by Barr (1987) based on morphology. Molecular analyses by Kodsueb et al. (2006) further indicated that K. aethiops did not belong to Pleosporaceae. Later, Boonmee et al. (2012) proposed a new family, Kirschsteiniotheliaceae (Pleosporales), based on morphological and phylogenetic analyses (ITS, SSU, and LSU) to accommodate Kirschsteiniothelia (Boonmee et al. 2012). Subsequently, Kirschsteiniothelia was placed in the newly proposed order Kirschsteiniotheliales (Dothideomycetes) by Hernández-Restrepo et al. (2017). Morphologically, the sexual morph of Kirschsteiniothelia is characterised by brown, semi-immersed, subglobose ascomata, cylindrical-clavate, bitunicate, 8-spored asci, brown ascospores with smooth walls and usually have 1–2-septate (Hawksworth 1985; Yang et al. 2010; Xu et al. 2023a; Louangphan et al. 2024), and the asexual morph is characterised by macronematous, branched or unbranched, erect, septate, conidiophores, terminal, determinate, monophialidic, conidiogenous cells and cylindric-obclavate, septate, brown to dark brown conidia (Boonmee et al. 2012; Bao et al. 2018). The genus Kirschsteiniothelia currently comprises 43 species (Senanayake et al. 2023; Xu et al. 2023a; Louangphan et al. 2024; Tang et al. 2024). The members of Kirschsteiniothelia are commonly saprobic on decaying wood (Senanayake et al. 2023). Kirschsteiniothelia species are globally distributed and found in a wide range of habitats across both temperate and tropical regions (Suetrong et al. 2009; Boonmee et al. 2012; Jayawardena et al. 2022). In this study, we introduce two new species from the Xizang Autonomous Region, China, based on phylogenetic and morphological analyses.

Kirschsteiniothelia linzhiensis S.C. He, Q. Zhao & K.D. Hyde, sp. nov. Figure 2

Figure 2.

Figure 2.

Kirschsteiniothelia linzhiensis (HKAS 144539, holotype). (a) Host substrate. (b – c) Colonies on natural substrate. (d – f) Conidiophores. (g – j) Conidiogenous cells and conidia. (k – p) Conidia. (q) Germinated conidium. (r, s) Culture on PDA. Scale bars: d = 100 μm, e – f = 50 μm, g – j = 25 μm, k – q = 10 μm.

MycoBank number: MB857898; Facesoffungi number: FoF17072.

Etymology – Referring to the collecting site of the type specimen, Linzhi City, Xizang Autonomous Region, China.

Description – Saprobic on unidentified decaying wood. Asexual morph: Hyphomycetous. Colonies effuse, scattered, erect, and brown. Conidiophores 77–200 × 6–8 μm (xˉ = 140 × 7 μm, n = 20), macronematous, mononematous, erect, simple, straight or flexuous, unbranched, cylindrical, smooth, thick-walled, septate, pale brown to brown. Conidiogenous cells monoblastic, terminal, cylindrical, brown conidia developing at the apex. Conidia 31–43 × 6–10 μm (xˉ = 36 × 8 μm, n = 30), solitary, acrogenous dry, obovoid, guttulate, thick-walled, 3–4-septate, straight or curved, pale brown to brown, with a gelatinous sheath at the apex. Sexual morph: Not observed.

Culture characteristics – germinating within 24 h on PDA at 25 °C, slow growing, reaching 1.1–1.3 cm after 10 days incubation, above colony grey, reverse black, entire, convex, surface smooth, dense, no pigment.

Host – On unknown substrate.

Known distribution – China, Xizang Autonomous Region, Linzhi City, Chayu County.

Material examined – China, Xizang Autonomous Region, Linzhi City, Chayu County (28°54′N, 96°98′E, 1,878 m), on unknown wood, 13 August 2023, Shucheng He, WZY20 (KUN-HKAS 144539, holotype) – ex-type, KUNCC24-18549.

Notes – Kirschsteiniothelia linzhiensis formed a monophyletic clade K. aquatica with 100% ML and 1.00 PP support. Morphologically, K. linzhiensis resembles K. aquatica in having macronematous, simple, straight or flexuous, unbranched, thick-walled, smooth, septate conidiophores, and solitary, septate conidia (Bao et al. 2018). However, K. linzhiensis differs from K. aquatica in having obovoid, guttulate, and pale brown to brown conidia with a gelatinous sheath (Bao et al. 2018). The nucleotide differences for ITS, LSU, and SSU between K. linzhiensis and K. aquatica are 36/762 (4.7%, without gaps), 6/750 (0.8%, without gaps), and 5/740 (0.7%, without gaps), respectively. Based on morphological and phylogenetic analyses, we propose a new species K. linzhiensis from Linzhi City, Xizang Autonomous Region, China.

Kirschsteiniothelia yadongensis S.C. He, Q. Zhao & K.D. Hyde, sp. nov. Figure 3

Figure 3.

Figure 3.

Kirschsteiniothelia yadongensis (HKAS 144543, holotype). (a) Host substrate. (b) Colonies on natural substrate. (c – f) Conidiophores and conidiogenous cells. (g – j) Conidia. (k, l) Culture on PDA. Scale bars: c – f = 100 μm, g – j = 50 μm.

MycoBank number: MB857899; Facesoffungi number: FoF17073.

Etymology – Referring to the collecting site of the type specimen, Yadong County, Shigatse City, Xizang Autonomous Region, China.

Description – Saprobic on decaying wood. Asexual morph: Hyphomycetous. Colonies immersed on the substrate, effuse, composed of septate, unbranched, brown to black. Conidiophores 92–146 × 4–8.5 μm (xˉ = 120 × 7 μm, n = 20), macronematous, mononematous, erect, simple, straight or flexuous, unbranched, smooth, thick-walled, septate, pale brown to brown. Conidiogenous cells monoblastic, terminal, cylindrical, brown, terminal developing into conidia. Conidia 61–97 × 16–21 μm (xˉ = 77 × 19 μm, n = 20), solitary, acrogenous, simple, obclavate, smooth, guttulate, thick-walled, 6–8-septate, brown to black brown, lighter apex with a hayline gelatinous sheath. Sexual morph: Not observed.

Culture characteristics – germinating within 24 h on PDA at 25 °C, reaching 2.5–3.0 cm after 20 days incubation, above and reverse both black with white margin, filamentous, raised, surface smooth, medium dense, no pigment.

Host – On unknown substrate.

Known distribution – China, Xizang Autonomous Region, Shigatse City, Yadong County.

Material examined – China, Xizang Autonomous Region, Shigatse City, Yadong County (27°63′N, 88°92′E, 3,707 m), on unknown wood of a deciduous tree, 29 July 2023, Shucheng He, ZYW119 (KUN-HKAS 144543, holotype) – ex-type, KUNCC24-18543.

Notes – Phylogenetically, K. yadongensis formed a monophyletic clade with K. phoenicis (92% ML/1.00 PP, Figure 1). Kirschsteiniothelia phoenicis, which is saprobic on Phoenix paludosa (Arecaceae) and was reported from Thailand, was described by Hyde et al. (2018) based on its sexual morphic characteristics and phylogenetic results (ITS, SSU, and LSU). Because Kirschsteiniothelia phoenicis only reports the sexual morph (Hyde et al. 2018), and our isolates only report the asexual morph, there is no morphological comparison. It is distinguishable K. yadongensis from K. phoenicis based on morphology (Hyde et al. 2018). However, K. yadongensis differs from K. phoenicis by 49/510 (9.6%, without gaps) ITS, 11/810 (1.3%, without gaps) LSU, and 13/805 (1.6%, without gaps) SSU differences in the nucleotides comparisons. Thus, we propose a new species K. yadongensis from Shigatse City, Xizang Autonomous Region, China.

Astrosphaeriellaceae Phook. & K.D. Hyde

The SSU+LSU+tef1 dataset includes sequences from 38 samples representing 31 species in the GenBank database (Table 3). Murispora kazachstanica and Murispora bromicola are selected as outgroups following Crous et al. (2021). After comparison, the LSU, SSU, and tef1 were assembled (SSU = 1–908 bp; LSU = 909–1,689 bp; tef1 = 1,690–2,561 bp), and the phylogenetic trees of ML and BI were constructed. The phylogenetic analysis results showed that the total number of combined sequence sites was 2,561 including gaps. The matrix had 654 distinct alignment patterns, with 17.40% of undetermined characters or gaps. Estimated base frequencies were as follows: A = 0.244259, C = 0.245957, G = 0.280553, T = 0.229231; substitution rates: AC = 1.245609, AG = 3.886107, AT = 1.345370, CG = 1.060643, CT = 13.468140, GT = 1.000000; gamma distribution shape parameter α = 0.426349. The best-scoring RAxML tree had a final likelihood value of −11,241.554985. Triseptatospora yadongensis (HKAS 134939 and HKAS 134939) formed a distinct clade with T. calami with support value of (86% ML/0.96 PP, Figure 4).

Figure 4.

Figure 4.

Maximum likelihood tree of Astrosphaeriellaceae from a three-locus dataset (SSU, LSU, and tef1). RAxML bootstrap support values (ML ≥ 70%) and Bayesian posterior probability (PP ≥ 0.90) are shown at the nodes (ML/PP). The scale bar indicates 0.03 changes per site. Murispora kazachstanica (CBS 148424) and M. bromicola (MFLUCC 15-0031) were selected as outgroup. The type strains are in bold while the newly generated sequences are indicated in red.

Triseptatospora Konta & K.D. Hyde. Mycosphere 14(1): 117 (2023)

Triseptatospora (Astrosphaeriellaceae, Pleosporales), a monotypic genus, was introduced by Konta et al. (2023) to accommodate the type species Triseptatospora calami. Triseptatospora was collected from Calamus sp. in the terrestrial habitat of Thailand. Morphologically, only the sexual morph has been reported. The genus is characterised by scattered to gregarious, superficial, raised, subglobose to dome-shaped, clustered, black, ostiolate ascomata, 6–8-spored, bitunicate, short pedicels asci, fusiform, 3-septate, hyaline, guttulate, mucilaginous sheath ascospores (Konta et al. 2023).

Triseptatospora yadongensis S.C. He, Jayaward. & Q. Zhao, sp. nov. Figure 5

Figure 5.

Figure 5.

Triseptatospora yadongensis (HKAS 134939, holotype). (a) Host substrate. (b, c) Synnemata on the host surface. (d, e) Synnemata composed of conidiophores. (f, g) Conidiogenous cells. (h – k) Conidia. (l) Culture on PDA. Scale bars: d, e = 100 μm, f – k = 50 μm.

MycoBank number: MB 857900; Facesoffungi number: FoF17074.

Etymology – Referring to the collecting site of the type specimen, Yadong County, China.

Description – Saprobic on unknown wood. Asexual morph: Hyphomycetous. Synnemata 270–430 × 20–27 μm (xˉ = 360 × 24 μm, n = 10), on host surface, synnematous, synnemata composed of conidiophores, erect, solitary, straight, terminal branched, closely compacted hyphae, with brown to dark brown stems, terminal developing into conidiogenous cells and conidia. Conidiophores 280–340 × 2.8–3.5 μm (xˉ = 325 × 3 μm, n = 10), straight, unbranched, smooth, thick-walled, rough-walled, septate, brown, terminal developing into conidiogenous cells. Conidiogenous cells 14–28 × 10–17 μm (xˉ = 19 × 13 μm, n = 10), monoblastic, integrated, terminal, determinate, connected at the base of conidia, brown. Conidia 55–71 × 32–50 μm (xˉ = 63 × 40 μm, n = 20), dictyospores, solitary, acrogenous, simple, papillate, rugose, thick-walled, rough-walled, 4–6 transverse septa, 7–9 longitudinal septa, yellow-brown, constricted at the septa. Sexual morph: Not observed.

Culture characteristics – Conidia germinating within 20 h on PDA at 25 °C, reaching 2.5–3 cm after 20 days incubation, colony surface pale olivaceous-grey, reverse grey green, dense, circular, slightly raised, smooth, entire, hairy, wrinkled folded, pigmentation not produced on PDA.

Host – On unknown substrate.

Known distribution – China, Xizang Autonomous Region, Shigatse City, Yadong County.

Material examined – China, Xizang Autonomous Region, Shigatse City, Yadong County (27°23’N, 89°01′E, 1,687 m), 25 July 2023, Shucheng He, CT20 (KUN-HKAS 134939, holotype) – ex-type: KUNCC 24-17789. ibid. Shucheng He, CT24 (KUN-HKAS 134940, paratype) – ex-paratype: KUNCC24-17790.

Notes – The isolates formed a monophyletic clade with T. calami (Figure 4). Morphologically, our collections have distinct synnemata, which were first reported in Astrosphaeriellaceae (Liu et al. 2018; Wanasinghe et al. 2018; Dong et al. 2020; Crous et al. 2021; Luo et al. 2022; Konta et al. 2023). The isolates are similar to Kostermansinda in morphology, have synnematous and dictyospores, acrogenous, papillate conidia, however, the conidia of Kostermansinda have multiple (12–13 vs. 7–9) longitudinal septa (Boedijn 1960; Rifai 1968). The phylogenetic position of Kostermansinda has not been resolved as they lack DNA-based sequence data. Comparison of LSU, mtSSU, rpb2, and tef1 sequences in the NCBI database revealed that they belong to the orders Lecanorales, Monoblastiales, and Tubeufiales, respectively (Hosoya and Yano 2020). Species in Triseptatospora are known only by sexual morphs (Konta et al. 2023), the nucleotide differences of SSU and tef1 between our isolates and Triseptatospora calami are 3/793 (0.4%, without gaps) and 47/956 (5%, without gaps), respectively (Konta et al. 2023). Based on this evidence, following Chethana et al. (2021), we have retained our isolate in Triseptatospora and propose a new species, T. yadongensis, from Shigatse City, Xizang Autonomous Region, China.

Dictyosporiaceae Boonmee & K.D. Hyde

The combined ITS, LSU, SSU, and tef1 datasets comprise 40 taxa, with Periconia igniaria (Su et al. 2023) as the outgroup taxa (Table 4). The dataset consisted of 3,967 total characters, including gaps (LSU: 1–826 bp, SSU: 827–1,751 bp, ITS: 1,752–2,271 bp, tef1: 2,272–3,099 bp). The matrix had 818 distinct alignment patterns, with 21.01% of undetermined characters or gaps. Estimated base frequencies were as follows: A = 0.243068, C = 0.241628, G = 0.269153, T = 0.246152; substitution rates: AC = 1.684401, AG = 3.847836, AT = 2.349320, CG = 0.793813, CT = 9.946496, GT = 1.000000; gamma distribution shape parameter α = 0.457026. The best-scoring RAxML tree with a final likelihood value of −15,213.255591 is presented in Figure 6. The tree topology obtained from ML analysis is similar to the one inferred from BI analysis. Based on the phylogenetic analyses of the combined ITS, LSU, and SSU sequence data, the novel species Trichobotrys motuoensis (HKAS 144531 and HKAS 144532) is closely related to T. sinensis with 100% ML/0.97 PP statistical support (Figure 6).

Figure 6.

Figure 6.

Maximum likelihood tree of Dictyosporiaceae reconstructed from a four-locus dataset (LSU, SSU, ITS, and tef1). RAxML bootstrap support values (ML ≥ 70%) and Bayesian posterior probability (PP ≥ 0.90) are shown at the nodes (ML/PP). The scale bar indicates 0.03 changes per site. Periconia igniaria (CBS 379.86 and CBS 845.96) was selected as outgroup. The type strains are in bold while the newly generated sequences are indicated in red.

Trichobotrys Penz. & Sacc., Malpighia 15(7–9): 245 (1902) [1901]

Trichobotrys was introduced by Penzig and Saccardo (1902) to accommodate the type species Tr. pannosus. Later, Tr. pannosus was treated as a synonym of Tr. effusa (Morgan-Jones et al. 1987; D’Souza and Bhat 2001). Trichobotrys has eight epithets in Index Fungorum (2025, accessed on 7 May 2025) and among them, only four species (Tr. effusa, Tr. meilingensis, Tr. sinensis, and Tr. yunjushanensis) have been molecularly confirmed (Phookamsak et al. 2024; Zhang et al. 2024). The genus is known solely by its asexual morph, which is characterised by solitary or clustered in a small group, scattered to gregarious, globose to subglobose, ostiolate, minute papilla conidiomata, dark brown to black, effuse colonies, macronematous, mononematous, brown, verruculose or echinulate conidiophores, smooth, fertile, often unciform lateral branches, with sterile, setiform apex, polyblastic, integrated, terminal or discrete, ellipsoidal, spherical or subspherical conidiogenous cells and catenated, spherical, brown, aseptate, verruculose or echinulate conidia (D’Souza and Bhat 2001; Phookamsak et al. 2024; Zhang et al. 2024). Species of Trichobotrys were reported in China and Java, from both aquatic and terrestrial habitats, where they are saprobic on Arecaceae and Poaceae (Brachiaria mutica and Bamboo) (D’Souza and Bhat 2001; Phookamsak et al. 2024; Zhang et al. 2024).

Trichobotrys motuoensis S.C. He, Q. Zhao & K.D. Hyde, sp. nov. Figure 7

Figure 7.

Figure 7.

Trichobotrys motuoensis (HKAS 144531, holotype). (a, b) Culture on PDA. (c, d) Appearance of colonies on SNA. (e, f) Conidiophores. (g – j) Conidiogenous cells. (k) Conidia. Scale bars: e, f = 50 μm, g – k = 25 μm.

MycoBank number: MB857901; Facesoffungi number: FoF17075.

Etymology – Referring to the collecting site of the type specimen, Motuo County, China.

Description – Asexual morph: Hyphomycetous. Colonies on the Synthetic Low Nutrient Agar (SNA), effuse, branched, dark brown, hairy. Conidiophores 800–1,100 μm long, 3–5 μm wide (xˉ = 4 μm, n = 20), dichotomously branched, mononematous, simple, flexuous, branched or occasionally loosely branched, verruculose, thick-walled, rough-walled, echinulate, septate, pale brown to brown. Conidiogenous cells 14–20 × 4–4.6 μm (xˉ = 17 × 4 μm, n = 20), polyblastic, integrated, terminal, hyaline to pale brown, verruculose, thick-walled, denticulate. Conidia 5–6 × 5–6 μm (xˉ = 5.5 × 5.5 μm, n = 30), catenate, acropleurogenous, solitary, simple, dry, verruculose, echinulate, globose, thin-walled, smooth-walled, aseptate, brown. Sexual morph: Not observed.

Culture characteristics – on PDA at 25 °C, reaching 6.0–6.2 cm after 45 days incubation, above colony pale yellow, reverse yellow edge with a black centre, irregular, raised, umbonate, surface rough, dense, no pigment.

Host – On unknown substrate.

Known distribution – China, Xizang Autonomous Region, Linzhi City, Motuo County.

Material examined – China, Xizang Autonomous Region, Linzhi City, Motuo County (29°25′N, 95°20′E, 792 m), on unidentified substrate, 6 July 2022, Shucheng He, HSC944 (KUN-HKAS 144531, holotype) – ex-type – KUNCC24-18551.

Notes – The phylogenetic tree (LSU, SSU, ITS, and tef1) showed that Tr. motuoensis was clustered with Tr. sinensis and Tr. meilingensis (Figure 6). Morphologically, Tr. motuoensis resembles Tr. sinensis and Tr. meilingensis in having acropleurogenous, verruculose, echinulate, globose conidia. However, Tr. motuoensis has larger conidia compared to Tr. sinensis (5.5–5.5 µm vs. 2.8–2 µm), and smaller conidia compared to Tr. meilingensis (5.5–5.5 µm vs. 7–13 µm) (Phookamsak et al. 2024; Zhang et al. 2024). Trichobotrys sinensis and Tr. meilingensis have both been found in aquatic environments in China. Trichobotrys sinensis is saprobic on Brachiaria mutica (Poaceae), while Tr. meilingensis is saprobic on decaying bamboo (Phookamsak et al. 2024; Zhang et al. 2024). The nucleotide differences for ITS, LSU, SSU, and tef1 between Tr. motuoensis and Tr. sinensis are 6/480 (1.2%, without gaps), 2/770 (0.3%, without gaps), 2/763 (0.3%, without gaps), and 15/870 (1.7%, without gaps), respectively. Similarly, the nucleotide differences for ITS, LSU, SSU, and tef1 between Tr. motuoensis and Tr. meilingensis are 6/501 (1.2%, without gaps), 2/800 (0.2%, without gaps), 3/752 (0.4%, without gaps), and 11/774 (1.4%, without gaps), respectively. Therefore, we introduce Tr. motuoensis as a new species, from Motuo County, Xizang Autonomous Region, China.

Periconiaceae Nann.

The combined LSU, SSU, ITS, and tef1 dataset comprises 68 taxa, with Massarina cisti (Tanaka et al. 2015) and Massarina pandanicola (Tibpromma et al. 2018) designated as the outgroup taxon (Table 5). The dataset consists of 3,118 total characters including gaps (LSU: 1–823 bp, SSU: 824–1,770 bp, tef1: 1,771–2,618 bp, ITS: 2,619–3,118 bp). The matrix had 802 distinct alignment patterns, with 25.80% of undetermined characters or gaps. Estimated base frequencies were as follows: A = 0.236633, C = 0.256358, G = 0.270666, T = 0.236343; substitution rates: AC = 1.797398, AG = 2.963500, AT = 2.015171, CG = 1.254214, CT = 10.715473, GT = 1.000000; gamma distribution shape parameter α = 0.515216. The best-scoring RAxML tree had a final likelihood value of −15,110.354168. Both the ML and BI analyses yielded similar tree topologies, and only the tree inferred from ML analysis is shown (Figure 8). Our isolates (HKAS 144526 and HKAS 144527) formed a well-supported, distinct clade with Periconia didymosporum (100% ML/1.00 PP, Figure 8). In addition, we identify P. spodiopogonis as a new host record for China.

Figure 8.

Figure 8.

Maximum likelihood tree of Periconia reconstructed from a four-locus dataset (ITS, SSU, LSU, and tef1). RAxML bootstrap support values (ML ≥ 70%) and Bayesian posterior probability (PP ≥ 0.90) are shown at the nodes (ML/PP). The scale bar indicates 0.02 changes per site. Massarina cisti (CBS 266.62) and M. pandanicola (MFLU 18-0004) were selected as outgroup taxa. The type strains are in bold while the newly generated sequences are indicated in red.

Periconia Tode, Fung. mecklenb. sel. (Lüneburg) 2: 2 (1791)

Periconia (Periconiaceae, Pleosporales) was introduced by Tode (1791) with P. lichenoides as the type species. This genus primarily comprises species known for their asexual morphs, characterised by macronematous, mononematous conidiophores, and globose to ellipsoidal conidia (Phookamsak et al. 2019; Hongsanan et al. 2020; Liao et al. 2024). The sexual morph is characterised by immersed to erumpent, scattered or aggregated, subglobose to globose ascomata, hyaline, 8-spored, bitunicate, cylindrical, septate, guttulate, ascospores with an entire sheath (Tanaka et al. 2015; Yang et al. 2022; Su et al. 2023; Sun et al. 2025). Periconia species are mostly saprophytes and endophytes, though some are plant pathogens such as P. circinata and P. macrospinosa (Kolomiets et al. 2008; Sarkar et al. 2019) and are widely distributed in terrestrial habitats. The genus includes 234 records (Index Fungorum 2025, accessed on 7 May 2025). These fungi have a cosmopolitan distribution and inhabit various environments, including soil, decaying plant material, and living plant tissues. Notable species include P. byssoides, P. digitate, and P. minutissima, found on diverse hosts such as grasses, legumes, and daisies (Hyde et al. 2020; Crous et al. 2023).

Periconia linzhiensis S.C. He, Q. Zhao & K.D. Hyde, sp. nov. Figure 9

Figure 9.

Figure 9.

Periconia linzhiensis (HKAS 144526, holotype). (a) Host substrate. (b – c) Colonies on natural substrate. (d – f) Conidiophores. (g – i) Conidiogenous cells. (j – o) Conidia. (p, q) Culture on PDA. Scale bars: d – f = 100 μm, g – i = 50 μm, j – o = 10 μm.

MycoBank number: MB857902; Facesoffungi number: FoF17076.

Etymology – Referring to the collecting site of the type specimen, Linzhi City, Xizang Autonomous Region, China.

Description – Saprobic on dead bamboo. Asexual morph: Hyphomycetous. Colonies on the substrate, effuse, erect, brown to dark brown, hairy. Conidiophores 315–427 × 16–21 μm (xˉ = 355 × 18 μm, n = 20), macronematous, mononematous, erect, simple, straight or flexuous, unbranched, thick and smooth-walled, septate, brown to dark brown. Conidiogenous cells polyblastic, terminal, subglobose, smooth to verruculose, hyaline to brown. Conidia 14–24 × 16–25 μm (xˉ = 21 × 20 μm, n = 30), catenate, acrogenous, globose, simple, simple, verruculose, thick-walled, rough-walled, aseptate, pale brown when young; dark brown when mature. Sexual morph: Not observed.

Culture characteristics – Germinating within 24 h on PDA at 25 °C, reaching 5.5–6.0 cm after 30 days incubation, above colony brown black with grey centre; reverse brown, circular undulate, umbonate, surface rough, mycelia dense, no pigment.

Host – Bamboo.

Known distribution – China, Xizang Autonomous Region, Linzhi City, Motuo County.

Material examined – China, Xizang Autonomous Region, Linzhi City, Motuo County (29°35′N, 95°14′E, 1,730 m), on bamboo, 7 August 2023, Shucheng He, SBB30 (KUN-HKAS 144526, holotype) – ex-type, KUNCC25-19123.

Notes – Periconia linzhiensis formed a monophyletic clade with P. didymosporum with 100% ML/1.00 PP statistical support (Figure 8). Periconia linzhiensis and P. didymosporum were recorded from terrestrial environments and are saprophytic on Bamboo (Yang et al. 2022). However, P. didymosporum (= Bambusistroma didymosporum) was reported based on the sexual morph (Yang et al. 2022). The asexual morph of Periconia linzhiensis was reported. Periconia linzhiensis differed from P. didymosporum by 16/510 (3.2%, without gaps) ITS, 5/750 (0.6%, without gaps) LSU, 1/750 (0.1%, without gaps) SSU, and 7/810 (0.8%, without gaps) tef1 differences in the nucleotides. Thus, we propose P. linzhiensis as a new species.

Periconia spodiopogonis Y.P. Chen & Z.H. Lu, Journal of Fungi 9: 18 (2023) Figure 10

Figure 10.

Figure 10.

Periconia spodiopogonis (KHAS135635, new host record). (a) Host (Bamboo). (b, c) On the host surface. (d, e) Conidiophores. (f, g) Conidiogenous cells. (h – m) Conidia. Scale bars: d, e = 100 µm, f, g = 50 μm, h – m = 10 μm.

MycoBank number: MB847469; Facesoffungi number: FoF17077.

Description – Saprobic on dead bamboo. Asexual morph: Hyphomycetous. Colonies on the substrate, effuse, brown to dark brown, hairy. Conidiophores 430–720 × 16–27 μm (xˉ = 590 × 22 μm, n = 20), macronematous, mononematous, erect, simple, straight or flexuous, branched at the apex, thick-walled, smooth-walled, septate, dark brown. Conidiogenous cells polyblastic, integrated, terminal, subglobose, smooth to verruculose, brown. Conidia 17–22 × 11–15 μm (xˉ = 20 × 12.6 μm, n = 30), acrogenous, ellipsoidal to cylindrical, simple, verruculose, guttulate, thick-walled, rough-walled, aseptate, pale brown to dark brown. Sexual morph: Not observed.

Material examined – China, Xizang Autonomous Region, Linzhi City, Motuo County (29°17′N, 95°15′E, 1,550 m) on bamboo, 9 August 2023, Shucheng He, SBB04 (HKAS 135635).

Known distribution – China (Su et al. 2023).

Known hosts – Spodiopogon (Su et al. 2023), Bamboo (this study).

Notes – In the combined phylogenetic analyses (LSU, ITS, and SSU), our isolate was grouped together with P. spodiopogonis, having 100% ML/1.00 PP statistical support. Periconia spodiopogonis was initially described as a saprobe on Spodiopogon in China (Su et al. 2023). There were no differences in the ITS and SSU base sequences between our isolate and ex-type strain of P. spodiopogonis. Morphologically, our isolate (Figure 10) shares similar characteristics with P. spodiopogonis in conidiophores (590 × 22 vs. 595 × 15 μm) that are appressed to the substrate, macronematous, mononematous, erect, straight or flexuous and the conidia (20 × 12.6 vs. 20 × 12.5 μm) are acrogenous, ellipsoidal to cylindrical, verruculose, guttulate and aseptate (Su et al. 2023). Thus, based on phylogenetic analysis and morphological characteristics, we identified our isolate as P. spodiopogonis, which is a new host record in China.

Tetraplosphaeriaceae Kaz. Tanaka & K. Hiray

In order to clarify the taxonomic status of four taxa, based on these four gene fragments, 58 fungal sequences of Tetraplosphaeriaceae were downloaded from the GenBank databases (Table 6), with Murispora aquatica and Murispora cardui as the outgroup (Bao et al. 2019). According to the LSU-SSU-ITS sequence data, the three genes were spliced (LSU = 1–821 bp; SSU = 822–1,747 bp; ITS = 1,748–2,289 bp). The total number of combined sequence sites is 2,289 including gaps. The matrix had 586 distinct alignment patterns, with 17.18% of undetermined characters or gaps. Estimated base frequencies were as follows: A = 0.247845, C = 0.241156, G = 0.282371, T = 0.228628; substitution rates: AC = 4.006945, AG = 4.409444, AT = 2.264925, CG = 1.075482, CT = 11.088939, GT = 1.000000; gamma distribution shape parameter α = 0.563830. The best-scoring RAxML tree had a final likelihood value of −11,459.593875. The ML tree topology was similar to the one inferred from BI analysis. The ML tree topology was similar to the one inferred from BI analysis. In the phylogenetic tree, each genus formed a separate clade, Neotriplosphaeria yadongensis forming a monophyletic clade in Tetraplosphaeriaceae, our isolates formed a monophyletic clade with Tetraploa nagasakiensis (Figure 11). Tetraplosphaeriaceae was established by Tanaka et al. (2009) to accommodate Polyplosphaeria, Pseudotetraploa, Quadricrura, Tetraplosphaeria (the type genus), and Triplosphaeria. It is characterised by massarina-like asexual morphs, immersed to superficial, glabrous, brown, cylindrical to clavate ascomata, and fusiform to cylindrical, narrowly, 8-spored asci, septate, hyaline to pale brown, with appendage-like sheath ascospores (Tanaka et al. 2009; Tian et al. 2024). The anamorphs of Tetraplosphaeriaceae are tetraploa-like hyphomycetes, micronematous, macronematous, erect, septate conidiophores, monoblastic, terminal conidiogenous cells, cylindrical to obpyriform, comprising 3–8 columns, verrucose, with 2–8-setose conidia (Tanaka et al. 2009). Based on morphological and molecular evidence (ITS, LSU, and SSU), Ariyawansa et al. (2015) introduced Shrungabeeja to Tetraplosphaeriaceae. Subsequently, Aquatisphaeria, Byssolophis, and Ernakulamia were introduced into the Tetraplosphaeriaceae (Delgado et al. 2017; Pem et al. 2019; Li et al. 2021). Recently, Zhang et al. (2023) introduced a new genus, Pseudopolyplospha, into Tetraplosphaeriaceae, which now consists of 10 genera (Zhang et al. 2023; Hyde et al. 2024b).

Figure 11.

Figure 11.

Maximum likelihood tree of Tetraplosphaeriaceae reconstructed from a three-locus dataset (LSU, SSU, and ITS). RAxML bootstrap support values (ML ≥ 70%) and Bayesian posterior probability (PP ≥ 0.90) are shown at the nodes (ML/PP). The scale bar indicates 0.03 changes per site. Murispora aquatica (MFLU 19-0990) and Murispora cardui (MFLU 15-2248) were selected as outgroup taxa. The type strains are in bold while the newly generated sequences are indicated in red.

Neotriplosphaeria S.C. He, Q. Zhao & K.D. Hyde, gen. nov.

MycoBank number: MB857903; Facesoffungi number: FoF17078.

Etymology – Named after its conidial similarity to Triplosphaeria.

Description – Saprobic on dead stems of bamboo. Asexual morph: Colonies effuse, medium dense, hairy, black. Conidiophores absent. Conidiogenous cells mononematous, monoblastic, integrated, terminal or intercalary, determinate, and cylindrical. Conidia solitary, septate, brown to dark brown, ovoid to obclavate, consisting of 2–4 columns of cells, multi-septate in each column, smooth, thick-walled, mostly with 2 to 4 apical appendages. Appendages cylindrical, solitary, unbranched, guttulate, septate, wide at the base, pale brown to brown, multi-septate, straight or flexuous, smooth-walled.

Neotriplosphaeria yadongensis S.C. He, Q. Zhao & K.D. Hyde, sp. nov. Figure 12

Figure 12.

Figure 12.

Neotriplosphaeria yadongensis (HKAS 144527, holotype). (a) Host substrate. (b, c) Appearance of colonies on natural substrate. (d – o) Conidia. (p, q) Appendages. Scale bars: d – o = 50 μm, p, q = 25 μm.

MycoBank number: MB857904; Facesoffungi number: FoF17079.

Etymology – Refers to the collecting site of the type specimen, Yadong County, China.

Description – Saprobic on dead stems of bamboo. Asexual morph: Colonies effuse, medium dense, hairy, black. Conidiophores absent. Conidiogenous cells mononematous, monoblastic, integrated, terminal or intercalary, determinate, cylindrical. Conidia 42–60 × 18–27 μm (xˉ = 49 × 22 μm, n = 30), solitary, septate, brown to dark brown, ovoid to obclavate, consisting of 2–4 columns of cells, 6–9-septate in each column, smooth, thick-walled, mostly with 2–4 apical appendages. Appendages 33–74 × 3–4 μm (xˉ = 55 × 3.5 μm, n = 30), cylindrical, solitary, unbranched, guttulate, 4–6-septate, wide at the base, pale brown to brown, straight or flexuous, smooth-walled. Sexual morph: Not observed.

Host – Bamboo.

Known distribution – China, Xizang Autonomous Region, Shigatse City, Yadong County.

Material examined – China, Xizang Autonomous Region, Shigatse City, Yadong County (27°13′N, 80°00′E, 1,824 m), on bamboo, 24 July 2023, Shucheng He, CT10 (KUN-HKAS 144527, holotype).

Notes – Neotriplosphaeria yadongensis formed a distinct clade within Tetraplosphaeriaceae. Its morphology fits well with the generic concept of Tetraplosphaeriaceae with cylindrical to obpyriform, comprising 3–8 columns, verrucose, with 2–8 appendages conidia (Tanaka et al. 2009). Morphologically, the conidia of Neotriplosphaeria consist of 2–4 columns of cells with 2–4 apical appendages, while the conidia of Triplosphaeria consist of only three columns of cells with three apical appendages (Tanaka et al. 2009). Neotriplosphaeria has ovoid to obclavate conidia with 2–4 appendages of similar length, while Quadricrura has globose to subglobose conidia with long appendages that are usually 1–2 appendages, and short that are 4–5 appendages (Tanaka et al. 2009). Based on phylogenetic and morphological analyses, we propose a new genus, Neotriplosphaeria, within Tetraplosphaeriaceae to accommodate the new species N. yadongensis from Yadong County, Xizang Autonomous Region, China.

Tetraploa Berk. & Broome, Ann. Mag. nat. Hist., Ser. 2 5: 459 (1850)

Tetraploa was introduced by Berkeley and Broome (1850) and was later assigned as the type genus of Tetraplosphaeriaceae (Tanaka et al. 2009). Tetraploa is the largest genus in Tetraplosphaeriaceae (Tang et al. 2023; Zhang et al. 2023), with 44 epithets currently listed in Index Fungorum (accessed on 25 August 2024). The sexual morph is characterised by immersed to erumpent, globose to subglobose, glabrous ascomata, fissitunicate, cylindrical to clavate, short-stalked asci with eight ascospores, and narrowly fusiform, hyaline, smooth ascospores with a narrow mucilaginous appendage-like sheath (Tanaka et al. 2009). The main characteristics of the asexual morph are cylindrical, brown, verrucose, aseptate conidia with four setose appendages at the apex (Tanaka et al. 2009; Tang et al. 2023; Zhang et al. 2023). Species of Tetraploa were commonly found as endophytes and saprobes on plant leaves and stems in both terrestrial and aquatic environments (Tanaka et al. 2009; Ariyawansa et al. 2015; Delgado et al. 2017; Pem et al. 2019; Hongsanan et al. 2020). They were documented on bamboo, other herbaceous plants, and in decaying wood and soil (Dong et al. 2020; Li et al. 2021). Notably, Te. aristata was reported as a pathogen affecting a variety of plants and humans (Markham et al. 1990; Hyde et al. 2013).

Tetraploa linzhiensis S.C. He, Q. Zhao & K.D. Hyde, sp. nov. Figure 13

Figure 13.

Figure 13.

Tetraploa linzhiensis (HKAS 144535, holotype). (a) Host substrate. (b) Appearance of colonies on natural substrate. (c – i) Conidia. (j – l) Appendages. (m) Culture on PDA. Scale bars: c – l = 50 μm.

MycoBank number: MB857905; Facesoffungi number: FoF17080.

Etymology – Referring to the collecting site of the type specimen, Linzhi city, China.

Description – Saprobic on dead stems of Elsholtzia sp. Asexual morph: Hyphomycetous Colonies effuse, sparse, black. Conidiophores absent. Conidiogenous cells monoblastic, integrated, determinate. Conidia 25–45 × 19–30 μm (xˉ = 39 × 23 μm, n = 30), solitary, cylindrical to obovate, septate, brown to dark brown, consisting of 1–3 columns of cells, 3–6-septate in each column, verruculose, thick-walled, rough-walled, with 1–3 apical appendages. Appendages 180–320 × 1–1.2 μm (xˉ = 260 × 1.1 μm, n = 30), cylindrical, solitary, unbranched, wide at the base, pale brown to brown, hyaline at the apex, 6–9-septate, straight, guttulate, smooth-walled, long appendages, short appendages 102–188 × 7–9 μm (xˉ = 137 × 8 μm, n = 30). Sexual morph: Not observed.

Culture characteristics – Germinating within 24 h on PDA at 25 °C, reaching 1.8–2 cm after 15 days incubation, above colony grey, reverse dark grey with black edge, entire, undulate, umbonate, surface smooth, mycelia dense, no pigment.

Host – Elsholtzia sp. (Lamiaceae).

Known distribution – China, Xizang Autonomous Region, Linzhi City, Chayu County.

Material examined – China, Xizang Autonomous Region, Linzhi City, Chayu County (28°54′N, 96°98′E, 1,878 m), on Elsholtzia sp., 13 August 2023, Shucheng He, ZYW49 (KUN-HKAS 144535, holotype) – ex-type culture in KUNCC24-18547.

Notes – The phylogenetic tree showed Te. linzhiensis was clustered with Te. cylindrica and Te. nagasakiensis with 100% ML and 1.00 PP support (Figure 11). Morphologically, Te. linzhiensis resembles Te. cylindrica and Te. nagasakiensis in having cylindrical to obovate, brown, multi columns of cells, verruculose, thick-walled, rough-walled conidia (Tanaka et al. 2009; Hyde et al. 2013). However, Te. linzhiensis mostly consists of three columns of cells and three appendages conidia, while Te. cylindrica and Te. nagasakiensis mostly consist of four columns of cells and four appendages conidia (Tanaka et al. 2009; Hyde et al. 2013). Tetraploa cylindrica and Te. nagasakiensis are both saprobic on Poaceae (Sasa kurilensis and bamboo) in Japan (Tanaka et al. 2009). The nucleotide differences for ITS, LSU, and SSU between Te. linzhiensis and Te. cylindrica are 10/505 (2%, without gaps), 3/748 (0.4%, without gaps), and 3/755 (0.4%, without gaps), respectively. Similarly, the nucleotide differences for ITS, LSU, and SSU between Te. linzhiensis and Te. nagasakiensis are 18/490 (3.6%), 2/732 (0.3%), and 3/782 (0.4%), respectively. Therefore, based on phylogenetic and morphological analyses, we propose a new species, Te. linzhiensis, from Linzhi City, Xizang Autonomous Region, China.

Torulaceae Corda

The combined ITS, LSU, SSU, tef1, and rpb2 dataset comprised 43 taxa, with Cylindrotorula indica (Boonmee et al. 2021) as the outgroup taxa (Table 7). The dataset consisted of 3,920 total characters, including gaps (LSU: 1–806 bp, SSU: 807–1,715 bp, ITS: 1,716–2,214 bp, tef1: 2,215–3,080 bp, rpb2: 3,081–3,920 bp). The matrix had 842 distinct alignment patterns, with 26.55% of undetermined characters or gaps. Estimated base frequencies were as follows: A = 0.247197, C = 0.259213, G = 0.270214, T = 0.223376; substitution rates: AC = 2.116465, AG = 4.272528, AT = 1.684889, CG = 1.309028, CT = 9.872550, GT = 1.000000; gamma distribution shape parameter α = 0.521756. The best-scoring RAxML tree with a final likelihood value of −14,127.258641 is presented in Figure 14. The tree topology obtained from ML analysis is similar to the one inferred from BI analysis. The best-scoring RAxML tree is presented in (Figure 14). Our specimens Torula dingjieensis (HKAS 144529 & HKAS 144530) and T. yadongensis (HKAS 144533 & HKAS 144534) formed distinct monophyletic clades with T. fici and T. calceiformis with support value of 87% ML/0.92 PP and 95% ML/0.97 PP, indicating they are closely related.

Figure 14.

Figure 14.

Maximum likelihood tree of Torula reconstructed from a five-locus dataset (LSU, SSU, ITS, tef1, and rpb2). RAxML bootstrap support values (ML ≥ 70%) and Bayesian posterior probability (PP ≥ 0.90) are shown at the nodes (ML/PP). The scale bar indicates 0.03 changes per site. Cylindrotorula indica (NFCCI 4836 and NFCCI 4837) was selected as outgroup. The type strains are in bold while the newly generated sequences are indicated in red.

Torula Pers., Ann. Bot. (Usteri) 15: 25 (1795)

Torula was introduced by Persoon (1795) with the type species of To. herbarum. Most species of Torula were found in terrestrial and freshwater habitats on submerged wood or dead branches of Asteraceae, Cyperaceae, and Ranunculaceae in Asia, Europe, North America, and other regions (Crous et al. 2015; Hyde et al. 2017; Hongsanan et al. 2020; Jayawardena et al. 2022). Torula is the biggest genus in Torulaceae with 542 epithets recorded in Index Fungorum (24 November 2024). However, only 30 species were molecularly confirmed (Hyde et al. 2023; Tian et al. 2023; Wang et al. 2023a). Torula was documented solely in its asexual morph (Jayawardena et al. 2022; He et al. 2024b).

Torula dingjieensis S.C. He, Q. Zhao & K.D. Hyde, sp. nov. Figure 15

Figure 15.

Figure 15.

Torula dingjieensis (HKAS 144529, holotype). (a) Host substrate. (b, c) Appearance of colonies on natural substrate. (d, e) Conidiophores with conidiogenous cells. (f – k) Conidiogenous cells and conidia. (l – u) Conidia. (v, w) Culture on PDA. Scale bars: d = 50 μm, e – k, t, u = 20 μm, l – s = 10 μm.

MycoBank number: MB857906; Facesoffungi number: FoF17081.

Etymology – Referring to the collecting site of the type specimen, Dingjie County, China.

Description – Saprobic on dead stems of Ageratina adenophora. Asexual morph: Colonies effuse, medium dense, black. Conidiophores semi-macronematous, mononematous, straight or flexuous, unbranched or occasionally loosely branched, verruculose, thick-walled, rough-walled, doliiform to subcylindrical, septate consisting of 1–4 cells or reduced to conidiogenous cells, pale brown to brown. Conidiogenous cells polyblastic, terminal, pale brown to brown, verruculose, thick-walled, doliiform to cupulate. Conidia 11–29 × 6–22 μm (xˉ = 20 × 9 μm, n = 30), phragmospores, solitary, simple, dry, acrogenous, monilioid, verruculose, thick-walled, rough-walled, 0–4-septate, brown to dark brown. Sexual morph: Not observed.

Culture characteristics – germinating within 24 h on PDA at 25 °C, reaching 5.8–6.2 cm after 25 days incubation, above colony brown, reverse dark brown, both above and reverse with pale yellow edge, entire, undulate, umbonate, surface rough, mycelia dense, no pigment.

Host – Ageratina adenophora (Asteraceae).

Known distribution – China, Xizang Autonomous Region, Shigatse City, Dingjie County.

Material examined – China, Xizang Autonomous Region, Shigatse City, Dingjie County (27°54′N, 87°22′E, 2,240 m), on Ageratina adenophora, 4 July 2022, Shucheng He, HSC820 (KUN-HKAS 144529, holotype) – ex-type, KUNCC23-17478.

Notes – The phylogenetic tree showed that our isolates (HKAS 144529 and HKAS 144530) To. dingjieensis clustered with To. calceiformis (Figure 14). Torula calceiformis is saprobic on unidentified wood form Guizhou, China (Hyde et al. 2023). Our isolates (HKAS 144529 and HKAS 144530) were collected from Ageratina adenophora in Shigatse, Xizang Autonomous Region, China. Morphologically, To. dingjieensis resembles To. calceiformis in having semi-macronematous, mononematous, verruculose conidiophores, phragmospores, and monilioid, verruculose, multi-septate conidia. Compared to To. dingjieensis, To. calceiformis has conidia with additional septa (0–8-septate vs. 0–4-septate) and longer conidia (L/W ratio: 3 vs. 2.2) (Hyde et al. 2023). The nucleotide differences for ITS, LSU, SSU, tef1, and rpb2 between To. dingjieensis and To. calceiformis are 7/480 (1.5%, without gaps), 3/750 (0.4%, without gaps), 2/807 (0.2%, without gaps), 5/710 (0.7%, without gaps), and 21/885 (2.4%, without gaps), respectively (Hyde et al. 2023). Therefore, based on phylogenetic and morphological analyses, we propose a new species, To. dingjieensis, from Shigatse City, Xizang Autonomous Region, China.

Torula yadongensis S.C. He, Q. Zhao & K.D. Hyde, sp. nov. Figure 16

Figure 16.

Figure 16.

Torula yadongensis (HKAS 144533, holotype). (a) Host substrate. (b, c) Appearance of colonies on natural substrate. (d – g) Conidiophores. (h – k) Conidiogenous cells and conidia. (l – q) Branched chains of conidia. (r – w) Conidia. (x, y) Culture on PDA. Scale bars: d – g, n, q = 20 μm, h – m, o, p = 10 μm, r – w = 5 μm.

MycoBank number: MB857907; Facesoffungi number: FoF17082.

Etymology – Referring to the collecting site of the type specimen, Yadong County, China.

Description – Saprobic on dead stems of Artemisia sp. Asexual morph: Colonies effuse on nature substrate, medium dense, scattered, velutinous, black. Conidiophores macronematous, mononematous, straight or flexuous, branched of conidia chain, verruculose, thick-walled, rough-walled, doliiform to subcylindrical, septate, terminal reduced to conidiogenous cells, conidia chain hyaline or golden to dark brown. Conidiogenous cells monoblastic, terminal, pale brown to dark brown, verruculose, thick-walled, rough-walled, doliiform to cupulate. Conidia 8.4–14.6 × 4.3–6.2 μm (xˉ = 12 × 6 μm, n = 30), didymospores, solitary, simple, pleuroacrogenous, monilioid, verruculose, thick-walled, rough-walled, 0–2-septate, golden to dark brown. Sexual morph: Not observed.

Culture characteristics – Germinating within 24 h on PDA at 25 °C, reaching 3.8–4.0 cm after 20 days incubation, both above and reverse white, entire, flat, surface smooth, mycelia dense, no pigment.

Host – Artemisia sp. (Asteraceae).

Known distribution – China, Xizang Autonomous Region, Shigatse City, Yadong County.

Material examined – China, Xizang Autonomous Region, Shigatse City, Yadong County (27°29′N, 88°54′E, 2,960 m), on Artemisia sp., 3 July 2022, Shucheng He, HSC720 (KUN-HKAS 144533, holotype) – ex-type KUNCC23-17229.

Notes – The new species was isolated from Artemisia sp. in Yadong County, China. Phylogenetic analyses (LSU-SSU-ITS-tef1-rpb2) showed To. yadongensis is closely related to To. fici, which was collected from leaves of Ficus religiosa (Moraceae) in Cuba. The phylogenetic tree showed To. yadongensis and To. fici were close relatives with 87% ML/0.92 PP support (Figure 14). Torula yadongensis resembles To. fici with intact or cupulate conidiogenous cells that produce chains of rough-walled conidia (He et al. 2024c). Torula yadongensis has shorter (L/W ratio: 2 vs. 3.6) conidia than To. fici. The nucleotide differences for ITS, LSU, SSU, tef1, and rpb2 between To. yadongensis and To. fici were 10/489 (2%, without gaps), 21/780 (2.7%, without gaps), 5/991 (0.5%, without gaps), 18/798 (2.2%, without gaps), and 10/808 (1.2%, without gaps), respectively (Crous et al. 2015). Therefore, based on phylogenetic and morphological analyses, we propose a new species, To. yadongensis, from Yadong County, Xizang Autonomous Region, China.

4. Discussion

The Xizang Autonomous Region, China, is known for its extreme environmental conditions such as low temperatures, high UV radiation, and low oxygen levels (Chen et al. 2020; Wang et al. 2021). This provides a distinct habitat fostering the evolution of novel fungal taxa (Phurbu et al. 2024). In this study, we collected 19 specimens from the Xizang Autonomous Region, China, and identified a new genus, nine new species, and one new host record. Based on morphological characteristics and phylogenetic analyses, these taxa have been placed in two orders of Dothideomycetes: Astrosphaeriellaceae, Periconiaceae, Tetraplosphaeriaceae, Torulaceae, and one incertae sedis genus in Pleosporales (Zhang et al. 2012; Hongsanan et al. 2020), and Kirschsteiniotheliaceae in Kirschsteiniotheliales (Hernández-Restrepo et al. 2017).

Triseptatospora (Astrosphaeriellaceae, Pleosporales) was introduced by Konta et al. (2023). Species of Astrosphaeriellaceae were mainly found as sexual morph (Kuo and Goh 2019; Konta et al. 2023). Triseptatospora yadongensis has distinct synnemata, which is the key feature distinguishing it from other species in the Astrosphaeriellaceae (Liu et al. 2018; Wanasinghe et al. 2018; Dong et al. 2020; Crous et al. 2021; Luo et al. 2022; Konta et al. 2023). However, in the phylogenetic analysis, based on the genetic distance was not sufficient to provide strong evidence for the delineation of a new genus (Figure 4). Therefore, we retained our isolates in Triseptatospora, and for the first time, introduced a species from the Xizang Autonomous Region, China, into the genus (Konta et al. 2023), and proposed a new species, T. yadongensis. Periconia is the largest genus in Periconiaceae (Hyde et al. 2024b). Earlier members of this genus were placed in Massarinaceae. Based on phylogenetic analysis, Tanaka et al. (2015) suggested that Periconiaceae is a family distinct from Massarinaceae and Cai et al. (2024) first reported Periconia species in the Xizang Autonomous Region, China, based on morphology and phylogenetic analyses. In this study, we also introduce a new species and a new host record from the region. Tetraplosphaeriaceae was established by Tanaka et al. (2009) and consists of 10 genera (Zhang et al. 2023; Hyde et al. 2024b). In this study, based on phylogenetic and morphological analyses, we introduce a new genus, Neotriplosphaeria, to accommodate N. yadongensis, and a new species, Te. linzhiensis. Torula, is the most speciose genus in the Torulaceae with 542 epithets (He et al. 2024c). However, most species are not supported by molecular data (He et al. 2024c). Torulaceae currently has six genera introduced, namely, Cylindrotorula, Dendryphion, Neopodoconis, Neotorula, Rutola, and Torula (Qiu et al. 2022; Wang et al. 2023b). There is controversy over the division of some genera. Qiu et al. (2022) synonymised Sporidesmioides and Rostriconidium with Neopodoconis, Wang et al. (2023b) accepted Neopodoconis as a synonym of Rostriconidium and pointed out that there is insufficient evidence to synonymize Sporidesmioides with Neopodoconis. He et al. (2024c) proposed Torula longiconidiophora (Tian et al. 2023) as a synonym of Torula sundara (Jayawardena et al. 2022) based on phylogenetic and morphological analysis while investigating the relationships among species in the genus Torula (He et al. 2024c). Species of Torula are mainly distributed in Asia, Europe, North America (Jayawardena et al. 2022; Dong et al. 2023; He et al. 2024c). Both To. dingjieensis and To. yadongensis collected from Xizang Autonomous Region, China, add to the growing evidence that this region has a rich and largely unexplored fungal diversity. Trichobotrys, an incertae sedis genus, was placed in Pleosporales (Hyde et al. 2024b). To date, Trichobotrys includes four species supported by molecular data and morphological evidence, namely Tr. effusus, Tr. meilingensis, Tr. sinensis, and Tr. yunjushanensis (D’Souza and Bhat 2001; Phookamsak et al. 2024; Zhang et al. 2024). We constructed a phylogenetic tree (Figure 6) of Trichobotrys based on five genes (LSU, SSU, ITS, and tef1), and the results showed that Trichobotrys formed a similar topology to Phookamsak et al. (2024) and Zhang et al. (2024), with Gregarithecium having strong statistical support (100% ML/1.00 PP) in Dictyosporiaceae. Therefore, we propose the placement of Trichobotrys in Dictyosporiaceae, which further supports the conclusion proposed by Zhang et al. (2024). Kirschsteiniotheliales is a small order within Dothideomycetes (Hyde et al. 2024b). Species of Kirschsteiniothelia in China are primarily reported in the provinces of Guizhou, Hainan, Sichuan, and Yunnan (Tang et al. 2024; Xiao et al. 2025). In this study, we first report two species of Kirschsteiniothelia from Xizang Autonomous Region, China, including two new species K. linzhiensis and K. yadongensis.

The Xizang Autonomous Region, with its extreme environmental conditions, is a significant but underexplored area for fungal biodiversity. This study focused on microfungi from the Plateau, particularly within the orders Pleosporales and Kirschsteiniotheliales, both of which belong to the class Dothideomycetes. Fungal diversity plays a crucial role in the Xizang Autonomous Region by enhancing biodiversity understanding and ecosystem health (Hyde et al. 2024a; Phurbu et al. 2024; He et al. 2025). Xizang Autonomous Region, China, continues to be a rich source of fungal biodiversity. Further exploration of this unique environment is likely to uncover even more undiscovered fungal diversity.

Funding Statement

This study was supported by the Second Tibetan Plateau Scientific Expedition and Research Program [2024QZKK02010303], the Second Qinghai-Tibet Plateau Scientific Expedition and Research (STEP) Program [2019QZKK0503], the Survey of Wildlife Resources in Key Areas of Tibet [ZL202303601], the Chinese Academy of Sciences Key Technical Talents [2021-5-E12671], the Chinese Research Fund [E1644111K1] titled “Flexible introduction of the high-level expert program, Kunming Institute, Institute of Botany, Chinese Academy of Sciences”, and the Researchers Supporting Project of King Saud University, Riyadh, Saudi Arabia [RSP2025R114].

Disclosure statement

No potential conflict of interest was reported by the author(s).

References

  1. Ariyawansa HA, Hyde KD, Jayasiri SC, Buyck B, Chethana KWT, Dai DQ, Dai YC, Daranagama DA, Jayawardena RS, Lücking R, et al. 2015. Fungal diversity notes 111–252—taxonomic and phylogenetic contributions to fungal taxa. Fungal Divers. 75(1):27–274. doi: 10.1007/s13225-015-0346-5. [DOI] [Google Scholar]
  2. Bao DF, Luo ZL, Liu JK, Bhat DJ, Sarunya N, Li WL, Su HY, Hyde KD.. 2018. Lignicolous freshwater fungi in China III: three new species and a new record of Kirschsteiniothelia from northwestern Yunnan Province. Mycosphere. 9(4):755–768. doi: 10.5943/mycosphere/9/4/4. [DOI] [Google Scholar]
  3. Bao DF, Wanasinghe DN, Luo ZL, Mortimer PE, Kumar V, Su HY, Hyde KD. 2019. Murispora aquatica sp. nov. and Murispora fagicola, a new record from freshwater habitat in China. Phytotaxa. 416(1):1–13. doi: 10.11646/phytotaxa.416.1.1. [DOI] [Google Scholar]
  4. Barr ME. 1987. Prodromus to class Loculoascomycetes 67. Amherst: University of Massachusetts. [Google Scholar]
  5. Berkeley MJ, Broome CE. 1850. XL.— notices of British fungi. Ann Mag Nat Hist. 5(30):455–466. doi: 10.1080/03745486009494947. [DOI] [Google Scholar]
  6. Bhunjun CS, Dong Y, Jayawardena RS, Jeewon R, Phukhamsakda C, Bundhun D, Hyde KD, Sheng J. 2020. A polyphasic approach to delineate species in Bipolaris. Fungal Divers. 102(1):225–256. doi: 10.1007/s13225-020-00446-6. [DOI] [Google Scholar]
  7. Boedijn KB. 1960. A new Sclerographium from Indonesia. Persoonia. 1:319–320. [Google Scholar]
  8. Boonmee S, Ko TWK, Chukeatirote E, Hyde KD, Chen H, Cai L, McKenzie EHC, Jones EBG, Kodsueb R, Hassan BA. 2012. Two new Kirschsteiniothelia species with Dendryphiopsis anamorphs cluster in Kirschsteiniotheliaceae fam. nov. Mycologia. 104(3):698–714. doi: 10.3852/11-089. [DOI] [PubMed] [Google Scholar]
  9. Boonmee S, Wanasinghe DN, Calabon MS, Huanraluek N, Chandrasiri SKU, Jones GEB, Rossi W, Leonardi M, Singh SK, Rana S, et al. 2021. Fungal diversity notes 1387–1511: taxonomic and phylogenetic contributions on genera and species of fungal taxa. Fungal Divers. 111(1):1–335. doi: 10.1007/s13225-021-00489-3. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Cai T, He SC, Yu FM, Li CJY, Wang ZY, Mao C, Zhang Y, Zhao Q. 2024. Periconia shannanensis sp. nov. (Periconiaceae, Pleosporales) from Xizang, China. Phytotaxa. 664(4):249–262. doi: 10.11646/phytotaxa.664.4.2. [DOI] [Google Scholar]
  11. Carbone I, Kohn LM. 1999. A method for designing primer sets for speciation studies in filamentous ascomycetes. Mycologia. 91(3):553–556. doi: 10.1080/00275514.1999.12061051. [DOI] [Google Scholar]
  12. Chen F, Zhang J, Liu J, Cao X, Hou J, Zhu L, Xu X, Liu X, Wang M, Wu D, et al. 2020. Climate change, vegetation history, and landscape responses on the Tibetan Plateau during the Holocene: a comprehensive review. Quaternary Sci Rev. 243:106444. doi: 10.1016/j.quascirev.2020.106444. [DOI] [Google Scholar]
  13. Chen Q, Hou LW, Duan WJ, Crous PW, Cai L. 2017. Didymellaceae revisited. Stud Mycol. 87(1):105–159. doi: 10.1016/j.simyco.2017.06.002. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Chethana KWT, Manawasinghe IS, Hurdeal VG, Bhunjun CS, Appadoo MA, Gentekaki E, Raspé O, Promputtha I, Hyde KD. 2021. What are fungal species and how to delineate them? Fungal Divers. 109(1):1–25. doi: 10.1007/s13225-021-00483-9. [DOI] [Google Scholar]
  15. Crous PW, Carris LM, Giraldo A, Groenewald JZ, Hawksworth DL, Hernández-Restrepo M, Jaklitsch WM, Lebrun MH, Schumacher RK, Benjamin Stielow J, et al. 2015. The genera of fungi-fixing the application of the type species of generic names - G 2: Allantophomopsis, Latorua, Macrodiplodiopsis, Macrohilum, Milospium, Protostegia, Pyricularia, Robillarda, Rotula, Septoriella, Torula, and Wojnowicia. IMA Fungus. 6(1):163–198. doi: 10.5598/imafungus.2015.06.01.11. [DOI] [PMC free article] [PubMed] [Google Scholar]
  16. Crous PW, Osieck ER, Jurjević Ž, Boers J, Van Iperen AL, Dima B, Balashov S, Bulgakov TS, Johnston PR, Morozova OV, et al. 2021. Fungal planet description sheets: 1284–1382. Persoonia. 47(1):178–374. doi: 10.3767/persoonia.2021.47.06. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Crous PW, Osieck ER, Shivas RG, Tan YP, Bishop-Hurley SL, Esteve-Raventós F, Larsson E, Luangsa-Ard JJ, Pancorbo F, Balashov S, et al. 2023. Fungal planet description sheets: 1478–1549. Persoonia. 50(1):158–310. doi: 10.3767/persoonia.2023.50.05. [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. Delgado G, Koukol O, Cáceres O, Piepenbring M. 2017. The phylogenetic placement of Ernakulamia cochinensis within pleosporales (Dothideomycetes, Ascomycota). Cryptogam Mycol. 38(4):435–451. doi: 10.7872/crym/v38.iss4.2017.435. [DOI] [Google Scholar]
  19. Dong W, Hyde KD, Jeewon R, Liao CF, Zhao HJ, Kularathnage ND, Li H, Yang YH, Pem D, Shu YX, et al. 2023. Mycosphere notes 449–468: saprobic and endophytic fungi in China, Thailand, and Uzbekistan. Mycosphere. 14(1):2208–2262. doi: 10.5943/mycosphere/14/1/26. [DOI] [Google Scholar]
  20. Dong W, Wang B, Hyde KD, McKenzie EHC, Raja HA, Tanaka K, Abdel-Wahab MA, Abdel-Aziz FA, Doilom M, Phookamsak R, et al. 2020. Freshwater Dothideomycetes. Fungal Divers. 105(1):319–575. doi: 10.1007/s13225-020-00463-5. [DOI] [Google Scholar]
  21. D’Souza MA, Bhat DJ. 2001. A new species of Trichobotrys from the western ghat forests, India. Mycotaxon. 80:105–108. [Google Scholar]
  22. El-Demerdash A. 2018. Chemical diversity and biological activities of Phaeosphaeria fungi genus: a systematic review. J Fungi. 4(4):130. doi: 10.3390/jof4040130. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Hall TA. 1999. BioEdit auser-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser. 41:95–98. doi: 10.1021/bk-1999-0734.ch008. [DOI] [Google Scholar]
  24. Hawksworth DL. 1985. Kirschsteiniothelia, a new genus for the Microthelia incrustans-group (Dothideales). Bot J Linn Soc. 91(1–2):181–202. doi: 10.1111/j.1095-8339.1985tb01144.x. [DOI] [Google Scholar]
  25. He SC, Thiyagaraja V, Bhunjun CS, Chomnunti P, Dissanayake LS, Jayawardena RS, Yang HD, Zhao YW, Al-Otibi F, Zhao Q, et al. 2025. Morphology and multi-gene phylogeny reveal three new species of Clonostachys and two combinations of Sesquicillium (Bionectriaceae, Hypocreales) from Xizang, China. MycoKeys. 115:43–66. doi: 10.3897/mycokeys.115.139757. [DOI] [PMC free article] [PubMed] [Google Scholar]
  26. He SC, Thiyagaraja V, Bhunjun CS, Jayawardena RS, Chomnunti P, Al-Otibi F, Zhao YW, Zhao Q, Hyde KD. 2024a. A new Myxospora (Hypocreales, Sordariomycetes) species from the Tibetan Plateau, China. N Z J Bot. 1–17. doi: 10.1080/0028825X.2024.2438411. [DOI] [Google Scholar]
  27. He SC, Wei DP, Bhunjun CS, Apurillo CCS, Thiyagaraja V, Jayawardena RS, Zhao YW, Zhao Q. 2024b. A new species of Neotorula (Pleosporales) from the Southwest, China. Phytotaxa. 662(3):251–261. doi: 10.11646/phytotaxa.662.3.4. [DOI] [Google Scholar]
  28. He SC, Wei DP, Bhunjun CS, Jayawardena RS, Thiyagaraja V, Zhao Q, Al-Otibi F, Hyde KD. 2024c. Morphology and multi-gene phylogeny reveal a new species of family Torulaceae from Yunnan Province, China. Diversity. 16(9):551. doi: 10.3390/d16090551. [DOI] [Google Scholar]
  29. He SC, Wei DP, Bhunjun CS, Zhao Q, Jayawardena RS. 2023. A new species of Stephanonectria (Bionectriaceae) from southwestern China. Asian J Mycol. 6:98–106. doi: 10.5943/ajom/6/1/9. [DOI] [Google Scholar]
  30. Hernández-Restrepo M, Gené J, Castañeda-Ruiz RF, Mena-Portales J, Crous PW, Guarro J. 2017. Phylogeny of saprobic microfungal from Southern Europe. Stud Mycol. 86:53–97. doi: 10.1016/j.simyco.2017.05.002. [DOI] [PMC free article] [PubMed] [Google Scholar]
  31. Hongsanan S, Hyde KD, Phookamsak R, Wanasinghe DN, McKenzie EHC, Sarma VV, Boonmee S, Lücking R, Bhat DJ, Liu NG, et al. 2020. Refined families of Dothideomycetes: Dothideomycetidae and Pleosporomycetidae. Mycosphere. 11(1):1553–2107. doi: 10.5943/MYCOSPHERE/11/1/13. [DOI] [Google Scholar]
  32. Hosoya T, Yano M. 2020. Notes on two new records of Mycobiota in Japan, Kostermansinda nana and Durella macrospora. Bull Natl Mus Nat Sci, Ser B. 46(3):95–100. [Google Scholar]
  33. Huang H, Luo Z, Yue HM, Gong WF, Cai L, Wang M. 2015. Pochonia cordycepisociata, a new species associated with Chinese Cordyceps in Tibet, China. Phytotaxa. 208(4):278–286. doi: 10.11646/phytotaxa.208.4.3. [DOI] [Google Scholar]
  34. Huelsenbeck JP, Ronquist F. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics. 17(8):754–755. doi: 10.1093/bioinformatics/17.8.754. [DOI] [PubMed] [Google Scholar]
  35. Hyde KD, Baldrian P, Chen Y, Chethana KWT, De HS, Doilom M, de Farias AR, Gonçalves MF, Gonkhom D, Gui H, et al. 2024a. Current trends, limitations and future research in the fungi? Fungal Divers. 125(1):1–71. doi: 10.1007/s13225-023-00532-5. [DOI] [Google Scholar]
  36. Hyde KD, Chaiwan N, Norphanphoun C, Boonmee S, Camporesi E, Chethana KWT, Dayarathne MC, de Silva NI, Dissanayake AJ, Ekanayaka AH, et al. 2018. Mycosphere notes 169–224. Mycosphere. 9(2):271–430. doi: 10.5943/mycosphere/9/2/8. [DOI] [Google Scholar]
  37. Hyde KD, Dong Y, Phookamsak R, Jeewon R, Bhat DJ, Jones EG, Liu NG, Abeywickrama PD, Mapook A, Wei DP, et al. 2020. Fungal diversity notes 1151–1276: taxonomic and phylogenetic contributions on genera and species of fungal taxa. Fungal Divers. 100(1):5–277. doi: 10.1007/s13225-020-00439-5. [DOI] [Google Scholar]
  38. Hyde KD, Jones EBG, Liu JK, Ariyawansa H, Boehm E, Boonmee S, Braun U, Chomnunti P, Crous PW, Dai DQ, et al. 2013. Families of Dothideomycetes. Fungal Divers. 63(1):1–313. doi: 10.1007/s13225-013-0263-4. [DOI] [Google Scholar]
  39. Hyde KD, Noorabadi MT, Thiyagaraja V, He MQ, Johnston PR, Wijesinghe SN, Armand A, Biketova AY, Chethana KWT, Erdoğdu M, et al. 2024b. The 2024 outline of fungi and fungus-like taxa. Mycosphere. 15(1):5146–6239. doi: 10.5943/mycosphere/15/1/25. [DOI] [Google Scholar]
  40. Hyde KD, Norphanphoun C, Abreu VP, Bazzicalupo A, Thilini Chethana KW, Clericuzio M, Dayarathne MC, Dissanayake AJ, Ekanayaka AH, He MQ, et al. 2017. Fungal diversity notes 603–708: taxonomic and phylogenetic notes on genera and species. Fungal Divers. 87(1):1–235. doi: 10.1007/s13225-017-0391-3. [DOI] [Google Scholar]
  41. Hyde KD, Norphanphoun C, Ma J, Yang HD, Zhang JY, Du TY, Gao Y, Gomes de Farias AR, Gui H, He SC, et al. 2023. Mycosphere notes 387–412 – novel species of fungal taxa from around the world. Mycosphere. 14(1):663–744. doi: 10.5943/mycosphere/14/1/8. [DOI] [Google Scholar]
  42. Hyde KD, Suwannarach N, Jayawardena RS, Manawasinghe IS, Liao CF, Doilom M, Cai L, Zhao P, Buyck B, Phukhamsakda C, et al. 2021. Mycosphere notes 325–344 – novel species and records of fungal taxa from around the world. Mycosphere. 12(1):1101–1156. doi: 10.5943/mycosphere/12/1/14. [DOI] [Google Scholar]
  43. Jayasiri SC, Hyde KD, Ariyawansa HA, Bhat J, Buyck B, Cai L, Dai YC, Abd-Elsalam KA, Ertz D, Hidayat I, et al. 2015. The faces of fungi database: fungal names linked with morphology, phylogeny and human impacts. Fungal Divers. 74(1):3–18. doi: 10.1007/s13225-015-0351-8. [DOI] [Google Scholar]
  44. Jayawardena RS, Hyde KD, Aumentado HDR, Abeywickrama PD, Avasti S, Dissanayake AJ, Gautam AK, Gayanayake AJ, Armand A, Balendres MAO, et al. 2025. One stop shop V: taxonomic update with molecular phylogeny for important phytopathogenic genera: 101–125 (2024). Fungal Divers. 130(1):263–429. doi: 10.1007/s13225-024-00542-x. [DOI] [Google Scholar]
  45. Jayawardena RS, Hyde KD, Jeewon R, Ghobad-Nejhad M, Wanasinghe DN, Liu N, Phillips AJ, Oliveira-Filho JR, da Silva GA, Gibertoni TB, et al. 2019a. One stop shop II: taxonomic update with molecular phylogeny for important phytopathogenic genera: 26–50 (2019). Fungal Divers. 94(1):41–129. doi: 10.1007/s13225-019-00418-5. [DOI] [Google Scholar]
  46. Jayawardena RS, Hyde KD, McKenzie EH, Jeewon R, Phillips AJ, Perera RH, de Silva NI, Maharachchikumburua SS, Samarakoon MC, Ekanayake AH, et al. 2019b. One stop shop III: taxonomic update with molecular phylogeny for important phytopathogenic genera: 51–75 (2019). Fungal Divers. 98(1):77–160. doi: 10.1007/s13225-019-00433-6. [DOI] [Google Scholar]
  47. Jayawardena RS, Hyde KD, Wang S, Sun YR, Suwannarach N, Sysouphanthong P, Abdel-Wahab MA, Abdel-Aziz FA, Abeywickrama PD, Abreu VP, et al. 2022. Fungal diversity notes 1512–1610: taxonomic and phylogenetic contributions on genera and species of fungal taxa. Fungal Divers. 117(1):1–272. doi: 10.1007/s13225-022-00513-0. [DOI] [PMC free article] [PubMed] [Google Scholar]
  48. Katoh K, Kuma K, Toh H, Miyata T. 2005. MAFFT version 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Res. 33(2):511–518. doi: 10.1093/nar/gki198. [DOI] [PMC free article] [PubMed] [Google Scholar]
  49. Kodsueb R, Dhanasekaran V, Aptroot A, Lumyong S, McKenzie EH, Hyde KD, Jeewon R. 2006. The family Pleosporaceae: intergeneric relationships and phylogenetic perspectives based on sequence analyses of partial 28S rDNA. Mycologia. 98(4):571–583. doi: 10.3852/mycologia.98.4.571. [DOI] [PubMed] [Google Scholar]
  50. Kolomiets T, Pankratova L, Mukhina Z, Kassanelly D, Matveeva T, Bogomaz D, Berner D. 2008. First report of leaf spot caused by Periconia igniaria on yellow starthistle in Russia. Plant Dis. 92(6):983. doi: 10.1094/PDIS-92-6-0983A. [DOI] [PubMed] [Google Scholar]
  51. Konta S, Tibpromma S, Karunarathna SC, Samarakoon MC, Steven LS, Mapook A, Boonmee S, Senwanna C, Balasuriya A, Eungwanichayapant PD, et al. 2023. Morphology and multigene phylogeny reveal ten novel taxa in Ascomycota from terrestrial palm substrates (Arecaceae) in Thailand. Mycosphere. 14(1):107–152. doi: 10.5943/mycosphere/14/1/2. [DOI] [Google Scholar]
  52. Kuo CH, Goh TK. 2019. Ellisembia acicularia sp. nov. and four new records of freshwater hyphomycetes from streams in the Alishan area, Chiayi County, Taiwan. Nova Hedwigia. 108(1–2):185–196. doi: 10.1127/nova_hedwigia/2018/0493. [DOI] [Google Scholar]
  53. Li WL, Bao DF, Liu NG, Hyde KD, Liu JK. 2021. Aquatisphaeria thailandica gen. et sp. nov. (Tetraplosphaeriaceae, Pleosporales) from freshwater habitat in Thailand. Phytotaxa. 513(2):118–128. doi: 10.11646/phytotaxa.513.2.3. [DOI] [Google Scholar]
  54. Liao CF, Hyde KD, Chethana KWT, Dong W, Yang YH, Doilom M. 2024. Three new Periconia species isolated from Wurfbainia villosa in Guangdong, China: a discussion on the doubtful taxa clustering in this genus. Diversity. 16(3):141. doi: 10.3390/d16030141. [DOI] [Google Scholar]
  55. Liu F, Ma ZY, Hou LW, Diao YZ, Wu WP, Damm U, Song S, Cai L. 2022. Updating species diversity of Colletotrichum, with a phylogenomic overview. Stud Mycol. 101(1):1–56. doi: 10.3114/sim.2022.101.01. [DOI] [PMC free article] [PubMed] [Google Scholar]
  56. Liu LL, Long QD, Kang JC, Zhang X, Hyde KD, Shen XC, Li QR. 2018. Morphology and phylogeny of Mycopepon. Mycosphere. 9(4):779–789. doi: 10.5943/mycosphere/9/4/6. [DOI] [Google Scholar]
  57. Liu YJ, Whelen S, Hall BD. 1999. Phylogenetic relationships among ascomycetes: evidence from an RNA polymerse II subunit. Mol Biol Evol. 16(12):1799–1808. doi: 10.1093/oxfordjournals.molbev.a026092. [DOI] [PubMed] [Google Scholar]
  58. Louangphan J, Perera RH, Gomes De Farias AR. 2024. A new addition to Kirschsteiniotheliaceae: Kirschsteiniothelia chiangmaiensis sp. nov. from Northern Thailand. Phytotaxa. 634(1):49–62. doi: 10.11646/phytotaxa.634.1.4. [DOI] [Google Scholar]
  59. Luo ZL, Bao DF, Li LL, Luan S, Su HY. 2022. Xenoastrosphaeriella aquatica sp. nov. from freshwater habitat in Yunnan Province, China. Phytotaxa. 544(2):193–200. doi: 10.11646/phytotaxa.544.2.5. [DOI] [Google Scholar]
  60. Ma C, He SC, Cai T, Li CJY, Yu FM, Wang ZY, Zhang Y, Zhao Q. 2025. A new species of Stachylidium (Trichosphaeriaceae) from Xizang, China. Phytotaxa. 694(1):77–85. doi: 10.11646/phytotaxa.694.1.6. [DOI] [Google Scholar]
  61. Ma HX, Yang ZE, Song ZK, Qu Z, Li Y, Zhu AH. 2023. Taxonomic and phylogenetic contributions to Diatrypaceae from southeastern Tibet in China. Front Microbiol. 14:1073548. doi: 10.3389/fmicb.2023.1073548. [DOI] [PMC free article] [PubMed] [Google Scholar]
  62. Markham WD, Key RD, Padhye AA, Ajello L. 1990. Phaeohyphomycotic cyst caused by Tetraploa aristata. Med Mycol. 28(2):147–150. doi: 10.1080/02681219080000191. [DOI] [PubMed] [Google Scholar]
  63. Miller MA, Pfeiffer W, Schwartz T. 2010. Creating the CIPRES science gateway for inference of large phylogenetic trees. In: 2010 gateway computing environments workshop (GCE). 1–8. doi: 10.1109/GCE.2010.5676129. [DOI] [Google Scholar]
  64. Morgan-Jones G, Sinclair RC, Eicker A. 1987. Notes on Hyphomycetes. LV Craneomvces gen. nov. and Trichobotrys effusa. Mycotaxon. 30:345–350. [Google Scholar]
  65. O’Donnell K, Cigelnik E. 1997. Two divergent intragenomic rDNA ITS2 types within a monophyletic lineage of the fungus Fusarium are nonorthologous. Mol Phylogenet Evol. 7(1):103–116. doi: 10.1006/mpev.1996.0376. [DOI] [PubMed] [Google Scholar]
  66. Pem D, Hyde KD, McKenzie EHC, Hongsanan S, Wanasinghe DN, Boonmee S, Darmostuk V, Bhat JD, Tian Q, Htet ZH, et al. 2024. A comprehensive overview of genera in Dothideomycetes. Mycosphere. 15(1):2175–4568. doi: 10.5943/mycosphere/15/1/18. [DOI] [Google Scholar]
  67. Pem D, Jeewon R, Bhat DJ, Doilom M, Boonmee S, Hongsanan S, Promputtha I, Xu JC, Hyde KD. 2019. Mycosphere notes 275–324: a morpho-taxonomic revision and typification of obscure Dothideomycetes genera (incertae sedis). Mycosphere. 10(1):1115–1246. doi: 10.5943/mycosphere/10/1/22. [DOI] [Google Scholar]
  68. Penzig AJO, Saccardo PA. 1902. Diagnoses fungorum novorum in insula Java collectorum. Ser Tertia. Malpighia. 15(7–9):201–260. [Google Scholar]
  69. Phookamsak R, Hongsanan S, Bhat DJ, Wanasinghe DN, Promputtha I, Suwannarach N, Kumla J, Xie N, Dawoud TM, Mortimer PE, et al. 2024. Exploring ascomycete diversity in Yunnan II: introducing three novel species in the suborder Massarineae (Dothideomycetes, Pleosporales) from fern and grasses. MycoKeys. 104:9–50. doi: 10.3897/mycokeys.104.112149. [DOI] [PMC free article] [PubMed] [Google Scholar]
  70. Phookamsak R, Hyde KD, Jeewon R, Bhat DJ, Maharachchikumbura SS, Raspé O, Karunarathna SC, Wanasinghe DN, Hongsanan S, Doilom M. 2019. Fungal diversity notes 929–1035: taxonomic and phylogenetic contributions on genera and species of fungi. Fungal Divers. 95(1):1–273. doi: 10.1007/s13225-019-00421-w. [DOI] [Google Scholar]
  71. Phurbu D, Huang JE, Song S, Ni Z, Zhou X, Li S, Cai L, Liu F. 2024. Diversity of culturable fungi in six Tibetan Plateau lakes, with descriptions of eight new taxa. Mycology. 1–20. doi: 10.1080/21501203.2024.2333300. [DOI] [PMC free article] [PubMed] [Google Scholar]
  72. Qiu L, Hu YF, Liu JW, Xia JW, Castañeda-Ruíz RF, Xu ZH, Ma J. 2022. Phylogenetic placement of new species and combinations of Neopodoconis within Torulaceae. Res Square. 1–21. doi: 10.21203/rs.3.rs-1755529/v1. [DOI] [Google Scholar]
  73. Ren PC, Mu W, Xiao LU. 2016. A review of investigation of fungi in Tibet. Mycosystema. 35(9):1025–1047. doi: 10.13346/j.mycosystema.150158. [DOI] [Google Scholar]
  74. Rifai MA. 1968. Kostermansinda Rifai genus novum hyphomycetarum. Reinwardtia. 7:375–381. doi: 10.55981/reinwardtia.1968.980. [DOI] [Google Scholar]
  75. Ronquist F, Teslenko M, Van Der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. 2012. Mrbayes 3.2: efficient bayesian phylogenetic inference and model choice across a large model space. Systematic Biol. 61(3):539–542. doi: 10.1093/sysbio/sys029. [DOI] [PMC free article] [PubMed] [Google Scholar]
  76. Sarkar T, Chakraborty P, Karmakar A, Saha A, Saha D. 2019. First report of Periconia macrospinosa causing leaf necrosis of pointed gourd in India. J Pathol. 101(4):1281. doi: 10.1007/s42161-019-00348-w. [DOI] [Google Scholar]
  77. Senanayake IC, Achala RR, Diana SM, Mark SC, Eleni G, Hyang Burm L, Vedprakash GH, Dhandevi P, Lakmali SD, Subodini NW, et al. 2020. Morphological approaches in studying fungi: collection, examination, isolation, sporulation and preservation. Mycosphere. 11(1):2678–2754. doi: 10.5943/mycosphere/11/1/20. [DOI] [Google Scholar]
  78. Senanayake IC, Rossi W, Leonardi M, Weir A, McHugh M, Rajeshkumar KC, Verma RK, Karunarathna SC, Tibpromma S, Ashtekar N, et al. 2023. Fungal diversity notes 1611–1716: taxonomic and phylogenetic contributions on fungal genera and species emphasis in south China. Fungal Divers. 122(1):161–403. doi: 10.1007/s13225-023-00523-6. [DOI] [Google Scholar]
  79. Shi H, Wang X, Zhou Y, Liu D, Zhang Y, Yang M, Timdal E, Wang L. 2018. Three new species and one new combination of Gypsoplaca (lichenized Ascomycota) from the Hengduan Mountains in China. Mycol Prog. 17(7):781–790. doi: 10.1007/s11557-018-1396-3. [DOI] [Google Scholar]
  80. Su L, Guo L, Hao Y, Xiang M, Cai L, Liu X. 2015. Rupestriomyces and Spissiomyces, two new genera of rock-inhabiting fungi from China. Mycologia. 107(4):831–844. doi: 10.3852/14-305. [DOI] [PubMed] [Google Scholar]
  81. Su PW, Lu ZH, Tian WH, Chen YP, Maharachchikumbura SS. 2023. Six additions to the genus Periconia (Dothideomycetes: Periconiaceae) from graminaceous plants in China. J Fungi. 9(3):300. doi: 10.3390/jof9030300. [DOI] [PMC free article] [PubMed] [Google Scholar]
  82. Suetrong S, Schoch CL, Spatafora JW, Sakayaroj J. 2009. Molecular systematics of the marine Dothideomycetes. Stud Mycol. 64:155–173. doi: 10.3114/sim.2009.64.09. [DOI] [PMC free article] [PubMed] [Google Scholar]
  83. Sun BB, He SC, Yu FM, Li CJY, Yang YY, Wang JR, Zhao Q. 2025. A new species of Periconia (Periconiaceae, Pleosporales) from Xizang, China. Phytotaxa. 693(2):133–145. doi: 10.11646/phytotaxa.693.2.2. [DOI] [Google Scholar]
  84. Tanaka K, Hirayama K, Yonezawa H, Hatakeyama S, Harada Y, Sano T, Shirouzu T, Hosoya T. 2009. Molecular taxonomy of bambusicolous fungi: Tetraplosphaeriaceae, a new pleosporalean family with Tetraploa-like anamorphs. Stud Mycol. 64:175–209. doi: 10.3114/sim.2009.64.10. [DOI] [PMC free article] [PubMed] [Google Scholar]
  85. Tanaka K, Hirayama K, Yonezawa H, Sato G, Toriyabe A, Kudo H, Hashimoto A, Matsumura M, Harada Y, Kurihara Y, et al. 2015. Revision of the Massarineae (Pleosporales, Dothideomycetes). Stud Mycol. 82(1):75–136. doi: 10.1016/j.simyco.2015.10.002. [DOI] [PMC free article] [PubMed] [Google Scholar]
  86. Tang X, Jeewon R, Jayawardena RS, Gomdola D, Lu YZ, Xu RJ, Alrefaei AF, Al-Otibi F, Hyde KD, Kang JC. 2024. Additions to the genus Kirschsteiniothelia (Dothideomycetes); three novel species and a new host record, based on morphology and phylogeny. MycoKeys. 110:35–66. doi: 10.3897/mycokeys.110.133450. [DOI] [PMC free article] [PubMed] [Google Scholar]
  87. Tang X, Jeewon R, Lu YZ, Alrefaei AF, Jayawardena RS, Xu RJ, Ma J, Chen XM, Kang JC. 2023. Morphophylogenetic evidence reveals four new fungal species within Tetraplosphaeriaceae (Pleosporales, Ascomycota) from tropical and subtropical forest in China. MycoKeys. 100:153–170. doi: 10.3897/mycokeys.100.113141. [DOI] [PMC free article] [PubMed] [Google Scholar]
  88. Telle S, Thines M. 2008. Amplification of cox2 (~620 bp) from 2 mg of up to 129 years old herbarium specimens, comparing 19 extraction methods and 15 polymerases. PLOS One. 3(10):e3584. doi: 10.1371/journal.pone.0003584. [DOI] [PMC free article] [PubMed] [Google Scholar]
  89. Thiyagaraja V, He SC, Luo L, Meng QF, Yang HD, Yang YY. 2024. Research profiles – I: the research of Vinodhini Thiyagaraja and her team at Kunming Institute of Botany, CAS, P.R. China. Curr Res Environ Appl Mycol. 14(1):49–62. doi: 10.5943/cream/14/1/2. [DOI] [Google Scholar]
  90. Tian W, Su P, Chen Y, Maharachchikumbura SSN. 2023. Four new species of Torula (Torulaceae, Pleosporales) from Sichuan, China. J Fungi. 9(2):150. doi: 10.3390/jof9020150. [DOI] [PMC free article] [PubMed] [Google Scholar]
  91. Tian XG, Bao DF, Karunarathna SC, Jayawardena RS, Hyde KD, Bhat DJ, Luo ZL, Elgorban AM, Hongsanan S, Rajeshkumar KC, et al. 2024. Taxonomy and phylogeny of ascomycetes associated with selected economically important monocotyledons in China and Thailand. Mycosphere. 15(1):1–274. doi: 10.5943/mycosphere/15/1/1. [DOI] [Google Scholar]
  92. Tibpromma S, Hyde KD, Bhat JD, Mortimer PE, Xu J, Promputtha I, Doilom M, Yang JB, Tang AM, Karunarathna SC. 2018. Identification of endophytic fungi from leaves of pandanaceae based on their morphotypes and DNA sequence data from southern Thailand. MycoKeys. 28(33):25. doi: 10.3897/mycokeys.32.23670. [DOI] [PMC free article] [PubMed] [Google Scholar]
  93. Timdal E, Obermayer W, Bendiksby M. 2016. Psora altotibetica (Psoraceae, Lecanorales), a new lichen species from the Tibetan part of the Himalayas. MycoKeys. 13:35–48. doi: 10.3897/mycokeys.13.8824. [DOI] [Google Scholar]
  94. Tode HJ. 1791. Fungi Mecklenburgenses Selecti. 2:1–64. [Google Scholar]
  95. Vaidya G, Lohman DJ, Meier R. 2011. SequenceMatrix: concatenation software for the fast assembly of multi-gene datasets with character set and codon information. Cladistics. 27(2):171–180. doi: 10.1111/j.1096-0031.2010.00329.x. [DOI] [PubMed] [Google Scholar]
  96. Vilgalys R, Hester M. 1990. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol. 172(8):4238–4246. doi: 10.1128/jb.172.8.4238-4246.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
  97. Wanasinghe DN, Jeewon R, Gareth Jones EB, Boonmee S, Kaewchai S, Manawasinghe IS, Lumyong S, Hyde KD. 2018. Novel palmicolous taxa within Pleosporales: multigene phylogeny and taxonomic circumscription. Mycol Prog. 17(5):571–590. doi: 10.1007/s11557-018-1379-4. [DOI] [Google Scholar]
  98. Wang GS, Cai Q, Hao YJ, Bau T, Chen ZH, Li MX, David N, Kraisitudomsook N, Yang ZL. 2024a. Phylogenetic and taxonomic updates of Agaricales, with an emphasis on Tricholomopsis. Mycology. 15(2):180–209. doi: 10.1080/21501203.2023.2263031. [DOI] [PMC free article] [PubMed] [Google Scholar]
  99. Wang HR, Yang MA, Wangdue S, Lu HL, Chen HH, Li LH, Dong GH, Tsring T, Yuan HB, He W, et al. 2023a. Human genetic history on the Tibetan Plateau in the past 5100 years. Sci Adv. 9(11):1–17. doi: 10.1126/sciadv.add5582. [DOI] [PMC free article] [PubMed] [Google Scholar]
  100. Wang SH, Li GJ, Phurbu D, He MQ, Zhang MZ, Zhu XY, Li JX, Zhao RL, Cao B. 2024b. Four new species of Russula from the Xizang Autonomous Region and other provinces of China. Mycology. 15(2):210–237. doi: 10.1080/21501203.2023.2265667. [DOI] [PMC free article] [PubMed] [Google Scholar]
  101. Wang WP, Shen HW, Bao DF, Lu YZ, Yang QX, Su XJ, Luo ZL. 2023b. Two novel species and three new records of Torulaceae from Yunnan Province, China. MycoKeys. 99:1–24. doi: 10.3897/mycokeys.99.106699. [DOI] [PMC free article] [PubMed] [Google Scholar]
  102. Wang Z, Cui G, Liu X, Zheng K, Lu Z, Li H, Wang G, An Z. 2021. Greening of the Qinghai-Tibet plateau and its response to climate variations along elevation gradients. Remote Sens-Basel. 13(18):3712. doi: 10.3390/rs13183712. [DOI] [Google Scholar]
  103. White TJ, Bruns T, Lee S, Taylor J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics 315–322. USA: Academic Press. doi: 10.1016/B978-0-12-372180-8.50042-1. [DOI] [Google Scholar]
  104. Wijayawardene NN, Hyde KD, Camporesi E, Jayarama Bhat D, Song Y, Chukeatirote E, Wang Y, Zhang JH. 2014. Homortomyces tamaricis sp. nov. and convergent evolution of Homortomyces and Stilbospora. Phytotaxa. 176(1):156–163. doi: 10.11646/phytotaxa.176.1.15. [DOI] [Google Scholar]
  105. Xiao XJ, Liu NG, Ma J, Zhang LJ, Bao DF, Bai S, Al-Otibi F, Hyde KD, Lu YZ. 2025. Three new asexual kirschsteiniothelia species from Guizhou Province, China. MycoKeys. 113:147–168. doi: 10.3897/mycokeys.113.139427. [DOI] [PMC free article] [PubMed] [Google Scholar]
  106. Xu K, Xu RJ, Li JN, Zhao Q, Zhu YA. 2024a. A novel species of Phaeoisaria (Pleurotheciaceae, Sordariomycetes) from the Tibetan Plateau, China. Phytotaxa. 642(1):61–72. doi: 10.11646/phytotaxa.642.1.5. [DOI] [Google Scholar]
  107. Xu RF, Phukhamsakda C, Dai DQ, Karunarathna SC, Tibpromma S. 2023a. Kirschsteiniothelia xishuangbannaensis sp. nov. from pará rubber (Hevea brasiliensis) in Yunnan, China. Curr Res Environ Appl Mycol. 13(1):34–56. doi: 10.5943/CREAM/13/1/3. [DOI] [Google Scholar]
  108. Xu RJ, Li JF, Zhou DQ, Boonmee S, Zhao Q, Chen YY. 2024b. Three novel species of Aquapteridospora (Distoseptisporales, Aquapteridosporaceae) from freshwater habitats in Tibetan Plateau, China. MycoKeys. 102:183–200. doi: 10.3897/mycokeys.102.112905. [DOI] [PMC free article] [PubMed] [Google Scholar]
  109. Xu RJ, Zhu YA, Liu NG, Boonmee S, Zhou DQ, Zhao Q. 2023b. Taxonomy and phylogeny of Hyphomycetous Muriform conidial taxa from the Tibetan Plateau, China. J Fungi. 9(5):560. doi: 10.3390/jof9050560. [DOI] [PMC free article] [PubMed] [Google Scholar]
  110. Yang EF, Phookamsak R, Jiang HB, Tibpromma S, Bhat DJ, Karunarathna SC, Dai DQ, Xu JC, Promputtha I. 2022. Taxonomic reappraisal of Periconiaceae with the description of three new Periconia species from China. J Fungi. 8(3):243. doi: 10.3390/jof8030243. [DOI] [PMC free article] [PubMed] [Google Scholar]
  111. Yang M, Nelson FE, Shiklomanov NI, Guo D, Wan G. 2010. Permafrost degradation and its environmental effects on the Tibetan Plateau: a review of recent research. Earth-Scirev. 103:31–44. doi: 10.1016/j.earscirev.2010.07.002. [DOI] [Google Scholar]
  112. Yang T, Adams JM, Shi Y, He JS, Jing X, Chen L, Tedersoo L, Chu H. 2017. Soil fungal diversity in natural grasslands of the Tibetan Plateau: associations with plant diversity and productivity. The New Phytol. 215(2):756–765. doi: 10.1111/nph.14606. [DOI] [PubMed] [Google Scholar]
  113. Zhan T, Zhao W, Feng S, Hua T. 2022. Plant community traits respond to grazing exclusion duration in alpine meadow and alpine steppe on the Tibetan Plateau. Front Plant Sci. 13:863246. doi: 10.3389/fpls.2022.863246. [DOI] [PMC free article] [PubMed] [Google Scholar]
  114. Zhang JF, Liu JK, Hyde KD, Chen YY, Ran HY, Liu ZY. 2023. Ascomycetes from karst landscapes of Guizhou Province, China. Fungal Divers. 122(1):1–160. doi: 10.1007/s13225-023-00524-5. [DOI] [Google Scholar]
  115. Zhang WJ, Xu GP, Liu Y, Gao Y, Song HY, Hu HJ, Zhou JP, Chen MH, Fan DM, Hu DM, et al. 2024. Multi-gene phylogenetic analyses revealed two novel species and one new record of Trichobotrys (Pleosporales, Dictyosporiaceae) from China. MycoKeys. 106:117–132. doi: 10.3897/mycokeys.106.123279. [DOI] [PMC free article] [PubMed] [Google Scholar]
  116. Zhang Y, Crous PW, Schoch CL, Hyde KD. 2012. Pleosporales. Fungal Divers. 53:1–221. doi: 10.1007/s13225-011-0117-x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  117. Zhao Q, Brooks S, Zhao YC, Yang ZL, Hyde KD. 2016. Morphology and phylogenic position of Wynnella subalpina sp. nov. (Helvellaceae) from western China. Phytotaxa. 270(1):41–48. doi: 10.11646/phytotaxa.270.1.4. [DOI] [Google Scholar]

Articles from Mycology are provided here courtesy of Taylor & Francis

RESOURCES