Skip to main content
Genetics logoLink to Genetics
. 2000 Mar;154(3):1141–1153. doi: 10.1093/genetics/154.3.1141

Tetrahymena micronuclear genome mapping. a high-resolution meiotic map of chromosome 1l.

S Wickert 1, E Orias 1
PMCID: PMC1460991  PMID: 10757759

Abstract

The ciliate Tetrahymena thermophila is a useful model organism that combines diverse experimental advantages with powerful capabilities for genetic manipulation. The genetics of Tetrahymena are especially rich among eukaryotic cells, because it possesses two distinct but related nuclear genomes within one cytoplasm, contained separately in the micronucleus (MIC) and the macronucleus (MAC). In an effort to advance fulfillment of Tetrahymena's potential as a genetic system, we are mapping both genomes and investigating the correspondence between them. With the latter goal especially in mind, we report here a high-resolution meiotic linkage map of the left arm of chromosome 1, one of Tetrahymena's five chromosomes. The map consists of 40 markers, with an average spacing of 2.3 cM in the Haldane function and a total length of 88.6 cM. This study represents the first mapping of any large region of the Tetrahymena genome that has been done at this level of detail. Results of a parallel mapping effort in the macronucleus, and the correspondence between the two genomes, can be found in this issue as a companion to this article.

Full Text

The Full Text of this article is available as a PDF (195.2 KB).

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Bleyman L. K., Baum M. P., Bruns P. J., Orias E. Mapping the mating type locus of Tetrahymena thermophila: meiotic linkage of mat to the ribosomal RNA gene. Dev Genet. 1992;13(1):34–40. doi: 10.1002/dvg.1020130106. [DOI] [PubMed] [Google Scholar]
  2. Brickner J. H., Lynch T. J., Zeilinger D., Orias E. Identification, mapping and linkage analysis of randomly amplified DNA polymorphisms in Tetrahymena thermophila. Genetics. 1996 Jun;143(2):811–821. doi: 10.1093/genetics/143.2.811. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Bruns P. J., Brussard T. E. Nullisomic tetrahymena: eliminating germinal chromosomes. Science. 1981 Jul 31;213(4507):549–551. doi: 10.1126/science.213.4507.549. [DOI] [PubMed] [Google Scholar]
  4. Buetow K. H. Influence of aberrant observations on high-resolution linkage analysis outcomes. Am J Hum Genet. 1991 Nov;49(5):985–994. [PMC free article] [PubMed] [Google Scholar]
  5. Chakravarti A., Lasher L. K., Reefer J. E. A maximum likelihood method for estimating genome length using genetic linkage data. Genetics. 1991 May;128(1):175–182. doi: 10.1093/genetics/128.1.175. [DOI] [PMC free article] [PubMed] [Google Scholar]
  6. Lander E. S., Green P., Abrahamson J., Barlow A., Daly M. J., Lincoln S. E., Newberg L. A., Newburg L. MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics. 1987 Oct;1(2):174–181. doi: 10.1016/0888-7543(87)90010-3. [DOI] [PubMed] [Google Scholar]
  7. Lincoln S. E., Lander E. S. Systematic detection of errors in genetic linkage data. Genomics. 1992 Nov;14(3):604–610. doi: 10.1016/s0888-7543(05)80158-2. [DOI] [PubMed] [Google Scholar]
  8. Lynch T. J., Brickner J., Nakano K. J., Orias E. Genetic map of randomly amplified DNA polymorphisms closely linked to the mating type locus of Tetrahymena thermophila. Genetics. 1995 Dec;141(4):1315–1325. doi: 10.1093/genetics/141.4.1315. [DOI] [PMC free article] [PubMed] [Google Scholar]
  9. Orias E. Mapping the germ-line and somatic genomes of a ciliated protozoan, Tetrahymena thermophila. Genome Res. 1998 Feb;8(2):91–99. doi: 10.1101/gr.8.2.91. [DOI] [PubMed] [Google Scholar]
  10. Prescott D. M. The DNA of ciliated protozoa. Microbiol Rev. 1994 Jun;58(2):233–267. doi: 10.1128/mr.58.2.233-267.1994. [DOI] [PMC free article] [PubMed] [Google Scholar]
  11. Weeks D. E., Nygaard T. G., Neystat M., Harby L. D., Wilhelmsen K. C. A high-resolution genetic linkage map of the pericentromeric region of the human X chromosome. Genomics. 1995 Mar 1;26(1):39–46. doi: 10.1016/0888-7543(95)80080-6. [DOI] [PubMed] [Google Scholar]
  12. Wickert S., Nangle L., Shevel S., Orias E. Tetrahymena macronuclear genome mapping: colinearity Of macronuclear coassortment groups and the micronuclear map on chromosome 1l. Genetics. 2000 Mar;154(3):1155–1167. doi: 10.1093/genetics/154.3.1155. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Williams J. G., Kubelik A. R., Livak K. J., Rafalski J. A., Tingey S. V. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res. 1990 Nov 25;18(22):6531–6535. doi: 10.1093/nar/18.22.6531. [DOI] [PMC free article] [PubMed] [Google Scholar]

Articles from Genetics are provided here courtesy of Oxford University Press

RESOURCES