Skip to main content
Clinical and Experimental Immunology logoLink to Clinical and Experimental Immunology
. 1993 Oct;94(1):84–90. doi: 10.1111/j.1365-2249.1993.tb05982.x

Novel human immunoglobulin heavy chain constant region gene deletion haplotypes characterized by pulsed-field electrophoresis.

P G Olsson 1, H Rabbani 1, L Hammarström 1, C I Smith 1
PMCID: PMC1534385  PMID: 8403523

Abstract

Fifteen patients with selective IgG1 deficiency were screened for immunoglobulin H chain C region locus (IGHC) gene deletions and three deletion haplotypes were found: del G1, del G1-G4 and del G4. These haplotypes, together with four deletion haplotypes described by us previously (del G1 (NY), del G1 (VIT) del G1-G2 (NY) and del G2-G4 (HJE)), were further characterized using pulsed-field gel electrophoresis (PFGE) to determine the physical extent of the deletions. The MluI fragment sizes confirmed the deletions, although the deduced sizes of the most extensive deletions indicated that material had been inserted into the locus.

Full text

PDF
89

Images in this article

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Bottaro A., Cariota U., DeMarchi M., Carbonara A. O. Pulsed-field electrophoresis screening for immunoglobulin heavy-chain constant-region (IGHC) multigene deletions and duplications. Am J Hum Genet. 1991 Apr;48(4):745–756. [PMC free article] [PubMed] [Google Scholar]
  2. Bottaro A., Cariota U., de Lange G. G., DeMarchi M., Gallina R., Oliviero S., Vlug A., Carbonara A. O. Multiple levels of analysis of an IGHG4 gene deletion. Hum Genet. 1990 Dec;86(2):191–197. doi: 10.1007/BF00197704. [DOI] [PubMed] [Google Scholar]
  3. Bottaro A., De Marchi M., De Lange G., Boccazzi C., Caldesi F., Gallina R., Carbonara A. O. New types of multiple and single gene deletions in the human IgCH locus. Immunogenetics. 1989;29(1):44–48. doi: 10.1007/BF02341612. [DOI] [PubMed] [Google Scholar]
  4. Bottaro A., de Marchi M., Migone N., Carbonara A. O. Pulsed-field gel analysis of human immunoglobulin heavy-chain constant region gene deletions reveals the extent of unmapped regions within the locus. Genomics. 1989 May;4(4):505–508. doi: 10.1016/0888-7543(89)90273-5. [DOI] [PubMed] [Google Scholar]
  5. Chaabani H., Bech-Hansen N. T., Cox D. W. A multigene deletion within the immunoglobulin heavy-chain region. Am J Hum Genet. 1985 Nov;37(6):1164–1171. [PMC free article] [PubMed] [Google Scholar]
  6. Church G. M., Gilbert W. Genomic sequencing. Proc Natl Acad Sci U S A. 1984 Apr;81(7):1991–1995. doi: 10.1073/pnas.81.7.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Ellison J., Buxbaum J., Hood L. Nucleotide sequence of a human immunoglobulin C gamma 4 gene. DNA. 1981;1(1):11–18. doi: 10.1089/dna.1.1981.1.11. [DOI] [PubMed] [Google Scholar]
  8. Flanagan J. G., Rabbitts T. H. Arrangement of human immunoglobulin heavy chain constant region genes implies evolutionary duplication of a segment containing gamma, epsilon and alpha genes. Nature. 1982 Dec 23;300(5894):709–713. doi: 10.1038/300709a0. [DOI] [PubMed] [Google Scholar]
  9. French M. Serum IgG subclasses in normal adults. Monogr Allergy. 1986;19:100–107. [PubMed] [Google Scholar]
  10. Hendriks R. W., van Tol M. J., de Lange G. G., Schuurman R. K. Inheritance of a large deletion within the human immunoglobulin heavy chain constant region gene complex and immunological implications. Scand J Immunol. 1989 May;29(5):535–541. doi: 10.1111/j.1365-3083.1989.tb01156.x. [DOI] [PubMed] [Google Scholar]
  11. Hofker M. H., Walter M. A., Cox D. W. Complete physical map of the human immunoglobulin heavy chain constant region gene complex. Proc Natl Acad Sci U S A. 1989 Jul;86(14):5567–5571. doi: 10.1073/pnas.86.14.5567. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Hu X. Y., Ray P. N., Worton R. G. Mechanisms of tandem duplication in the Duchenne muscular dystrophy gene include both homologous and nonhomologous intrachromosomal recombination. EMBO J. 1991 Sep;10(9):2471–2477. doi: 10.1002/j.1460-2075.1991.tb07786.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  13. Keyeux G., Lefranc G., Lefranc M. P. A multigene deletion in the human IGH constant region locus involves highly homologous hot spots of recombination. Genomics. 1989 Oct;5(3):431–441. doi: 10.1016/0888-7543(89)90006-2. [DOI] [PubMed] [Google Scholar]
  14. Lefranc G., Chaabani H., Van Loghem E., Lefranc M. P., De Lange G., Helal A. N. Simultaneous absence of the human IgG1, IgG2, IgG4 and IgA1 subclasses: immunological and immunogenetical considerations. Eur J Immunol. 1983 Mar;13(3):240–244. doi: 10.1002/eji.1830130312. [DOI] [PubMed] [Google Scholar]
  15. Lefranc M. P., Hammarström L., Smith C. I., Lefranc G. Gene deletions in the human immunoglobulin heavy chain constant region locus: molecular and immunological analysis. Immunodefic Rev. 1991;2(4):265–281. [PubMed] [Google Scholar]
  16. Lefranc M. P., Lefranc G. Human immunoglobulin heavy-chain multigene deletions in healthy individuals. FEBS Lett. 1987 Mar 23;213(2):231–237. doi: 10.1016/0014-5793(87)81496-5. [DOI] [PubMed] [Google Scholar]
  17. Lefranc M. P., Lefranc G., Rabbitts T. H. Inherited deletion of immunoglobulin heavy chain constant region genes in normal human individuals. Nature. 1982 Dec 23;300(5894):760–762. doi: 10.1038/300760a0. [DOI] [PubMed] [Google Scholar]
  18. Lefranc M. P., Lefranc G., de Lange G., Out T. A., van den Broek P. J., van Nieuwkoop J., Radl J., Helal A. N., Chaabani H., van Loghem E. Instability of the human immunoglobulin heavy chain constant region locus indicated by different inherited chromosomal deletions. Mol Biol Med. 1983 Sep;1(2):207–217. [PubMed] [Google Scholar]
  19. Linde A., Söderström R., Smith C. I., Sällberg M., Dahl H., Grubb R., Björkander J., Hammarström L. Herpesvirus serology, aberrant specific immunoglobulin G2 and G3 subclass patterns and Gm allotypes in individuals with low levels of IgG3. Clin Exp Immunol. 1992 Nov;90(2):199–203. [PMC free article] [PubMed] [Google Scholar]
  20. Max E. E., Battey J., Ney R., Kirsch I. R., Leder P. Duplication and deletion in the human immunoglobulin epsilon genes. Cell. 1982 Jun;29(2):691–699. doi: 10.1016/0092-8674(82)90185-4. [DOI] [PubMed] [Google Scholar]
  21. Migone N., Oliviero S., de Lange G., Delacroix D. L., Boschis D., Altruda F., Silengo L., DeMarchi M., Carbonara A. O. Multiple gene deletions within the human immunoglobulin heavy-chain cluster. Proc Natl Acad Sci U S A. 1984 Sep;81(18):5811–5815. doi: 10.1073/pnas.81.18.5811. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Olsson P. G., Hofker M. H., Walter M. A., Smith S., Hammarström L., Smith C. I., Cox D. W. Ig H chain variable and C region genes in common variable immunodeficiency. Characterization of two new deletion haplotypes. J Immunol. 1991 Oct 15;147(8):2540–2546. [PubMed] [Google Scholar]
  23. Poustka A., Pohl T. M., Barlow D. P., Frischauf A. M., Lehrach H. Construction and use of human chromosome jumping libraries from NotI-digested DNA. Nature. 1987 Jan 22;325(6102):353–355. doi: 10.1038/325353a0. [DOI] [PubMed] [Google Scholar]
  24. Smith C. I., Hammarström L., Henter J. I., de Lange G. G. Molecular and serologic analysis of IgG1 deficiency caused by new forms of the constant region of the Ig H chain gene deletions. J Immunol. 1989 Jun 15;142(12):4514–4519. [PubMed] [Google Scholar]
  25. Takahashi N., Ueda S., Obata M., Nikaido T., Nakai S., Honjo T. Structure of human immunoglobulin gamma genes: implications for evolution of a gene family. Cell. 1982 Jun;29(2):671–679. doi: 10.1016/0092-8674(82)90183-0. [DOI] [PubMed] [Google Scholar]
  26. Wahls W. P., Wallace L. J., Moore P. D. The Z-DNA motif d(TG)30 promotes reception of information during gene conversion events while stimulating homologous recombination in human cells in culture. Mol Cell Biol. 1990 Feb;10(2):785–793. doi: 10.1128/mcb.10.2.785. [DOI] [PMC free article] [PubMed] [Google Scholar]
  27. Walter M. A., Chambers C. A., Zimmerman B., Cox D. W. A multigene deletion in the immunoglobulin heavy chain region in a highly atopic individual. Hum Genet. 1990 Oct;85(6):643–647. doi: 10.1007/BF00193590. [DOI] [PubMed] [Google Scholar]

Articles from Clinical and Experimental Immunology are provided here courtesy of British Society for Immunology

RESOURCES