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- Adamska I., Scheel B., Kloppstech K. Circadian oscillations of nuclear-encoded chloroplast proteins in pea (Pisum sativum). Plant Mol Biol. 1991 Nov;17(5):1055–1065. doi: 10.1007/BF00037144. [DOI] [PubMed] [Google Scholar]
- Ahmad M., Cashmore A. R. HY4 gene of A. thaliana encodes a protein with characteristics of a blue-light photoreceptor. Nature. 1993 Nov 11;366(6451):162–166. doi: 10.1038/366162a0. [DOI] [PubMed] [Google Scholar]
- Ahmad M., Cashmore A. R. The pef mutants of Arabidopsis thaliana define lesions early in the phytochrome signaling pathway. Plant J. 1996 Dec;10(6):1103–1110. doi: 10.1046/j.1365-313x.1996.10061103.x. [DOI] [PubMed] [Google Scholar]
- Apel K., Kloppstech K. The plastid membranes of barley (Hordeum vulgare). Light-induced appearance of mRNA coding for the apoprotein of the light-harvesting chlorophyll a/b protein. Eur J Biochem. 1978 Apr 17;85(2):581–588. doi: 10.1111/j.1432-1033.1978.tb12273.x. [DOI] [PubMed] [Google Scholar]
- Aronson B. D., Johnson K. A., Loros J. J., Dunlap J. C. Negative feedback defining a circadian clock: autoregulation of the clock gene frequency. Science. 1994 Mar 18;263(5153):1578–1584. doi: 10.1126/science.8128244. [DOI] [PubMed] [Google Scholar]
- Assmann S. M., Haubrick L. L. Transport proteins of the plant plasma membrane. Curr Opin Cell Biol. 1996 Aug;8(4):458–467. doi: 10.1016/s0955-0674(96)80021-4. [DOI] [PubMed] [Google Scholar]
- Beator J., Kloppstech K. Significance of circadian gene expression in higher plants. Chronobiol Int. 1996 Nov;13(5):319–339. doi: 10.3109/07420529609012657. [DOI] [PubMed] [Google Scholar]
- Beator J., Kloppstech K. The Circadian Oscillator Coordinates the Synthesis of Apoproteins and Their Pigments during Chloroplast Development. Plant Physiol. 1993 Sep;103(1):191–196. doi: 10.1104/pp.103.1.191. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Bougri O., Grimm B. Members of a low-copy number gene family encoding glutamyl-tRNA reductase are differentially expressed in barley. Plant J. 1996 Jun;9(6):867–878. doi: 10.1046/j.1365-313x.1996.9060867.x. [DOI] [PubMed] [Google Scholar]
- Bowler C., Neuhaus G., Yamagata H., Chua N. H. Cyclic GMP and calcium mediate phytochrome phototransduction. Cell. 1994 Apr 8;77(1):73–81. doi: 10.1016/0092-8674(94)90236-4. [DOI] [PubMed] [Google Scholar]
- Bowler C., Yamagata H., Neuhaus G., Chua N. H. Phytochrome signal transduction pathways are regulated by reciprocal control mechanisms. Genes Dev. 1994 Sep 15;8(18):2188–2202. doi: 10.1101/gad.8.18.2188. [DOI] [PubMed] [Google Scholar]
- Bruce W. B., Deng X. W., Quail P. H. A negatively acting DNA sequence element mediates phytochrome-directed repression of phyA gene transcription. EMBO J. 1991 Oct;10(10):3015–3024. doi: 10.1002/j.1460-2075.1991.tb07852.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Carpenter C. D., Kreps J. A., Simon A. E. Genes encoding glycine-rich Arabidopsis thaliana proteins with RNA-binding motifs are influenced by cold treatment and an endogenous circadian rhythm. Plant Physiol. 1994 Mar;104(3):1015–1025. doi: 10.1104/pp.104.3.1015. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Carre I. A., Kay S. A. Multiple DNA-Protein Complexes at a Circadian-Regulated Promoter Element. Plant Cell. 1995 Dec;7(12):2039–2051. doi: 10.1105/tpc.7.12.2039. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Chory J. Light modulation of vegetative development. Plant Cell. 1997 Jul;9(7):1225–1234. doi: 10.1105/tpc.9.7.1225. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Crosthwaite S. K., Dunlap J. C., Loros J. J. Neurospora wc-1 and wc-2: transcription, photoresponses, and the origins of circadian rhythmicity. Science. 1997 May 2;276(5313):763–769. doi: 10.1126/science.276.5313.763. [DOI] [PubMed] [Google Scholar]
- Crosthwaite S. K., Loros J. J., Dunlap J. C. Light-induced resetting of a circadian clock is mediated by a rapid increase in frequency transcript. Cell. 1995 Jun 30;81(7):1003–1012. doi: 10.1016/s0092-8674(05)80005-4. [DOI] [PubMed] [Google Scholar]
- Dresselhaus T., Barcelo P., Hagel C., Lörz H., Humbeck K. Isolation and characterization of a Tritordeum cDNA encoding S-adenosylmethionine decarboxylase that is circadian-clock-regulated. Plant Mol Biol. 1996 Mar;30(5):1021–1033. doi: 10.1007/BF00020812. [DOI] [PubMed] [Google Scholar]
- Dunlap J. C. Genetics and molecular analysis of circadian rhythms. Annu Rev Genet. 1996;30:579–601. doi: 10.1146/annurev.genet.30.1.579. [DOI] [PubMed] [Google Scholar]
- Eichacker L. A., Soll J., Lauterbach P., Rüdiger W., Klein R. R., Mullet J. E. In vitro synthesis of chlorophyll a in the dark triggers accumulation of chlorophyll a apoproteins in barley etioplasts. J Biol Chem. 1990 Aug 15;265(23):13566–13571. [PubMed] [Google Scholar]
- Fejes E., Pay A., Kanevsky I., Szell M., Adam E., Kay S., Nagy F. A 268 bp upstream sequence mediates the circadian clock-regulated transcription of the wheat Cab-1 gene in transgenic plants. Plant Mol Biol. 1990 Dec;15(6):921–932. doi: 10.1007/BF00039431. [DOI] [PubMed] [Google Scholar]
- Fujiwara S., Ishida N., Tsuzuki M. Circadian expression of the carbonic anhydrase gene, Cah1, in Chlamydomonas reinhardtii. Plant Mol Biol. 1996 Nov;32(4):745–749. doi: 10.1007/BF00020215. [DOI] [PubMed] [Google Scholar]
- Giuliano G., Hoffman N. E., Ko K., Scolnik P. A., Cashmore A. R. A light-entrained circadian clock controls transcription of several plant genes. EMBO J. 1988 Dec 1;7(12):3635–3642. doi: 10.1002/j.1460-2075.1988.tb03244.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hall J. C. Tripping along the trail to the molecular mechanisms of biological clocks. Trends Neurosci. 1995 May;18(5):230–240. doi: 10.1016/0166-2236(95)93908-g. [DOI] [PubMed] [Google Scholar]
- Hardin P. E., Hall J. C., Rosbash M. Feedback of the Drosophila period gene product on circadian cycling of its messenger RNA levels. Nature. 1990 Feb 8;343(6258):536–540. doi: 10.1038/343536a0. [DOI] [PubMed] [Google Scholar]
- Harper J. F., Sussman M. R., Schaller G. E., Putnam-Evans C., Charbonneau H., Harmon A. C. A calcium-dependent protein kinase with a regulatory domain similar to calmodulin. Science. 1991 May 17;252(5008):951–954. doi: 10.1126/science.1852075. [DOI] [PubMed] [Google Scholar]
- Heintzen C., Melzer S., Fischer R., Kappeler S., Apel K., Staiger D. A light- and temperature-entrained circadian clock controls expression of transcripts encoding nuclear proteins with homology to RNA-binding proteins in meristematic tissue. Plant J. 1994 Jun;5(6):799–813. doi: 10.1046/j.1365-313x.1994.5060799.x. [DOI] [PubMed] [Google Scholar]
- Hennessey T. L., Field C. B. Evidence of multiple circadian oscillators in bean plants. J Biol Rhythms. 1992 Summer;7(2):105–113. doi: 10.1177/074873049200700202. [DOI] [PubMed] [Google Scholar]
- Hicks K. A., Millar A. J., Carré I. A., Somers D. E., Straume M., Meeks-Wagner D. R., Kay S. A. Conditional circadian dysfunction of the Arabidopsis early-flowering 3 mutant. Science. 1996 Nov 1;274(5288):790–792. doi: 10.1126/science.274.5288.790. [DOI] [PubMed] [Google Scholar]
- Hunter-Ensor M., Ousley A., Sehgal A. Regulation of the Drosophila protein timeless suggests a mechanism for resetting the circadian clock by light. Cell. 1996 Mar 8;84(5):677–685. doi: 10.1016/s0092-8674(00)81046-6. [DOI] [PubMed] [Google Scholar]
- Hwang S., Kawazoe R., Herrin D. L. Transcription of tufA and other chloroplast-encoded genes is controlled by a circadian clock in Chlamydomonas. Proc Natl Acad Sci U S A. 1996 Feb 6;93(3):996–1000. doi: 10.1073/pnas.93.3.996. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kay S. A. PAS, present, and future: clues to the origins of circadian clocks. Science. 1997 May 2;276(5313):753–754. doi: 10.1126/science.276.5313.753. [DOI] [PubMed] [Google Scholar]
- Kim H. Y., Coté G. G., Crain R. C. Effects of Light on the Membrane Potential of Protoplasts from Samanea saman Pulvini : Involvement of K Channels and the H -ATPase. Plant Physiol. 1992 Aug;99(4):1532–1539. doi: 10.1104/pp.99.4.1532. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kim H. Y., Coté G. G., Crain R. C. Potassium Channels in Samanea saman Protoplasts Controlled by Phytochrome and the Biological Clock. Science. 1993 May 14;260(5110):960–962. doi: 10.1126/science.260.5110.960. [DOI] [PubMed] [Google Scholar]
- Kim J., Eichacker L. A., Rudiger W., Mullet J. E. Chlorophyll regulates accumulation of the plastid-encoded chlorophyll proteins P700 and D1 by increasing apoprotein stability. Plant Physiol. 1994 Mar;104(3):907–916. doi: 10.1104/pp.104.3.907. [DOI] [PMC free article] [PubMed] [Google Scholar]
- King D. P., Zhao Y., Sangoram A. M., Wilsbacher L. D., Tanaka M., Antoch M. P., Steeves T. D., Vitaterna M. H., Kornhauser J. M., Lowrey P. L. Positional cloning of the mouse circadian clock gene. Cell. 1997 May 16;89(4):641–653. doi: 10.1016/s0092-8674(00)80245-7. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kinoshita T., Nishimura M., Shimazaki Ki. Cytosolic Concentration of Ca2+ Regulates the Plasma Membrane H+-ATPase in Guard Cells of Fava Bean. Plant Cell. 1995 Aug;7(8):1333–1342. doi: 10.1105/tpc.7.8.1333. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kreps J. A., Simon A. E. Environmental and genetic effects on circadian clock-regulated gene expression in Arabidopsis. Plant Cell. 1997 Mar;9(3):297–304. doi: 10.1105/tpc.9.3.297. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kyriacou C. P. Clock research perring along: it's about time! Trends Genet. 1994 Mar;10(3):69–71. doi: 10.1016/0168-9525(94)90218-6. [DOI] [PubMed] [Google Scholar]
- Lam H. M., Peng S. S., Coruzzi G. M. Metabolic regulation of the gene encoding glutamine-dependent asparagine synthetase in Arabidopsis thaliana. Plant Physiol. 1994 Dec;106(4):1347–1357. doi: 10.1104/pp.106.4.1347. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Linden H., Macino G. White collar 2, a partner in blue-light signal transduction, controlling expression of light-regulated genes in Neurospora crassa. EMBO J. 1997 Jan 2;16(1):98–109. doi: 10.1093/emboj/16.1.98. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Liscum E., Briggs W. R. Mutations in the NPH1 locus of Arabidopsis disrupt the perception of phototropic stimuli. Plant Cell. 1995 Apr;7(4):473–485. doi: 10.1105/tpc.7.4.473. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Liu Z., Taub C. C., McClung C. R. Identification of an Arabidopsis thaliana ribulose-1,5-bisphosphate carboxylase/oxygenase activase (RCA) minimal promoter regulated by light and the circadian clock. Plant Physiol. 1996 Sep;112(1):43–51. doi: 10.1104/pp.112.1.43. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Martino-Catt S., Ort D. R. Low temperature interrupts circadian regulation of transcriptional activity in chilling-sensitive plants. Proc Natl Acad Sci U S A. 1992 May 1;89(9):3731–3735. doi: 10.1073/pnas.89.9.3731. [DOI] [PMC free article] [PubMed] [Google Scholar]
- McClung C. R., Fox B. A., Dunlap J. C. The Neurospora clock gene frequency shares a sequence element with the Drosophila clock gene period. Nature. 1989 Jun 15;339(6225):558–562. doi: 10.1038/339558a0. [DOI] [PubMed] [Google Scholar]
- Memon A. R., Hwang S., Deshpande N., Thompson G. A., Jr, Herrin D. L. Novel aspects of the regulation of a cDNA (Arf1) from Chlamydomonas with high sequence identity to animal ADP-ribosylation factor 1. Plant Mol Biol. 1995 Nov;29(3):567–577. doi: 10.1007/BF00020985. [DOI] [PubMed] [Google Scholar]
- Millar A. J., Carré I. A., Strayer C. A., Chua N. H., Kay S. A. Circadian clock mutants in Arabidopsis identified by luciferase imaging. Science. 1995 Feb 24;267(5201):1161–1163. doi: 10.1126/science.7855595. [DOI] [PubMed] [Google Scholar]
- Millar A. J., Short S. R., Chua N. H., Kay S. A. A novel circadian phenotype based on firefly luciferase expression in transgenic plants. Plant Cell. 1992 Sep;4(9):1075–1087. doi: 10.1105/tpc.4.9.1075. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mittag M., Lee D. H., Hastings J. W. Circadian expression of the luciferin-binding protein correlates with the binding of a protein to the 3' untranslated region of its mRNA. Proc Natl Acad Sci U S A. 1994 Jun 7;91(12):5257–5261. doi: 10.1073/pnas.91.12.5257. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Nakashima H. Calcium Inhibits Phase Shifting of the Circadian Conidiation Rhythm of Neurospora crassa by the Calcium Ionophore A23187. Plant Physiol. 1984 Feb;74(2):268–271. doi: 10.1104/pp.74.2.268. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Neuhaus G., Bowler C., Kern R., Chua N. H. Calcium/calmodulin-dependent and -independent phytochrome signal transduction pathways. Cell. 1993 Jun 4;73(5):937–952. doi: 10.1016/0092-8674(93)90272-r. [DOI] [PubMed] [Google Scholar]
- Parks B. M., Quail P. H. Phytochrome-Deficient hy1 and hy2 Long Hypocotyl Mutants of Arabidopsis Are Defective in Phytochrome Chromophore Biosynthesis. Plant Cell. 1991 Nov;3(11):1177–1186. doi: 10.1105/tpc.3.11.1177. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Pei Z. M., Ward J. M., Harper J. F., Schroeder J. I. A novel chloride channel in Vicia faba guard cell vacuoles activated by the serine/threonine kinase, CDPK. EMBO J. 1996 Dec 2;15(23):6564–6574. [PMC free article] [PubMed] [Google Scholar]
- Pilgrim M. L., Caspar T., Quail P. H., McClung C. R. Circadian and light-regulated expression of nitrate reductase in Arabidopsis. Plant Mol Biol. 1993 Oct;23(2):349–364. doi: 10.1007/BF00029010. [DOI] [PubMed] [Google Scholar]
- Pittendrigh C. S. Temporal organization: reflections of a Darwinian clock-watcher. Annu Rev Physiol. 1993;55:16–54. doi: 10.1146/annurev.ph.55.030193.000313. [DOI] [PubMed] [Google Scholar]
- Redinbaugh M. G., Sabre M., Scandalios J. G. Expression of the maize Cat3 catalase gene is under the influence of a circadian rhythm. Proc Natl Acad Sci U S A. 1990 Sep;87(17):6853–6857. doi: 10.1073/pnas.87.17.6853. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Rensing L., Monnerjahn C. Heat shock proteins and circadian rhythms. Chronobiol Int. 1996 Oct;13(4):239–250. doi: 10.3109/07420529609020904. [DOI] [PubMed] [Google Scholar]
- Rikin A., Dillwith J. W., Bergman D. K. Correlation between the Circadian Rhythm of Resistance to Extreme Temperatures and Changes in Fatty Acid Composition in Cotton Seedlings. Plant Physiol. 1993 Jan;101(1):31–36. doi: 10.1104/pp.101.1.31. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Sander L., Jensen P. E., Back L. F., Stummann B. M., Henningsen K. W. Structure and expression of a nitrite reductase gene from bean (Phaseolus vulgaris) and promoter analysis in transgenic tobacco. Plant Mol Biol. 1995 Jan;27(1):165–177. doi: 10.1007/BF00019188. [DOI] [PubMed] [Google Scholar]
- Sehgal A., Rothenfluh-Hilfiker A., Hunter-Ensor M., Chen Y., Myers M. P., Young M. W. Rhythmic expression of timeless: a basis for promoting circadian cycles in period gene autoregulation. Science. 1995 Nov 3;270(5237):808–810. doi: 10.1126/science.270.5237.808. [DOI] [PubMed] [Google Scholar]
- Shimazaki K., Kinoshita T., Nishimura M. Involvement of Calmodulin and Calmodulin-Dependent Myosin Light Chain Kinase in Blue Light-Dependent H Pumping by Guard Cell Protoplasts from Vicia faba L. Plant Physiol. 1992 Aug;99(4):1416–1421. doi: 10.1104/pp.99.4.1416. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Simon E., Satter R. L., Galston A. W. Circadian Rhythmicity in Excised Samanea Pulvini: II. Resetting the Clock by Phytochrome Conversion. Plant Physiol. 1976 Sep;58(3):421–425. doi: 10.1104/pp.58.3.421. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Takahashi J. S. Circadian-clock regulation of gene expression. Curr Opin Genet Dev. 1993 Apr;3(2):301–309. doi: 10.1016/0959-437x(93)90038-q. [DOI] [PubMed] [Google Scholar]
- Tamponnet C., Edmunds L. N. Entrainment and Phase-Shifting of the Circadian Rhythm of Cell Division by Calcium in Synchronous Cultures of the Wild-Type Z Strain and of the ZC Achlorophyllous Mutant of Euglena gracilis. Plant Physiol. 1990 Jun;93(2):425–431. doi: 10.1104/pp.93.2.425. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Trewavas A. J., Malho R. Signal Perception and Transduction: The Origin of the Phenotype. Plant Cell. 1997 Jul;9(7):1181–1195. doi: 10.1105/tpc.9.7.1181. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wang Z. Y., Kenigsbuch D., Sun L., Harel E., Ong M. S., Tobin E. M. A Myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene. Plant Cell. 1997 Apr;9(4):491–507. doi: 10.1105/tpc.9.4.491. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wu W. H., Assmann S. M. A membrane-delimited pathway of G-protein regulation of the guard-cell inward K+ channel. Proc Natl Acad Sci U S A. 1994 Jul 5;91(14):6310–6314. doi: 10.1073/pnas.91.14.6310. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Zhong H. H., McClung C. R. The circadian clock gates expression of two Arabidopsis catalase genes to distinct and opposite circadian phases. Mol Gen Genet. 1996 May 23;251(2):196–203. doi: 10.1007/BF02172918. [DOI] [PubMed] [Google Scholar]
- Zhong H. H., Young J. C., Pease E. A., Hangarter R. P., McClung C. R. Interactions between Light and the Circadian Clock in the Regulation of CAT2 Expression in Arabidopsis. Plant Physiol. 1994 Mar;104(3):889–898. doi: 10.1104/pp.104.3.889. [DOI] [PMC free article] [PubMed] [Google Scholar]