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American Journal of Human Genetics logoLink to American Journal of Human Genetics
. 1992 Dec;51(6):1366–1371.

Genetic mapping of the human tryptophan hydroxylase gene on chromosome 11, using an intronic conformational polymorphism.

D A Nielsen 1, M Dean 1, D Goldman 1
PMCID: PMC1682899  PMID: 1463016

Abstract

The identification of polymorphic alleles at loci coding for functional genes is crucial for genetic association and linkage studies. Since the tryptophan hydroxylase (TPH) gene codes for the rate-limiting enzyme in the biosynthesis of the neurotransmitter serotonin, it would be advantageous to identify a polymorphism in this gene. By examining introns of the human TPH gene by PCR amplification and analysis by the single-strand conformational polymorphism (SSCP) technique, an SSCP was revealed with two alleles that occur with frequencies of .40 and .60 in unrelated Caucasians. DNAs from 24 informative CEPH families were typed for the TPH intron polymorphism and analyzed with respect to 10 linked markers on chromosome 11, between p13 and p15, with the result that TPH was placed between D11S151 and D11S134. This region contains loci for several important genes, including those for Beckwith-Wiedemann syndrome and tyrosine hydroxylase.

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Selected References

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  1. Barton D. E., Kwon B. S., Francke U. Human tyrosinase gene, mapped to chromosome 11 (q14----q21), defines second region of homology with mouse chromosome 7. Genomics. 1988 Jul;3(1):17–24. doi: 10.1016/0888-7543(88)90153-x. [DOI] [PubMed] [Google Scholar]
  2. Boularand S., Darmon M. C., Ganem Y., Launay J. M., Mallet J. Complete coding sequence of human tryptophan hydroxylase. Nucleic Acids Res. 1990 Jul 25;18(14):4257–4257. doi: 10.1093/nar/18.14.4257. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. COOPER J. R., MELCER I. The enzymic oxidation of tryptophan to 5-hydroxytryptophan in the biosynthesis of serotonin. J Pharmacol Exp Ther. 1961 Jun;132:265–268. [PubMed] [Google Scholar]
  4. Cetin Y. Biogenic amines in the guinea pig endocrine pancreas. Life Sci. 1992;50(18):1343–1350. doi: 10.1016/0024-3205(92)90285-w. [DOI] [PubMed] [Google Scholar]
  5. Ciaranello R. D., Ciaranello A. L. Genetics of major psychiatric disorders. Annu Rev Med. 1991;42:151–158. doi: 10.1146/annurev.me.42.020191.001055. [DOI] [PubMed] [Google Scholar]
  6. Craig S. P., Boularand S., Darmon M. C., Mallet J., Craig I. W. Localization of human tryptophan hydroxylase (TPH) to chromosome 11p15.3----p14 by in situ hybridization. Cytogenet Cell Genet. 1991;56(3-4):157–159. doi: 10.1159/000133075. [DOI] [PubMed] [Google Scholar]
  7. Craig S. P., Buckle V. J., Lamouroux A., Mallet J., Craig I. Localization of the human tyrosine hydroxylase gene to 11p15: gene duplication and evolution of metabolic pathways. Cytogenet Cell Genet. 1986;42(1-2):29–32. doi: 10.1159/000132246. [DOI] [PubMed] [Google Scholar]
  8. Dausset J., Cann H., Cohen D., Lathrop M., Lalouel J. M., White R. Centre d'etude du polymorphisme humain (CEPH): collaborative genetic mapping of the human genome. Genomics. 1990 Mar;6(3):575–577. doi: 10.1016/0888-7543(90)90491-c. [DOI] [PubMed] [Google Scholar]
  9. Dean M., White M. B., Amos J., Gerrard B., Stewart C., Khaw K. T., Leppert M. Multiple mutations in highly conserved residues are found in mildly affected cystic fibrosis patients. Cell. 1990 Jun 1;61(5):863–870. doi: 10.1016/0092-8674(90)90196-l. [DOI] [PubMed] [Google Scholar]
  10. Egeland J. A., Gerhard D. S., Pauls D. L., Sussex J. N., Kidd K. K., Allen C. R., Hostetter A. M., Housman D. E. Bipolar affective disorders linked to DNA markers on chromosome 11. 1987 Feb 26-Mar 4Nature. 325(6107):783–787. doi: 10.1038/325783a0. [DOI] [PubMed] [Google Scholar]
  11. Finocchiaro L. M., Nahmod V. E., Launay J. M. Melatonin biosynthesis and metabolism in peripheral blood mononuclear leucocytes. Biochem J. 1991 Dec 15;280(Pt 3):727–731. doi: 10.1042/bj2800727. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Gershon M. D. The enteric nervous system. Annu Rev Neurosci. 1981;4:227–272. doi: 10.1146/annurev.ne.04.030181.001303. [DOI] [PubMed] [Google Scholar]
  13. Grahame-Smith D. G. Tryptophan hydroxylation in brain. Biochem Biophys Res Commun. 1964 Aug 11;16(6):586–592. doi: 10.1016/0006-291x(64)90197-4. [DOI] [PubMed] [Google Scholar]
  14. Grenett H. E., Ledley F. D., Reed L. L., Woo S. L. Full-length cDNA for rabbit tryptophan hydroxylase: functional domains and evolution of aromatic amino acid hydroxylases. Proc Natl Acad Sci U S A. 1987 Aug;84(16):5530–5534. doi: 10.1073/pnas.84.16.5530. [DOI] [PMC free article] [PubMed] [Google Scholar]
  15. Henry I., Jeanpierre M., Couillin P., Barichard F., Serre J. L., Journel H., Lamouroux A., Turleau C., de Grouchy J., Junien C. Molecular definition of the 11p15.5 region involved in Beckwith-Wiedemann syndrome and probably in predisposition to adrenocortical carcinoma. Hum Genet. 1989 Feb;81(3):273–277. doi: 10.1007/BF00279003. [DOI] [PubMed] [Google Scholar]
  16. Jequier E., Robinson D. S., Lovenberg W., Sjoerdsma A. Further studies on tryptophan hydroxylase in rat brainstem and beef pineal. Biochem Pharmacol. 1969 May;18(5):1071–1081. doi: 10.1016/0006-2952(69)90111-7. [DOI] [PubMed] [Google Scholar]
  17. Joh T. H., Shikimi T., Pickel V. M., Reis D. J. Brain tryptophan hydroxylase: purification of, production of antibodies to, and cellular and ultrastructural localization in serotonergic neurons of rat midbrain. Proc Natl Acad Sci U S A. 1975 Sep;72(9):3575–3579. doi: 10.1073/pnas.72.9.3575. [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. Kim K. S., Wessel T. C., Stone D. M., Carver C. H., Joh T. H., Park D. H. Molecular cloning and characterization of cDNA encoding tryptophan hydroxylase from rat central serotonergic neurons. Brain Res Mol Brain Res. 1991 Mar;9(4):277–283. doi: 10.1016/0169-328x(91)90073-7. [DOI] [PubMed] [Google Scholar]
  19. Koufos A., Grundy P., Morgan K., Aleck K. A., Hadro T., Lampkin B. C., Kalbakji A., Cavenee W. K. Familial Wiedemann-Beckwith syndrome and a second Wilms tumor locus both map to 11p15.5. Am J Hum Genet. 1989 May;44(5):711–719. [PMC free article] [PubMed] [Google Scholar]
  20. Lander E. S., Green P., Abrahamson J., Barlow A., Daly M. J., Lincoln S. E., Newberg L. A., Newburg L. MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics. 1987 Oct;1(2):174–181. doi: 10.1016/0888-7543(87)90010-3. [DOI] [PubMed] [Google Scholar]
  21. Lathrop G. M., Lalouel J. M., Julier C., Ott J. Strategies for multilocus linkage analysis in humans. Proc Natl Acad Sci U S A. 1984 Jun;81(11):3443–3446. doi: 10.1073/pnas.81.11.3443. [DOI] [PMC free article] [PubMed] [Google Scholar]
  22. Ledley F. D., DiLella A. G., Kwok S. C., Woo S. L. Homology between phenylalanine and tyrosine hydroxylases reveals common structural and functional domains. Biochemistry. 1985 Jul 2;24(14):3389–3394. doi: 10.1021/bi00335a001. [DOI] [PubMed] [Google Scholar]
  23. Ledley F. D., Grenett H. E., Bartos D. P., van Tuinen P., Ledbetter D. H., Woo S. L. Assignment of human tryptophan hydroxylase locus to chromosome 11: gene duplication and translocation in evolution of aromatic amino acid hydroxylases. Somat Cell Mol Genet. 1987 Sep;13(5):575–580. doi: 10.1007/BF01534499. [DOI] [PubMed] [Google Scholar]
  24. Lidsky A. S., Law M. L., Morse H. G., Kao F. T., Rabin M., Ruddle F. H., Woo S. L. Regional mapping of the phenylalanine hydroxylase gene and the phenylketonuria locus in the human genome. Proc Natl Acad Sci U S A. 1985 Sep;82(18):6221–6225. doi: 10.1073/pnas.82.18.6221. [DOI] [PMC free article] [PubMed] [Google Scholar]
  25. Lovenberg W., Jequier E., Sjoerdsma A. Tryptophan hydroxylation: measurement in pineal gland, brainstem, and carcinoid tumor. Science. 1967 Jan 13;155(3759):217–219. doi: 10.1126/science.155.3759.217. [DOI] [PubMed] [Google Scholar]
  26. Moss P. A., Davies K. E., Boni C., Mallet J., Reeders S. T. Linkage of tyrosine hydroxylase to four other markers on the short arm of chromosome 11. Nucleic Acids Res. 1986 Dec 22;14(24):9927–9932. doi: 10.1093/nar/14.24.9927. [DOI] [PMC free article] [PubMed] [Google Scholar]
  27. O'Malley K. L., Rotwein P. Human tyrosine hydroxylase and insulin genes are contiguous on chromosome 11. Nucleic Acids Res. 1988 May 25;16(10):4437–4446. [PMC free article] [PubMed] [Google Scholar]
  28. Orita M., Suzuki Y., Sekiya T., Hayashi K. Rapid and sensitive detection of point mutations and DNA polymorphisms using the polymerase chain reaction. Genomics. 1989 Nov;5(4):874–879. doi: 10.1016/0888-7543(89)90129-8. [DOI] [PubMed] [Google Scholar]
  29. Pakstis A. J., Kidd J. R., Castiglione C. M., Kidd K. K. Status of the search for a major genetic locus for affective disorder in the Old Order Amish. Hum Genet. 1991 Aug;87(4):475–483. doi: 10.1007/BF00197172. [DOI] [PubMed] [Google Scholar]
  30. Ping A. J., Reeve A. E., Law D. J., Young M. R., Boehnke M., Feinberg A. P. Genetic linkage of Beckwith-Wiedemann syndrome to 11p15. Am J Hum Genet. 1989 May;44(5):720–723. [PMC free article] [PubMed] [Google Scholar]
  31. Saiki R. K., Gelfand D. H., Stoffel S., Scharf S. J., Higuchi R., Horn G. T., Mullis K. B., Erlich H. A. Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science. 1988 Jan 29;239(4839):487–491. doi: 10.1126/science.2448875. [DOI] [PubMed] [Google Scholar]
  32. Steinbusch H. W. Distribution of serotonin-immunoreactivity in the central nervous system of the rat-cell bodies and terminals. Neuroscience. 1981;6(4):557–618. doi: 10.1016/0306-4522(81)90146-9. [DOI] [PubMed] [Google Scholar]
  33. Stoll J., Goldman D. Isolation and structural characterization of the murine tryptophan hydroxylase gene. J Neurosci Res. 1991 Apr;28(4):457–465. doi: 10.1002/jnr.490280402. [DOI] [PubMed] [Google Scholar]
  34. Stoll J., Kozak C. A., Goldman D. Characterization and chromosomal mapping of a cDNA encoding tryptophan hydroxylase from a mouse mastocytoma cell line. Genomics. 1990 May;7(1):88–96. doi: 10.1016/0888-7543(90)90522-v. [DOI] [PubMed] [Google Scholar]

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