Skip to main content
American Journal of Human Genetics logoLink to American Journal of Human Genetics
. 1990 Jul;47(1):28–36.

Mapping autosomal recessive vitamin D dependency type I to chromosome 12q14 by linkage analysis.

M Labuda 1, K Morgan 1, F H Glorieux 1
PMCID: PMC1683762  PMID: 1971995

Abstract

Linkage analysis in French-Canadian families with vitamin D dependency type I (VDD1) demonstrated that the gene responsible for the disease is linked to polymorphic RFLP markers in the 12q14 region. We studied 76 subjects in 14 sibships which included 17 affected individuals and 17 obligate heterozygotes. Significant results for linkage were obtained with the D12S17 locus at the male recombination fraction (theta m) .018 (Z[theta m theta f] = 3.20) and with D126 at (theta m = .025 (Z[theta m theta f] = 3.07). Multipoint linkage analysis and studies of haplotypes and recombinants strongly suggest the localization of the VDD1 locus between the collagen type II alpha 1 (COL2A1) locus and clustered loci D12S14, D12S17, and D12S6, which segregate as a three-marker haplotype. Linkage disequilibrium between VDD1 and this three-marker haplotype supports the notion of a founder effect in the studied population. The current status of the localization of the disease allows for carrier detection in the families at risk.

Full text

PDF
31

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Barker D., McCoy M., Weinberg R., Goldfarb M., Wigler M., Burt R., Gardner E., White R. A test of the role of two oncogenes in inherited predisposition to colon cancer. Mol Biol Med. 1983 Sep;1(2):199–206. [PubMed] [Google Scholar]
  2. Bort R. E., Crivello J. F. Characterization of monoclonal antibodies specific to bovine renal vitamin D hydroxylases. Endocrinology. 1988 Nov;123(5):2491–2498. doi: 10.1210/endo-123-5-2491. [DOI] [PubMed] [Google Scholar]
  3. Botstein D., White R. L., Skolnick M., Davis R. W. Construction of a genetic linkage map in man using restriction fragment length polymorphisms. Am J Hum Genet. 1980 May;32(3):314–331. [PMC free article] [PubMed] [Google Scholar]
  4. Buroker N. E., Magenis R. E., Weliky K., Bruns G., Litt M. Four restriction fragment length polymorphisms revealed by probes from a single cosmid map to human chromosome 12q. Hum Genet. 1986 Jan;72(1):86–94. doi: 10.1007/BF00278825. [DOI] [PubMed] [Google Scholar]
  5. Delvin E. E., Glorieux F. H., Marie P. J., Pettifor J. M. Vitamin D dependency: replacement therapy with calcitriol? J Pediatr. 1981 Jul;99(1):26–34. doi: 10.1016/s0022-3476(81)80952-3. [DOI] [PubMed] [Google Scholar]
  6. Feinberg A. P., Vogelstein B. "A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity". Addendum. Anal Biochem. 1984 Feb;137(1):266–267. doi: 10.1016/0003-2697(84)90381-6. [DOI] [PubMed] [Google Scholar]
  7. Ghazarian J. G., DeLuca H. F. 25-Hydroxycholecalciferol-1-hydroxylase: a specific requirement for NADPH and a hemoprotein component in chick kidney mitochondria. Arch Biochem Biophys. 1974 Jan;160(1):63–72. doi: 10.1016/s0003-9861(74)80009-3. [DOI] [PubMed] [Google Scholar]
  8. Ghazarian J. G., Jefcoate C. R., Knutson J. C., Orme-Johnson W. H., DeLuca H. F. Mitochondrial cytochrome p450. A component of chick kidney 25-hydrocholecalciferol-1alpha-hydroxylase. J Biol Chem. 1974 May 25;249(10):3026–3033. [PubMed] [Google Scholar]
  9. Gustafson S., Proper J. A., Bowie E. J., Sommer S. S. Parameters affecting the yield of DNA from human blood. Anal Biochem. 1987 Sep;165(2):294–299. doi: 10.1016/0003-2697(87)90272-7. [DOI] [PubMed] [Google Scholar]
  10. Hughes M. R., Malloy P. J., Kieback D. G., Kesterson R. A., Pike J. W., Feldman D., O'Malley B. W. Point mutations in the human vitamin D receptor gene associated with hypocalcemic rickets. Science. 1988 Dec 23;242(4886):1702–1705. doi: 10.1126/science.2849209. [DOI] [PubMed] [Google Scholar]
  11. Lander E. S., Botstein D. Mapping complex genetic traits in humans: new methods using a complete RFLP linkage map. Cold Spring Harb Symp Quant Biol. 1986;51(Pt 1):49–62. doi: 10.1101/sqb.1986.051.01.007. [DOI] [PubMed] [Google Scholar]
  12. Lathrop G. M., Lalouel J. M. Efficient computations in multilocus linkage analysis. Am J Hum Genet. 1988 Mar;42(3):498–505. [PMC free article] [PubMed] [Google Scholar]
  13. Lathrop G. M., Lalouel J. M., Julier C., Ott J. Strategies for multilocus linkage analysis in humans. Proc Natl Acad Sci U S A. 1984 Jun;81(11):3443–3446. doi: 10.1073/pnas.81.11.3443. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Law M. L., Tung L., Morse H. G., Berger R., Jones C., Cheah K. S., Solomon E. The human type II collagen gene (COL2A1) assigned to 12q14.3. Ann Hum Genet. 1986 May;50(Pt 2):131–137. doi: 10.1111/j.1469-1809.1986.tb01031.x. [DOI] [PubMed] [Google Scholar]
  15. Morel Y., Picado-Leonard J., Wu D. A., Chang C. Y., Mohandas T. K., Chung B. C., Miller W. L. Assignment of the functional gene for human adrenodoxin to chromosome 11q13----qter and of adrenodoxin pseudogenes to chromosome 20cen----q13.1. Am J Hum Genet. 1988 Jul;43(1):52–59. [PMC free article] [PubMed] [Google Scholar]
  16. Nakamura Y., Ballard L., O'Connell P., Leppert M., Lathrop G. M., Lalouel J. M., White R. Isolation and mapping of a polymorphic DNA sequence pYNH15 on chromosome 12q [D12S17]. Nucleic Acids Res. 1988 Jan 25;16(2):779–779. doi: 10.1093/nar/16.2.779. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Nakamura Y., Fujimoto E., Martin C., O'Connell P., Leppert M., Lathrop G. M., Lalouel J. M., White R. Isolation and mapping of a polymorphic DNA sequence pEFD33.2 on chromosome 12 [D12S14]. Nucleic Acids Res. 1988 Jan 25;16(2):778–778. doi: 10.1093/nar/16.2.778. [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. O'Connell P., Lathrop G. M., Law M., Leppert M., Nakamura Y., Hoff M., Kumlin E., Thomas W., Elsner T., Ballard L. A primary genetic linkage map for human chromosome 12. Genomics. 1987 Sep;1(1):93–102. doi: 10.1016/0888-7543(87)90110-8. [DOI] [PubMed] [Google Scholar]
  19. Oberle J., Mattei M. G., Noguchi T., Birnbaum D. pmcf.2-11, a single copy clone from chromosomal region 12q12-q13.1 [D12S32]. Nucleic Acids Res. 1988 Sep 12;16(17):8749–8749. doi: 10.1093/nar/16.17.8749. [DOI] [PMC free article] [PubMed] [Google Scholar]
  20. PRADER A., ILLIG R., HEIERLI E. [An unusual form of primary vitamin D-resistant rickets with hypocalcemia and autosomal-dominant hereditary transmission: hereditary pseudo-deficiency rickets]. Helv Paediatr Acta. 1961 Dec;16:452–468. [PubMed] [Google Scholar]
  21. Pedersen J. I., Ghazarian J. G., Orme-Johnson N. R., DeLuca H. F. Isolation of chick renal mitochondrial ferredoxin active in the 25-hydroxyvitamin D3-1alpha-hydroxylase system. J Biol Chem. 1976 Jul 10;251(13):3933–3941. [PubMed] [Google Scholar]
  22. Read A. P., Thakker R. V., Davies K. E., Mountford R. C., Brenton D. P., Davies M., Glorieux F., Harris R., Hendy G. N., King A. Mapping of human X-linked hypophosphataemic rickets by multilocus linkage analysis. Hum Genet. 1986 Jul;73(3):267–270. doi: 10.1007/BF00401242. [DOI] [PubMed] [Google Scholar]
  23. Scriver C. R. Vitamin D dependency. Pediatrics. 1970 Mar;45(3):361–363. [PubMed] [Google Scholar]
  24. Sealey P. G., Whittaker P. A., Southern E. M. Removal of repeated sequences from hybridisation probes. Nucleic Acids Res. 1985 Mar 25;13(6):1905–1922. doi: 10.1093/nar/13.6.1905. [DOI] [PMC free article] [PubMed] [Google Scholar]
  25. Solish S. B., Picado-Leonard J., Morel Y., Kuhn R. W., Mohandas T. K., Hanukoglu I., Miller W. L. Human adrenodoxin reductase: two mRNAs encoded by a single gene on chromosome 17cen----q25 are expressed in steroidogenic tissues. Proc Natl Acad Sci U S A. 1988 Oct;85(19):7104–7108. doi: 10.1073/pnas.85.19.7104. [DOI] [PMC free article] [PubMed] [Google Scholar]
  26. Väisänen P., Elima K., Palotie A., Peltonen L., Vuorio E. Polymorphic restriction sites of type II collagen gene: their location and frequencies in the Finnish population. Hum Hered. 1988;38(2):65–71. doi: 10.1159/000153760. [DOI] [PubMed] [Google Scholar]
  27. White R., Lalouel J. M. Investigation of genetic linkage in human families. Adv Hum Genet. 1987;16:121–228. doi: 10.1007/978-1-4757-0620-8_3. [DOI] [PubMed] [Google Scholar]
  28. White R., Leppert M., Bishop D. T., Barker D., Berkowitz J., Brown C., Callahan P., Holm T., Jerominski L. Construction of linkage maps with DNA markers for human chromosomes. Nature. 1985 Jan 10;313(5998):101–105. doi: 10.1038/313101a0. [DOI] [PubMed] [Google Scholar]

Articles from American Journal of Human Genetics are provided here courtesy of American Society of Human Genetics

RESOURCES