Skip to main content
American Journal of Human Genetics logoLink to American Journal of Human Genetics
. 1984 Jan;36(1):177–186.

Estimation of the marker gene frequency and linkage disequilibrium from conditional marker data.

A Chakravarti, C C Li, K H Buetow
PMCID: PMC1684398  PMID: 6320641

Abstract

A method is proposed to calculate the maximum likelihood estimate of gene frequency and linkage disequilibrium from disease-codominant marker conditional data. The method is illustrated using data on sickle-cell anemia and Duchenne muscular dystrophy and linked polymorphic restriction endonuclease cleavage sites.

Full text

PDF
181

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Botstein D., White R. L., Skolnick M., Davis R. W. Construction of a genetic linkage map in man using restriction fragment length polymorphisms. Am J Hum Genet. 1980 May;32(3):314–331. [PMC free article] [PubMed] [Google Scholar]
  2. Chakravarti A. Utility and efficiency of linked marker genes for genetic counseling. III. Proportion of informative families under linkage disequilibrium. Am J Hum Genet. 1983 Jul;35(4):592–610. [PMC free article] [PubMed] [Google Scholar]
  3. Feldenzer J., Mears J. G., Burns A. L., Natta C., Bank A. Heterogeneity of DNA fragments associated with the sickle-globin gene. J Clin Invest. 1979 Sep;64(3):751–755. doi: 10.1172/JCI109519. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Hill W. G. Estimation of linkage disequilibrium in randomly mating populations. Heredity (Edinb) 1974 Oct;33(2):229–239. doi: 10.1038/hdy.1974.89. [DOI] [PubMed] [Google Scholar]
  5. Kan Y. W., Dozy A. M. Evolution of the hemoglobin S and C genes in world populations. Science. 1980 Jul 18;209(4454):388–391. doi: 10.1126/science.7384810. [DOI] [PubMed] [Google Scholar]
  6. Kan Y. W., Dozy A. M. Polymorphism of DNA sequence adjacent to human beta-globin structural gene: relationship to sickle mutation. Proc Natl Acad Sci U S A. 1978 Nov;75(11):5631–5635. doi: 10.1073/pnas.75.11.5631. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Murray J. M., Davies K. E., Harper P. S., Meredith L., Mueller C. R., Williamson R. Linkage relationship of a cloned DNA sequence on the short arm of the X chromosome to Duchenne muscular dystrophy. Nature. 1982 Nov 4;300(5887):69–71. doi: 10.1038/300069a0. [DOI] [PubMed] [Google Scholar]
  8. Nei M., Li W. H. Non-random association between electromorphs and inversion chromosomes in finite populations. Genet Res. 1980 Feb;35(1):65–83. doi: 10.1017/s001667230001394x. [DOI] [PubMed] [Google Scholar]
  9. Nei M. Proportion of informative families for genetic counseling with linked marker genes. Jinrui Idengaku Zasshi. 1979 Sep;24(3):131–142. doi: 10.1007/BF01888684. [DOI] [PubMed] [Google Scholar]
  10. Orkin S. H. Genetic diagnosis of the fetus. Nature. 1982 Mar 18;296(5854):202–203. doi: 10.1038/296202a0. [DOI] [PubMed] [Google Scholar]
  11. Panny S. R., Scott A. F., Smith K. D., Phillips J. A., 3rd, Kazazian H. H., Jr, Talbot C. C., Jr, Boehm C. D. Population heterogeneity of the Hpa I restriction site associated with the beta globin gene: implications for prenatal diagnosis. Am J Hum Genet. 1981 Jan;33(1):25–35. [PMC free article] [PubMed] [Google Scholar]

Articles from American Journal of Human Genetics are provided here courtesy of American Society of Human Genetics

RESOURCES