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British Journal of Cancer logoLink to British Journal of Cancer
. 1996 Feb;73(4):424–428. doi: 10.1038/bjc.1996.76

Deletion mapping on chromosome 1p in well-differentiated gastric cancer.

T Ezaki 1, A Yanagisawa 1, K Ohta 1, S Aiso 1, M Watanabe 1, T Hibi 1, Y Kato 1, T Nakajima 1, T Ariyama 1, J Inazawa 1, Y Nakamura 1, A Horii 1
PMCID: PMC2074468  PMID: 8595154

Abstract

To define the region on the short arm of chromosome 1 that is thought to include one or more tumour-suppressor genes for gastric cancers, we carried out loss of heterozygosity (LOH) studies in 26 gastric adenocarcinomas, using three restriction fragment length polymorphism (RFLP) markers and nine microsatellite markers. All tumours were informative with at least one locus; three revealed replication errors (RERs) at multiple microsatellite loci, and interstitial or telomeric allelic deletions were observed in 12 cases. Deletion mapping of these tumours defined a commonly deleted region between two loci, D1S201 and D1S197, that are 13 cM apart. As two loci within the commonly deleted region, D1S57 (pYNZ2) and D1S62 (pTHI54), were mapped respectively to 1p35 and 1p34.3 by fluorescence in situ hybridisation, we conclude that a locus likely to contain a tumour-suppressor gene for gastric cancer is located within a 13 cM region encompassing two chromosomal bands.

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Selected References

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  1. Bardi G., Pandis N., Fenger C., Kronborg O., Bomme L., Heim S. Deletion of 1p36 as a primary chromosomal aberration in intestinal tumorigenesis. Cancer Res. 1993 Apr 15;53(8):1895–1898. [PubMed] [Google Scholar]
  2. Bièche I., Champème M. H., Matifas F., Cropp C. S., Callahan R., Lidereau R. Two distinct regions involved in 1p deletion in human primary breast cancer. Cancer Res. 1993 May 1;53(9):1990–1994. [PubMed] [Google Scholar]
  3. Deng G. R., Lu Y. Y., Chen S. M., Miao J., Lu G. R., Li H., Cai H., Xu X. L., E Z., Liu P. N. Activated c-Ha-ras oncogene with a guanine to thymine transversion at the twelfth codon in a human stomach cancer cell line. Cancer Res. 1987 Jun 15;47(12):3195–3198. [PubMed] [Google Scholar]
  4. Dracopoli N. C., Bruns G. A., Brodeur G. M., Landes G. M., Matise T. C., Seldin M. F., Vance J. M., Weith A. Report and abstracts of the First International Workshop on Human Chromosome 1 Mapping 1994. Bethesda, Maryland, March 25-27, 1994. Cytogenet Cell Genet. 1994;67(3):144–165. [PubMed] [Google Scholar]
  5. Feinberg A. P., Vogelstein B. "A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity". Addendum. Anal Biochem. 1984 Feb;137(1):266–267. doi: 10.1016/0003-2697(84)90381-6. [DOI] [PubMed] [Google Scholar]
  6. Fong C. T., Dracopoli N. C., White P. S., Merrill P. T., Griffith R. C., Housman D. E., Brodeur G. M. Loss of heterozygosity for the short arm of chromosome 1 in human neuroblastomas: correlation with N-myc amplification. Proc Natl Acad Sci U S A. 1989 May;86(10):3753–3757. doi: 10.1073/pnas.86.10.3753. [DOI] [PMC free article] [PubMed] [Google Scholar]
  7. Goelz S. E., Hamilton S. R., Vogelstein B. Purification of DNA from formaldehyde fixed and paraffin embedded human tissue. Biochem Biophys Res Commun. 1985 Jul 16;130(1):118–126. doi: 10.1016/0006-291x(85)90390-0. [DOI] [PubMed] [Google Scholar]
  8. Han H. J., Yanagisawa A., Kato Y., Park J. G., Nakamura Y. Genetic instability in pancreatic cancer and poorly differentiated type of gastric cancer. Cancer Res. 1993 Nov 1;53(21):5087–5089. [PubMed] [Google Scholar]
  9. Hattori Y., Odagiri H., Nakatani H., Miyagawa K., Naito K., Sakamoto H., Katoh O., Yoshida T., Sugimura T., Terada M. K-sam, an amplified gene in stomach cancer, is a member of the heparin-binding growth factor receptor genes. Proc Natl Acad Sci U S A. 1990 Aug;87(15):5983–5987. doi: 10.1073/pnas.87.15.5983. [DOI] [PMC free article] [PubMed] [Google Scholar]
  10. Holm T., Nakamura Y., Ballard L., Leppert M., O'Connell P., Lathrop G. M., Lalouel J. M., White R. Isolation and mapping of a polymorphic DNA sequence (pTHI54) on chromosome 1p [D1S62]. Nucleic Acids Res. 1988 Apr 11;16(7):3115–3115. doi: 10.1093/nar/16.7.3115. [DOI] [PMC free article] [PubMed] [Google Scholar]
  11. Horii A., Han H. J., Shimada M., Yanagisawa A., Kato Y., Ohta H., Yasui W., Tahara E., Nakamura Y. Frequent replication errors at microsatellite loci in tumors of patients with multiple primary cancers. Cancer Res. 1994 Jul 1;54(13):3373–3375. [PubMed] [Google Scholar]
  12. Horii A., Nakatsuru S., Miyoshi Y., Ichii S., Nagase H., Kato Y., Yanagisawa A., Nakamura Y. The APC gene, responsible for familial adenomatous polyposis, is mutated in human gastric cancer. Cancer Res. 1992 Jun 1;52(11):3231–3233. [PubMed] [Google Scholar]
  13. Inazawa J., Ariyama T., Abe T. Physical ordering of three polymorphic DNA markers spanning the regions containing a tumor suppressor gene of renal cell carcinoma by three-color fluorescent in situ hybridization. Jpn J Cancer Res. 1992 Dec;83(12):1248–1252. doi: 10.1111/j.1349-7006.1992.tb02753.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. Inazawa J., Fukunaga R., Seto Y., Nakagawa H., Misawa S., Abe T., Nagata S. Assignment of the human granulocyte colony-stimulating factor receptor gene (CSF3R) to chromosome 1 at region p35-p34.3. Genomics. 1991 Aug;10(4):1075–1078. doi: 10.1016/0888-7543(91)90202-p. [DOI] [PubMed] [Google Scholar]
  15. Inazawa J., Saito H., Ariyama T., Abe T., Nakamura Y. High-resolution cytogenetic mapping of 342 new cosmid markers including 43 RFLP markers on human chromosome 17 by fluorescence in situ hybridization. Genomics. 1993 Jul;17(1):153–162. doi: 10.1006/geno.1993.1297. [DOI] [PubMed] [Google Scholar]
  16. Kihana T., Tsuda H., Hirota T., Shimosato Y., Sakamoto H., Terada M., Hirohashi S. Point mutation of c-Ki-ras oncogene in gastric adenoma and adenocarcinoma with tubular differentiation. Jpn J Cancer Res. 1991 Mar;82(3):308–314. doi: 10.1111/j.1349-7006.1991.tb01847.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Kuniyasu H., Yasui W., Yokozaki H., Akagi M., Akama Y., Kitahara K., Fujii K., Tahara E. Frequent loss of heterozygosity of the long arm of chromosome 7 is closely associated with progression of human gastric carcinomas. Int J Cancer. 1994 Dec 1;59(5):597–600. doi: 10.1002/ijc.2910590504. [DOI] [PubMed] [Google Scholar]
  18. Leister I., Weith A., Brüderlein S., Cziepluch C., Kangwanpong D., Schlag P., Schwab M. Human colorectal cancer: high frequency of deletions at chromosome 1p35. Cancer Res. 1990 Nov 15;50(22):7232–7235. [PubMed] [Google Scholar]
  19. Loupart M. L., Armour J., Walker R., Adams S., Brammar W., Varley J. Allelic imbalance on chromosome 1 in human breast cancer. I. Minisatellite and RFLP analysis. Genes Chromosomes Cancer. 1995 Jan;12(1):16–23. doi: 10.1002/gcc.2870120104. [DOI] [PubMed] [Google Scholar]
  20. Mathew C. G., Smith B. A., Thorpe K., Wong Z., Royle N. J., Jeffreys A. J., Ponder B. A. Deletion of genes on chromosome 1 in endocrine neoplasia. Nature. 1987 Aug 6;328(6130):524–526. doi: 10.1038/328524a0. [DOI] [PubMed] [Google Scholar]
  21. Moley J. F., Brother M. B., Fong C. T., White P. S., Baylin S. B., Nelkin B., Wells S. A., Brodeur G. M. Consistent association of 1p loss of heterozygosity with pheochromocytomas from patients with multiple endocrine neoplasia type 2 syndromes. Cancer Res. 1992 Feb 15;52(4):770–774. [PubMed] [Google Scholar]
  22. Nakamura Y., Carlson M., Krapcho K., White R. Isolation and mapping of a polymorphic DNA sequence (pMCT58) on chromosome 1p [D1S77]. Nucleic Acids Res. 1988 Oct 11;16(19):9367–9367. doi: 10.1093/nar/16.19.9367. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Nakamura Y., Culver M., Sergeant L., Leppert M., O'Connell P., Lathrop G. M., Lalouel J. M., White R. Isolation and mapping of a polymorphic DNA sequence (pYNZ2) on chromosome 1p [D1S57]. Nucleic Acids Res. 1988 May 25;16(10):4747–4747. doi: 10.1093/nar/16.10.4747. [DOI] [PMC free article] [PubMed] [Google Scholar]
  24. Nakatani H., Sakamoto H., Yoshida T., Yokota J., Tahara E., Sugimura T., Terada M. Isolation of an amplified DNA sequence in stomach cancer. Jpn J Cancer Res. 1990 Aug;81(8):707–710. doi: 10.1111/j.1349-7006.1990.tb02631.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  25. Nakatsuru S., Yanagisawa A., Ichii S., Tahara E., Kato Y., Nakamura Y., Horii A. Somatic mutation of the APC gene in gastric cancer: frequent mutations in very well differentiated adenocarcinoma and signet-ring cell carcinoma. Hum Mol Genet. 1992 Nov;1(8):559–563. doi: 10.1093/hmg/1.8.559. [DOI] [PubMed] [Google Scholar]
  26. Parkin D. M., Lärä E., Muir C. S. Estimates of the worldwide frequency of sixteen major cancers in 1980. Int J Cancer. 1988 Feb 15;41(2):184–197. doi: 10.1002/ijc.2910410205. [DOI] [PubMed] [Google Scholar]
  27. Sano T., Tsujino T., Yoshida K., Nakayama H., Haruma K., Ito H., Nakamura Y., Kajiyama G., Tahara E. Frequent loss of heterozygosity on chromosomes 1q, 5q, and 17p in human gastric carcinomas. Cancer Res. 1991 Jun 1;51(11):2926–2931. [PubMed] [Google Scholar]
  28. Sato T., Tanigami A., Yamakawa K., Akiyama F., Kasumi F., Sakamoto G., Nakamura Y. Allelotype of breast cancer: cumulative allele losses promote tumor progression in primary breast cancer. Cancer Res. 1990 Nov 15;50(22):7184–7189. [PubMed] [Google Scholar]
  29. Schleiermacher G., Peter M., Michon J., Hugot J. P., Vielh P., Zucker J. M., Magdelénat H., Thomas G., Delattre O. Two distinct deleted regions on the short arm of chromosome 1 in neuroblastoma. Genes Chromosomes Cancer. 1994 Aug;10(4):275–281. doi: 10.1002/gcc.2870100409. [DOI] [PubMed] [Google Scholar]
  30. Simon D., Knowles B. B., Weith A. Abnormalities of chromosome 1 and loss of heterozygosity on 1p in primary hepatomas. Oncogene. 1991 May;6(5):765–770. [PubMed] [Google Scholar]
  31. Strickler J. G., Zheng J., Shu Q., Burgart L. J., Alberts S. R., Shibata D. p53 mutations and microsatellite instability in sporadic gastric cancer: when guardians fail. Cancer Res. 1994 Sep 1;54(17):4750–4755. [PubMed] [Google Scholar]
  32. Takahashi E., Hori T., O'Connell P., Leppert M., White R. R-banding and nonisotopic in situ hybridization: precise localization of the human type II collagen gene (COL2A1). Hum Genet. 1990 Nov;86(1):14–16. doi: 10.1007/BF00205165. [DOI] [PubMed] [Google Scholar]
  33. Takeda O., Homma C., Maseki N., Sakurai M., Kanda N., Schwab M., Nakamura Y., Kaneko Y. There may be two tumor suppressor genes on chromosome arm 1p closely associated with biologically distinct subtypes of neuroblastoma. Genes Chromosomes Cancer. 1994 May;10(1):30–39. doi: 10.1002/gcc.2870100106. [DOI] [PubMed] [Google Scholar]
  34. Tamura G., Kihana T., Nomura K., Terada M., Sugimura T., Hirohashi S. Detection of frequent p53 gene mutations in primary gastric cancer by cell sorting and polymerase chain reaction single-strand conformation polymorphism analysis. Cancer Res. 1991 Jun 1;51(11):3056–3058. [PubMed] [Google Scholar]
  35. Uchino S., Tsuda H., Noguchi M., Yokota J., Terada M., Saito T., Kobayashi M., Sugimura T., Hirohashi S. Frequent loss of heterozygosity at the DCC locus in gastric cancer. Cancer Res. 1992 Jun 1;52(11):3099–3102. [PubMed] [Google Scholar]
  36. Weissenbach J., Gyapay G., Dib C., Vignal A., Morissette J., Millasseau P., Vaysseix G., Lathrop M. A second-generation linkage map of the human genome. Nature. 1992 Oct 29;359(6398):794–801. doi: 10.1038/359794a0. [DOI] [PubMed] [Google Scholar]
  37. Weith A., Martinsson T., Cziepluch C., Brüderlein S., Amler L. C., Berthold F., Schwab M. Neuroblastoma consensus deletion maps to 1p36.1-2. Genes Chromosomes Cancer. 1989 Nov;1(2):159–166. doi: 10.1002/gcc.2870010209. [DOI] [PubMed] [Google Scholar]
  38. Yanagisawa A., Kato Y., Ohtake K., Kitagawa T., Ohashi K., Hori M., Takagi K., Sugano H. c-Ki-ras point mutations in ductectatic-type mucinous cystic neoplasms of the pancreas. Jpn J Cancer Res. 1991 Oct;82(10):1057–1060. doi: 10.1111/j.1349-7006.1991.tb01756.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  39. Yeh S. H., Chen P. J., Chen H. L., Lai M. Y., Wang C. C., Chen D. S. Frequent genetic alterations at the distal region of chromosome 1p in human hepatocellular carcinomas. Cancer Res. 1994 Aug 1;54(15):4188–4192. [PubMed] [Google Scholar]
  40. Yokota J., Yamamoto T., Miyajima N., Toyoshima K., Nomura N., Sakamoto H., Yoshida T., Terada M., Sugimura T. Genetic alterations of the c-erbB-2 oncogene occur frequently in tubular adenocarcinoma of the stomach and are often accompanied by amplification of the v-erbA homologue. Oncogene. 1988 Mar;2(3):283–287. [PubMed] [Google Scholar]

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